Pregenerated sensors for CASC18 (Homo sapiens)
Ensembl gene IDs: ENSG00000257859Ensembl transcript IDs: ENST00000547465.1, ENST00000548557.1, ENST00000656319.1, ENST00000670167.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGAAGTAGGATTGGAGCATCTGGGGAGCAGACACTCATGGGTGTaGGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GEVGLEHLGSRHSWV*AEGSLFREPLSACW Trigger: CCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCCCACACCCATGAGTGTCTGCTCCCCAGATGCTCCAATCCTACTTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 90 bp | TGGGTGTGGGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTTaGTGGAATTTCAGCCATCTTCAGTCCCGTCAGGCACTCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: WVWAEGSLFREPLSA*WNFSHLQSRQALCS Trigger: TGAGCAGAGTGCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCCCACACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 90 bp | CTCATGGGTGTGGGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTaGTTGCTGGAATTTCAGCCATCTTCAGTCCCGTCAGGCACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LMGVGGGEPLQRTTV*LLEFQPSSVPSGTL Trigger: CAGAGTGCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCCCACACCCATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 90 bp | TCCCGTCAGGCACTCTGCTCAAGATTTCCATCCAGGGATAAGGGATaGGCCCTGTTTGAGTTTCAGGCTGCCCTTGGCCAGAGGCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SRQALCSRFPSRDKG*ALFEFQAALGQRQG Trigger: GCCTTGCCTCTGGCCAAGGGCAGCCTGAAACTCAAACAGGGCCCATCCCTTATCCCTGGATGGAAATCTTGAGCAGAGTGCCTGACGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 90 bp | GGCACGATCACTACGGGGAGAATCAGAAACCACGCGATCGCCAGGTaGCCTTCAAAGAAGCCTCCTCCCAGAAGGTCCAGAATCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: GTITTGRIRNHAIAR*PSKKPPPRRSRIPS Trigger: GGATGGGATTCTGGACCTTCTGGGAGGAGGCTTCTTTGAAGGCCACCTGGCGATCGCGTGGTTTCTGATTCTCCCCGTAGTGATCGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656319.1 |
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| CDS CCA 90 bp | GTGTGGGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTTGCTaGAATTTCAGCCATCTTCAGTCCCGTCAGGCACTCTGCTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: VWAEGSLFREPLSAC*NFSHLQSRQALCSR Trigger: TCTTGAGCAGAGTGCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 90 bp | AAAGCTGGAGAAGTAGGATTGGAGCATCTGGGGAGCAGACACTCATaGGTGTGGGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KAGEVGLEHLGSRHS*VWAEGSLFREPLSA Trigger: AGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCCCACACCCATGAGTGTCTGCTCCCCAGATGCTCCAATCCTACTTCTCCAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | GAGCCTTATGGTGTCTTCCCAGTGACATTTTCTGTACGAGTCATGTaGCTGTGTCCAGGACACGAGACAGGGTGGCCCAAGGACAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: EPYGVFPVTFSVRVM*LCPGHETGWPKDKP Trigger: GGGCTTGTCCTTGGGCCACCCTGTCTCGTGTCCTGGACACAGTCACATGACTCGTACAGAAAATGTCACTGGGAAGACACCATAAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | CCACCATGGTTCACAGGACAGGCTCTCATCCTCCAAGGGGGCTTCTaGTGCAAGTGGGTTGAAAGATGGACAGAAGCAGGCATATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PPWFTGQALILQGGF*CKWVERWTEAGIFQ Trigger: CTGGAATATGCCTGCTTCTGTCCATCTTTCAACCCACTTGCATCAGAAGCCCCCTTGGAGGATGAGAGCCTGTCCTGTGAACCATGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | ATTGCTCTAAATTCCTGGTGTTCCACACTCTGCTGTGTTCCACTCTaGACCACCATGGTTCACAGGACAGGCTCTCATCCTCCAAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: IALNSWCSTLCCVPL*TTMVHRTGSHPPRG Trigger: CCCCCTTGGAGGATGAGAGCCTGTCCTGTGAACCATGGTGGTTCAGAGTGGAACACAGCAGAGTGTGGAACACCAGGAATTTAGAGCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 90 bp | AGCTACACAGAGGCATCCCATAGCCCCCTAGAGGAGCTCCTCCTTTaGTTTCCATTCAATCCCAGAGCTGTGGGATTCTCCTGCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: SYTEASHSPLEELLL*FPFNPRAVGFSCIS Trigger: AGAAATGCAGGAGAATCCCACAGCTCTGGGATTGAATGGAAAGCAAAGGAGGAGCTCCTCTAGGGGGCTATGGGATGCCTCTGTGTAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 90 bp | GTCAGGAGAGTCCCAAGAAGAAGGATCATATCTGGTTTCCTCTTCTaGCTCTCCCCATGGTGTCTAGGAGAGTGCACACTCAGTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VRRVPRRRIISGFLF*LSPWCLGECTLSQH Trigger: ATGCTGACTGAGTGTGCACTCTCCTAGACACCATGGGGAGAGGCAGAAGAGGAAACCAGATATGATCCTTCTTCTTGGGACTCTCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | AGAGTTCAGGGAACCTGGTCTAAGTACACTCCAGGGGTCCAGGTTTaGCCCGCAGACTTGGTACACACAGCAATCAACAATCAACCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RVQGTWSKYTPGVQV*PADLVHTAINNQPV Trigger: AACTGGTTGATTGTTGATTGCTGTGTGTACCAAGTCTGCGGGTCAAACCTGGACCCCTGGAGTGTACTTAGACCAGGTTCCCTGAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS CCA 90 bp | TCTCTTTTCCTAGGTCAGGAGAGTCCCAAGAAGAAGGATCATATCTaGTTTCCTCTTCTGCCTCTCCCCATGGTGTCTAGGAGAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: SLFLGQESPKKKDHI*FPLLPLPMVSRRVH Trigger: GTGCACTCTCCTAGACACCATGGGGAGAGGCAGAAGAGGAAACCAGATATGATCCTTCTTCTTGGGACTCTCCTGACCTAGGAAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 90 bp | ATTCCAAAGCACTTTCTTCTTTGCCCTCCCTGCATGGGAAGTCTTTaGGGTCATTTCTACCAGTGGATGGAACCTCAGGCCAGTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: IPKHFLLCPPCMGSL*GHFYQWMEPQASLL Trigger: AAGCAAACTGGCCTGAGGTTCCATCCACTGGTAGAAATGACCCCAAAGACTTCCCATGCAGGGAGGGCAAAGAAGAAAGTGCTTTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548557.1 ENST00000656319.1 |
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| CDS TCA 90 bp | AGGTCACTGTGTCGTGAAAAGATGAGCCTTATGGTGTCTTCCCAGTaGCATTTTCTGTACGAGTCATGTGACTGTGTCCAGGACACGAGA | + |
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Preference number: 5 (lower is better) Translates to: RSLCREKMSLMVSSQ*HFLYESCDCVQDTR Trigger: TCTCGTGTCCTGGACACAGTCACATGACTCGTACAGAAAATGTCACTGGGAAGACACCATAAGGCTCATCTTTTCACGACACAGTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | TTGATGCCAATAAAGCCCTTGAGTCTAGCCTGTGCGTGTATTAAATaGGATGACAGAAGACAAGGCCGTGGTCAGAGTTCAGGGAACCTG | + |
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Preference number: 5 (lower is better) Translates to: LMPIKPLSLACACIK*DDRRQGRGQSSGNL Trigger: CAGGTTCCCTGAACTCTGACCACGGCCTTGTCTTCTGTCATCTCATTTAATACACGCACAGGCTAGACTCAAGGGCTTTATTGGCATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS GCA 90 bp | ACAGAAGTAAAGCAGTGGCCATTACTCTCAGCAGGTCGTTTACTCTaGATCCAGCCCATACTCTTGAATGCTGACCTACTGACCAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: TEVKQWPLLSAGRLL*IQPILLNADLLTKQ Trigger: TTGCTTGGTCAGTAGGTCAGCATTCAAGAGTATGGGCTGGATGCAGAGTAAACGACCTGCTGAGAGTAATGGCCACTGCTTTACTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 90 bp | CAAAAGAGGAGCTTGTTCAGGATTTTGAAGACAGAAGTAAAGCAGTaGCCATTACTCTCAGCAGGTCGTTTACTCTGCATCCAGCCCATA | + |
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Preference number: 5 (lower is better) Translates to: QKRSLFRILKTEVKQ*PLLSAGRLLCIQPI Trigger: TATGGGCTGGATGCAGAGTAAACGACCTGCTGAGAGTAATGGCCACTGCTTTACTTCTGTCTTCAAAATCCTGAACAAGCTCCTCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | AATATCTGGAACAGCCTCCACAGCCAAGTGAATGAGTCAGTCTTCTaGGTTGATTCAAATCCCCAGAGACTTAGTTCCAGAAGCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: NIWNSLHSQVNESVF*VDSNPQRLSSRSFQ Trigger: TTGGAAGCTTCTGGAACTAAGTCTCTGGGGATTTGAATCAACTCAGAAGACTGACTCATTCACTTGGCTGTGGAGGCTGTTCCAGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | GTGCACACTCAGTCAGCATTGATAACTAACTTTAAATCTATGCGATaGAGGGTCCATAGTAATCCACCAGGGATTCACAGGGTGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: VHTQSALITNFKSMR*RVHSNPPGIHRVNG Trigger: CCCATTCACCCTGTGAATCCCTGGTGGATTACTATGGACCCTTCATCGCATAGATTTAAAGTTAGTTATCAATGCTGACTGAGTGTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS GCA 90 bp | AGGCAAGTTTGCTACGGCTGTTTCATTTCTGTGTTGTCCAACAACTaGTCAAATCTCAATCCCTTCTCTCCAGTCAAATGCATCTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: RQVCYGCFISVLSNN*SNLNPFSPVKCIFW Trigger: CCAAAAGATGCATTTGACTGGAGAGAAGGGATTGAGATTTGAGCAGTTGTTGGACAACACAGAAATGAAACAGCCGTAGCAAACTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | TTTTCCAGACGTCTCTTTTTATCTAGATCTCAGTTACAGGGAGTCTaGAAAGTCCCATTATCTCAGCAGAGAAATCACGGCAGGCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: FSRRLFLSRSQLQGV*KVPLSQQRNHGRQV Trigger: AACTTGCCTGCCGTGATTTCTCTGCTGAGATAATGGGACTTTTCAGACTCCCTGTAACTGAGATCTAGATAAAAAGAGACGTCTGGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | CCCAGATGGTATTTGTATTTCCAAGAGACCCAGCATTTCAAAGTCTaGCATATGCCACACTCAGATAGTTATGAAAGCAAAGCCAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: PRWYLYFQETQHFKV*HMPHSDSYESKAKR Trigger: TCGCTTGGCTTTGCTTTCATAACTATCTGAGTGTGGCATATGTCAGACTTTGAAATGCTGGGTCTCTTGGAAATACAAATACCATCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 90 bp | TCTCAAAGAGAAATCAAGATGTCCATAACAGAGGTCACTGTGTCGTaGAAAGATGAGCCTTATGGTGTCTTCCCAGTGACATTTTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SQREIKMSITEVTVS*KDEPYGVFPVTFSV Trigger: TACAGAAAATGTCACTGGGAAGACACCATAAGGCTCATCTTTTCACGACACAGTGACCTCTGTTATGGACATCTTGATTTCTCTTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 90 bp | GGTATTTGTATTTCCAAGAGACCCAGCATTTCAAAGTCTGACATATaGCACACTCAGATAGTTATGAAAGCAAAGCCAAGCGACAATTGG | + |
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Preference number: 5 (lower is better) Translates to: GICISKRPSISKSDI*HTQIVMKAKPSDNW Trigger: CCAATTGTCGCTTGGCTTTGCTTTCATAACTATCTGAGTGTGGCATATGTCAGACTTTGAAATGCTGGGTCTCTTGGAAATACAAATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | GTTTCAGGCTGCCCTTGGCCAGAGGCAAGGCGGACTTaGCTGCTAGACTATACACACTGGGGGAGGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: VSGCPWPEARRT*LLDYTHWGRDG Trigger: GCCATCCCTCCCCCAGTGTGTATAGTCTAGCAGCCAAGTCCGCCTTGCCTCTGGCCAAGGGCAGCCTGAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 72 bp | AGTTTCAGGCTGCCCTTGGCCAGAGGCAAGGCGGACTaGGCTGCTAGACTATACACACTGGGGGAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: SFRLPLARGKAD*AARLYTLGEGW Trigger: CCATCCCTCCCCCAGTGTGTATAGTCTAGCAGCCAAGTCCGCCTTGCCTCTGGCCAAGGGCAGCCTGAAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 90 bp | ATGGGTGTGGGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTaGCTGGAATTTCAGCCATCTTCAGTCCCGTCAGGCACTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: MGVGGGEPLQRTTVC*LEFQPSSVPSGTLL Trigger: GAGCAGAGTGCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCCCACACCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | GAAGTAGGATTGGAGCATCTGGGGAGCAGACACTCATaGGTGTGGGCGGAGGGGAGCCTCTTCAGAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: EVGLEHLGSRHS*VWAEGSLFREP Trigger: TGGTTCTCTGAAGAGGCTCCCCTCCGCCCACACCCATGAGTGTCTGCTCCCCAGATGCTCCAATCCTACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 72 bp | GGCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTaGCTGGAATTTCAGCCATCTTCAGTCCCGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GGGEPLQRTTVC*LEFQPSSVPSG Trigger: GCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 90 bp | CCCTGTTTGAGTTTCAGGCTGCCCTTGGCCAGAGGCAAGGCGGACTaGGCTGCTAGACTATACACACTGGGGGAGGGATGGCTTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PCLSFRLPLARGKAD*AARLYTLGEGWLLK Trigger: TTTGAGAAGCCATCCCTCCCCCAGTGTGTATAGTCTAGCAGCCAAGTCCGCCTTGCCTCTGGCCAAGGGCAGCCTGAAACTCAAACAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 90 bp | CACTCTGCTCAAGATTTCCATCCAGGGATAAGGGATGGGCCCTGTTaGAGTTTCAGGCTGCCCTTGGCCAGAGGCAAGGCGGACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HSAQDFHPGIRDGPC*SFRLPLARGKADLA Trigger: AGCCAAGTCCGCCTTGCCTCTGGCCAAGGGCAGCCTGAAACTCAAACAGGGCCCATCCCTTATCCCTGGATGGAAATCTTGAGCAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 72 bp | GCGGAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTTaGTGGAATTTCAGCCATCTTCAGTCCCGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: AEGSLFREPLSA*WNFSHLQSRQA Trigger: TGCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | ACTACGGGGAGAATCAGAAACCACGCGATCGCCAGGTaGCCTTCAAAGAAGCCTCCTCCCAGAAGGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TTGRIRNHAIAR*PSKKPPPRRSR Trigger: TCTGGACCTTCTGGGAGGAGGCTTCTTTGAAGGCCACCTGGCGATCGCGTGGTTTCTGATTCTCCCCGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656319.1 |
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| CDS CCA 72 bp | CAGGACACGAGACAGGGTGGCCCAAGGACAAGCCCCTaGTCTCGGTATTATGTTTCCAGCTCCTCATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QDTRQGGPRTSP*SRYYVSSSSFP Trigger: AGGAAATGAGGAGCTGGAAACATAATACCGAGACCAGGGGCTTGTCCTTGGGCCACCCTGTCTCGTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | GAGGGGAGCCTCTTCAGAGAACCACTGTCTGCTTGCTaGAATTTCAGCCATCTTCAGTCCCGTCAGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: EGSLFREPLSAC*NFSHLQSRQAL Trigger: GAGTGCCTGACGGGACTGAAGATGGCTGAAATTCCAGCAAGCAGACAGTGGTTCTCTGAAGAGGCTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | GGTGTCTTCCCAGTGACATTTTCTGTACGAGTCATGTaGCTGTGTCCAGGACACGAGACAGGGTGGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GVFPVTFSVRVM*LCPGHETGWPK Trigger: CTTGGGCCACCCTGTCTCGTGTCCTGGACACAGTCACATGACTCGTACAGAAAATGTCACTGGGAAGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | TTCACAGGACAGGCTCTCATCCTCCAAGGGGGCTTCTaGTGCAAGTGGGTTGAAAGATGGACAGAAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: FTGQALILQGGF*CKWVERWTEAG Trigger: GCCTGCTTCTGTCCATCTTTCAACCCACTTGCATCAGAAGCCCCCTTGGAGGATGAGAGCCTGTCCTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | CCCTGCATGGGAAGTCTTTGGGGTCATTTCTACCAGTaGATGGAACCTCAGGCCAGTTTGCTTCCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: PCMGSLWGHFYQ*MEPQASLLPTT Trigger: TGTGGTGGGAAGCAAACTGGCCTGAGGTTCCATCCACTGGTAGAAATGACCCCAAAGACTTCCCATGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548557.1 ENST00000656319.1 |
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| CDS CCA 72 bp | CACTTTCTTCTTTGCCCTCCCTGCATGGGAAGTCTTTaGGGTCATTTCTACCAGTGGATGGAACCTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HFLLCPPCMGSL*GHFYQWMEPQA Trigger: GGCCTGAGGTTCCATCCACTGGTAGAAATGACCCCAAAGACTTCCCATGCAGGGAGGGCAAAGAAGAAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548557.1 ENST00000656319.1 |
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| CDS CAA 72 bp | CTCTCATCCTCCAAGGGGGCTTCTGATGCAAGTGGGTaGAAAGATGGACAGAAGCAGGCATATTCCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LSSSKGASDASG*KDGQKQAYSRH Trigger: GTGCCTGGAATATGCCTGCTTCTGTCCATCTTTCAACCCACTTGCATCAGAAGCCCCCTTGGAGGATGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 90 bp | CTGCCTCTCCCCATGGTGTCTAGGAGAGTGCACACTCAGTCAGCATaGATAACTAACTCTGCTGCCATTCTTTTCCAGGGCCCAGAACAA | + |
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Preference number: 6 (lower is better) Translates to: LPLPMVSRRVHTQSA*ITNSAAILFQGPEQ Trigger: TTGTTCTGGGCCCTGGAAAAGAATGGCAGCAGAGTTAGTTATCAATGCTGACTGAGTGTGCACTCTCCTAGACACCATGGGGAGAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547465.1 |
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| CDS TCA 72 bp | AATTCCTGGTGTTCCACACTCTGCTGTGTTCCACTCTaGACCACCATGGTTCACAGGACAGGCTCTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: NSWCSTLCCVPL*TTMVHRTGSHP Trigger: AGGATGAGAGCCTGTCCTGTGAACCATGGTGGTTCAGAGTGGAACACAGCAGAGTGTGGAACACCAGGAATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | GGAACCTGGTCTAAGTACACTCCAGGGGTCCAGGTTTaGCCCGCAGACTTGGTACACACAGCAATCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: GTWSKYTPGVQV*PADLVHTAINN Trigger: ATTGTTGATTGCTGTGTGTACCAAGTCTGCGGGTCAAACCTGGACCCCTGGAGTGTACTTAGACCAGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS GCA 72 bp | GTCCCAAGAAGAAGGATCATATCTGGTTTCCTCTTCTaGCTCTCCCCATGGTGTCTAGGAGAGTGCACACTC | + |
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Preference number: 6 (lower is better) Translates to: VPRRRIISGFLF*LSPWCLGECTL Trigger: GAGTGTGCACTCTCCTAGACACCATGGGGAGAGGCAGAAGAGGAAACCAGATATGATCCTTCTTCTTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | CTAGGTCAGGAGAGTCCCAAGAAGAAGGATCATATCTaGTTTCCTCTTCTGCCTCTCCCCATGGTGTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: LGQESPKKKDHI*FPLLPLPMVSR Trigger: CCTAGACACCATGGGGAGAGGCAGAAGAGGAAACCAGATATGATCCTTCTTCTTGGGACTCTCCTGACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | GAGGCAAGGCGGACTTGGCTGCTAGACTATACACACTaGGGGAGGGATGGCTTCTCAAAGAGAAATCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EARRTWLLDYTH*GRDGFSKRNQD Trigger: ATCTTGATTTCTCTTTGAGAAGCCATCCCTCCCCCAGTGTGTATAGTCTAGCAGCCAAGTCCGCCTTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 90 bp | CAGGACAGGCTCTCATCCTCCAAGGGGGCTTCTGATGCAAGTGGGTaGAAAGATGGACAGAAGCAGGCATATTCCAGGCACTTAAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: QDRLSSSKGASDASG*KDGQKQAYSRHLKV Trigger: TACTTTTAAGTGCCTGGAATATGCCTGCTTCTGTCCATCTTTCAACCCACTTGCATCAGAAGCCCCCTTGGAGGATGAGAGCCTGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 90 bp | CCATTACTCTCAGCAGGTCGTTTACTCTGCATCCAGCCCATACTCTaGAATGCTGACCTACTGACCAAGCAAATTCTCATCCATGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PLLSAGRLLCIQPIL*NADLLTKQILIHGP Trigger: GGGGCCATGGATGAGAATTTGCTTGGTCAGTAGGTCAGCATTCAAGAGTATGGGCTGGATGCAGAGTAAACGACCTGCTGAGAGTAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 72 bp | AAGCAGTGGCCATTACTCTCAGCAGGTCGTTTACTCTaGATCCAGCCCATACTCTTGAATGCTGACCTACTG | + |
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Preference number: 6 (lower is better) Translates to: KQWPLLSAGRLL*IQPILLNADLL Trigger: CAGTAGGTCAGCATTCAAGAGTATGGGCTGGATGCAGAGTAAACGACCTGCTGAGAGTAATGGCCACTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | AGTACACTCCAGGGGTCCAGGTTTGACCCGCAGACTTaGTACACACAGCAATCAACAATCAACCAGTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: STLQGSRFDPQT*YTQQSTINQFV Trigger: GACAAACTGGTTGATTGTTGATTGCTGTGTGTACCAAGTCTGCGGGTCAAACCTGGACCCCTGGAGTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS CAA 72 bp | CCCATGGTGTCTAGGAGAGTGCACACTCAGTCAGCATaGATAACTAACTCTGCTGCCATTCTTTTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PMVSRRVHTQSA*ITNSAAILFQG Trigger: GCCCTGGAAAAGAATGGCAGCAGAGTTAGTTATCAATGCTGACTGAGTGTGCACTCTCCTAGACACCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547465.1 |
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| CDS CAA 90 bp | TGGTTCCAGGTTAGAGTTGGCCAAAAGAGGAGCTTGTTCAGGATTTaGAAGACAGAAGTAAAGCAGTGGCCATTACTCTCAGCAGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: WFQVRVGQKRSLFRI*KTEVKQWPLLSAGR Trigger: ACGACCTGCTGAGAGTAATGGCCACTGCTTTACTTCTGTCTTCAAAATCCTGAACAAGCTCCTCTTTTGGCCAACTCTAACCTGGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 72 bp | AACTGCTCAAATCTCAATCCCTTCTCTCCAGTCAAATaGATCTTTTGGCCCAAATCCGGGGCTCCACATACA | + |
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Preference number: 6 (lower is better) Translates to: NCSNLNPFSPVK*IFWPKSGAPHT Trigger: TGTATGTGGAGCCCCGGATTTGGGCCAAAAGATGCATTTGACTGGAGAGAAGGGATTGAGATTTGAGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 72 bp | AAATCTCAATCCCTTCTCTCCAGTCAAATGCATCTTTaGGCCCAAATCCGGGGCTCCACATACATAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KSQSLLSSQMHL*AQIRGSTYIAP Trigger: AGGAGCTATGTATGTGGAGCCCCGGATTTGGGCCAAAAGATGCATTTGACTGGAGAGAAGGGATTGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | AACAGCCTCCACAGCCAAGTGAATGAGTCAGTCTTCTaGGTTGATTCAAATCCCCAGAGACTTAGTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NSLHSQVNESVF*VDSNPQRLSSR Trigger: TCTGGAACTAAGTCTCTGGGGATTTGAATCAACTCAGAAGACTGACTCATTCACTTGGCTGTGGAGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | ATAAAGCCCTTGAGTCTAGCCTGTGCGTGTATTAAATaGGATGACAGAAGACAAGGCCGTGGTCAGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: IKPLSLACACIK*DDRRQGRGQSS Trigger: TGAACTCTGACCACGGCCTTGTCTTCTGTCATCTCATTTAATACACGCACAGGCTAGACTCAAGGGCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS GCA 72 bp | CCATTATCTCAGCAGAGAAATCACGGCAGGCAAGTTTaGTACGGCTGTTTCATTTCTGTGTTGTCCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: PLSQQRNHGRQV*YGCFISVLSNN Trigger: GTTGTTGGACAACACAGAAATGAAACAGCCGTAGCAAACTTGCCTGCCGTGATTTCTCTGCTGAGATAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 72 bp | CCCATGGTGTCTAGGAGAGTGCACACTCAGTCAGCATaGATAACTAACTCTGATACATTCAGGAGGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PMVSRRVHTQSA*ITNSDTFRRRK Trigger: TTTCCTCCTCCTGAATGTATCAGAGTTAGTTATCAATGCTGACTGAGTGTGCACTCTCCTAGACACCATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548557.1 ENST00000656319.1 |
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| CDS CAA 72 bp | GCATGGTTCCAGGTTAGAGTTGGCCAAAAGAGGAGCTaGTTCAGGATTTTGAAGACAGAAGTAAAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: AWFQVRVGQKRS*FRILKTEVKQW Trigger: CCACTGCTTTACTTCTGTCTTCAAAATCCTGAACAAGCTCCTCTTTTGGCCAACTCTAACCTGGAACCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 72 bp | TGCTACGGCTGTTTCATTTCTGTGTTGTCCAACAACTaGTCAAATCTCAATCCCTTCTCTCCAGTCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: CYGCFISVLSNN*SNLNPFSPVKC Trigger: GCATTTGACTGGAGAGAAGGGATTGAGATTTGAGCAGTTGTTGGACAACACAGAAATGAAACAGCCGTAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547465.1 ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | CCAGCTCCTCATTTCCTACTGAGTAGCCTAGGTTTCTaGGAATTATCCAGACCCAGATGGTATTTGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: PAPHFLLSSLGF*ELSRPRWYLYF Trigger: GAAATACAAATACCATCTGGGTCTGGATAATTCCCAGAAACCTAGGCTACTCAGTAGGAAATGAGGAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | AGCTTGTTCAGGATTTTGAAGACAGAAGTAAAGCAGTaGCCATTACTCTCAGCAGGTCGTTTACTCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: SLFRILKTEVKQ*PLLSAGRLLCI Trigger: GATGCAGAGTAAACGACCTGCTGAGAGTAATGGCCACTGCTTTACTTCTGTCTTCAAAATCCTGAACAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | CGTCTCTTTTTATCTAGATCTCAGTTACAGGGAGTCTaGAAAGTCCCATTATCTCAGCAGAGAAATCACGGC | + |
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Preference number: 6 (lower is better) Translates to: RLFLSRSQLQGV*KVPLSQQRNHG Trigger: GCCGTGATTTCTCTGCTGAGATAATGGGACTTTTCAGACTCCCTGTAACTGAGATCTAGATAAAAAGAGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | TGGTACACACAGCAATCAACAATCAACCAGTTTGTCTaGCTGATTAATGACAACTGCCAAAAGGGGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: WYTQQSTINQFV*LINDNCQKGSH Trigger: GTGTGACCCCTTTTGGCAGTTGTCATTAATCAGTCAGACAAACTGGTTGATTGTTGATTGCTGTGTGTACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS CAA 72 bp | GTTAGAGTTGGCCAAAAGAGGAGCTTGTTCAGGATTTaGAAGACAGAAGTAAAGCAGTGGCCATTACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VRVGQKRSLFRI*KTEVKQWPLLS Trigger: TGAGAGTAATGGCCACTGCTTTACTTCTGTCTTCAAAATCCTGAACAAGCTCCTCTTTTGGCCAACTCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS TCA 72 bp | CAGTCAGCATTGATAACTAACTTTAAATCTATGCGATaGAGGGTCCATAGTAATCCACCAGGGATTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: QSALITNFKSMR*RVHSNPPGIHR Trigger: CCTGTGAATCCCTGGTGGATTACTATGGACCCTTCATCGCATAGATTTAAAGTTAGTTATCAATGCTGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS GCA 72 bp | ATTTCCAAGAGACCCAGCATTTCAAAGTCTGACATATaGCACACTCAGATAGTTATGAAAGCAAAGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: ISKRPSISKSDI*HTQIVMKAKPS Trigger: GCTTGGCTTTGCTTTCATAACTATCTGAGTGTGGCATATGTCAGACTTTGAAATGCTGGGTCTCTTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | AGTAGCCTAGGTTTCTGGGAATTATCCAGACCCAGATaGTATTTGTATTTCCAAGAGACCCAGCATTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SSLGFWELSRPR*YLYFQETQHFK Trigger: TTTGAAATGCTGGGTCTCTTGGAAATACAAATACCATCTGGGTCTGGATAATTCCCAGAAACCTAGGCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CCA 72 bp | CATAGTAATCCACCAGGGATTCACAGGGTGAATGGGTaGGTGAAGAATCTGGCTACAATAGCTATTTATAAT | + |
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Preference number: 6 (lower is better) Translates to: HSNPPGIHRVNG*VKNLATIAIYN Trigger: ATTATAAATAGCTATTGTAGCCAGATTCTTCACCCACCCATTCACCCTGTGAATCCCTGGTGGATTACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670167.1 |
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| CDS TCA 72 bp | AAAAGGAACAGGTTTCCAGGCATTCCACTATTGTATTaGTCAGTTACTGCAACTTTTCGGGATGTAAATGTC | + |
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Preference number: 6 (lower is better) Translates to: KRNRFPGIPLLY*SVTATFRDVNV Trigger: GACATTTACATCCCGAAAAGTTGCAGTAACTGATCAATACAATAGTGGAATGCCTGGAAACCTGTTCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS GCA 72 bp | GTTTCCAGGCATTCCACTATTGTATTGATCAGTTACTaGAACTTTTCGGGATGTAAATGTCATAATAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: VSRHSTIVLISY*NFSGCKCHNSD Trigger: GTCACTATTATGACATTTACATCCCGAAAAGTTGCAGTAACTGATCAATACAATAGTGGAATGCCTGGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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| CDS CAA 72 bp | AAAAAGGAACAGGTTTCCAGGCATTCCACTATTGTATaGATCAGTTACTGCAACTTTTCGGGATGTAAATGT | + |
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Preference number: 6 (lower is better) Translates to: KKEQVSRHSTIV*ISYCNFSGCKC Trigger: ACATTTACATCCCGAAAAGTTGCAGTAACTGATCAATACAATAGTGGAATGCCTGGAAACCTGTTCCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000548557.1 ENST00000656319.1 ENST00000670167.1 |
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