Pregenerated sensors for CASC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000177640Ensembl transcript IDs: ENST00000414722.5, ENST00000426021.5, ENST00000435944.5, ENST00000439517.2, ENST00000454781.6, ENST00000454857.6, ENST00000614455.4, ENST00000622752.1, ENST00000657543.1, ENST00000665675.1
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGGACGAACGCCGGGCGGGCGGGAGGCGCGGAGGCAGCGGAGGCTaGTCGGCCGCAAGGAGGCAGGCGGGAGGCCAGGGGTGCAGAATT | + |
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Preference number: 5 (lower is better) Translates to: ADERRAGGRRGGSGG*SAARRQAGGQGCRI Trigger: AATTCTGCACCCCTGGCCTCCCGCCTGCCTCCTTGCGGCCGAGCAGCCTCCGCTGCCTCCGCGCCTCCCGCCCGCCCGGCGTTCGTCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414722.5 |
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| CDS GCA 90 bp | CACTGGGCCAGGCCCAAGCAGCATCAAGCCCCGGGTCCCCGCCATTaGGCCCGCGTCGCGCGCCTCCAGTCGCCACGGCAACCAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: HWARPKQHQAPGPRH*ARVARLQSPRQPGR Trigger: CCTCCCTGGTTGCCGTGGCGACTGGAGGCGCGCGACGCGGGCGCAATGGCGGGGACCCGGGGCTTGATGCTGCTTGGGCCTGGCCCAGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435944.5 ENST00000665675.1 |
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| CDS GCA 90 bp | CCCTTCACGTTCCCGAGACCAACATGGAGAAGGCCAACCCGGAAGTaGCGCCGCAGCCGCCCGCCCGGTGTTAGGAGCCGCCGGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: PFTFPRPTWRRPTRK*RRSRPPGVRSRRPG Trigger: GCCCGGCCGGCGGCTCCTAACACCGGGCGGGCGGCTGCGGCGGCACTTCCGGGTTGGCCTTCTCCATGTTGGTCTCGGGAACGTGAAGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435944.5 |
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| CDS CCA 90 bp | CATCTGCCGGCCTCTGCAGGTACCCACGTCCCTAGGACCCGCCACTaGGCCAGGCCCAAGCAGCATCAAGCCCCGGGTCCCCGCCATTGC | + |
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Preference number: 5 (lower is better) Translates to: HLPASAGTHVPRTRH*ARPKQHQAPGPRHC Trigger: GCAATGGCGGGGACCCGGGGCTTGATGCTGCTTGGGCCTGGCCCAGTGGCGGGTCCTAGGGACGTGGGTACCTGCAGAGGCCGGCAGATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000426021.5 ENST00000435944.5 ENST00000454781.6 ENST00000454857.6 ENST00000665675.1 |
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| CDS GCA 90 bp | TCATGTTCACACGGAAACACCGTCCAATGTGCTCTGATCAGCAGCTaGAACATGGCCTTCCCCATGGTGGCAGCTCCAGGGCCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SCSHGNTVQCALISS*NMAFPMVAAPGPPW Trigger: CCAGGGAGGCCCTGGAGCTGCCACCATGGGGAAGGCCATGTTGCAGCTGCTGATCAGAGCACATTGGACGGTGTTTCCGTGTGAACATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 90 bp | AGTGATTCCTTACCATGCGGACCAGCAGTGCTTGTGCTTTGTACCTaGTTCCTAAGGCTGCTGTCCAGGGGGTGCCCTGAGGACCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: SDSLPCGPAVLVLCT*FLRLLSRGCPEDLR Trigger: CCTTAGGTCCTCAGGGCACCCCCTGGACAGCAGCCTTAGGAACCAGGTACAAAGCACAAGCACTGCTGGTCCGCATGGTAAGGAATCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 90 bp | AGGGAAGCCCATGGGAAGGCCCAGTCTGGAAGTGATTCCTTACCATaGGGACCAGCAGTGCTTGTGCTTTGTACCTGGTTCCTAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: REAHGKAQSGSDSLP*GPAVLVLCTWFLRL Trigger: CAGCCTTAGGAACCAGGTACAAAGCACAAGCACTGCTGGTCCGCATGGTAAGGAATCACTTCCAGACTGGGCCTTCCCATGGGCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 90 bp | CAGCATTGTCTTCATGTTCACACGGAAACACCGTCCAATGTGCTCTaGTCAGCAGCTGCAACATGGCCTTCCCCATGGTGGCAGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QHCLHVHTETPSNVL*SAAATWPSPWWQLQ Trigger: CTGGAGCTGCCACCATGGGGAAGGCCATGTTGCAGCTGCTGATCAGAGCACATTGGACGGTGTTTCCGTGTGAACATGAAGACAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS TCA 90 bp | GGAAGCCAATGGAGAGCATGTGCTCAGCATTACGGCCCTGACGGGTaGGGGAGCTGGGGTATTTATGCACCAACTCACATCATCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: GSQWRACAQHYGPDG*GSWGIYAPTHIIIQ Trigger: CTGGATGATGATGTGAGTTGGTGCATAAATACCCCAGCTCCCTCACCCGTCAGGGCCGTAATGCTGAGCACATGCTCTCCATTGGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 90 bp | AGAGGCAGCATTGTCTTCATGTTCACACGGAAACACCGTCCAATGTaGTCTGATCAGCAGCTGCAACATGGCCTTCCCCATGGTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RGSIVFMFTRKHRPM*SDQQLQHGLPHGGS Trigger: GCTGCCACCATGGGGAAGGCCATGTTGCAGCTGCTGATCAGAGCACATTGGACGGTGTTTCCGTGTGAACATGAAGACAATGCTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 90 bp | ATACCTGTTGTTCTCACTTCCCAGAGGTTGTTGCCAGGTACAGCATaGCCACGGGCCCCGGAGAACCATCCAGAACTCACTCTATACCTC | + |
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Preference number: 5 (lower is better) Translates to: IPVVLTSQRLLPGTA*PRAPENHPELTLYL Trigger: GAGGTATAGAGTGAGTTCTGGATGGTTCTCCGGGGCCCGTGGCCATGCTGTACCTGGCAACAACCTCTGGGAAGTGAGAACAACAGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 90 bp | ACTATAATGATACCTTGGGGAAGTTTCTTGTTGTCCTTATGTTTCTaGATCTCCATCGGGGTCGGGAGGAGGAGCCGGGCCGAGCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: TIMIPWGSFLLSLCF*ISIGVGRRSRAEPA Trigger: CGCAGGCTCGGCCCGGCTCCTCCTCCCGACCCCGATGGAGATTCAGAAACATAAGGACAACAAGAAACTTCCCCAAGGTATCATTATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414722.5 |
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| CDS GCA 90 bp | AGACCCCAGAGAGCTGGCTCATTCCTTCTACCCTTGAGGACACAGTaGAAAGACTGTCATCTAGGAGGAAGAGGGCCCTCACTAGACAAC | + |
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Preference number: 5 (lower is better) Translates to: RPQRAGSFLLPLRTQ*KDCHLGGRGPSLDN Trigger: GTTGTCTAGTGAGGGCCCTCTTCCTCCTAGATGACAGTCTTTGCACTGTGTCCTCAAGGGTAGAAGGAATGAGCCAGCTCTCTGGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 90 bp | CTGGATGGTCTATCATCCATTTGCCCAGCTCCCATGCTCAACAAGTaGGGAGGCGAGTGGAAAGGTCTTGGAGACATTCCACCTGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LDGLSSICPAPMLNK*GGEWKGLGDIPPVQ Trigger: TTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCAAATGGATGATAGACCATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 90 bp | GTAGAATACACAAATAAAGGTGGCCACAACTGCAGGCACTCAGGTTaGGTGAGAGGGGCCCAGTCCTTCACAGGTCACACTGGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VEYTNKGGHNCRHSG*VRGAQSFTGHTGLF Trigger: AAAGAGGCCAGTGTGACCTGTGAAGGACTGGGCCCCTCTCACTCAACCTGAGTGCCTGCAGTTGTGGCCACCTTTATTTGTGTATTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 90 bp | CCCAGCTCCCATGCTCAACAAGTGGGGAGGCGAGTGGAAAGGTCTTaGAGACATTCCACCTGTCCAACTATCTTGATCTTCTTTACAAGC | + |
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Preference number: 5 (lower is better) Translates to: PSSHAQQVGRRVERS*RHSTCPTILIFFTS Trigger: GCTTGTAAAGAAGATCAAGATAGTTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 90 bp | TCAGGGGGAAATGAAATTTTTAGAGGTTCTCAGGTACCTCTCGGATaGAAGGAGGCTCAGGGAGTTGCCTGTAACAAGACCGTCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: SGGNEIFRGSQVPLG*KEAQGVACNKTVLA Trigger: GGCCAAGACGGTCTTGTTACAGGCAACTCCCTGAGCCTCCTTCCATCCGAGAGGTACCTGAGAACCTCTAAAAATTTCATTTCCCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 90 bp | GCAGCTCCAGGGCCTCCCTGGAAAGCCATCTGCCTCATCCTCCAATaGCCACTTTTCTTCCATCAACCTGTCTTCCATAAAATGCCTTAT | + |
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Preference number: 5 (lower is better) Translates to: AAPGPPWKAICLILQ*PLFFHQPVFHKMPY Trigger: ATAAGGCATTTTATGGAAGACAGGTTGATGGAAGAAAAGTGGCCATTGGAGGATGAGGCAGATGGCTTTCCAGGGAGGCCCTGGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS GCA 90 bp | GTGAAAGAGAGGGTTTTTAATTCTCAGGCACTTCCTACCCACCCATaGTTAGACAGAGTGGATTCTGCCCACCAGAGAAGACCCTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VKERVFNSQALPTHP*LDRVDSAHQRRPSG Trigger: ACCTGAGGGTCTTCTCTGGTGGGCAGAATCCACTCTGTCTAAGCATGGGTGGGTAGGAAGTGCCTGAGAATTAAAAACCCTCTCTTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 90 bp | CCAAAATTTATCTGGATGGTCTATCATCCATTTGCCCAGCTCCCATaGTCAACAAGTGGGGAGGCGAGTGGAAAGGTCTTGGAGACATTC | + |
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Preference number: 5 (lower is better) Translates to: PKFIWMVYHPFAQLP*STSGEASGKVLETF Trigger: GAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCAAATGGATGATAGACCATCCAGATAAATTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 90 bp | GACTTCCATGGAAAGGTTGCAGATTATGCTCACTTCAACCTTTGCTaGCATCGATTGTGCATGGTTAACAGCAGAGCAGCCCTTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: DFHGKVADYAHFNLC*HRLCMVNSRAALGH Trigger: ATGGCCAAGGGCTGCTCTGCTGTTAACCATGCACAATCGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATGGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CCA 90 bp | CCTGCTCTGCTATTCTACTGCTACTGTTGCTGCTCCAAGCCAATGTaGTGCATGGGATTAGGGAGCTCTAGGAGTTTGCTTACTTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: PALLFYCYCCCSKPM*CMGLGSSRSLLTFK Trigger: CTTGAAAGTAAGCAAACTCCTAGAGCTCCCTAATCCCATGCACCACATTGGCTTGGAGCAGCAACAGTAGCAGTAGAATAGCAGAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 90 bp | TCCAGCTTCCAGGGAAGTGCTGGATTCATTGTAATGACACATGGATaGTCGGCTGTGTCCAGATGGAAAGTCTGCCTCAGTCTTAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSFQGSAGFIVMTHG*SAVSRWKVCLSLKA Trigger: TGCTTTAAGACTGAGGCAGACTTTCCATCTGGACACAGCCGACCATCCATGTGTCATTACAATGAATCCAGCACTTCCCTGGAAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS TCA 90 bp | AGGTCCTATCATGGCCAGTCCCTGGTTCTTTATCCATGTATATTCTaGATTTTCCCAATCCCGACCTGGAGGACCCTAGTTTATCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: RSYHGQSLVLYPCIF*IFPIPTWRTLVYQP Trigger: GGGCTGATAAACTAGGGTCCTCCAGGTCGGGATTGGGAAAATTCAGAATATACATGGATAAAGAACCAGGGACTGGCCATGATAGGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 90 bp | AATCCTAAATGGGGATGTGGGTCTGGGTCTTTCTCTGTGGATATCTaGATGGAAGGGCTTTGTAATCCTTGCCCTAAAACTGACAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: NPKWGCGSGSFSVDI*MEGLCNPCPKTDSP Trigger: TGGACTGTCAGTTTTAGGGCAAGGATTACAAAGCCCTTCCATGCAGATATCCACAGAGAAAGACCCAGACCCACATCCCCATTTAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454857.6 |
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| CDS CCA 90 bp | CTAAATGGGGATGTGGGTCTGGGTCTTTCTCTGTGGATATCTGCATaGAAGGGCTTTGTAATCCTTGCCCTAAAACTGACAGTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LNGDVGLGLSLWISA*KGFVILALKLTVQK Trigger: TTTCTGGACTGTCAGTTTTAGGGCAAGGATTACAAAGCCCTTCCATGCAGATATCCACAGAGAAAGACCCAGACCCACATCCCCATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454857.6 |
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| CDS CCA 90 bp | CATTTGGAAGGAAGCGGAAGAAATGAGTCCCTAAGCAATCCTAAATaGGGATGTGGGTCTGGGTCTTTCTCTGTGGATATCTGCATGGAA | + |
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Preference number: 5 (lower is better) Translates to: HLEGSGRNESLSNPK*GCGSGSFSVDICME Trigger: TTCCATGCAGATATCCACAGAGAAAGACCCAGACCCACATCCCCATTTAGGATTGCTTAGGGACTCATTTCTTCCGCTTCCTTCCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454857.6 |
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| CDS GCA 90 bp | GGGCAGAACCACTGTGAGAAAGGTTTAAGACTTCCATGGAAAGGTTaGAGATTATGCTCACTTCAACCTTTGCTGCCATCGATTGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: GQNHCEKGLRLPWKG*RLCSLQPLLPSIVH Trigger: ATGCACAATCGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATGGAAGTCTTAAACCTTTCTCACAGTGGTTCTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS GCA 90 bp | ACTCTGTTGAAGCCTGGGAGGAAGGGTTTGCCTTTCCTCCTTCACTaGTCTTTGCATTTCCCTCCAAAATCTGAACATGCTATGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: TLLKPGRKGLPFLLH*SLHFPPKSEHAMKM Trigger: CATTTTCATAGCATGTTCAGATTTTGGAGGGAAATGCAAAGAGCAGTGAAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CCA 90 bp | CCAGGGCTCACATTCTCCGGATTTCTAAGTTGGAGATTAAATGAATaGGACTGCGTTTATCAAGTCCAAAGGGGAGAGGAAAAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PGLTFSGFLSWRLNE*DCVYQVQRGEEKKD Trigger: GTCCTTCTTTTCCTCTCCCCTTTGGACTTGATAAACGCAGTCCCATTCATTTAATCTCCAACTTAGAAATCCGGAGAATGTGAGCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 90 bp | TCTGACAATGGGCAGAACCACTGTGAGAAAGGTTTAAGACTTCCATaGAAAGGTTGCAGATTATGCTCACTTCAACCTTTGCTGCCATCG | + |
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Preference number: 5 (lower is better) Translates to: SDNGQNHCEKGLRLP*KGCRLCSLQPLLPS Trigger: CGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATGGAAGTCTTAAACCTTTCTCACAGTGGTTCTGCCCATTGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS TCA 90 bp | TTATCACCTCTTTTCTCAGCGGATGACCAGCCTTTGTCCCAGAGCTaGGTTTTCTGCTCCAAATATCTGGTATTTCACTGCCATTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LSPLFSADDQPLSQS*VFCSKYLVFHCHFC Trigger: ACAGAAATGGCAGTGAAATACCAGATATTTGGAGCAGAAAACTCAGCTCTGGGACAAAGGCTGGTCATCCGCTGAGAAAAGAGGTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 90 bp | ACGGAGAATTCTTTCTCTTCTCTTTCCATGCTTCCCCCAAGATTGTaGTCTGTCAGCCTAGTAGGTTTAATAGGTGAACTACAAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: TENSFSSLSMLPPRL*SVSLVGLIGELQDR Trigger: CCTGTCTTGTAGTTCACCTATTAAACCTACTAGGCTGACAGAGCACAATCTTGGGGGAAGCATGGAAAGAGAAGAGAAAGAATTCTCCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 90 bp | CAAGAGTTGTCCAAAGGATATGAAGGATCTGTTTCTCAAGTGTCCTaGTGTGAACAATGCCTAAAGAGAGTTCTCCCACAACCTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: QELSKGYEGSVSQVS*CEQCLKRVLPQPHL Trigger: GAGATGAGGTTGTGGGAGAACTCTCTTTAGGCATTGTTCACATCAGGACACTTGAGAAACAGATCCTTCATATCCTTTGGACAACTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 90 bp | TATGTCATGCGGCACAAAATAGATCAATTATCTTTTGCTTGTCTCTaGGCTTTCACTGAAGCGGTGTTAGGACCTGGCATCATGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: YVMRHKIDQLSFACL*AFTEAVLGPGIMSR Trigger: CCTTGACATGATGCCAGGTCCTAACACCGCTTCAGTGAAAGCTCAGAGACAAGCAAAAGATAATTGATCTATTTTGTGCCGCATGACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 90 bp | AATCCCAGGGCTCACATTCTCCGGATTTCTAAGTTGGAGATTAAATaGATGGGACTGCGTTTATCAAGTCCAAAGGGGAGAGGAAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: NPRAHILRISKLEIK*MGLRLSSPKGRGKE Trigger: TTCTTTTCCTCTCCCCTTTGGACTTGATAAACGCAGTCCCATTCATTTAATCTCCAACTTAGAAATCCGGAGAATGTGAGCCCTGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 90 bp | TTGTACAGAAGAGCCGGGCACCATCATCTGCAATGCCTTTGGAAATaGGTTGTGGATGTTTTGTCATACTGGTTTGAGATCTTGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: LYRRAGHHHLQCLWK*VVDVLSYWFEILLV Trigger: TACCAACAAGATCTCAAACCAGTATGACAAAACATCCACAACTCATTTCCAAAGGCATTGCAGATGATGGTGCCCGGCTCTTCTGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 90 bp | AAGAGGGCCCTCACTAGACAACCATTCTGCTGGTACTTTGGTCTTTaGCTTCCCATCTCCAGACTTGTGAGAAATACATTTCTTAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: KRALTRQPFCWYFGL*LPISRLVRNTFLRN Trigger: ATTTCTAAGAAATGTATTTCTCACAAGTCTGGAGATGGGAAGTCAAAGACCAAAGTACCAGCAGAATGGTTGTCTAGTGAGGGCCCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 90 bp | GCACAAAATAGATCAATTATCTTTTGCTTGTCTCTGAGCTTTCACTaGAGCGGTGTTAGGACCTGGCATCATGTCAAGGATGCTCTGATA | + |
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Preference number: 5 (lower is better) Translates to: AQNRSIIFCLSLSFH*SGVRTWHHVKDALI Trigger: TATCAGAGCATCCTTGACATGATGCCAGGTCCTAACACCGCTTCAGTGAAAGCTCAGAGACAAGCAAAAGATAATTGATCTATTTTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 90 bp | GCTTCCCCCAAGATTGTGCTCTGTCAGCCTAGTAGGTTTAATAGGTaGACTACAAGACAGGAACAAGACAGCATTAGATATGGTTATATC | + |
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Preference number: 5 (lower is better) Translates to: ASPKIVLCQPSRFNR*TTRQEQDSIRYGYI Trigger: GATATAACCATATCTAATGCTGTCTTGTTCCTGTCTTGTAGTTCACCTATTAAACCTACTAGGCTGACAGAGCACAATCTTGGGGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 90 bp | AGATCCGAAATGCTTCATGCGTTTGATGTCTATAGAATTGTGATGTaGGGATGGCTCCTCACATCTCCAGTGAATAAGTTGCTTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RSEMLHAFDVYRIVM*GWLLTSPVNKLLFR Trigger: TCTGAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACATCACAATTCTATAGACATCAAACGCATGAAGCATTTCGGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 90 bp | GAAATGCTTCATGCGTTTGATGTCTATAGAATTGTGATGTGCGGATaGCTCCTCACATCTCCAGTGAATAAGTTGCTTTTCAGAGACCTA | + |
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Preference number: 5 (lower is better) Translates to: EMLHAFDVYRIVMCG*LLTSPVNKLLFRDL Trigger: TAGGTCTCTGAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACATCACAATTCTATAGACATCAAACGCATGAAGCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454857.6 |
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| CDS CCA 90 bp | TTGGAGGAAGCAGGACAAGATATACGAGACATTTCCACTATTGCCTaGAGGCAATTTGCATCTCTTAAAGATGAAGAGGCAGAGGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LEEAGQDIRDISTIA*RQFASLKDEEAEVK Trigger: TTTAACCTCTGCCTCTTCATCTTTAAGAGATGCAAATTGCCTCCAGGCAATAGTGGAAATGTCTCGTATATCTTGTCCTGCTTCCTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 90 bp | ATGAGCTCATCCTTTTCTTGTCTGGTATTCTACTCCAACCTTTATTaGACTGGTGTTCTAGGTAACCCACTCACTAAAATTTGCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: MSSSFSCLVFYSNLY*TGVLGNPLTKICRS Trigger: GCTCCTGCAAATTTTAGTGAGTGGGTTACCTAGAACACCAGTCCAATAAAGGTTGGAGTAGAATACCAGACAAGAAAAGGATGAGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614455.4 |
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| CDS CCA 90 bp | GAAATGCTTCATGCGTTTGATGTCTATAGAATTGTGATGTGCGGATaGCTCCTCACATCTCCAGTGAATAAGTTGCTTTTCAGAGACCTT | + |
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Preference number: 5 (lower is better) Translates to: EMLHAFDVYRIVMCG*LLTSPVNKLLFRDL Trigger: AAGGTCTCTGAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACATCACAATTCTATAGACATCAAACGCATGAAGCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665675.1 |
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| CDS GCA 90 bp | CTCACATTCTCCGGATTTCTAAGTTGGAGATTAAATGAATGGGACTaGGTTTATCAAGTCCAAAGGGGAGAGGAAAAGAAGGACTATGAT | + |
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Preference number: 5 (lower is better) Translates to: LTFSGFLSWRLNEWD*VYQVQRGEEKKDYD Trigger: ATCATAGTCCTTCTTTTCCTCTCCCCTTTGGACTTGATAAACGCAGTCCCATTCATTTAATCTCCAACTTAGAAATCCGGAGAATGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 90 bp | GAAATGCTTCATGCGTTTGATGTCTATAGAATTGTGATGTGCGGATaGCTCCTCACATCTCCAGTGAATAAGTTGCTTTTCAGAGACATA | + |
|
Preference number: 5 (lower is better) Translates to: EMLHAFDVYRIVMCG*LLTSPVNKLLFRDI Trigger: TATGTCTCTGAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACATCACAATTCTATAGACATCAAACGCATGAAGCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435944.5 ENST00000439517.2 |
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| CDS CCA 90 bp | TGCTCCACATTCCTCTTTGTGCCCACAGAAATGCTTGATTTGGTTTaGTATGAGTCAAACAAACTATTCTCATCACAAGTGGAGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSTFLFVPTEMLDLV*YESNKLFSSQVEQR Trigger: TCTTTGCTCCACTTGTGATGAGAATAGTTTGTTTGACTCATACCAAACCAAATCAAGCATTTCTGTGGGCACAAAGAGGAATGTGGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 90 bp | AGTGCTGATTCAGTAGAGAGTCTCCAAACCATATTCATGAAGGACTaGATCTGTGTCTGCTTAGCTAATTCAGTAAATGCCGTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SADSVESLQTIFMKD*ICVCLANSVNAVEK Trigger: TTTTTCTACGGCATTTACTGAATTAGCTAAGCAGACACAGATCCAGTCCTTCATGAATATGGTTTGGAGACTCTCTACTGAATCAGCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 90 bp | TTAATTTTACAAGCTGCTACACCACAAAATCAATGTCTACTGCAGTaGGAATCAACCAAGATCCTGTATCTCTTCCCTGTATGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LILQAATPQNQCLLQ*ESTKILYLFPVCCW Trigger: CCAACAACATACAGGGAAGAGATACAGGATCTTGGTTGATTCTCACTGCAGTAGACATTGATTTTGTGGTGTAGCAGCTTGTAAAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 90 bp | TCTAATTGCTCTTCCTGTGTTAGTTCATTAAGCCTGACTATTGAGTaGATATTCAGGCATCTGTCTCCAACATCTGTCATCTCATTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SNCSSCVSSLSLTIE*IFRHLSPTSVISLI Trigger: AATCAATGAGATGACAGATGTTGGAGACAGATGCCTGAATATCCACTCAATAGTCAGGCTTAATGAACTAACACAGGAAGAGCAATTAGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS TCA 90 bp | ACATTAGCTCCAGTACTGGGCTTCTCACATCTGTTAGTAAAGATTTaGTTAGGGCTACACAAATGTGCTAGATTAAACTATCTAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLAPVLGFSHLLVKI*LGLHKCARLNYLVG Trigger: ACCAACTAGATAGTTTAATCTAGCACATTTGTGTAGCCCTAATCAAATCTTTACTAACAGATGTGAGAAGCCCAGTACTGGAGCTAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS TCA 90 bp | ATCATAGTATTTAAAGGTGGATGTTTAGTAAGAAGGAAGTTAAGATaGGCCAAAGATAGGAATGGCATGATTAGCTATTCCCTGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: IIVFKGGCLVRRKLR*AKDRNGMISYSLYC Trigger: GCAGTACAGGGAATAGCTAATCATGCCATTCCTATCTTTGGCTCATCTTAACTTCCTTCTTACTAAACATCCACCTTTAAATACTATGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 90 bp | ACAACAGAGAATAGGGGTAGGAGCTGTATTATTTGTATATTGCCATaGATACTTTACTTACAATGCAATAGAACAACACATCCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: TTENRGRSCIICILP*ILYLQCNRTTHPYT Trigger: AGTGTATGGATGTGTTGTTCTATTGCATTGTAAGTAAAGTATCCATGGCAATATACAAATAATACAGCTCCTACCCCTATTCTCTGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 90 bp | TTTCCTAAGCCAACAGGCTTACCCTTTCTACTGGGTTACCGTAGATaGCTTTGTAAAAATAACTTTAATGCTATAATCCAACAAAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: FPKPTGLPFLLGYRR*LCKNNFNAIIQQNQ Trigger: TTGATTTTGTTGGATTATAGCATTAAAGTTATTTTTACAAAGCCATCTACGGTAACCCAGTAGAAAGGGTAAGCCTGTTGGCTTAGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 90 bp | TACCTCTTATTTATAGGGCACTTTACAGTTTATAAAGGAATCTCATaGAACCTTATTAAAAGGGCATGGAGGTTAGAATCAAAGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: YLLFIGHFTVYKGIS*NLIKRAWRLESKAL Trigger: CAATGCCTTTGATTCTAACCTCCATGCCCTTTTAATAAGGTTCCATGAGATTCCTTTATAAACTGTAAAGTGCCCTATAAATAAGAGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | CAGGCCCAAGCAGCATCAAGCCCCGGGTCCCCGCCATaGCGCCCGCGTCGCGCGCCTCCAGTCGCCACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAQAASSPGSPP*RPRRAPPVATA Trigger: TGCCGTGGCGACTGGAGGCGCGCGACGCGGGCGCAATGGCGGGGACCCGGGGCTTGATGCTGCTTGGGCCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000454781.6 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 90 bp | CCACTGGGCCAGGCCCAAGCAGCATCAAGCCCCGGGTCCCCGCCATaGCGCCCGCGTCGCGCGCCTCCAGTCGCCACGGCAACCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLGQAQAASSPGSPP*RPRRAPPVATATRE Trigger: CTCCCTGGTTGCCGTGGCGACTGGAGGCGCGCGACGCGGGCGCAATGGCGGGGACCCGGGGCTTGATGCTGCTTGGGCCTGGCCCAGTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435944.5 ENST00000665675.1 |
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| CDS GCA 72 bp | AGGCCCAAGCAGCATCAAGCCCCGGGTCCCCGCCATTaGGCCCGCGTCGCGCGCCTCCAGTCGCCACGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RPKQHQAPGPRH*ARVARLQSPRQ Trigger: TTGCCGTGGCGACTGGAGGCGCGCGACGCGGGCGCAATGGCGGGGACCCGGGGCTTGATGCTGCTTGGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000454781.6 ENST00000454857.6 ENST00000665675.1 |
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| CDS TCA 72 bp | GGGGGTCCGCGCAGAGGCCTGCACGGCGCGGCCAGGTaGTGGTGGGCCTCTGTGTTTCTCCAGACGAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGPRRGLHGAAR*WWASVFLQTKG Trigger: CCCTTTCGTCTGGAGAAACACAGAGGCCCACCATCACCTGGCCGCGCCGTGCAGGCCTCTGCGCGGACCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414722.5 |
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| CDS GCA 72 bp | TTCCCGAGACCAACATGGAGAAGGCCAACCCGGAAGTaGCGCCGCAGCCGCCCGCCCGGTGTTAGGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FPRPTWRRPTRK*RRSRPPGVRSR Trigger: GCGGCTCCTAACACCGGGCGGGCGGCTGCGGCGGCACTTCCGGGTTGGCCTTCTCCATGTTGGTCTCGGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435944.5 |
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| CDS CCA 72 bp | TCGAGGCCCCGCCCCTTCACGTTCCCGAGACCAACATaGAGAAGGCCAACCCGGAAGTGCCGCCGCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRPRPFTFPRPT*RRPTRKCRRSR Trigger: GCGGCTGCGGCGGCACTTCCGGGTTGGCCTTCTCCATGTTGGTCTCGGGAACGTGAAGGGGCGGGGCCTCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435944.5 |
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| CDS TCA 72 bp | GCCAGGGTTGGTGACAAAGAGCATGAAGGCCAGCGGTaGGATAGAAGGGATATGTGCAGGCTCCCCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARVGDKEHEGQR*DRRDMCRLPQH Trigger: GTGCTGGGGGAGCCTGCACATATCCCTTCTATCTCACCGCTGGCCTTCATGCTCTTTGTCACCAACCCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 72 bp | TTACCATGCGGACCAGCAGTGCTTGTGCTTTGTACCTaGTTCCTAAGGCTGCTGTCCAGGGGGTGCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPCGPAVLVLCT*FLRLLSRGCPE Trigger: CTCAGGGCACCCCCTGGACAGCAGCCTTAGGAACCAGGTACAAAGCACAAGCACTGCTGGTCCGCATGGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 72 bp | GTTCTCACTTCCCAGAGGTTGTTGCCAGGTACAGCATaGCCACGGGCCCCGGAGAACCATCCAGAACTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VLTSQRLLPGTA*PRAPENHPELT Trigger: AGTGAGTTCTGGATGGTTCTCCGGGGCCCGTGGCCATGCTGTACCTGGCAACAACCTCTGGGAAGTGAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 72 bp | GATAGAAGGGATATGTGCAGGCTCCCCCAGCACACCTaGGGTCAGATAGAGCACCTGGGAGGCCATCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: DRRDMCRLPQHT*GQIEHLGGHHF Trigger: AAAGTGATGGCCTCCCAGGTGCTCTATCTGACCCCAGGTGTGCTGGGGGAGCCTGCACATATCCCTTCTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | ATGGTGATACCTGTTGTTCTCACTTCCCAGAGGTTGTaGCCAGGTACAGCATGGCCACGGGCCCCGGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: MVIPVVLTSQRL*PGTAWPRAPEN Trigger: GTTCTCCGGGGCCCGTGGCCATGCTGTACCTGGCAACAACCTCTGGGAAGTGAGAACAACAGGTATCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | ATCATGGTGATACCTGTTGTTCTCACTTCCCAGAGGTaGTTGCCAGGTACAGCATGGCCACGGGCCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: IMVIPVVLTSQR*LPGTAWPRAPE Trigger: CTCCGGGGCCCGTGGCCATGCTGTACCTGGCAACAACCTCTGGGAAGTGAGAACAACAGGTATCACCATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 72 bp | TGGAGAGCATGTGCTCAGCATTACGGCCCTGACGGGTaGGGGAGCTGGGGTATTTATGCACCAACTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: WRACAQHYGPDG*GSWGIYAPTHI Trigger: GATGTGAGTTGGTGCATAAATACCCCAGCTCCCTCACCCGTCAGGGCCGTAATGCTGAGCACATGCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 72 bp | TCTTCCTCTGGCAGTGAATCCTGCTGTGGCCAAGTCTaGGACTGGTTGGATTTCCCTCTGTGCCACTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSGSESCCGQV*DWLDFPLCHSH Trigger: GTGGGAGTGGCACAGAGGGAAATCCAACCAGTCTCAGACTTGGCCACAGCAGGATTCACTGCCAGAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657543.1 |
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| CDS CCA 72 bp | TGCCCAGCTCCCATGCTCAACAAGTGGGGAGGCGAGTaGAAAGGTCTTGGAGACATTCCACCTGTCCAACTA | + |
|
Preference number: 6 (lower is better) Translates to: CPAPMLNKWGGE*KGLGDIPPVQL Trigger: TAGTTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 72 bp | CACCAGAGAAGACCCTCAGGTAGAGAGGTGCCAGGGTaGGTGACAAAGAGCATGAAGGCCAGCGGTGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: HQRRPSGREVPG*VTKSMKASGEI Trigger: TATCTCACCGCTGGCCTTCATGCTCTTTGTCACCAACCCTGGCACCTCTCTACCTGAGGGTCTTCTCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 72 bp | ATACCTTGGGGAAGTTTCTTGTTGTCCTTATGTTTCTaGATCTCCATCGGGGTCGGGAGGAGGAGCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IPWGSFLLSLCF*ISIGVGRRSRA Trigger: GGCCCGGCTCCTCCTCCCGACCCCGATGGAGATTCAGAAACATAAGGACAACAAGAAACTTCCCCAAGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414722.5 |
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| CDS TCA 72 bp | CTTCATGTTCACACGGAAACACCGTCCAATGTGCTCTaGTCAGCAGCTGCAACATGGCCTTCCCCATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHVHTETPSNVL*SAAATWPSPWW Trigger: CCACCATGGGGAAGGCCATGTTGCAGCTGCTGATCAGAGCACATTGGACGGTGTTTCCGTGTGAACATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS TCA 72 bp | ACAAATAAAGGTGGCCACAACTGCAGGCACTCAGGTTaGGTGAGAGGGGCCCAGTCCTTCACAGGTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: TNKGGHNCRHSG*VRGAQSFTGHT Trigger: AGTGTGACCTGTGAAGGACTGGGCCCCTCTCACTCAACCTGAGTGCCTGCAGTTGTGGCCACCTTTATTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS GCA 72 bp | AGTCCCCCTGCTCTGCTATTCTACTGCTACTGTTGCTaGTCCAAGCCAATGTGGTGCATGGGATTAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPPALLFYCYCC*SKPMWCMGLGS Trigger: GCTCCCTAATCCCATGCACCACATTGGCTTGGAGCAGCAACAGTAGCAGTAGAATAGCAGAGCAGGGGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 72 bp | GTCTTGGCCTTGAGTCCCCCTGCTCTGCTATTCTACTaGTACTGTTGCTGCTCCAAGCCAATGTGGTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: VLALSPPALLFY*YCCCSKPMWCM Trigger: CATGCACCACATTGGCTTGGAGCAGCAACAGTAGCAGTAGAATAGCAGAGCAGGGGGACTCAAGGCCAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 72 bp | AAACCGACACCTTCGGCCTCGTGTGGGATGGCAGCTTaGCCAAGGTTAAACAGCAAGTTAAGCAGGAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KPTPSASCGMAA*PRLNSKLSRKW Trigger: CCACTTCCTGCTTAACTTGCTGTTTAACCTTGGGCAAGCTGCCATCCCACACGAGGCCGAAGGTGTCGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS GCA 72 bp | CATGGGAAGGCCCAGTCTGGAAGTGATTCCTTACCATaGGGACCAGCAGTGCTTGTGCTTTGTACCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HGKAQSGSDSLP*GPAVLVLCTWF Trigger: GAACCAGGTACAAAGCACAAGCACTGCTGGTCCGCATGGTAAGGAATCACTTCCAGACTGGGCCTTCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | CCCGGGTTGACTCTGTTGAAGCCTGGGAGGAAGGGTTaGCCTTTCCTCCTTCACTGCTCTTTGCATTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLTLLKPGRKG*PFLLHCSLHFP Trigger: AGGGAAATGCAAAGAGCAGTGAAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS TCA 72 bp | GATCATGCCGTACACCTTTCCATCTTCCTCTGGCAGTaGATCCTGCTGTGGCCAAGTCTGAGACTGGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DHAVHLSIFLWQ*ILLWPSLRLVG Trigger: TCCAACCAGTCTCAGACTTGGCCACAGCAGGATTCACTGCCAGAGGAAGATGGAAAGGTGTACGGCATGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657543.1 |
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| CDS GCA 72 bp | AGAGCTGGCTCATTCCTTCTACCCTTGAGGACACAGTaGAAAGACTGTCATCTAGGAGGAAGAGGGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RAGSFLLPLRTQ*KDCHLGGRGPS Trigger: TGAGGGCCCTCTTCCTCCTAGATGACAGTCTTTGCACTGTGTCCTCAAGGGTAGAAGGAATGAGCCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 72 bp | ATCTGGATGGTCTATCATCCATTTGCCCAGCTCCCATaGTCAACAAGTGGGGAGGCGAGTGGAAAGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IWMVYHPFAQLP*STSGEASGKVL Trigger: CAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCAAATGGATGATAGACCATCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 72 bp | TTGAGTCCCCCTGCTCTGCTATTCTACTGCTACTGTTaGTGCTCCAAGCCAATGTGGTGCATGGGATTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPPALLFYCYC*CSKPMWCMGLG Trigger: CCCTAATCCCATGCACCACATTGGCTTGGAGCAGCAACAGTAGCAGTAGAATAGCAGAGCAGGGGGACTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 72 bp | CTATCATCCATTTGCCCAGCTCCCATGCTCAACAAGTaGGGAGGCGAGTGGAAAGGTCTTGGAGACATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSICPAPMLNK*GGEWKGLGDIP Trigger: TGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCAAATGGATGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 72 bp | CATCTCATTGATTCCCGGGTTGACTCTGTTGAAGCCTaGGAGGAAGGGTTTGCCTTTCCTCCTTCACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLIDSRVDSVEA*EEGFAFPPSLL Trigger: GAGCAGTGAAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CAA 72 bp | CTTGAGTCCCCCTGCTCTGCTATTCTACTGCTACTGTaGCTGCTCCAAGCCAATGTGGTGCATGGGATTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LESPCSAILLLL*LLQANVVHGIR Trigger: CCTAATCCCATGCACCACATTGGCTTGGAGCAGCAACAGTAGCAGTAGAATAGCAGAGCAGGGGGACTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 72 bp | AAAACCGACACCTTCGGCCTCGTGTGGGATGGCAGCTaGCCCAAGGTTAAACAGCAAGTTAAGCAGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KTDTFGLVWDGS*PKVKQQVKQEV Trigger: CACTTCCTGCTTAACTTGCTGTTTAACCTTGGGCAAGCTGCCATCCCACACGAGGCCGAAGGTGTCGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 90 bp | GCCCAGCTCCCATGCTCAACAAGTGGGGAGGCGAGTGGAAAGGTCTaGGAGACATTCCACCTGTCCAACTATCTTGATCTTCTTTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: AQLPCSTSGEASGKV*ETFHLSNYLDLLYK Trigger: CTTGTAAAGAAGATCAAGATAGTTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 90 bp | CTGTCTCCAACATCTGTCATCTCATTGATTCCCGGGTTGACTCTGTaGAAGCCTGGGAGGAAGGGTTTGCCTTTCCTCCTTCACTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSPTSVISLIPGLTL*KPGRKGLPFLLHCS Trigger: AGAGCAGTGAAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGAGATGACAGATGTTGGAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CAA 72 bp | AAGAGACCCCAGAGAGCTGGCTCATTCCTTCTACCCTaGAGGACACAGTGCAAAGACTGTCATCTAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KRPQRAGSFLLP*RTQCKDCHLGG Trigger: TCCTCCTAGATGACAGTCTTTGCACTGTGTCCTCAAGGGTAGAAGGAATGAGCCAGCTCTCTGGGGTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 90 bp | GGACCCAAGACCATCTCATCACGTCATAGAAGGCTCCTCAAACCCTaGGGCTCTGGCCATGACCTCACTTTGCTTACAATGTATGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPKTISSRHRRLLKP*GSGHDLTLLTMYVA Trigger: TGCTACATACATTGTAAGCAAAGTGAGGTCATGGCCAGAGCCCAAGGGTTTGAGGAGCCTTCTATGACGTGATGAGATGGTCTTGGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 90 bp | TTCAGGCATCTGTCTCCAACATCTGTCATCTCATTGATTCCCGGGTaGACTCTGTTGAAGCCTGGGAGGAAGGGTTTGCCTTTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FRHLSPTSVISLIPG*TLLKPGRKGLPFLL Trigger: AAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGAGATGACAGATGTTGGAGACAGATGCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS GCA 72 bp | GATGCCAAAATTTATCTGGATGGTCTATCATCCATTTaGCCAGCTCCCATGCTCAACAAGTGGGGAGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DAKIYLDGLSSI*PAPMLNKWGGE Trigger: CTCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCAAATGGATGATAGACCATCCAGATAAATTTTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 72 bp | ATTGTCTTCATGTTCACACGGAAACACCGTCCAATGTaGTCTGATCAGCAGCTGCAACATGGCCTTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: IVFMFTRKHRPM*SDQQLQHGLPH Trigger: ATGGGGAAGGCCATGTTGCAGCTGCTGATCAGAGCACATTGGACGGTGTTTCCGTGTGAACATGAAGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS GCA 72 bp | GATTATGCTCACTTCAACCTTTGCTGCCATCGATTGTaGATGGTTAACAGCAGAGCAGCCCTTGGCCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: DYAHFNLCCHRL*MVNSRAALGHV Trigger: CACATGGCCAAGGGCTGCTCTGCTGTTAACCATGCACAATCGATGGCAGCAAAGGTTGAAGTGAGCATAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
||
| CDS CCA 72 bp | CATGCTCAACAAGTGGGGAGGCGAGTGGAAAGGTCTTaGAGACATTCCACCTGTCCAACTATCTTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HAQQVGRRVERS*RHSTCPTILIF Trigger: GAAGATCAAGATAGTTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS CCA 72 bp | CCATCTCATCACGTCATAGAAGGCTCCTCAAACCCTTaGGCTCTGGCCATGACCTCACTTTGCTTACAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PSHHVIEGSSNP*ALAMTSLCLQC Trigger: ACATTGTAAGCAAAGTGAGGTCATGGCCAGAGCCCAAGGGTTTGAGGAGCCTTCTATGACGTGATGAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS CCA 72 bp | CAGGGAAGTGCTGGATTCATTGTAATGACACATGGATaGTCGGCTGTGTCCAGATGGAAAGTCTGCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QGSAGFIVMTHG*SAVSRWKVCLS Trigger: ACTGAGGCAGACTTTCCATCTGGACACAGCCGACCATCCATGTGTCATTACAATGAATCCAGCACTTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
||
| CDS CCA 72 bp | CTTCCAGGGAAGTGCTGGATTCATTGTAATGACACATaGATGGTCGGCTGTGTCCAGATGGAAAGTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPGKCWIHCNDT*MVGCVQMESLP Trigger: AGGCAGACTTTCCATCTGGACACAGCCGACCATCCATGTGTCATTACAATGAATCCAGCACTTCCCTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
||
| CDS CAA 72 bp | CCATGCTCAACAAGTGGGGAGGCGAGTGGAAAGGTCTaGGAGACATTCCACCTGTCCAACTATCTTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: PCSTSGEASGKV*ETFHLSNYLDL Trigger: AAGATCAAGATAGTTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCTCCCCACTTGTTGAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS CAA 72 bp | ACCATCTCATCACGTCATAGAAGGCTCCTCAAACCCTaGGGCTCTGGCCATGACCTCACTTTGCTTACAATG | + |
|
Preference number: 6 (lower is better) Translates to: TISSRHRRLLKP*GSGHDLTLLTM Trigger: CATTGTAAGCAAAGTGAGGTCATGGCCAGAGCCCAAGGGTTTGAGGAGCCTTCTATGACGTGATGAGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS CAA 72 bp | GAGATTGGAACACTAGGGAAGAATCTCATGGTTTCATaGATGGTGGAGTCAGCAGGCCAAGGGAGCTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: EIGTLGKNLMVS*MVESAGQGSFV Trigger: CACGAAGCTCCCTTGGCCTGCTGACTCCACCATCAATGAAACCATGAGATTCTTCCCTAGTGTTCCAATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS CAA 72 bp | ACATCTGTCATCTCATTGATTCCCGGGTTGACTCTGTaGAAGCCTGGGAGGAAGGGTTTGCCTTTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSVISLIPGLTL*KPGRKGLPFLL Trigger: AAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGAGATGACAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
||
| CDS CAA 90 bp | TGTATTTTAAAAACCGACACCTTCGGCCTCGTGTGGGATGGCAGCTaGCCCAAGGTTAAACAGCAAGTTAAGCAGGAAGTGGCAGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CILKTDTFGLVWDGS*PKVKQQVKQEVAEL Trigger: CAACTCTGCCACTTCCTGCTTAACTTGCTGTTTAACCTTGGGCAAGCTGCCATCCCACACGAGGCCGAAGGTGTCGGTTTTTAAAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
||
| CDS CAA 90 bp | TCATTGATTCCCGGGTTGACTCTGTTGAAGCCTGGGAGGAAGGGTTaGCCTTTCCTCCTTCACTGCTCTTTGCATTTCCCTCCAAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SLIPGLTLLKPGRKG*PFLLHCSLHFPPKS Trigger: AGATTTTGGAGGGAAATGCAAAGAGCAGTGAAGGAGGAAAGGCAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622752.1 |
||
| CDS GCA 72 bp | AGGGTTTTTAATTCTCAGGCACTTCCTACCCACCCATaGTTAGACAGAGTGGATTCTGCCCACCAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVFNSQALPTHP*LDRVDSAHQRR Trigger: TCTTCTCTGGTGGGCAGAATCCACTCTGTCTAAGCATGGGTGGGTAGGAAGTGCCTGAGAATTAAAAACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS GCA 72 bp | GGAAAGGTTGCAGATTATGCTCACTTCAACCTTTGCTaGCATCGATTGTGCATGGTTAACAGCAGAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKVADYAHFNLC*HRLCMVNSRAA Trigger: GGCTGCTCTGCTGTTAACCATGCACAATCGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
||
| CDS CCA 72 bp | ATCCTAAATGGGGATGTGGGTCTGGGTCTTTCTCTGTaGATATCTGCATGGAAGGGCTTTGTAATCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILNGDVGLGLSL*ISAWKGFVILA Trigger: GGCAAGGATTACAAAGCCCTTCCATGCAGATATCCACAGAGAAAGACCCAGACCCACATCCCCATTTAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454857.6 |
||
| CDS CCA 72 bp | GGAAGCGGAAGAAATGAGTCCCTAAGCAATCCTAAATaGGGATGTGGGTCTGGGTCTTTCTCTGTGGATATC | + |
|
Preference number: 6 (lower is better) Translates to: GSGRNESLSNPK*GCGSGSFSVDI Trigger: GATATCCACAGAGAAAGACCCAGACCCACATCCCCATTTAGGATTGCTTAGGGACTCATTTCTTCCGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454857.6 |
||
| CDS CAA 72 bp | AGATGCCAAAATTTATCTGGATGGTCTATCATCCATTaGCCCAGCTCCCATGCTCAACAAGTGGGGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RCQNLSGWSIIH*PSSHAQQVGRR Trigger: TCGCCTCCCCACTTGTTGAGCATGGGAGCTGGGCAAATGGATGATAGACCATCCAGATAAATTTTGGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS CAA 72 bp | ATATTCAGGCATCTGTCTCCAACATCTGTCATCTCATaGATTCCCGGGTTGACTCTGTTGAAGCCTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IFRHLSPTSVIS*IPGLTLLKPGR Trigger: CCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGAGATGACAGATGTTGGAGACAGATGCCTGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
||
| CDS CAA 72 bp | GGACATCTGCACAAGAGGCCATCTATACCCTGGCGTTaGGTTTTACTTCTGTTTCTAAAGGGACTTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GHLHKRPSIPWR*VLLLFLKGLGP Trigger: TGGGCCAAGTCCCTTTAGAAACAGAAGTAAAACCAAACGCCAGGGTATAGATGGCCTCTTGTGCAGATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657543.1 |
||
| CDS CAA 90 bp | ATTGAGTGGATATTCAGGCATCTGTCTCCAACATCTGTCATCTCATaGATTCCCGGGTTGACTCTGTTGAAGCCTGGGAGGAAGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IEWIFRHLSPTSVIS*IPGLTLLKPGRKGL Trigger: CAAACCCTTCCTCCCAGGCTTCAACAGAGTCAACCCGGGAATCAATGAGATGACAGATGTTGGAGACAGATGCCTGAATATCCACTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
||
| CDS CAA 90 bp | TGCTCCAAGCCAATGTGGTGCATGGGATTAGGGAGCTCTAGGAGTTaGCTTACTTTCAAGGTCCTTCTTGAGAAACAAGATGCAAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CSKPMWCMGLGSSRS*LTFKVLLEKQDASD Trigger: GTCACTTGCATCTTGTTTCTCAAGAAGGACCTTGAAAGTAAGCAAACTCCTAGAGCTCCCTAATCCCATGCACCACATTGGCTTGGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS GCA 72 bp | ACAGTTTCGATGGGTGTAGTATTCATGGGTCTTTCTTaGGGTTGGATCATGCCGTACACCTTTCCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVSMGVVFMGLS*GWIMPYTFPSS Trigger: GGAAGATGGAAAGGTGTACGGCATGATCCAACCGCAAGAAAGACCCATGAATACTACACCCATCGAAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657543.1 |
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| CDS CCA 72 bp | GATGTGGGTCTGGGTCTTTCTCTGTGGATATCTGCATaGAAGGGCTTTGTAATCCTTGCCCTAAAACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: DVGLGLSLWISA*KGFVILALKLT Trigger: TGTCAGTTTTAGGGCAAGGATTACAAAGCCCTTCCATGCAGATATCCACAGAGAAAGACCCAGACCCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454857.6 |
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| CDS CAA 90 bp | AGGCGAGTGGAAAGGTCTTGGAGACATTCCACCTGTCCAACTATCTaGATCTTCTTTACAAGCTCCCTATTCTTCACTTCGTCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RRVERSWRHSTCPTI*IFFTSSLFFTSSSE Trigger: TTCACTGGACGAAGTGAAGAATAGGGAGCTTGTAAAGAAGATCAAGATAGTTGGACAGGTGGAATGTCTCCAAGACCTTTCCACTCGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS CAA 90 bp | CATAGAAGGCTCCTCAAACCCTTGGGCTCTGGCCATGACCTCACTTaGCTTACAATGTATGTAGCAGGTACAGTATTTCAGTCCATATAC | + |
|
Preference number: 6 (lower is better) Translates to: HRRLLKPLGSGHDLT*LTMYVAGTVFQSIY Trigger: GTATATGGACTGAAATACTGTACCTGCTACATACATTGTAAGCAAAGTGAGGTCATGGCCAGAGCCCAAGGGTTTGAGGAGCCTTCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 72 bp | AGAGCCGGGCACCATCATCTGCAATGCCTTTGGAAATaGGTTGTGGATGTTTTGTCATACTGGTTTGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: RAGHHHLQCLWK*VVDVLSYWFEI Trigger: GATCTCAAACCAGTATGACAAAACATCCACAACTCATTTCCAAAGGCATTGCAGATGATGGTGCCCGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 72 bp | CATGGAAAGGTTGCAGATTATGCTCACTTCAACCTTTaGTGCCATCGATTGTGCATGGTTAACAGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HGKVADYAHFNL*CHRLCMVNSRA Trigger: TGCTCTGCTGTTAACCATGCACAATCGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CCA 72 bp | ATTATCAAGCAGGCTACCATGACCATGGTGAATACCTaGACCTTAATGCCAAAGGGAACTCTGGAAGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: IIKQATMTMVNT*TLMPKGTLEAN Trigger: ATTGGCTTCCAGAGTTCCCTTTGGCATTAAGGTCCAGGTATTCACCATGGTCATGGTAGCCTGCTTGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 90 bp | CTGATTTGGAGGAAGCAGGACAAGATATACGAGACATTTCCACTATaGCCTGGAGGCAATTTGCATCTCTTAAAGATGAAGAGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LIWRKQDKIYETFPL*PGGNLHLLKMKRQR Trigger: CCTCTGCCTCTTCATCTTTAAGAGATGCAAATTGCCTCCAGGCAATAGTGGAAATGTCTCGTATATCTTGTCCTGCTTCCTCCAAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 72 bp | GAAAGGAACATGAACATCCTTACAGTTAACCAAGCATaGAAATGCTCGCCTGAAAAGCCACACATGGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ERNMNILTVNQA*KCSPEKPHMAC Trigger: GCAAGCCATGTGTGGCTTTTCAGGCGAGCATTTTCATGCTTGGTTAACTGTAAGGATGTTCATGTTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454857.6 |
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| CDS GCA 72 bp | CACTGTGAGAAAGGTTTAAGACTTCCATGGAAAGGTTaGAGATTATGCTCACTTCAACCTTTGCTGCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: HCEKGLRLPWKG*RLCSLQPLLPS Trigger: CGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATGGAAGTCTTAAACCTTTCTCACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CCA 72 bp | TACAAATTGCCTTTAAATGAGAAGTTATTTGGCCTGTaGTGGGCACTGTCACCTGGAGCCAAAAGCTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: YKLPLNEKLFGL*WALSPGAKSSM Trigger: CATTGAGCTTTTGGCTCCAGGTGACAGTGCCCACCACAGGCCAAATAACTTCTCATTTAAAGGCAATTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435944.5 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 72 bp | GGGCAGAACCACTGTGAGAAAGGTTTAAGACTTCCATaGAAAGGTTGCAGATTATGCTCACTTCAACCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GQNHCEKGLRLP*KGCRLCSLQPL Trigger: CAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATGGAAGTCTTAAACCTTTCTCACAGTGGTTCTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CAA 72 bp | TCTGCAGTTTATGGAGGCCAAACACCACAGTATATGTaGCTGCTCATCGAGTATGTCATGCGGCACAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: SAVYGGQTPQYM*LLIEYVMRHKI Trigger: TATTTTGTGCCGCATGACATACTCGATGAGCAGCAACATATACTGTGGTGTTTGGCCTCCATAAACTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 72 bp | AAGGTTAAACAGCAAGTTAAGCAGGAAGTGGCAGAGTaGAAGTTGAATTTGACCCTTCCAGCTTCCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KVKQQVKQEVAE*KLNLTLPASRE Trigger: TTCCCTGGAAGCTGGAAGGGTCAAATTCAACTTCAACTCTGCCACTTCCTGCTTAACTTGCTGTTTAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 72 bp | CCGGGCACCATCATCTGCAATGCCTTTGGAAATGAGTaGTGGATGTTTTGTCATACTGGTTTGAGATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGTIICNAFGNE*WMFCHTGLRSC Trigger: ACAAGATCTCAAACCAGTATGACAAAACATCCACAACTCATTTCCAAAGGCATTGCAGATGATGGTGCCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 72 bp | CAAGCTGCTACACCACAAAATCAATGTCTACTGCAGTaGGAATCAACCAAGATCCTGTATCTCTTCCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: QAATPQNQCLLQ*ESTKILYLFPV Trigger: TACAGGGAAGAGATACAGGATCTTGGTTGATTCTCACTGCAGTAGACATTGATTTTGTGGTGTAGCAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 72 bp | TCCTTGAGAAGACAAGAAGAGATGAAGTCCATTACCTaGGTCCTCAGATGGGAACAAAGATGGGTGATCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SLRRQEEMKSIT*VLRWEQRWVIY Trigger: ATAGATCACCCATCTTTGTTCCCATCTGAGGACTCAGGTAATGGACTTCATCTCTTCTTGTCTTCTCAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS TCA 72 bp | CATGTGTCACCTTTAGGCTCAGAGTTTTGCTGGTACTaGGATAGTATATGGGCAGATATCTGCTCAGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: HVSPLGSEFCWY*DSIWADICSDR Trigger: TCTATCTGAGCAGATATCTGCCCATATACTATCTCAGTACCAGCAAAACTCTGAGCCTAAAGGTGACACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS GCA 72 bp | TCTTTCTCTTCTCTTTCCATGCTTCCCCCAAGATTGTaGTCTGTCAGCCTAGTAGGTTTAATAGGTGAACTA | + |
|
Preference number: 6 (lower is better) Translates to: SFSSLSMLPPRL*SVSLVGLIGEL Trigger: TAGTTCACCTATTAAACCTACTAGGCTGACAGAGCACAATCTTGGGGGAAGCATGGAAAGAGAAGAGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS GCA 72 bp | TTTTCAGGAAGGTTTCATAGATACATTAGGGACATCTaGACAAGAGGCCATCTATACCCTGGCGTTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSGRFHRYIRDI*TRGHLYPGVWF Trigger: AAACCAAACGCCAGGGTATAGATGGCCTCTTGTGCAGATGTCCCTAATGTATCTATGAAACCTTCCTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657543.1 |
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| CDS CCA 72 bp | CATGCGTTTGATGTCTATAGAATTGTGATGTGCGGATaGCTCCTCACATCTCCAGTGAATAAGTTGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HAFDVYRIVMCG*LLTSPVNKLLF Trigger: GAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACATCACAATTCTATAGACATCAAACGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 72 bp | GGCACCATCATCTGCAATGCCTTTGGAAATGAGTTGTaGATGTTTTGTCATACTGGTTTGAGATCTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTIICNAFGNEL*MFCHTGLRSCW Trigger: CCAACAAGATCTCAAACCAGTATGACAAAACATCCACAACTCATTTCCAAAGGCATTGCAGATGATGGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS CCA 72 bp | GCAGGACAAGATATACGAGACATTTCCACTATTGCCTaGAGGCAATTTGCATCTCTTAAAGATGAAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGQDIRDISTIA*RQFASLKDEEA Trigger: TGCCTCTTCATCTTTAAGAGATGCAAATTGCCTCCAGGCAATAGTGGAAATGTCTCGTATATCTTGTCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS CCA 72 bp | ATGGAGGTTAGAATCAAAGGCATTGCACTTGCATCTTaGTTCTTTCAGGTACTAACTCTGCCCAGTGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: MEVRIKGIALAS*FFQVLTLPSDV Trigger: AACATCACTGGGCAGAGTTAGTACCTGAAAGAACCAAGATGCAAGTGCAATGCCTTTGATTCTAACCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS CAA 72 bp | ATGTGCGGATGGCTCCTCACATCTCCAGTGAATAAGTaGCTTTTCAGAGACCTAAGCAGAATCACAAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: MCGWLLTSPVNK*LFRDLSRITNH Trigger: ATGATTTGTGATTCTGCTTAGGTCTCTGAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454857.6 |
||
| CDS CAA 72 bp | ATGTGCGGATGGCTCCTCACATCTCCAGTGAATAAGTaGCTTTTCAGAGACCTTAGAAATTCATGCAACACA | + |
|
Preference number: 6 (lower is better) Translates to: MCGWLLTSPVNK*LFRDLRNSCNT Trigger: TGTGTTGCATGAATTTCTAAGGTCTCTGAAAAGCAACTTATTCACTGGAGATGTGAGGAGCCATCCGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665675.1 |
||
| CDS CAA 90 bp | CTGTTTCTCACTGTTCAAATCTTTGCTGTTTCTCACTGTTTAACCTaGGGGAGGTTTCTTAACCTGCTTGTGCCTCTGTTTGCTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LFLTVQIFAVSHCLT*GRFLNLLVPLFAHL Trigger: CAAATGAGCAAACAGAGGCACAAGCAGGTTAAGAAACCTCCCCAAGGTTAAACAGTGAGAAACAGCAAAGATTTGAACAGTGAGAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS TCA 72 bp | CTCACTAGACAACCATTCTGCTGGTACTTTGGTCTTTaGCTTCCCATCTCCAGACTTGTGAGAAATACATTT | + |
|
Preference number: 6 (lower is better) Translates to: LTRQPFCWYFGL*LPISRLVRNTF Trigger: AAATGTATTTCTCACAAGTCTGGAGATGGGAAGTCAAAGACCAAAGTACCAGCAGAATGGTTGTCTAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS TCA 72 bp | TCCAAAGGATATGAAGGATCTGTTTCTCAAGTGTCCTaGTGTGAACAATGCCTAAAGAGAGTTCTCCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SKGYEGSVSQVS*CEQCLKRVLPQ Trigger: TTGTGGGAGAACTCTCTTTAGGCATTGTTCACATCAGGACACTTGAGAAACAGATCCTTCATATCCTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
||
| CDS TCA 72 bp | TGGGGTATTTATGCACCAACTCACATCATCATCCAGTaGAAGAGAGGGTTTTTAATTCTCAGGCACTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: WGIYAPTHIIIQ*KRGFLILRHFL Trigger: TAGGAAGTGCCTGAGAATTAAAAACCCTCTCTTTCACTGGATGATGATGTGAGTTGGTGCATAAATACCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454781.6 |
||
| CDS TCA 72 bp | GCTGGGTTAAAACACTTTCTCTGCAGATACAGGTGGTaGTTTACACACGCAGTTGAAATGAGTTCAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: AGLKHFLCRYRW*FTHAVEMSSGY Trigger: ATATCCTGAACTCATTTCAACTGCGTGTGTAAATCACCACCTGTATCTGCAGAGAAAGTGTTTTAACCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614455.4 |
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| CDS GCA 72 bp | ATAAAACATTGTACAGAAGAGCCGGGCACCATCATCTaGAATGCCTTTGGAAATGAGTTGTGGATGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: IKHCTEEPGTII*NAFGNELWMFC Trigger: ACAAAACATCCACAACTCATTTCCAAAGGCATTGCAGATGATGGTGCCCGGCTCTTCTGTACAATGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 72 bp | AAAGGTTTAAGACTTCCATGGAAAGGTTGCAGATTATaGTCACTTCAACCTTTGCTGCCATCGATTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: KGLRLPWKGCRL*SLQPLLPSIVH Trigger: ATGCACAATCGATGGCAGCAAAGGTTGAAGTGAGCATAATCTGCAACCTTTCCATGGAAGTCTTAAACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622752.1 |
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| CDS CCA 72 bp | TCAGTAGAGAGTCTCCAAACCATATTCATGAAGGACTaGATCTGTGTCTGCTTAGCTAATTCAGTAAATGCC | + |
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Preference number: 6 (lower is better) Translates to: SVESLQTIFMKD*ICVCLANSVNA Trigger: GGCATTTACTGAATTAGCTAAGCAGACACAGATCCAGTCCTTCATGAATATGGTTTGGAGACTCTCTACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | AGGAAGCAGGACAAGATATACGAGACATTTCCACTATaGCCTGGAGGCAATTTGCATCTCTTAAAGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RKQDKIYETFPL*PGGNLHLLKMK Trigger: CTTCATCTTTAAGAGATGCAAATTGCCTCCAGGCAATAGTGGAAATGTCTCGTATATCTTGTCCTGCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | CTTAGATGTAGAACATCTTTAAGGTTCTCGGTTTGTTaGTTCCGGGAGGATTCTTCTGGGTTTGCTTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRCRTSLRFSVC*FREDSSGFAFG Trigger: ACCAAAAGCAAACCCAGAAGAATCCTCCCGGAACAAACAAACCGAGAACCTTAAAGATGTTCTACATCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657543.1 |
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| CDS CAA 90 bp | TTGAGGTGTGGTGTGTGTCTGAAGTCTAAAGACTATAATGATACCTaGGGGAAGTTTCTTGTTGTCCTTATGTTTCTGAATCTCCATCGG | + |
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Preference number: 6 (lower is better) Translates to: LRCGVCLKSKDYNDT*GKFLVVLMFLNLHR Trigger: CCGATGGAGATTCAGAAACATAAGGACAACAAGAAACTTCCCCAAGGTATCATTATAGTCTTTAGACTTCAGACACACACCACACCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414722.5 |
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| CDS CAA 90 bp | GCAGTGAGAATCAACCAAGATCCTGTATCTCTTCCCTGTATGTTGTaGGTAGGTCACCCAACCAAAATGCTCTTAATTTTTAAGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: AVRINQDPVSLPCML*VGHPTKMLLIFKTK Trigger: CTTGGTCTTAAAAATTAAGAGCATTTTGGTTGGGTGACCTACCAACAACATACAGGGAAGAGATACAGGATCTTGGTTGATTCTCACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 90 bp | TTGAGGTGTGGTGTGTGTCTGAAGTCTAAAGACTATAATGATACCTaGGGGAAGTTTCTTGTTGTCCTTATGTTTCTGAATCTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LRCGVCLKSKDYNDT*GKFLVVLMFLNLHL Trigger: CAGATGGAGATTCAGAAACATAAGGACAACAAGAAACTTCCCCAAGGTATCATTATAGTCTTTAGACTTCAGACACACACCACACCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000426021.5 ENST00000435944.5 ENST00000439517.2 ENST00000454781.6 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 90 bp | TTCAATTTCTCTGCAGTTTATGGAGGCCAAACACCACAGTATATGTaGCTGCTCATCGAGTATGTCATGCGGCACAAAATAGATCAATTA | + |
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Preference number: 6 (lower is better) Translates to: FNFSAVYGGQTPQYM*LLIEYVMRHKIDQL Trigger: TAATTGATCTATTTTGTGCCGCATGACATACTCGATGAGCAGCAACATATACTGTGGTGTTTGGCCTCCATAAACTGCAGAGAAATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS GCA 72 bp | TTTTACAAGCTGCTACACCACAAAATCAATGTCTACTaGAGTGAGAATCAACCAAGATCCTGTATCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FYKLLHHKINVY*SENQPRSCISS Trigger: GGAAGAGATACAGGATCTTGGTTGATTCTCACTGCAGTAGACATTGATTTTGTGGTGTAGCAGCTTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 72 bp | ATATACGAGACATTTCCACTATTGCCTGGAGGCAATTaGCATCTCTTAAAGATGAAGAGGCAGAGGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: IYETFPLLPGGN*HLLKMKRQRLN Trigger: GTTTAACCTCTGCCTCTTCATCTTTAAGAGATGCAAATTGCCTCCAGGCAATAGTGGAAATGTCTCGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS TCA 72 bp | AAGATTGTGCTCTGTCAGCCTAGTAGGTTTAATAGGTaGACTACAAGACAGGAACAAGACAGCATTAGATAT | + |
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Preference number: 6 (lower is better) Translates to: KIVLCQPSRFNR*TTRQEQDSIRY Trigger: ATATCTAATGCTGTCTTGTTCCTGTCTTGTAGTTCACCTATTAAACCTACTAGGCTGACAGAGCACAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 72 bp | CTCCAAACCATATTCATGAAGGACTGGATCTGTGTCTaGTTAGCTAATTCAGTAAATGCCGTAGAAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LQTIFMKDWICV*LANSVNAVEKS Trigger: AGATTTTTCTACGGCATTTACTGAATTAGCTAAGCAGACACAGATCCAGTCCTTCATGAATATGGTTTGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 72 bp | AAACTTTATTTACAAAGGCAAGTAGCAGATGGAATTTaGCCCACCAGCAGTATATTGATAATCCCTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: KLYLQRQVADGI*PTSSILIIPHG Trigger: TCCATGAGGGATTATCAATATACTGCTGGTGGGCCAAATTCCATCTGCTACTTGCCTTTGTAAATAAAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CCA 72 bp | TCAGTTTTCCTAAGCCAACAGGCTTACCCTTTCTACTaGGTTACCGTAGATGGCTTTGTAAAAATAACTTTA | + |
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Preference number: 6 (lower is better) Translates to: SVFLSQQAYPFY*VTVDGFVKITL Trigger: TAAAGTTATTTTTACAAAGCCATCTACGGTAACCCAGTAGAAAGGGTAAGCCTGTTGGCTTAGGAAAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | CAAGCTCCCTATTCTTCACTTCGTCCAGTGAAATCCTaGTATAGTGTAGGTCTTTCATTAATTGCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QAPYSSLRPVKS*YSVGLSLIAFF Trigger: GAAGAATGCAATTAATGAAAGACCTACACTATACAAGGATTTCACTGGACGAAGTGAAGAATAGGGAGCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 72 bp | ATCAACCAAGATCCTGTATCTCTTCCCTGTATGTTGTaGGTAGGTCACCCAACCAAAATGCTCTTAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: INQDPVSLPCML*VGHPTKMLLIF Trigger: AAAAATTAAGAGCATTTTGGTTGGGTGACCTACCAACAACATACAGGGAAGAGATACAGGATCTTGGTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CAA 72 bp | CAAGTAGCAGATGGAATTTGGCCCACCAGCAGTATATaGATAATCCCTCATGGAACCAAATTTCTGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: QVADGIWPTSSI*IIPHGTKFLYF Trigger: AAAATACAGAAATTTGGTTCCATGAGGGATTATCAATATACTGCTGGTGGGCCAAATTCCATCTGCTACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 72 bp | AAAACTTTATTTACAAAGGCAAGTAGCAGATGGAATTaGGCCCACCAGCAGTATATTGATAATCCCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: KTLFTKASSRWN*AHQQYIDNPSW Trigger: CCATGAGGGATTATCAATATACTGCTGGTGGGCCAAATTCCATCTGCTACTTGCCTTTGTAAATAAAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435944.5 ENST00000439517.2 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 90 bp | TTGGTTATGAAGGCAGAAGAGTTCAGTGATATCCTAGGTCACCCTTaGTCCGTGCATAAAGTTTATTACTATATTTCAATTTCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LVMKAEEFSDILGHP*SVHKVYYYISISLQ Trigger: CTGCAGAGAAATTGAAATATAGTAATAAACTTTATGCACGGACAAAGGGTGACCTAGGATATCACTGAACTCTTCTGCCTTCATAACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS CCA 72 bp | CCAACAGGCTTACCCTTTCTACTGGGTTACCGTAGATaGCTTTGTAAAAATAACTTTAATGCTATAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: PTGLPFLLGYRR*LCKNNFNAIIQ Trigger: TTGGATTATAGCATTAAAGTTATTTTTACAAAGCCATCTACGGTAACCCAGTAGAAAGGGTAAGCCTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CCA 72 bp | TATAAAGGAATCTCATGGAACCTTATTAAAAGGGCATaGAGGTTAGAATCAAAGGCATTGCACTTGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: YKGISWNLIKRA*RLESKALHLHL Trigger: AAGATGCAAGTGCAATGCCTTTGATTCTAACCTCCATGCCCTTTTAATAAGGTTCCATGAGATTCCTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | GGTGTGTGTCTGAAGTCTAAAGACTATAATGATACCTaGGGGAAGTTTCTTGTTGTCCTTATGTTTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GVCLKSKDYNDT*GKFLVVLMFLN Trigger: ATTCAGAAACATAAGGACAACAAGAAACTTCCCCAAGGTATCATTATAGTCTTTAGACTTCAGACACACACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414722.5 ENST00000426021.5 ENST00000435944.5 ENST00000439517.2 ENST00000454781.6 ENST00000454857.6 ENST00000665675.1 |
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| CDS CAA 72 bp | GATGGCATGCACTACCTATTAAATCACATCTATCACTaGTGCTGTGATTTGGTTAGCACATTGTATAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: DGMHYLLNHIYH*CCDLVSTLYRN Trigger: ATTCCTATACAATGTGCTAACCAAATCACAGCACAAGTGATAGATGTGATTTAATAGGTAGTGCATGCCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 90 bp | TCTTCTTTACAAGCTCCCTATTCTTCACTTCGTCCAGTGAAATCCTaGTATAGTGTAGGTCTTTCATTAATTGCATTCTTCCCCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: SSLQAPYSSLRPVKS*YSVGLSLIAFFPNF Trigger: AAAATTGGGGAAGAATGCAATTAATGAAAGACCTACACTATACAAGGATTTCACTGGACGAAGTGAAGAATAGGGAGCTTGTAAAGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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| CDS TCA 72 bp | GAAAATCTATCTCATCTGGTTGTTATAAGAATTAACTaGGTTAATATGGGTAAGCACTTAGTGCCTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: ENLSHLVVIRIN*VNMGKHLVPGM Trigger: CATGCCAGGCACTAAGTGCTTACCCATATTAACTCAGTTAATTCTTATAACAACCAGATGAGATAGATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS GCA 72 bp | GGCATGCACTACCTATTAAATCACATCTATCACTTGTaGTGTGATTTGGTTAGCACATTGTATAGGAATAAT | + |
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Preference number: 6 (lower is better) Translates to: GMHYLLNHIYHL*CDLVSTLYRNN Trigger: ATTATTCCTATACAATGTGCTAACCAAATCACAGCACAAGTGATAGATGTGATTTAATAGGTAGTGCATGCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454781.6 |
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| CDS CAA 72 bp | AAGGCAGAAGAGTTCAGTGATATCCTAGGTCACCCTTaGTCCGTGCATAAAGTTTATTACTATATTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: KAEEFSDILGHP*SVHKVYYYISI Trigger: AATTGAAATATAGTAATAAACTTTATGCACGGACAAAGGGTGACCTAGGATATCACTGAACTCTTCTGCCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426021.5 |
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