Pregenerated sensors for CASC17 (Homo sapiens)
Ensembl gene IDs: ENSG00000260785Ensembl transcript IDs: ENST00000569074.1, ENST00000659322.1, ENST00000659670.1, ENST00000662323.1, ENST00000662349.1, ENST00000664372.1, ENST00000664398.1, ENST00000665992.1, ENST00000667642.1, ENST00000668160.1, ENST00000668920.1, ENST00000669182.1, ENST00000669562.1, ENST00000671130.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTCTAACAGTCAGGCCCCTCTGCTGCAGGTGTGCTGGAGTTTGCTaGAGGTCCACTCCAGACCCTGTTTGCTTGGGTATCACCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LLTVRPLCCRCAGVC*RSTPDPVCLGITSR Trigger: TCTGCTGGTGATACCCAAGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAGCACACCTGCAGCAGAGGGGCCTGACTGTTAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000662323.1 ENST00000665992.1 ENST00000668920.1 ENST00000669182.1 |
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| CDS GCA 90 bp | ACTGGGAGCTGCAGACTGAAGCTACTTCTATTTGACCATCTTGCCTaGCACCTTGACCCCGTCTCCTTGGCATTTCAAGCCTGCATGGCT | + |
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Preference number: 5 (lower is better) Translates to: TGSCRLKLLLFDHLA*HLDPVSLAFQACMA Trigger: AGCCATGCAGGCTTGAAATGCCAAGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664372.1 |
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| CDS TCA 90 bp | AGAAACCACCTGCCTTCTGTGTTGATCTCACTGGGAGCTGCAGACTaGAGCTACTTCTATTTGACCATCTTGCCTGCCACCTTGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: RNHLPSVLISLGAAD*SYFYLTILPATLTP Trigger: CGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGTGAGATCAACACAGAAGGCAGGTGGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000659670.1 ENST00000662323.1 ENST00000668920.1 ENST00000669182.1 |
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| CDS GCA 90 bp | ACTGGGAGCTGCAGACTGAAGCTACTTCTATTTGACCATCTTGCCTaGCACCTTGACCCCGTCTCCCTGGTACCTTCCAGATTCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: TGSCRLKLLLFDHLA*HLDPVSLVPSRFSL Trigger: AAGAGAGAATCTGGAAGGTACCAGGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS GCA 90 bp | GAGTCTTCTCATTATGGAAAAATCTCTGTGACTGTGGCTGGCCATTaGCCTACCCATGCCACAGGTCGAATTCTTGGGAAGCAGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ESSHYGKISVTVAGH*PTHATGRILGKQAL Trigger: CAGAGCCTGCTTCCCAAGAATTCGACCTGTGGCATGGGTAGGGCAATGGCCAGCCACAGTCACAGAGATTTTTCCATAATGAGAAGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS TCA 90 bp | TTGACCATCTTGCCTGCCACCTTGACCCCGTCTCCTTATGTCCACTaGAGTCTTGTAAGTTCTACCATCATAGCCACCTCCTCAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LTILPATLTPSPYVH*SLVSSTIIATSSGK Trigger: TTTCCCTGAGGAGGTGGCTATGATGGTAGAACTTACAAGACTTCAGTGGACATAAGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000668920.1 |
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| CDS TCA 90 bp | TTGGCATTGTTTCCTTCTGTGTTGATCTCACTGGGAGCTGCAGACTaGAGCTACTTCTATTTGACCATCTTGCCTGCCACCTTGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: LALFPSVLISLGAAD*SYFYLTILPATLTP Trigger: CGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGTGAGATCAACACAGAAGGAAACAATGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000662349.1 ENST00000664372.1 ENST00000668160.1 |
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| CDS GCA 90 bp | ACTGGGAGCTGCAGACTGAAGCTACTTCTATTTGACCATCTTGCCTaGCACCTTGACCCCGTCTCCTTATGTCCACTGAAGTCTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: TGSCRLKLLLFDHLA*HLDPVSLCPLKSCK Trigger: CTTACAAGACTTCAGTGGACATAAGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000668920.1 |
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| CDS CCA 90 bp | TACTTCTATTTGACCATCTTGCCTGCCACCTTGACCCCGTCTCCCTaGTACCTTCCAGATTCTCTCTTGTCATTCCAGCCTAGGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: YFYLTILPATLTPSP*YLPDSLLSFQPRVN Trigger: GTTTACCCTAGGCTGGAATGACAAGAGAGAATCTGGAAGGTACCAGGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS CCA 90 bp | GCAGCCTTATCAGTAGGGCGGCATTTGGCACCATCTTTAGGGATGTaGTCACATCACTCAGGCTCTTTGATCTCAGAACCTTCATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: AALSVGRHLAPSLGM*SHHSGSLISEPSSL Trigger: CAAAGATGAAGGTTCTGAGATCAAAGAGCCTGAGTGATGTGACCACATCCCTAAAGATGGTGCCAAATGCCGCCCTACTGATAAGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS TCA 90 bp | CACTGCAGACTACTTTGCAGAGCCTCCTTGCTTCCTTATGTCCACTaGAGTCTTGTAAGTTCTACCATCATAGCCACCTCCTCAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: HCRLLCRASLLPYVH*SLVSSTIIATSSGK Trigger: TTTCCCTGAGGAGGTGGCTATGATGGTAGAACTTACAAGACTTCAGTGGACATAAGGAAGCAAGGAGGCTCTGCAAAGTAGTCTGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659322.1 ENST00000664372.1 |
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| CDS CCA 90 bp | TCAACAAGAGTCTTCTCATTATGGAAAAATCTCTGTGACTGTGGCTaGCCATTGCCCTACCCATGCCACAGGTCGAATTCTTGGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: STRVFSLWKNLCDCG*PLPYPCHRSNSWEA Trigger: TGCTTCCCAAGAATTCGACCTGTGGCATGGGTAGGGCAATGGCCAGCCACAGTCACAGAGATTTTTCCATAATGAGAAGACTCTTGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS GCA 90 bp | CAGAGAATGAGTGTGAATCTTCCTGCTCAGATTAGAGGCTTGGGCTaGTTTGTAAAAATGATACTCTACTTCAGCCCTCCAAATCCACAC | + |
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Preference number: 5 (lower is better) Translates to: QRMSVNLPAQIRGLG*FVKMILYFSPPNPH Trigger: GTGTGGATTTGGAGGGCTGAAGTAGAGTATCATTTTTACAAAGCAGCCCAAGCCTCTAATCTGAGCAGGAAGATTCACACTCATTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CCA 90 bp | ATGATGCGTAAGTCTCCCTTTTTGGCAATGCGTTCAGCAGTTGCCTaGTTTATATGCTTCTTCCTCTTGGCAGAACTCAGTATTCACGTA | + |
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Preference number: 5 (lower is better) Translates to: MMRKSPFLAMRSAVA*FICFFLLAELSIHV Trigger: TACGTGAATACTGAGTTCTGCCAAGAGGAAGAAGCATATAAACCAGGCAACTGCTGAACGCATTGCCAAAAAGGGAGACTTACGCATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CCA 72 bp | CCTTCTAACAGTCAGGCCCCTCTGCTGCAGGTGTGCTaGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PSNSQAPLLQVC*SLLEVHSRPCL Trigger: CAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAGCACACCTGCAGCAGAGGGGCCTGACTGTTAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000662323.1 ENST00000665992.1 ENST00000668920.1 ENST00000669182.1 |
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| CDS CCA 72 bp | TGGCCATTGCCCTACCCATGCCACAGGTCGAATTCTTaGGAAGCAGGCTCTGAGATGGAGCCCAATGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: WPLPYPCHRSNS*EAGSEMEPNVQ Trigger: CTGCACATTGGGCTCCATCTCAGAGCCTGCTTCCCAAGAATTCGACCTGTGGCATGGGTAGGGCAATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS CAA 90 bp | CACAGGTGCACGGTCCCCACAGCAGCCTTATCAGTAGGGCGGCATTaGGCACCATCTTTAGGGATGTGGTCACATCACTCAGGCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: HRCTVPTAALSVGRH*APSLGMWSHHSGSL Trigger: CAAAGAGCCTGAGTGATGTGACCACATCCCTAAAGATGGTGCCAAATGCCGCCCTACTGATAAGGCTGCTGTGGGGACCGTGCACCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS CAA 72 bp | ACGGTCCCCACAGCAGCCTTATCAGTAGGGCGGCATTaGGCACCATCTTTAGGGATGTGGTCACATCACTCA | + |
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Preference number: 6 (lower is better) Translates to: TVPTAALSVGRH*APSLGMWSHHS Trigger: TGAGTGATGTGACCACATCCCTAAAGATGGTGCCAAATGCCGCCCTACTGATAAGGCTGCTGTGGGGACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS TCA 72 bp | CCCATGCCACAGGTCGAATTCTTGGGAAGCAGGCTCTaGGATGGAGCCCAATGTGCAGTATGTTCATTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PMPQVEFLGSRL*DGAQCAVCSLD Trigger: GTCCAATGAACATACTGCACATTGGGCTCCATCTCAGAGCCTGCTTCCCAAGAATTCGACCTGTGGCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS GCA 72 bp | GCTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTaGTTGGGTATCACCAGCAGAGGCTCAGTTAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: AGVCWRSTPDPV*LGITSRGSVRN Trigger: ATTTCTAACTGAGCCTCTGCTGGTGATACCCAAGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662323.1 ENST00000668920.1 ENST00000669182.1 |
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| CDS GCA 72 bp | ATTCTTGGGAAGCAGGCTCTGAGATGGAGCCCAATGTaGAGTATGTTCATTGGACGTGCCCTTGGGCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: ILGKQALRWSPM*SMFIGRALGLV Trigger: TACGAGCCCAAGGGCACGTCCAATGAACATACTGCACATTGGGCTCCATCTCAGAGCCTGCTTCCCAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS GCA 72 bp | TGCAGACTGAAGCTACTTCTATTTGACCATCTTGCCTaGCACCTTGACCCCGTCTCCCTGGTACCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CRLKLLLFDHLA*HLDPVSLVPSR Trigger: TCTGGAAGGTACCAGGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS CAA 90 bp | CCTGCCACCTTGACCCCGTCTCCCTGGTACCTTCCAGATTCTCTCTaGTCATTCCAGCCTAGGGTAAACCTTCAACAAGAGTCTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PATLTPSPWYLPDSL*SFQPRVNLQQESSH Trigger: ATGAGAAGACTCTTGTTGAAGGTTTACCCTAGGCTGGAATGACAAGAGAGAATCTGGAAGGTACCAGGGAGACGGGGTCAAGGTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659322.1 |
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| CDS TCA 72 bp | TTGCCTGCCACCTTGACCCCGTCTCCTTATGTCCACTaGAGTCTTGTAAGTTCTACCATCATAGCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPATLTPSPYVH*SLVSSTIIATS Trigger: GGAGGTGGCTATGATGGTAGAACTTACAAGACTTCAGTGGACATAAGGAGACGGGGTCAAGGTGGCAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000668920.1 |
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| CDS TCA 72 bp | CTGCCTTCTGTGTTGATCTCACTGGGAGCTGCAGACTaGAGCTACTTCTATTTGACCATCTTGCCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: LPSVLISLGAAD*SYFYLTILPAT Trigger: GGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGTGAGATCAACACAGAAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000659670.1 ENST00000662323.1 ENST00000668920.1 ENST00000669182.1 |
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| CDS GCA 72 bp | CCTGGGCCCCATCTTCAGCTTTCTCTGCACTTTCACTaGAGACTACTTTGCAGAGCCTCCTTGCTTCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PGPHLQLSLHFH*RLLCRASLLPY Trigger: ATAAGGAAGCAAGGAGGCTCTGCAAAGTAGTCTGCAGTGAAAGTGCAGAGAAAGCTGAAGATGGGGCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659322.1 ENST00000664372.1 |
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| CDS GCA 72 bp | TGCAGACTGAAGCTACTTCTATTTGACCATCTTGCCTaGCACCTTGACCCCGTCTCCTTGGCATTTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: CRLKLLLFDHLA*HLDPVSLAFQA Trigger: GGCTTGAAATGCCAAGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664372.1 |
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| CDS CCA 72 bp | CCTCTTTGGTTACTGAATACATGCTCCATGACAGCTTaGATTTCCCTGCTCCAGAGACCCCAACAGGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PLWLLNTCSMTA*ISLLQRPQQGL Trigger: TAGCCCCTGTTGGGGTCTCTGGAGCAGGGAAATCCAAGCTGTCATGGAGCATGTATTCAGTAACCAAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS CAA 72 bp | TCCTCTTTGGTTACTGAATACATGCTCCATGACAGCTaGGATTTCCCTGCTCCAGAGACCCCAACAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLVTEYMLHDS*DFPAPETPTGA Trigger: AGCCCCTGTTGGGGTCTCTGGAGCAGGGAAATCCAAGCTGTCATGGAGCATGTATTCAGTAACCAAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS GCA 72 bp | TGCAGACTGAAGCTACTTCTATTTGACCATCTTGCCTaGCACCTTGACCCCGTCTCCTTATGTCCACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CRLKLLLFDHLA*HLDPVSLCPLK Trigger: CTTCAGTGGACATAAGGAGACGGGGTCAAGGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000668920.1 |
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| CDS CCA 72 bp | TCAGTAGGGCGGCATTTGGCACCATCTTTAGGGATGTaGTCACATCACTCAGGCTCTTTGATCTCAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: SVGRHLAPSLGM*SHHSGSLISEP Trigger: AGGTTCTGAGATCAAAGAGCCTGAGTGATGTGACCACATCCCTAAAGATGGTGCCAAATGCCGCCCTACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS CAA 90 bp | TGGGCCCCATCTTCAGCTTTCTCTGCACTTTCACTGCAGACTACTTaGCAGAGCCTCCTTGCTTCCTTATGTCCACTGAAGTCTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: WAPSSAFSALSLQTT*QSLLASLCPLKSCK Trigger: CTTACAAGACTTCAGTGGACATAAGGAAGCAAGGAGGCTCTGCAAAGTAGTCTGCAGTGAAAGTGCAGAGAAAGCTGAAGATGGGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659322.1 ENST00000664372.1 |
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| CDS TCA 72 bp | TTTCCTTCTGTGTTGATCTCACTGGGAGCTGCAGACTaGAGCTACTTCTATTTGACCATCTTGCCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: FPSVLISLGAAD*SYFYLTILPAT Trigger: GGTGGCAGGCAAGATGGTCAAATAGAAGTAGCTTCAGTCTGCAGCTCCCAGTGAGATCAACACAGAAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000662349.1 ENST00000664372.1 ENST00000668160.1 |
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| CDS CAA 72 bp | CAGCCCTCCAAATCCACACAAAGGCTTTCCAACAATTaGTATACACCTAATTCCGGCCCCCACTTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QPSKSTQRLSNN*YTPNSGPHFLF Trigger: GAAGAGGAAGTGGGGGCCGGAATTAGGTGTATACAAATTGTTGGAAAGCCTTTGTGTGGATTTGGAGGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CAA 90 bp | CTTGTAGAATCCTCTTTGGTTACTGAATACATGCTCCATGACAGCTaGGATTTCCCTGCTCCAGAGACCCCAACAGGGGCTACTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVESSLVTEYMLHDS*DFPAPETPTGATIC Trigger: ACAGATAGTAGCCCCTGTTGGGGTCTCTGGAGCAGGGAAATCCAAGCTGTCATGGAGCATGTATTCAGTAACCAAAGAGGATTCTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS TCA 72 bp | CTACTTTGCAGAGCCTCCTTGCTTCCTTATGTCCACTaGAGTCTTGTAAGTTCTACCATCATAGCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLCRASLLPYVH*SLVSSTIIATS Trigger: GGAGGTGGCTATGATGGTAGAACTTACAAGACTTCAGTGGACATAAGGAAGCAAGGAGGCTCTGCAAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659322.1 ENST00000664372.1 |
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| CDS CAA 72 bp | TGCGTAAGTCTCCCTTTTTGGCAATGCGTTCAGCAGTaGCCTGGTTTATATGCTTCTTCCTCTTGGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: CVSLPFWQCVQQ*PGLYASSSWQN Trigger: GTTCTGCCAAGAGGAAGAAGCATATAAACCAGGCAACTGCTGAACGCATTGCCAAAAAGGGAGACTTACGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CCA 72 bp | AAGTCTCCCTTTTTGGCAATGCGTTCAGCAGTTGCCTaGTTTATATGCTTCTTCCTCTTGGCAGAACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KSPFLAMRSAVA*FICFFLLAELS Trigger: ACTGAGTTCTGCCAAGAGGAAGAAGCATATAAACCAGGCAACTGCTGAACGCATTGCCAAAAAGGGAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CAA 72 bp | GCTTCGCTCACTTTTCTGCCATTCTCCAGAATGTCTTaGTGTGATACTTGTACTCATCTGGAGGGTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ASLTFLPFSRMS*CDTCTHLEGLR Trigger: TCTCAGACCCTCCAGATGAGTACAAGTATCACACAAAGACATTCTGGAGAATGGCAGAAAAGTGAGCGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662349.1 |
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| CDS CAA 90 bp | CATTTGGCACCATCTTTAGGGATGTGGTCACATCACTCAGGCTCTTaGATCTCAGAACCTTCATCTTTGAAGAGCAAAGAAGCATTCATG | + |
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Preference number: 6 (lower is better) Translates to: HLAPSLGMWSHHSGS*ISEPSSLKSKEAFM Trigger: CATGAATGCTTCTTTGCTCTTCAAAGATGAAGGTTCTGAGATCAAAGAGCCTGAGTGATGTGACCACATCCCTAAAGATGGTGCCAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS TCA 72 bp | AGATTAACGTATTCTTGGCATTGTTTCCTTCTGTGTTaGTCTCACTGGGAGCTGCAGACTGAAGCTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: RLTYSWHCFLLC*SHWELQTEATS Trigger: AGAAGTAGCTTCAGTCTGCAGCTCCCAGTGAGATCAACACAGAAGGAAACAATGCCAAGAATACGTTAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000662349.1 ENST00000664372.1 ENST00000668160.1 |
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| CDS GCA 72 bp | TTTTTGGCAATGCGTTCAGCAGTTGCCTGGTTTATATaGTTCTTCCTCTTGGCAGAACTCAGTATTCACGTA | + |
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Preference number: 6 (lower is better) Translates to: FLAMRSAVAWFI*FFLLAELSIHV Trigger: TACGTGAATACTGAGTTCTGCCAAGAGGAAGAAGCATATAAACCAGGCAACTGCTGAACGCATTGCCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CCA 72 bp | AAGAACATCAGAACAACTGATGTAAGTCTGCAATGCTaGGAGGTCAATTTCTCCACCATTGTCATTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: KNIRTTDVSLQC*EVNFSTIVILQ Trigger: CTGCAGAATGACAATGGTGGAGAAATTGACCTCCCAGCATTGCAGACTTACATCAGTTGTTCTGATGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CAA 72 bp | CCATCTTTAGGGATGTGGTCACATCACTCAGGCTCTTaGATCTCAGAACCTTCATCTTTGAAGAGCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PSLGMWSHHSGS*ISEPSSLKSKE Trigger: TTCTTTGCTCTTCAAAGATGAAGGTTCTGAGATCAAAGAGCCTGAGTGATGTGACCACATCCCTAAAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS CAA 72 bp | GCTTCGCTCACTTTTCTGCCATTCTCCAGAATGTCTTaGTGTGATACTTGTACTGGAACAGCTTTGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ASLTFLPFSRMS*CDTCTGTALVS Trigger: TGAAACCAAAGCTGTTCCAGTACAAGTATCACACAAAGACATTCTGGAGAATGGCAGAAAAGTGAGCGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662323.1 |
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| CDS CCA 72 bp | CGTATTAAGCACTTACAGTGTGACATCTACACTGCTTaGTCCTTCGCATGCACCCTTTTATCTAATTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: RIKHLQCDIYTA*SFACTLLSNSY Trigger: GTAAGAATTAGATAAAAGGGTGCATGCGAAGGACCAAGCAGTGTAGATGTCACACTGTAAGTGCTTAATACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS GCA 72 bp | AATGCTGGGAGGTCAATTTCTCCACCATTGTCATTCTaGAGGAGTTTATCTGTTCTTGGATCTGATTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: NAGRSISPPLSF*RSLSVLGSDLV Trigger: AACTAAATCAGATCCAAGAACAGATAAACTCCTGCAGAATGACAATGGTGGAGAAATTGACCTCCCAGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000569074.1 ENST00000659322.1 ENST00000659670.1 ENST00000662323.1 ENST00000662349.1 ENST00000664372.1 ENST00000664398.1 ENST00000665992.1 ENST00000667642.1 ENST00000668160.1 ENST00000668920.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS GCA 72 bp | TTACAGTGTGACATCTACACTGCTTGGTCCTTCGCATaGACCCTTTTATCTAATTCTTACAATAGATTGACG | + |
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Preference number: 6 (lower is better) Translates to: LQCDIYTAWSFA*TLLSNSYNRLT Trigger: CGTCAATCTATTGTAAGAATTAGATAAAAGGGTGCATGCGAAGGACCAAGCAGTGTAGATGTCACACTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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| CDS CCA 72 bp | TTGTTTCCTTTGTCTTTGATGCTGGTGACCTTCAGATaGGGTTTTTGTGTGGATGTCCTTTTTGTTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LFPLSLMLVTFR*GFCVDVLFVDV Trigger: AACATCAACAAAAAGGACATCCACACAAAAACCCCATCTGAAGGTCACCAGCATCAAAGACAAAGGAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000662323.1 ENST00000665992.1 ENST00000668920.1 ENST00000669182.1 |
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| CDS GCA 72 bp | TTTGAAGTGTTGTTTTTCTGGCTTCGCTCACTTTTCTaGCATTCTCCAGAATGTCTTTGTGTGATACTTGTA | + |
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Preference number: 6 (lower is better) Translates to: FEVLFFWLRSLF*HSPECLCVILV Trigger: TACAAGTATCACACAAAGACATTCTGGAGAATGGCAGAAAAGTGAGCGAAGCCAGAAAAACAACACTTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000662323.1 ENST00000662349.1 ENST00000667642.1 ENST00000668160.1 ENST00000669182.1 ENST00000669562.1 ENST00000671130.1 |
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| CDS CAA 72 bp | ATGAGCCAGAGAGAAGTACTAAGTGGTTCTTCTATGTaGGATGTGTACCAGAATCATGGAGAAAGTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: MSQREVLSGSSM*DVYQNHGESLL Trigger: TAATAAACTTTCTCCATGATTCTGGTACACATCCAACATAGAAGAACCACTTAGTACTTCTCTCTGGCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569074.1 ENST00000659670.1 ENST00000665992.1 |
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