RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000110619, ENSG00000278191

Ensembl transcript IDs: ENST00000278224.13, ENST00000380525.9, ENST00000397111.9, ENST00000439280.6, ENST00000465207.5, ENST00000465240.1, ENST00000465331.1, ENST00000466442.6, ENST00000470221.6, ENST00000484484.5, ENST00000524825.5, ENST00000526890.5, ENST00000527330.2, ENST00000529772.5, ENST00000531387.5, ENST00000612826.3, ENST00000626648.2, ENST00000631475.1, ENST00000631704.1, ENST00000631707.1, ENST00000632514.1, ENST00000632612.1, ENST00000632736.1, ENST00000632806.1, ENST00000632953.1, ENST00000633036.1, ENST00000633248.1, ENST00000633563.1, ENST00000633606.1, ENST00000633720.1, ENST00000634057.1

Found 1151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTCATTGTCATGGTGGGGGAACCGGAGGTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCTAGGAGGGTGCCTGCCATGGCCGAG +
Preference number: 1 (lower is better)
Translates to: SSLSWWGNRRSNPPP*MSIEAPRRVPAMAE
Trigger: CTCGGCCATGGCAGGCACCCTCCTAGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR TCA 90 bp CCATGGTGTTGCTGGAGTAGTCCAGGGTGTCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACTGCCGTGCTGAGTGCTTTTTCAAGG +
Preference number: 1 (lower is better)
Translates to: PWCCWSSPGCPSTSA*GRPAATAVLSAFSR
Trigger: CCTTGAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCTGGACTACTCCAGCAACACCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR GCA 90 bp ACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCA +
Preference number: 1 (lower is better)
Translates to: TSSKSCAASGLFSRY*SNRWFCRALLMILS
Trigger: TGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR CCA 90 bp AGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTA +
Preference number: 1 (lower is better)
Translates to: SCAASGLFSRYCSNR*FCRALLMILSSISV
Trigger: TACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
3UTR CCA 90 bp GCTGGGACATTGTCACTGAGGCAGACAGCAGCCACTAGTCCACAATaGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCAT +
Preference number: 1 (lower is better)
Translates to: AGTLSLRQTAATSPQ*FKKSVLCPLTGSFH
Trigger: ATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
3UTR GCA 90 bp CAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATT +
Preference number: 1 (lower is better)
Translates to: QTAATSPQWFKKSVL*PLTGSFHSGPSADI
Trigger: AATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
3UTR TCA 90 bp CCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAG +
Preference number: 1 (lower is better)
Translates to: PRVTVNMIGALGHCH*GRQQPLVHNGLKSQ
Trigger: CTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
3UTR-3UTR GCA 90 bp CTGGTTCCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 2 (lower is better)
Translates to: LVPGPPTGNPRELSSSTAAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...GGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGGAACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CCA 90 bp CTGGTTCCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LVPGPPTGNPRELSSSTAPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...GGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGGAACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp CCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCCCAAAGAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: PGPPTGNPRELSSSTAPKSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...CTTTGGGGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCCAGGAGCTACAGCCATaGCCATCCAGTGGTCGGGGG +
Preference number: 2 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALQELQP*PSSGRG
Trigger: CCCCCGACCACTGGATGGTCATGGCTGTAGCTCCTG...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
3UTR-3UTR GCA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: AASGLFSRYCSNRWFCRAVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR GCA 90 bp CTGTGCCAGCTCATTGTCATGGTGGGGGAACCGGAGGTCGAACCCACCTCCGTGGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: LCQLIVMVGEPEVEPTSVVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...CACGGAGGTGGGTTCGACCTCCGGTTCCCCCACCATGACAATGAGCTGGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR GCA 90 bp ACGACCCTTTCCCCAAGGGCACGGCCAGGACGGTTCTCCGGGCTTAGAGGCCTTTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 2 (lower is better)
Translates to: TTLSPRARPGRFSGLRGLSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...AAGGCCTCTAAGCCCGGAGAACCGTCCTGGCCGTGCCCTTGGGGAAAGGGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp CTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCCAGGAGCTACAGCCATaGCCATCCAGTGGTCGGGGG +
Preference number: 2 (lower is better)
Translates to: LPILLEQVVLPGPLDDLVQELQP*PSSGRG
Trigger: CCCCCGACCACTGGATGGTCATGGCTGTAGCTCCTG...GACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
3UTR-3UTR CCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LQELCRFRPLLPILLEQVPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR CAA 90 bp CAGGACGGTTCTCCGGGCTTAGAGGCCTTCCATAAGGCAAAGTCGTaGGGAGAGCGCTTCTCACTCAGGCGGTCTGCAGAGATGCTCAGG +
Preference number: 2 (lower is better)
Translates to: QDGSPGLEAFHKAKS*GERFSLRRSAEMLR
Trigger: CCTGAGCATCTCTGCAGACCGCCTGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTATGGAAGGCCTCTAAGCCCGGAGAACCGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR GCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCCCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 2 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 2 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR GCA 90 bp GTTTTCAAAGTAGGCCTCCGACTGTGCCAGCTCATTGTCATGGTGGGGGAACCGGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 2 (lower is better)
Translates to: VFKVGLRLCQLIVMVGEPAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...CGGTTCCCCCACCATGACAATGAGCTGGCACAGTCGGAGGCCTACTTTGAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR GCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCCTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 2 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCLTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp AAGATCTTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: KIFSIWVRYRAMFSSRAWGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...CCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAAGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR GCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CCA 90 bp TTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 2 (lower is better)
Translates to: FRPLLPILLEQVVLPGPLKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...AAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 2 (lower is better)
Translates to: LFSRYCSNRWFCRALLMICVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR GCA 90 bp AAGATCTTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: KIFSIWVRYRAMFSSRAWKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...CCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAAGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CCA 90 bp AAGATCTTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 2 (lower is better)
Translates to: KIFSIWVRYRAMFSSRAWKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...CCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR GCA 90 bp CAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTTCTTAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: QLCCFLFLFPPGRLLFLLKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...AAGAAGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CCA 90 bp CTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 2 (lower is better)
Translates to: LEQVVLPGPLDDLVINIRKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...ACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CCA 90 bp AATCTCAGGGACTTTTTGCTCTCGGGCAATCTTCCGCACTCCTTCTCGGAATTCGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 2 (lower is better)
Translates to: NLRDFLLSGNLPHSFSEFASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...GAATTCCGAGAAGGAGTGCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFTFFPS*GMNTSF
Trigger: AAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR TCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGACCCCACTTCTCAAACTaGCCAGTGATGTCAACAGGA +
Preference number: 2 (lower is better)
Translates to: HSGPSADIPCRASPEPRRPHFSN*PVMSTG
Trigger: TCCTGTTGACATCACTGGTCAGTTTGAGAAGTGGGG...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR GCA 90 bp GGCAGCTTGGAGAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: GSLEKMELSVTSQPSVESLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...GGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTCTCCAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR GCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGAATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR GCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGATGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 2 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CCA 90 bp CTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LLRKIYYQCLRANDDTNLPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...TAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
3UTR-3UTR CCA 90 bp TGTGTGGGCAGACCATTTTCATCAAACTTGGAGTATTTGTCGGTTTCTGACAAGACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: CVGRPFSSNLEYLSVSDKTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...CTTGTCAGAAACCGACAAATACTCCAAGTTTGATGAAAATGGTCTGCCCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR TCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 2 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
3UTR-3UTR TCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACACTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 2 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
3UTR-3UTR CCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGATTTTATCGGGATCCGTaGTCTCATTTAATTTTACTG +
Preference number: 2 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRFYRDP*SHLILL
Trigger: CAGTAAAATTAAATGAGACCACGGATCCCGATAAAA...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR TCA 72 bp TCATGGTGGGGGAACCGGAGGTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCTAGGAGGGTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: SWWGNRRSNPPP*MSIEAPRRVPA
Trigger: GGCAGGCACCCTCCTAGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGACCTCCGGTTCCCCCACCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR CCA 72 bp TGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: WVRYRAMFSSRA*LGLFLTAFRAA
Trigger: GGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CAA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCATGCGTCATAGACGGTaGGCCCACAGCAATACCACG +
Preference number: 3 (lower is better)
Translates to: AASGLFSRYCSNRWFCRAMRHRR*AHSNTT
Trigger: CGTGGTATTGCTGTGGGCCAACCGTCTATGACGCAT...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CAA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGAGGAGCGCTGGGACATaGTCACTGAGGCAGACAGCA +
Preference number: 3 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMRSAGT*SLRQTA
Trigger: TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCT...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR GCA 72 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATG +
Preference number: 3 (lower is better)
Translates to: KSCAASGLFSRY*SNRWFCRALLM
Trigger: CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CAA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCACCTCCACACAGCTGTaGACTTCCTCTCCCGTGAGT +
Preference number: 3 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCTSTQL*TSSPVS
Trigger: ACTCACGGGAGAGGAAGTCAACAGCTGTGTGGAGGT...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CAA 90 bp GAAGCGCTGACTCCATGGTGTTGCTGGAGTAGTCCAGGGTGTCCTTCCACGAGTAGGAGCGCTGGGACATaGTCACTGAGGCAGACAGCA +
Preference number: 3 (lower is better)
Translates to: EALTPWCCWSSPGCPSTSRSAGT*SLRQTA
Trigger: TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCT...ACTCGTGGAAGGACACCCTGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CAA 90 bp TTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGTTGGGCATGCGTCATAGACGGTaGGCCCACAGCAATACCACG +
Preference number: 3 (lower is better)
Translates to: FSIWVRYRAMFSSRAWLGMRHRR*AHSNTT
Trigger: CGTGGTATTGCTGTGGGCCAACCGTCTATGACGCAT...GCCCAACCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR TCA 72 bp CTGCAATGGTCAGGTGGCCTGTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAAAGTAGGCCTCCGACT +
Preference number: 3 (lower is better)
Translates to: LQWSGGLCAGST*PSSRFQSRPPT
Trigger: AGTCGGAGGCCTACTTTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACACAGGCCACCTGACCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR CCA 72 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCA +
Preference number: 3 (lower is better)
Translates to: ASGLFSRYCSNR*FCRALLMILSS
Trigger: TGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
3UTR GCA 72 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATCTTGTCATCAATATCC +
Preference number: 3 (lower is better)
Translates to: GLFSRYCSNRWF*RALLMILSSIS
Trigger: GGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CAA 90 bp GAGAGCGCTTCTCACTCAGGCGGTCTGCAGAGATGCTCAGGTCACCTTCCCCTTCACCTTTTTCCCATCTaGAGGTATGAACACTTCCTT +
Preference number: 3 (lower is better)
Translates to: ESASHSGGLQRCSGHLPLHLFPI*RYEHFL
Trigger: AAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGTG...AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAGAAGCGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CAA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGCCCTCTTGATGATCTaGTCATCAATATCCGTAATG +
Preference number: 3 (lower is better)
Translates to: LQELCRFRPLLPILLEQVALLMI*SSISVM
Trigger: CATTACGGATATTGATGACAAGATCATCAAGAGGGC...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CAA 90 bp CAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTTCTTTTCTGCCGGGCCCTCTaGATGATCTTGTCATCAATA +
Preference number: 3 (lower is better)
Translates to: QLCCFLFLFPPGRLLFLLFCRAL*MILSSI
Trigger: TATTGATGACAAGATCATCAAGAGGGCCCGGCAGAA...AAGAAGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR-3UTR CAA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGAATGCGTCATAGACGGTaGGCCCACAGCAATACCACG +
Preference number: 3 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRMRHRR*AHSNTT
Trigger: CGTGGTATTGCTGTGGGCCAACCGTCTATGACGCAT...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR CCA 72 bp CATTCAAGAACTTCTCATATTGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCAGGGTGTCCTTCCACG +
Preference number: 3 (lower is better)
Translates to: HSRTSHIEALTP*CCWSSPGCPST
Trigger: CGTGGAAGGACACCCTGGACTACTCCAGCAACACCATGGAGTCAGCGCTTCAATATGAGAAGTTCTTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR TCA 72 bp ACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTAGTCCACAATGGTTTA +
Preference number: 3 (lower is better)
Translates to: TVNMIGALGHCH*GRQQPLVHNGL
Trigger: TAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
3UTR-3UTR CAA 90 bp CTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTCACCTTTTTCCCATCTaGAGGTATGAACACTTCCTT +
Preference number: 3 (lower is better)
Translates to: LEQVVLPGPLDDLVINIRHLFPI*RYEHFL
Trigger: AAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGTG...ACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR-3UTR CAA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAAGGAGCGCTGGGACATaGTCACTGAGGCAGACAGCA +
Preference number: 3 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTRSAGT*SLRQTA
Trigger: TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCT...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
3UTR TCA 72 bp GGCCCACAGCAATACCACGTCACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTTGTTAGGAATGAAGGA +
Preference number: 3 (lower is better)
Translates to: GPQQYHVTFFPS*GMNTSFVRNEG
Trigger: TCCTTCATTCCTAACAAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGTGACGTGGTATTGCTGTGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
3UTR TCA 72 bp GAAAAACTCATTCAAGAACTTCTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGAGTAGTCCAGGGTGTC +
Preference number: 3 (lower is better)
Translates to: EKLIQELLILKR*LHGVAGVVQGV
Trigger: GACACCCTGGACTACTCCAGCAACACCATGGAGTCAGCGCTTCAATATGAGAAGTTCTTGAATGAGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
3UTR CCA 72 bp CCATGTCATGTGTGGGCAGACCATTTTCATCAAACTTaGAGTATTTGTCGGTTTCTGACAAGAACATCTCAC +
Preference number: 3 (lower is better)
Translates to: PCHVWADHFHQT*SICRFLTRTSH
Trigger: GTGAGATGTTCTTGTCAGAAACCGACAAATACTCCAAGTTTGATGAAAATGGTCTGCCCACACATGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR CCA 90 bp GGTGGGGGAACCGGAGGTCGAACCCACCTCCGTGAATGTCCATCGAAGCCCCTAGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GGGTGGRTHLRECPSKPLAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...TAGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGACCTCCGGTTCCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR CCA 90 bp CTGGTTCCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCGCGTCCACGTCTGCCTaGGACAGTGAGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVPGPPTGNPRELSSSTAASTSA*DSEYPW
Trigger: CCAGGGGTACTCACTGTCCCAGGCAGACGTGGACGC...GGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGGAACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTCGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LQASSPDTARTGGSAGPSRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...AGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CCAACAGCCAGCTACTCGTCAGGAGCTACAGCCATGACCATCCAGTGGTCGGGGCGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: PTASYSSGATAMTIQWSGRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...CCCCGACCACTGGATGGTCATGGCTGTAGCTCCTGACGAGTAGCTGGCTGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR GCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: AASGLFSRYCSNRWFCRAKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGCCAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTGCCACGTGGAAGAGCTaGGGGTCAGCGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: WPALLLLVPVSSGPPPLSATWKS*GSAGGA
Trigger: GGCCCCGCCCGCTGACCCCCAGCTCTTCCACGTGGC...AGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CTGGTTCCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCGTCTGCCTGGGACAGTaGGTACCCCTGGACATAGCT +
Preference number: 4 (lower is better)
Translates to: LVPGPPTGNPRELSSSTAVCLGQ*VPLDIA
Trigger: AGCTATGTCCAGGGGTACTCACTGTCCCAGGCAGAC...GGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGGAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LQASSPDTARTGGSAGPSAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...AGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LPILLEQVVLPGPLDDLVGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...GACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCGTTCAGGGCTTGTaGCCTGGCTGCCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: AASGLFSRYCSNRWFCRALVQGL*PGCLVT
Trigger: AGTGACGAGGCAGCCAGGGCACAAGCCCTGAACGAG...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCGDHWG*TRRPLL
Trigger: AAGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LPILLEQVVLPGPLDDLVAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...GACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCCCAAAGGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: PGPPTGNPRELSSSTAPKVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...CTTTGGGGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CCAACAGCCAGCTACTCGTCAGGAGCTACAGCCATGACCATCCAGTGGTCGGGGCAGGAGCTACAGCCATaGCCATCCAGTGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PTASYSSGATAMTIQWSGQELQP*PSSGRG
Trigger: CCCCCGACCACTGGATGGTCATGGCTGTAGCTCCTG...CCCCGACCACTGGATGGTCATGGCTGTAGCTCCTGACGAGTAGCTGGCTGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR GCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCCGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCCGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMIRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCCCAAAGATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PGPPTGNPRELSSSTAPKILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...CTTTGGGGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp ACGACCCTTTCCCCAAGGGCACGGCCAGGACGGTTCTCCGGGCTTAGAGGCCTTGTCAGGTGGCCTGTGTaGAGGAAGTACCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: TTLSPRARPGRFSGLRGLVRWPV*RKYLTQ
Trigger: CTGGGTCAGGTACTTCCTGCACACAGGCCACCTGAC...AAGGCCTCTAAGCCCGGAGAACCGTCCTGGCCGTGCCCTTGGGGAAAGGGTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCGGCTTGTGCCCTGGCTaGCTCGTCACTAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLQASSPDTARTGGSAGPGLCPG*LVTNAQ
Trigger: CTGAGCATTAGTGACGAGGCAGCCAGGGCACAAGCC...GGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATAACGCCGGCCTTTGCTTaGTTGGAGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGLNILQELCRFRPLLPITPAFA*LEPAGL
Trigger: CAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCGGCGT...TATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GTTTTCAAAGTAGGCCTCCGACTGTGCCAGCTCATTGTCATGGTGGGGGAACCGGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: VFKVGLRLCQLIVMVGEPAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...CGGTTCCCCCACCATGACAATGAGCTGGCACAGTCGGAGGCCTACTTTGAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGCCACGTGGAAGAGCTaGGGGTCAGCGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAATWKS*GSAGGA
Trigger: GGCCCCGCCCGCTGACCCCCAGCTCTTCCACGTGGC...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCGGGCCGAGAGCTGCCTaGACGCGTCCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSGPRAA*TRPRLP
Trigger: AGGCAGACGTGGACGCGTTCAGGCAGCTCTCGGCCC...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATATCCCGGACCCGCAGCTaGGGCTACAGACACTTCCTA +
Preference number: 4 (lower is better)
Translates to: GGLNILQELCRFRPLLPISRTRS*GYRHFL
Trigger: TAGGAAGTGTCTGTAGCCGCAGCTGCGGGTCCGGGA...TATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGACGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278224.13
ENST00000632612.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTACGCGTGCTGAGGTaGTCGTTCAGGGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GGLNILQELCRFRPLLPILRVLR*SFRACA
Trigger: GGCACAAGCCCTGAACGAGCACCTCAGCACGCGTAG...TATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATATGCTTGCTTGGAGCCTaGAGGGCTGGCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGLNILQELCRFRPLLPICLLGA*RAGLCH
Trigger: GTGGCAAAGGCCAGCCCTGCAGGCTCCAAGCAAGCA...TATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCTGCTTGCTTGGAGCCTaGAGGGCTGGCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCCLLGA*RAGLCH
Trigger: GTGGCAAAGGCCAGCCCTGCAGGCTCCAAGCAAGCA...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFGDHWG*TRRPLL
Trigger: AAGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KSQSCAPSLEASILGHLQGDHWG*TRRPLP
Trigger: AGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...CTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ACGACCCTTTCCCCAAGGGCACGGCCAGGACGGTTCTCCGGGCTTAGAGGCCTTAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: TTLSPRARPGRFSGLRGLSSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...AAGGCCTCTAAGCCCGGAGAACCGTCCTGGCCGTGCCCTTGGGGAAAGGGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LQASSPDTARTGGSAGPSPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...AGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GAGAGCGCTTCTCACTCAGGCGGTCTGCAGAGATGCTCAGGTCACCTTCCCCTTCGGCCTTTGCTTGCTTaGAGCCTGCAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ESASHSGGLQRCSGHLPLRPLLA*SLQGWP
Trigger: AGGCCAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCG...AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAGAAGCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGGACCCCACGAGAGCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LQELCRFRPLLPILLEQVGPHES*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGCTCTCGTGGGGTCC...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR CCA 90 bp TTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGGACCCCACGAGAGCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: FRPLLPILLEQVVLPGPLGPHES*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGCTCTCGTGGGGTCC...AAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
3UTR CAA 72 bp GTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGTaGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: VRYRAMFSSRAW*GLFLTAFRAAI
Trigger: TATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LQELCRFRPLLPILLEQVGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCCGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: LPILLEQVVLPGPLDDLVRPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...GACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCCGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMIRPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTTGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AGGGTGTCCTTCCACGAGTGCATGAGGAAGGCCAGCCGCAACTGCCGTGCTGAGTGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RVSFHECMRKASRNCRAECKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...CTCAGCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LQASSPDTARTGGSAGPSVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...AGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AGGGTGTCCTTCCACGAGTGCATGAGGAAGGCCAGCCGCAACTGCCGTGCTGAGTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: RVSFHECMRKASRNCRAESNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...CTCAGCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLQASSPDTARTGGSAGPLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...GGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCCCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTGGTTCCAGGCCCTCCGACCGGGAATCCCAGGGAGCTGTCCTCTTCTACGGCCAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVPGPPTGNPRELSSSTAKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...GGCCGTAGAAGAGGACAGCTCCCTGGGATTCCCGGTCGGAGGGCCTGGAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGGCGGGGCCGAGAGCTaGCTGAACGCGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLGGAES*LNASTS
Trigger: AGACGTGGACGCGTTCAGGCAGCTCTCGGCCCCGCC...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCGGAATCTGCCATGGCTaGGAATCCCGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFGICHG*ESRTRS
Trigger: GCTGCGGGTCCGGGATTCCCAGCCATGGCAGATTCC...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ACGACCCTTTCCCCAAGGGCACGGCCAGGACGGTTCTCCGGGCTTAGAGGCCTTACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TTLSPRARPGRFSGLRGLTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...AAGGCCTCTAAGCCCGGAGAACCGTCCTGGCCGTGCCCTTGGGGAAAGGGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGCCACGTGGAAGAGCTaGGGGTCAGCGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRATWKS*GSAGGA
Trigger: GGCCCCGCCCGCTGACCCCCAGCTCTTCCACGTGGC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TGGCCAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WPALLLLVPVSSGPPPLSGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...AGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCACTTGGCCGCTTAATTaGGCTGGCCTTGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: AASGLFSRYCSNRWFCRATWPLN*AGLAKT
Trigger: TGTTTTGGCAAGGCCAGCTCAATTAAGCGGCCAAGT...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTARRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000278224.13
ENST00000632612.1
CDS-3UTR GCA 90 bp GAGCCTGGTTGGGCCTCTTCCTCACGGCTTTCCGGGCTGCCATATAGAGGTTGCATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPGWASSSRLSGLPYRGCILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...GCAACCTCTATATGGCAGCCCGGAAAGCCGTGAGGAAGAGGCCCAACCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGGGGGAACCGGAGGTCGAACCCACCTCCGTGAATGTCCATCGAAGCCCCTACTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GGGTGGRTHLRECPSKPLLTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...TAGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGACCTCCGGTTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp TGGCCAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTCTCGTTCAGGGCTTGTaGCCTGGCTGCCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: WPALLLLVPVSSGPPPLSLVQGL*PGCLVT
Trigger: AGTGACGAGGCAGCCAGGGCACAAGCCCTGAACGAG...AGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGGCGGGGCCGAGAGCTaGCTGAACGCGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAGGAES*LNASTS
Trigger: AGACGTGGACGCGTTCAGGCAGCTCTCGGCCCCGCC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGCCAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WPALLLLVPVSSGPPPLSASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...AGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTTTTTGCAGCCTGCAATaGTCAGGTGGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPFCSLQ*SGGLCA
Trigger: TGCACACAGGCCACCTGACCATTGCAGGCTGCAAAA...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp AAAGTCGTTGGGAGAGCGCTTCTCACTCAGGCGGTCTGCAGAGATGCTCAGGTCCCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: KVVGRALLTQAVCRDAQVPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...GACCTGAGCATCTCTGCAGACCGCCTGAGTGAGAAGCGCTCTCCCAACGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTCCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCAGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: SRYCSNRWFCRALLMILSALLCA*TTEPRG
Trigger: TCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGC...TGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTACTTGGCCGCTTAATTaGGCTGGCCTTGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: RFRPLLPILLEQVVLPGPTWPLN*AGLAKT
Trigger: TGTTTTGGCAAGGCCAGCTCAATTAAGCGGCCAAGT...AGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAARPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQRPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp CTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLEQVVLPGPLDDLVINIAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...GATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGTGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LQELCRFRPLLPILLEQVCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMIVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: LQELCRFRPLLPILLEQVSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: FRPLLPILLEQVVLPGPLCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...AAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGGGGGAACCGGAGGTCGAACCCACCTCCGTGAATGTCCATCGAAGCCCCTAATCTCAGGGACTTTTTaGTCTCGGGCAATCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GGGTGGRTHLRECPSKPLISGTF*SRAIFR
Trigger: GCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGAT...TAGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGACCTCCGGTTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCACGCCGGCCTTTGCTTaGTTGGAGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAATPAFA*LEPAGL
Trigger: CAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCGGCGT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRGDHWG*TRRPLP
Trigger: AGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR CCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATATGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: GGLNILQELCRFRPLLPICVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...TATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCCCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGATTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: EHPPRAVPLQASSPDTARFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...TCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCGGCCTTTGCTTGCTTaGAGCCTGCAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQRPLLA*SLQGWP
Trigger: AGGCCAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
3UTR CAA 72 bp TCTCCGGGCTTAGAGGCCTTCCATAAGGCAAAGTCGTaGGGAGAGCGCTTCTCACTCAGGCGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPGLEAFHKAKS*GERFSLRRSAE
Trigger: CTCTGCAGACCGCCTGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTATGGAAGGCCTCTAAGCCCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMILGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGGGCCGAGAGCTGCCTaGACGCGTCCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLGPRAA*TRPRLP
Trigger: AGGCAGACGTGGACGCGTTCAGGCAGCTCTCGGCCC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGTGTGCGGAAAGGCCCTaGGGTAGGCTCCATCTACCC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQCAERP*GRLHLP
Trigger: GGGTAGATGGAGCCTACCTCAGGGCCTTTCCGCACA...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTTCCCGGACCCGCAGCTaGGGCTACAGACACTTCCTA +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLSRTRS*GYRHFL
Trigger: TAGGAAGTGTCTGTAGCCGCAGCTGCGGGTCCGGGA...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000531387.5
ENST00000632612.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGTCCCGGACCCGCAGCTaGGGCTACAGACACTTCCTA +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQSRTRS*GYRHFL
Trigger: TAGGAAGTGTCTGTAGCCGCAGCTGCGGGTCCGGGA...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCCGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: CSNRWFCRALLMILSSISRPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...GGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000626648.2
ENST00000632806.1
CDS-3UTR GCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278224.13
ENST00000632612.1
CDS-3UTR GCA 90 bp AACAGGAATTTAGAAATCAGGGCCCTTAGCGCAAGAGAGCCAGCACAAGACAATGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NRNLEIRALSAREPAQDNGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...ATTGTCTTGTGCTGGCTCTCTTGCGCTAAGGGCCCTGATTTCTAAATTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp ACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: TSSKSCAASGLFSRYCSNCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...GTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCCCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPILLEQVVLPGPLDDLVPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...GACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGACTCACTCAGGCGGTCTaGAGAGATGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRLTQAV*RDAQVT
Trigger: GGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAG...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: CSNRWFCRALLMILSSISKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...GGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCCAGGGTGTCCTTCCACGAGTGCATGAGGAAGGCCAGCCGCAACTGCCGTGCGTGACTTTGACATTTTaGAGCCTGCAATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VQGVLPRVHEEGQPQLPCVTLTF*SLQWSG
Trigger: ACCTGACCATTGCAGGCTGCAAAATGTCAAAGTCAC...GCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGCTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LQELCRFRPLLPILLEQVLTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAGGCTTGTGCCCTGGCTaGCTCGTCACTAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRGLCPG*LVTNAQ
Trigger: CTGAGCATTAGTGACGAGGCAGCCAGGGCACAAGCC...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCTCGTTCAGGGCTTGTaGCCTGGCTGCCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRLVQGL*PGCLVT
Trigger: AGTGACGAGGCAGCCAGGGCACAAGCCCTGAACGAG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCTACGCGTGCTGAGGTaGTCGTTCAGGGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAALRVLR*SFRACA
Trigger: GGCACAAGCCCTGAACGAGCACCTCAGCACGCGTAG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCAAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: SRYCSNRWFCRALLMILSRSASM*LNHRAT
Trigger: CGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT...TGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATACGCCGGCCTTTGCTTaGTTGGAGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHTPAFA*LEPAGL
Trigger: CAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCGGCGT...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGGAATCTGCCATGGCTaGGAATCCCGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRGICHG*ESRTRS
Trigger: GCTGCGGGTCCGGGATTCCCAGCCATGGCAGATTCC...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TSSKSCAASGLFSRYCSNASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...GTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AGGGTGTCCTTCCACGAGTGCATGAGGAAGGCCAGCCGCAACTGCCGTGCTGAGAAGATCTTCAGCATATaGGTGAGGTACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: RVSFHECMRKASRNCRAEKIFSI*VRYRAM
Trigger: CATCGCCCTGTACCTCACCCATATGCTGAAGATCTT...CTCAGCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATGGGGAATCTTCATCTTaGCCAGCTTTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDGESSS*PALLLL
Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATTCCCC...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTGTAGTTCAACCCAATaGCGACCCGCGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAACSSTQ*RPALRS
Trigger: GCTCCGGAGCGCGGGTCGCCATTGGGTTGAACTACA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397111.9
ENST00000633248.1
CDS-3UTR TCA 90 bp CCAACAGCCAGCTACTCGTCAGGAGCTACAGCCATGACCATCCAGTGGTCGGGGTCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTASYSSGATAMTIQWSGSHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...CCCCGACCACTGGATGGTCATGGCTGTAGCTCCTGACGAGTAGCTGGCTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAASNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCACCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCCGCATCTCTTCCATaGCGGTGCGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPASLP*RCGCQH
Trigger: ATGTTGACACCCGCACCGTCATGGAAGAGATGCGGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTCATAGCTACGCGTGCTaGGGTGCTCGTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLHSYAC*GARSGL
Trigger: AAGCCCTGAACGAGCACCTCAGCACGCGTAGCTATG...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGTCTGCCTGGGACAGTaGGTACCCCTGGACATAGCT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQVCLGQ*VPLDIA
Trigger: AGCTATGTCCAGGGGTACTCACTGTCCCAGGCAGAC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGTCTGCCTGGGACAGTaGGTACCCCTGGACATAGCT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAVCLGQ*VPLDIA
Trigger: AGCTATGTCCAGGGGTACTCACTGTCCCAGGCAGAC...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp CCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCACTCAAGTTCAATGTTaGCTTGGCCGCTTAATTGAG +
Preference number: 4 (lower is better)
Translates to: PLQASSPDTARTGGSAGPTQVQC*LGRLIE
Trigger: CTCAATTAAGCGGCCAAGTCAACATTGAACTTGAGT...GGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR TCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATTGTGCGGAAAGGCCCTaGGGTAGGCTCCATCTACCC +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHCAERP*GRLHLP
Trigger: GGGTAGATGGAGCCTACCTCAGGGCCTTTCCGCACA...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR GCA 90 bp TCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRYCSNRWFCRALLMILSCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...TGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTTCTTGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QLCCFLFLFPPGRLLFLLVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...AAGAAGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMILFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: KSQSCAPSLEASILGHLQCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...CTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAGATCTTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGCTCACTCAGGCGGTCTaGAGAGATGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: KIFSIWVRYRAMFSSRAWLTQAV*RDAQVT
Trigger: GGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAG...CCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGTCAGGTGGCCTGTGTaGAGGAAGTACCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQVRWPV*RKYLTQ
Trigger: CTGGGTCAGGTACTTCCTGCACACAGGCCACCTGAC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATGTGACTTTGACATTTTaGAGCCTGCAATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDVTLTF*SLQWSG
Trigger: ACCTGACCATTGCAGGCTGCAAAATGTCAAAGTCAC...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTTTCAAAGTAGGCCTCCGACTGTGCCAGCTCATTGTCATGGTGGGGGAACCGCACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: VFKVGLRLCQLIVMVGEPHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...CGGTTCCCCCACCATGACAATGAGCTGGCACAGTCGGAGGCCTACTTTGAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGATCTCAGGGACTTTTTaGTCTCGGGCAATCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LQELCRFRPLLPILLEQVISGTF*SRAIFR
Trigger: GCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGAT...CACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGGCTTGTGCCCTGGCTaGCTCGTCACTAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRGLCPG*LVTNAQ
Trigger: CTGAGCATTAGTGACGAGGCAGCCAGGGCACAAGCC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGGCTTGTGCCCTGGCTaGCTCGTCACTAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQGLCPG*LVTNAQ
Trigger: CTGAGCATTAGTGACGAGGCAGCCAGGGCACAAGCC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp AAGATCTTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: KIFSIWVRYRAMFSSRAWRSASM*LNHRAT
Trigger: CGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT...CCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCACGAAAAGCCCATTATaGCCCTCAACTCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AASGLFSRYCSNRWFCRATKSPL*PSTQVQ
Trigger: TTGAACTTGAGTTGAGGGGCATAATGGGCTTTTCGT...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCGCACACGCCGGCCTTTaGCTGATGAGCAGCCGACCA +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGAHAGL*LMSSRP
Trigger: TGGTCGGCTGCTCATCAGGCAAAGGCCGGCGTGTGC...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR CCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATGGAATCTGCCATGGCTaGGAATCCCGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINGICHG*ESRTRS
Trigger: GCTGCGGGTCCGGGATTCCCAGCCATGGCAGATTCC...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: TSSKSCAASGLFSRYCSNKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...GTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SRYCSNRWFCRALLMILSSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...TGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGAGTAGACAGACCCATTaGAGACATAGCCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: GLFSRYCSNRWFCRALLMSRQTH*RHSRNR
Trigger: ACGGTTACGGCTATGTCTCCAATGGGTCTGTCTACT...CATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGACCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCCCTCCATGTCATGTGTaGGCAGACCATTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALPPCHV*ADHFHQ
Trigger: TTGATGAAAATGGTCTGCCCACACATGACATGGAGG...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCCTTCCTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFLPCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGGAAG...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR TCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTASCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGATCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCATCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTASNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGTTGGGCTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FSIWVRYRAMFSSRAWLGCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...GCCCAACCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCCCGCATCTCTTCCATaGCGGTGCGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHPASLP*RCGCQH
Trigger: ATGTTGACACCCGCACCGTCATGGAAGAGATGCGGG...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGCCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACATAGCTACGCGTGCTaGGGTGCTCGTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAHSYAC*GARSGL
Trigger: AAGCCCTGAACGAGCACCTCAGCACGCGTAGCTATG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp AATCTCAGGGACTTTTTGCTCTCGGGCAATCTTCCGCACTCCTTCTCGGAATTCGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: NLRDFLLSGNLPHSFSEFALLCA*TTEPRG
Trigger: TCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGC...GAATTCCGAGAAGGAGTGCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAACACTTCCTAGAATCTaGTGCAACCGCCGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTATLPRI*CNRRPG
Trigger: TCCGGGGCGGCGGTTGCATCAGATTCTAGGAAGTGT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397111.9
ENST00000633248.1
CDS-3UTR TCA 90 bp GCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AASGLFSRYCSNRWFCRATFFPS*GMNTSF
Trigger: AAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...GGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATCAGGAGCTACAGCCATaGCCATCCAGTGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNQELQP*PSSGRG
Trigger: CCCCCGACCACTGGATGGTCATGGCTGTAGCTCCTG...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR GCA 90 bp TCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTATCCCGGACCCGCAGCTaGGGCTACAGACACTTCCTA +
Preference number: 4 (lower is better)
Translates to: SNRWFCRALLMILSSISVSRTRS*GYRHFL
Trigger: TAGGAAGTGTCTGTAGCCGCAGCTGCGGGTCCGGGA...TACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTTGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KSQSCAPSLEASILGHLQLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...CTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTCCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTCACTCAGGCGGTCTaGAGAGATGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHLTQAV*RDAQVT
Trigger: GGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAG...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLEAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLVGLRL*QLIVMV
Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRVGLRL*QLIVMV
Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTARSASM*LNHRAT
Trigger: CGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCCAGGGTGTCCTTCCACGAGTGCATGAGGAAGGCCAGCCGCAACTGCCGTGCGACGATCACAAGAAATaGAAGAAACACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VQGVLPRVHEEGQPQLPCDDHKK*KKHLFL
Trigger: CAGGAACAAGTGTTTCTTGCATTTCTTGTGATCGTC...GCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAAAAGGAAAAGCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRKGKAC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGCTTTTCCTTT...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR CCA 90 bp AAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: KSQSCAPSLEASILGHLQCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...CTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LEQVVLPGPLDDLVINIRYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...ACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGATACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSNRWFCRALLMILSSISYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...GGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTTCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAASQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRSSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLSSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAASSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GTTTTCAAAGTAGGCCTCCGACTGTGCCAGCTCATTGTCATGGTGGGGGAACCGGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: VFKVGLRLCQLIVMVGEPEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...CGGTTCCCCCACCATGACAATGAGCTGGCACAGTCGGAGGCCTACTTTGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAACCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLEPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCGCGTCCACGTCTGCCTaGGACAGTGAGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLASTSA*DSEYPW
Trigger: CCAGGGGTACTCACTGTCCCAGGCAGACGTGGACGC...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCCTTCCTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSLPCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGGAAG...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR TCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMISHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR TCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGCAGCTTGGAGAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: GSLEKMELSVTSQPSVESPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...GGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTCTCCAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCCTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSLILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCACTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCAACACTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMINTCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGTGTT...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GTCCAGGGTGTCCTTCCACGAGTGCATGAGGAAGGCCAGCCGCAACTGCCGTGCTTAGGAATGAAGGAATaGCGATCACAAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: VQGVLPRVHEEGQPQLPCLGMKE*RSQEMQ
Trigger: TTGCATTTCTTGTGATCGTCATTCCTTCATTCCTAA...GCACGGCAGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACACCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGACGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRRPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCATGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTACKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATTGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCATCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTASNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: LLEQVVLPGPLDDLVINISNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...GATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGACCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHVGLRL*QLIVMV
Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGTCAGGTGGCCTGTGTaGAGGAAGTACCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRVRWPV*RKYLTQ
Trigger: CTGGGTCAGGTACTTCCTGCACACAGGCCACCTGAC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQLTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCTACGCGTGCTGAGGTaGTCGTTCAGGGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASLRVLR*SFRACA
Trigger: GGCACAAGCCCTGAACGAGCACCTCAGCACGCGTAG...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp GGGCGGCCTGAACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATGACGATCACAAGAAATaGAAGAAACACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GRPEHPPRAVPLQASSPDDDHKK*KKHLFL
Trigger: CAGGAACAAGTGTTTCTTGCATTTCTTGTGATCGTC...ATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGTTCAGGCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTAAAGGAAAAGCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLKGKAC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGCTTTTCCTTT...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR GCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGATGCAAAGGAAAAGCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRCKGKA*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGCTTTTCCTTTGCA...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633563.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGGAATCTGCCATGGCTaGGAATCCCGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSGICHG*ESRTRS
Trigger: GCTGCGGGTCCGGGATTCCCAGCCATGGCAGATTCC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPSSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTASSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LEQVVLPGPLDDLVINIRSSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...ACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAATPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLREALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCAGTTTCACCACTGTaGGCAGTCCTTCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPVSPL*AVLRGL
Trigger: AAGACCACGAAGGACTGCCCACAGTGGTGAAACTGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGTTGGGCGGGGAATCTTCATCTTaGCCAGCTTTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSIWVRYRAMFSSRAWLGGESSS*PALLLL
Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATTCCCC...GCCCAACCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGCGTCCACGTCTGCCTaGGACAGTGAGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSASTSA*DSEYPW
Trigger: CCAGGGGTACTCACTGTCCCAGGCAGACGTGGACGC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGCCACGTGGAAGAGCTaGGGGTCAGCGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPATWKS*GSAGGA
Trigger: GGCCCCGCCCGCTGACCCCCAGCTCTTCCACGTGGC...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACGGCCTTTGCTTGCTTaGAGCCTGCAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSRPLLA*SLQGWP
Trigger: AGGCCAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGACGGCCTTTGCTTGCTTaGAGCCTGCAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRRPLLA*SLQGWP
Trigger: AGGCCAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCG...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCTTCCTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQLPCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGGAAG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAACAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRLILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAALILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTTCTTTCTCAAACTGACCAGTaGTGTCAACAGGAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: QLCCFLFLFPPGRLLFLLSQTDQ*CQQERE
Trigger: TTCGCGCTCCTGTTGACATCACTGGTCAGTTTGAGA...AAGAAGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCCCCACTTCTCAAACTaGCCAGTGATGTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRPHFSN*PVMSTG
Trigger: TCCTGTTGACATCACTGGTCAGTTTGAGAAGTGGGG...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGCCCCACTTCTCAAACTaGCCAGTGATGTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQPHFSN*PVMSTG
Trigger: TCCTGTTGACATCACTGGTCAGTTTGAGAAGTGGGG...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCCCCACTTCTCAAACTaGCCAGTGATGTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAPHFSN*PVMSTG
Trigger: TCCTGTTGACATCACTGGTCAGTTTGAGAAGTGGGG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCCGCATCTCTTCCATaGCGGTGCGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASPASLP*RCGCQH
Trigger: ATGTTGACACCCGCACCGTCATGGAAGAGATGCGGG...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRSSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAASSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGGCCAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTGTATTTGTCGGTTTCTaGCAAGAACATCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: WPALLLLVPVSSGPPPLSVFVGF*QEHLTG
Trigger: CCCAGTGAGATGTTCTTGTCAGAAACCGACAAATAC...AGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAACTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLELGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCATAGCTACGCGTGCTaGGGTGCTCGTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLHSYAC*GARSGL
Trigger: AAGCCCTGAACGAGCACCTCAGCACGCGTAGCTATG...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGGGGCCGAGAGCTGCCTaGACGCGTCCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTGPRAA*TRPRLP
Trigger: AGGCAGACGTGGACGCGTTCAGGCAGCTCTCGGCCC...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp TTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTACTCAAGTTCAATGTTaGCTTGGCCGCTTAATTGAG +
Preference number: 4 (lower is better)
Translates to: FRPLLPILLEQVVLPGPLTQVQC*LGRLIE
Trigger: CTCAATTAAGCGGCCAAGTCAACATTGAACTTGAGT...AAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPGDHWG*TRRPLP
Trigger: GGGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCTGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTATGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNRWFCRALLMILSSISVCKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...TACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000439280.6
ENST00000527330.2
ENST00000531387.5
ENST00000626648.2
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAATGTAAAGGTGGAGTCTaGATGGCTGGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLECKGGV*MAGSQQ
Trigger: CTGCTGGGACCCAGCCATGCAGACTCCACCTTTACA...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCACTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLEILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCTGTGGCAAGCTGCACTaGGTGCTGAATCCGTTCGAG +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGCGKLH*VLNPFE
Trigger: CTCGAACGGATTCAGCACGCAGTGCAGCTTGCCACA...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGCTCACTCAGGCGGTCTaGAGAGATGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLLTQAV*RDAQVT
Trigger: GGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAG...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRVGLRL*QLIVMV
Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTALTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHLTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGACACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCATCTCAGGGACTTTTTaGTCTCGGGCAATCTTCCGC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAISGTF*SRAIFR
Trigger: GCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGAT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGATCTCAGGGACTTTTTaGTCTCGGGCAATCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQISGTF*SRAIFR
Trigger: GCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGAT...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCCTTGGCCAGCTTTGCTaGTTCTTGTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSLGQLC*FLFLFP
Trigger: AGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCAAG...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTAGCAGGAGGGGACCACTaGGGCTGCACACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LLRKIYYQCLRANDDTNLAGGDH*GCTRRP
Trigger: AGGCCGGCGTGTGCAGCCCCAGTGGTCCCCTCCTGC...TAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LLEQVVLPGPLDDLVINIKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...GATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGCAGCTTGGAGAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GSLEKMELSVTSQPSVESYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...GGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTCTCCAAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGATCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATTTTTGCAGCCTGCAATaGTCAGGTGGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHFCSLQ*SGGLCA
Trigger: TGCACACAGGCCACCTGACCATTGCAGGCTGCAAAA...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTATPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCREALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTTTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAAAGATCTTCAGCATATaGGTGAGGTACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRKIFSI*VRYRAM
Trigger: CATCGCCCTGTACCTCACCCATATGCTGAAGATCTT...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGGGGGAATCTTCATCTTaGCCAGCTTTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KSQSCAPSLEASILGHLQGESSS*PALLLL
Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATTCCCC...CTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGCCTCCATGTCATGTGTaGGCAGACCATGCTTACATT +
Preference number: 4 (lower is better)
Translates to: KSQSCAPSLEASILGHLQPPCHV*ADHAYI
Trigger: AATGTAAGCATGGTCTGCCCACACATGACATGGAGG...CTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACTTCCTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTALPCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGGAAG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGTCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQSHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCTCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAASHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGTCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRSHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFTFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGATGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTALILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHLILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGAAAGAACTTCTCATATTaGAGCGCTGACTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: KVSPVPPHWKLPFWAICRKNFSY*SADSMV
Trigger: CACCATGGAGTCAGCGCTTCAATATGAGAAGTTCTT...TCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCTCTCAAACTGACCAGTaGTGTCAACAGGAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: LLEQVVLPGPLDDLVINISQTDQ*CQQERE
Trigger: TTCGCGCTCCTGTTGACATCACTGGTCAGTTTGAGA...GATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACCCGCATCTCTTCCATaGCGGTGCGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSPASLP*RCGCQH
Trigger: ATGTTGACACCCGCACCGTCATGGAAGAGATGCGGG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATTCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHSSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCGTATTTGTCGGTTTCTaGCAAGAACATCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SPVPPHWKLPFWAICRYSVFVGF*QEHLTG
Trigger: CCCAGTGAGATGTTCTTGTCAGAAACCGACAAATAC...GGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACATAGCTACGCGTGCTaGGGTGCTCGTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSHSYAC*GARSGL
Trigger: AAGCCCTGAACGAGCACCTCAGCACGCGTAGCTATG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAGGGCCGAGAGCTGCCTaGACGCGTCCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTGPRAA*TRPRLP
Trigger: AGGCAGACGTGGACGCGTTCAGGCAGCTCTCGGCCC...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp CTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTTAGGAATGAAGGAATaGCGATCACAAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LQASSPDTARTGGSAGPSLGMKE*RSQEMQ
Trigger: TTGCATTTCTTGTGATCGTCATTCCTTCATTCCTAA...AGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACGCCGGCCTTTGCCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LLRKIYYQCLRANDDTNLRRPLP*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCGGCG...TAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGAGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCAGCTTGGAGAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: GSLEKMELSVTSQPSVESSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...GGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTCTCCAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAACTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLELFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGATCCTCCAAGAGCTGTaGCGCTTCAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLILQEL*RFRPLL
Trigger: GAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGAT...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCATCCGTTCGAGCATCTaGTTTTTATCGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAIRSSI*FLSGSV
Trigger: CACGGATCCCGATAAAAAGCAGATGCTCGAACGGAT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGATCCGTTCGAGCATCTaGTTTTTATCGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRIRSSI*FLSGSV
Trigger: CACGGATCCCGATAAAAAGCAGATGCTCGAACGGAT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGCCCGTGAGTCTGGACTaGACAGCTTTCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLPVSLD*TAFSSG
Trigger: GCCACTTGAGAAAGCTGTGCAGTCCAGACTCACGGG...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGGCGGTCTGCAGAGATaGTCAGGTCACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSGGLQR*SGHLPL
Trigger: AAGGGGAAGGTGACCTGAGCATCTCTGCAGACCGCC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLVGLRL*QLIVMV
Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGCAGCTTGGAGAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GSLEKMELSVTSQPSVESVGLRL*QLIVMV
Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...GGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTCTCCAAGCTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGTCAGGTGGCCTGTGTaGAGGAAGTACCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSVRWPV*RKYLTQ
Trigger: CTGGGTCAGGTACTTCCTGCACACAGGCCACCTGAC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCCTTGGCCAGCTTTGCTaGTTCTTGTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAALGQLC*FLFLFP
Trigger: AGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCAAG...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGGCGGGGCCGAGAGCTaGCTGAACGCGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNGGAES*LNASTS
Trigger: AGACGTGGACGCGTTCAGGCAGCTCTCGGCCCCGCC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAGGCGGGGCCGAGAGCTaGCTGAACGCGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTGGAES*LNASTS
Trigger: AGACGTGGACGCGTTCAGGCAGCTCTCGGCCCCGCC...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSRSASM*LNHRAT
Trigger: CGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTGDHWG*TRRPLL
Trigger: AAGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCACGAAAAGCCCATTATaGCCCTCAACTCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMITKSPL*PSTQVQ
Trigger: TTGAACTTGAGTTGAGGGGCATAATGGGCTTTTCGT...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439280.6
ENST00000632806.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACGCAAAGGAAAAGCCTaGTGCCCGGAGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSRKGKA*CPEESA
Trigger: GGCAGATTCCTCCGGGCAGCAGGCTTTTCCTTTGCG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529772.5
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATAAGAGATGTAGGACCTaGCGTGCCCCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINKRCRT*RAPCEM
Trigger: CATCTCACATGGGGCACGCCAGGTCCTACATCTCTT...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTTTATCGGGATCCGTaGTCTCATTTAATTTTACTG +
Preference number: 4 (lower is better)
Translates to: ASGLFSRYCSNRWFCRALFYRDP*SHLILL
Trigger: CAGTAAAATTAAATGAGACCACGGATCCCGATAAAA...GAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATTCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCAGTAGACAGACCCATTaGAGACATAGCCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAASRQTH*RHSRNR
Trigger: ACGGTTACGGCTATGTCTCCAATGGGTCTGTCTACT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CAGCTTTGCTGCTTCTTGTTCCTGTTTCCTCCGGGCCGCCTCCTCTTTCTTCTTATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: QLCCFLFLFPPGRLLFLLIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...AAGAAGAAAGAGGAGGCGGCCCGGAGGAAACAGGAACAAGAAGCAGCAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGATTTTGCAGCCTGCAATaGTCAGGTGGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRFCSLQ*SGGLCA
Trigger: TGCACACAGGCCACCTGACCATTGCAGGCTGCAAAA...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCTTTTGCAGCCTGCAATaGTCAGGTGGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSFCSLQ*SGGLCA
Trigger: TGCACACAGGCCACCTGACCATTGCAGGCTGCAAAA...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGAAGATCTTCAGCATATaGGTGAGGTACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQKIFSI*VRYRAM
Trigger: CATCGCCCTGTACCTCACCCATATGCTGAAGATCTT...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGATGGAATTGTCAGTGACATCACAGCCAAGTGTAGAATCCAGCCAGTCAGAGTGGGCAGTCCTTCGTaGTCTTCAAACCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: EDGIVSDITAKCRIQPVRVGSPS*SSNRTP
Trigger: TGGGGTGCGGTTTGAAGACCACGAAGGACTGCCCAC...TCTGACTGGCTGGATTCTACACTTGGCTGTGATGTCACTGACAATTCCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCCAGTTTCACCACTGTaGGCAGTCCTTCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGPVSPL*AVLRGL
Trigger: AAGACCACGAAGGACTGCCCACAGTGGTGAAACTGG...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGATCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRSHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR TCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAATCTCAAACTGACCAGTaGTGTCAACAGGAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLESQTDQ*CQQERE
Trigger: TTCGCGCTCCTGTTGACATCACTGGTCAGTTTGAGA...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCTCTCAAACTGACCAGTaGTGTCAACAGGAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSSQTDQ*CQQERE
Trigger: TTCGCGCTCCTGTTGACATCACTGGTCAGTTTGAGA...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCCCCACTTCTCAAACTaGCCAGTGATGTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGPHFSN*PVMSTG
Trigger: TCCTGTTGACATCACTGGTCAGTTTGAGAAGTGGGG...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGATCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRSSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAATCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLESSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGTATTTGTCGGTTTCTaGCAAGAACATCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRVFVGF*QEHLTG
Trigger: CCCAGTGAGATGTTCTTGTCAGAAACCGACAAATAC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGTATTTGTCGGTTTCTaGCAAGAACATCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQVFVGF*QEHLTG
Trigger: CCCAGTGAGATGTTCTTGTCAGAAACCGACAAATAC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAACACTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LEQVVLPGPLDDLVINIRNTCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGTGTT...ACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAGCACACGCCGGCCTTTaGCCTGCTGCCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTAHAGL*PAARRN
Trigger: ATTCCTCCGGGCAGCAGGGCAAAGGCCGGCGTGTGC...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCATCCGTTCGAGCATCTaGTTTTTATCGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: LLEQVVLPGPLDDLVINIIRSSI*FLSGSV
Trigger: CACGGATCCCGATAAAAAGCAGATGCTCGAACGGAT...GATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAATCCGTTCGAGCATCTaGTTTTTATCGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPIRSSI*FLSGSV
Trigger: CACGGATCCCGATAAAAAGCAGATGCTCGAACGGAT...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCGTGACTTTGACATTTTaGAGCCTGCAATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAAVTLTF*SLQWSG
Trigger: ACCTGACCATTGCAGGCTGCAAAATGTCAAAGTCAC...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGGTGACTTTGACATTTTaGAGCCTGCAATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRVTLTF*SLQWSG
Trigger: ACCTGACCATTGCAGGCTGCAAAATGTCAAAGTCAC...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGGTGACTTTGACATTTTaGAGCCTGCAATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQVTLTF*SLQWSG
Trigger: ACCTGACCATTGCAGGCTGCAAAATGTCAAAGTCAC...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGCTGACTCCATGGTGTTaGTGGAGTAGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLLTPWC*WSSPGC
Trigger: ACACCCTGGACTACTCCAGCAACACCATGGAGTCAG...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACACGGCTTTCCGGGCTaGCATATAGAGGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSHGFPG*HIEVAL
Trigger: CAGTGCAACCTCTATATGGCAGCCCGGAAAGCCGTG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAATCTCAGGGACTTTTTaGTCTCGGGCAATCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRISGTF*SRAIFR
Trigger: GCGGAAGATTGCCCGAGAGCAAAAAGTCCCTGAGAT...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACTTGGCCAGCTTTGCTaGTTCTTGTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTALGQLC*FLFLFP
Trigger: AGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCAAG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCCTTGGCCAGCTTTGCTaGTTCTTGTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CSNRWFCRALLMILSSISLGQLC*FLFLFP
Trigger: AGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCAAG...GGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp TGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGACTTGGCCAGCTTTGCTaGTTCTTGTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CPLTGSFHSGPSADIPCRLGQLC*FLFLFP
Trigger: AGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCAAG...TCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLEKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAGGGGACCACTGGGGCTaGACACGCCGGCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTGDHWG*TRRPLL
Trigger: AAGCAAAGGCCGGCGTGTGCAGCCCCAGTGGTCCCC...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCTGCGTCATAGACGGTTaGCCCACAGCAATACCACGT +
Preference number: 4 (lower is better)
Translates to: SLEASILGHLQIFLVELLCVIDG*PTAIPR
Trigger: ACGTGGTATTGCTGTGGGCCAACCGTCTATGACGCA...GAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATCTCAAGTGGCTCTGTaGCAAGCTGCACTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSQVAL*QAALRA
Trigger: AGCACGCAGTGCAGCTTGCCACAGAGCCACTTGAGA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGCTTCCATGTCTCTGTaGAAGTCCCCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSASMSL*KSPSQN
Trigger: GTTCTGGGAGGGGGACTTCCACAGAGACATGGAAGC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAAGTAGACAGACCCATTaGAGACATAGCCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPSRQTH*RHSRNR
Trigger: ACGGTTACGGCTATGTCTCCAATGGGTCTGTCTACT...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATAGTAGACAGACCCATTaGAGACATAGCCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHSRQTH*RHSRNR
Trigger: ACGGTTACGGCTATGTCTCCAATGGGTCTGTCTACT...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAAGCTCATTGTCATGGTaGGGGAACCGGAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSSLSW*GNRRSN
Trigger: GTTCGACCTCCGGTTCCCCCACCATGACAATGAGCT...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTTTTGCAGCCTGCAATaGTCAGGTGGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLFCSLQ*SGGLCA
Trigger: TGCACACAGGCCACCTGACCATTGCAGGCTGCAAAA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCAAAGATCTTCAGCATATaGGTGAGGTACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPKIFSI*VRYRAM
Trigger: CATCGCCCTGTACCTCACCCATATGCTGAAGATCTT...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGCCAGTTTCACCACTGTaGGCAGTCCTTCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLPVSPL*AVLRGL
Trigger: AAGACCACGAAGGACTGCCCACAGTGGTGAAACTGG...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGGGGAATCTTCATCTTaGCCAGCTTTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAGESSS*PALLLL
Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATTCCCC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCACCTCCATGTCATGTGTaGGCAGACCATGCTTACATT +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAPPCHV*ADHAYI
Trigger: AATGTAAGCATGGTCTGCCCACACATGACATGGAGG...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR CCA 90 bp TGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCACCTCCATGTCATGTGTaGGCAGACCATGCTTACATT +
Preference number: 4 (lower is better)
Translates to: WFKKSVLCPLTGSFHSGPPPCHV*ADHAYI
Trigger: AATGTAAGCATGGTCTGCCCACACATGACATGGAGG...TGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR TCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLTFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR TCA 90 bp GGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GPKGDCKHDRSAGTLSLRTFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...CCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp GACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGCCACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: DCKHDRSAGTLSLRQTAATFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...GGCTGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp CCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PKGDCKHDRSAGTLSLRQTFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...CTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGCCTTCCACGAGTGCATaGGGAAGGCCAGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTPSTSA*GRPAAT
Trigger: AGTTGCGGCTGGCCTTCCTCATGCACTCGTGGAAGG...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGCTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLLILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATAAGAACTTCTCATATTaGAGCGCTGACTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHKNFSY*SADSMV
Trigger: CACCATGGAGTCAGCGCTTCAATATGAGAAGTTCTT...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCAAGAACTTCTCATATTaGAGCGCTGACTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: CSNRWFCRALLMILSSISKNFSY*SADSMV
Trigger: CACCATGGAGTCAGCGCTTCAATATGAGAAGTTCTT...GGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTCTCAAACTGACCAGTaGTGTCAACAGGAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLSQTDQ*CQQERE
Trigger: TTCGCGCTCCTGTTGACATCACTGGTCAGTTTGAGA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATATCCGTAATCCCCACTTCTCAAACTaGCCAGTGATGTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: EQVVLPGPLDDLVINIRNPHFSN*PVMSTG
Trigger: TCCTGTTGACATCACTGGTCAGTTTGAGAAGTGGGG...ATTACGGATATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGTCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLSSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACACCCGCAGGGCATCGCTaGGCTGCAGAATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTPAGHR*AAESQG
Trigger: TCCCTGAGATTCTGCAGCTCAGCGATGCCCTGCGGG...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTGAGGCAGACAGCAGTATTTGTCGGTTTCTaGCAAGAACATCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: GDCKHDRSAGTLSLRQTAVFVGF*QEHLTG
Trigger: CCCAGTGAGATGTTCTTGTCAGAAACCGACAAATAC...TGCTGTCTGCCTCAGTGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCAACACTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSNTCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGTGTT...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp ACATCCTCCAAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACTTAGGAATGAAGGAATaGCGATCACAAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: TSSKSCAASGLFSRYCSNLGMKE*RSQEMQ
Trigger: TTGCATTTCTTGTGATCGTCATTCCTTCATTCCTAA...GTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTTGGAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCGGCCTTTGCCCTGCTaGCCGGAGGAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNRPLPC*PEESAM
Trigger: CATGGCAGATTCCTCCGGGCAGCAGGGCAAAGGCCG...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000397111.9
ENST00000632612.1
ENST00000633248.1
CDS-3UTR GCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTCTTCTCCCGATACTaGTCGAACAGGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSLFSRY*SNRWFC
Trigger: GCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGAATCCGTTCGAGCATCTaGTTTTTATCGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: HSGPSADIPCRASPEPRRIRSSI*FLSGSV
Trigger: CACGGATCCCGATAAAAAGCAGATGCTCGAACGGAT...TCTTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGGCCGAGCACTCGATATaGCAGCCCGGACGACCCTTT +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTAEHSI*QPGRPF
Trigger: AAAGGGTCGTCCGGGCTGGCATATCGAGTGCTCGGC...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAAAGCCCCTAGGAGGGTaGCTGCCATGGCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTKPLGG*LPWPST
Trigger: AGTGCTCGGCCATGGCAGGCACCCTCCTAGGGGCTT...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp ACAGCAATACCACGTCACCTTTTTCCCATCTTGAGGTATGAACACTTCCTTTGTGTCAGGTGGCCTGTGTaGAGGAAGTACCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: TAIPRHLFPILRYEHFLCVRWPV*RKYLTQ
Trigger: CTGGGTCAGGTACTTCCTGCACACAGGCCACCTGAC...ACAAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGTGACGTGGTATTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCTTGGCCAGCTTTGCTaGTTCTTGTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGLGQLC*FLFLFP
Trigger: AGGAAACAGGAACAAGAAGCAGCAAAGCTGGCCAAG...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGAAAAAGTCAGTCCTGTaGCCCCTCACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLKKSVL*PLTGSF
Trigger: GAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTT...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAACGCCGGCCTTTGCTTaGTTGGAGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTTPAFA*LEPAGL
Trigger: CAGCCCTGCAGGCTCCAAGCAAGCAAAGGCCGGCGT...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGCACACGCCGGCCTTTaGCTGATGAGCAGCCGACCA +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPAHAGL*LMSSRP
Trigger: TGGTCGGCTGCTCATCAGGCAAAGGCCGGCGTGTGC...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529772.5
ENST00000633563.1
CDS-3UTR CCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGGAATCTGCCATGGCTaGGAATCCCGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPGICHG*ESRTRS
Trigger: GCTGCGGGTCCGGGATTCCCAGCCATGGCAGATTCC...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TGTGTGGGCAGACCATTTTCATCAAACTTGGAGTATTTGTCGGTTTCTGACAAGTACTGCTCGAACAGGTaGTTCTGCCGGGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CVGRPFSSNLEYLSVSDKYCSNR*FCRALL
Trigger: CAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTA...CTTGTCAGAAACCGACAAATACTCCAAGTTTGATGAAAATGGTCTGCCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLEIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATGGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: NGLKSQSCAPSLEASILGIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...GCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTAGGAGGGTGCCTGCCATaGCCGAGCACTCGATATGCC +
Preference number: 4 (lower is better)
Translates to: LLRKIYYQCLRANDDTNLGGCLP*PSTRYA
Trigger: GGCATATCGAGTGCTCGGCCATGGCAGGCACCCTCC...TAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATTTTGCAGCCTGCAATaGTCAGGTGGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSFCSLQ*SGGLCA
Trigger: TGCACACAGGCCACCTGACCATTGCAGGCTGCAAAA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAACTCCATGGTGTTGCTaGAGTAGTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSTPWCC*SSPGCP
Trigger: AGGACACCCTGGACTACTCCAGCAACACCATGGAGT...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCAGAAGCGCTGACTCCATaGTGTTGCTGGAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSEALTP*CCWSSP
Trigger: TGGACTACTCCAGCAACACCATGGAGTCAGCGCTTC...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCAAGATCTTCAGCATATaGGTGAGGTACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSKIFSI*VRYRAM
Trigger: CATCGCCCTGTACCTCACCCATATGCTGAAGATCTT...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACCAGTTTCACCACTGTaGGCAGTCCTTCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSPVSPL*AVLRGL
Trigger: AAGACCACGAAGGACTGCCCACAGTGGTGAAACTGG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCCTCGAAGGGGAATCTTCATCTTaGCCAGCTTTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SILGHLQIFLVELLLSLEGESSS*PALLLL
Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATTCCCC...TTCGAGGCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGCCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTAGCGTCCACGTCTGCCTaGGACAGTGAGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLRKIYYQCLRANDDTNLASTSA*DSEYPW
Trigger: CCAGGGGTACTCACTGTCCCAGGCAGACGTGGACGC...TAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp GGTTTAAAAAGTCAGTCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCCTCCATGTCATGTGTaGGCAGACCATTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: GLKSQSCAPSLEASILGHPPCHV*ADHFHQ
Trigger: TTGATGAAAATGGTCTGCCCACACATGACATGGAGG...ATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGACTGACTTTTTAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTTCCTTGTTCCTGGTaGGGCTGTTGTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSLPCSW*GCCKGG
Trigger: TCCACCTTTACAACAGCCTCACCAGGAACAAGGAAG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTTCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASSHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR TCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGGCTTCAGGGCGGCCTaGACATCCTCCAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNGFRAA*TSSKSC
Trigger: ACAGCTCTTGGAGGATGTTCAGGCCGCCCTGAAGCC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATGTGCAGGAAGTACCTaGCCCAGCAGTCGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSCAGST*PSSRFQ
Trigger: TTGAAAACGACTGCTGGGTCAGGTACTTCCTGCACA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCACTCATATTGAAGCGCTaGCTCCATGGTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSLILKR*LHGVAG
Trigger: TCCAGCAACACCATGGAGTCAGCGCTTCAATATGAG...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATCTCAAACTGACCAGTaGTGTCAACAGGAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSQTDQ*CQQERE
Trigger: TTCGCGCTCCTGTTGACATCACTGGTCAGTTTGAGA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGCCCGCATCTCTTCCATaGCGGTGCGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTPASLP*RCGCQH
Trigger: ATGTTGACACCCGCACCGTCATGGAAGAGATGCGGG...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATCTTCAGCATATGGGTaGGGTACAGGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSSAYG*GTGRCS
Trigger: AGAACATCGCCCTGTACCTCACCCATATGCTGAAGA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTALLCA*TTEPRG
Trigger: TCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGC...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNALLCA*TTEPRG
Trigger: TCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR TCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGACACTTCCTAGAATCTaGTGCAACCGCCGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTTLPRI*CNRRPG
Trigger: TCCGGGGCGGCGGTTGCATCAGATTCTAGGAAGTGT...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397111.9
ENST00000633248.1
CDS-3UTR TCA 90 bp AAGATCTTCAGCATATGGGTGAGGTACAGGGCGATGTTCTCCAGCAGAGCCTGGACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KIFSIWVRYRAMFSSRAWTFFPS*GMNTSF
Trigger: AAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...CCAGGCTCTGCTGGAGAACATCGCCCTGTACCTCACCCATATGCTGAAGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACTCCCGGACCCGCAGCTaGGGCTACAGACACTTCCTA +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNSRTRS*GYRHFL
Trigger: TAGGAAGTGTCTGTAGCCGCAGCTGCGGGTCCGGGA...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp ACAGCAATACCACGTCACCTTTTTCCCATCTTGAGGTATGAACACTTCCTTTGTTCGAACAGGTGGTTCTaGCGGGCCCTCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: TAIPRHLFPILRYEHFLCSNRWF*RALLMI
Trigger: GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGA...ACAAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGTGACGTGGTATTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR GCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTATCCGTTCGAGCATCTaGTTTTTATCGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASIRSSI*FLSGSV
Trigger: CACGGATCCCGATAAAAAGCAGATGCTCGAACGGAT...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGCTCACTCAGGCGGTCTaGAGAGATGCTCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTLTQAV*RDAQVT
Trigger: GGTGACCTGAGCATCTCTGCAGACCGCCTGAGTGAG...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGGTCAGGTGGCCTGTGTaGAGGAAGTACCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTVRWPV*RKYLTQ
Trigger: CTGGGTCAGGTACTTCCTGCACACAGGCCACCTGAC...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp ACAGCAATACCACGTCACCTTTTTCCCATCTTGAGGTATGAACACTTCCTTTGTAAGGCCAGCCGCAACTaGCGTGCTGAGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TAIPRHLFPILRYEHFLCKASRN*RAECFF
Trigger: GAAAAAGCACTCAGCACGGCAGTTGCGGCTGGCCTT...ACAAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGTGACGTGGTATTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531387.5
ENST00000634057.1
CDS-3UTR GCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGTGTCCTTCCACGAGTaGATGAGGAAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNVSFHE*MRKASR
Trigger: GCGGCTGGCCTTCCTCATGCACTCGTGGAAGGACAC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp TCCTGTGCCCCCTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTTGTGTGGGCAGACCATaGTTACATTTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: SCAPSLEASILGHLQIFLCVGRP*LHFHQT
Trigger: AGTTTGATGAAAATGTAAGCATGGTCTGCCCACACA...AAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTCGTTCAGGGCTTGTaGCCTGGCTGCCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNLVQGL*PGCLVT
Trigger: AGTGACGAGGCAGCCAGGGCACAAGCCCTGAACGAG...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACGCGTGCTGAGGTaGTCGTTCAGGGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNLRVLR*SFRACA
Trigger: GGCACAAGCCCTGAACGAGCACCTCAGCACGCGTAG...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACTGCTTGCTTGGAGCCTaGAGGGCTGGCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNCLLGA*RAGLCH
Trigger: GTGGCAAAGGCCAGCCCTGCAGGCTCCAAGCAAGCA...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACATGCTTGCTTGGAGCCTaGAGGGCTGGCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTCLLGA*RAGLCH
Trigger: GTGGCAAAGGCCAGCCCTGCAGGCTCCAAGCAAGCA...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR CCA 90 bp AAGAGCTGTGCCGCTTCAGGCCTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTTTTATCGGGATCCGTaGTCTCATTTAATTTTACTG +
Preference number: 4 (lower is better)
Translates to: KSCAASGLFSRYCSNRWFFYRDP*SHLILL
Trigger: CAGTAAAATTAAATGAGACCACGGATCCCGATAAAA...GAACCACCTGTTCGAGCAGTATCGGGAGAAGAGGCCTGAAGCGGCACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCTTCTCCCGATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTTTATCGGGATCCGTaGTCTCATTTAATTTTACTG +
Preference number: 4 (lower is better)
Translates to: LFSRYCSNRWFCRALLMIFYRDP*SHLILL
Trigger: CAGTAAAATTAAATGAGACCACGGATCCCGATAAAA...GATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTATCGGGAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439280.6
ENST00000531387.5
ENST00000632806.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGAGTAGACAGACCCATTaGAGACATAGCCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLSRQTH*RHSRNR
Trigger: ACGGTTACGGCTATGTCTCCAATGGGTCTGTCTACT...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTATAAGGCAAAGTCGTTaGGAGAGCGCTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASIRQSR*ESASHS
Trigger: TGAGTGAGAAGCGCTCTCCCAACGACTTTGCCTTAT...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp CTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTAGCCAGCTCATTGTCATaGTGGGGGAACCGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LLRKIYYQCLRANDDTNLASSLS*WGNRRS
Trigger: CGACCTCCGGTTCCCCCACCATGACAATGAGCTGGC...TAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCCAGCAGAGCCTGGTTaGGCCTCTTCCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNPAEPG*ASSSRL
Trigger: AAGCCGTGAGGAAGAGGCCCAACCAGGCTCTGCTGG...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGTTCTCCAGCAGAGCCTaGTTGGGCCTCTTCCTCACG +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTFSSRA*LGLFLT
Trigger: CGTGAGGAAGAGGCCCAACCAGGCTCTGCTGGAGAA...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGAAGATCTTCAGCATATaGGTGAGGTACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLKIFSI*VRYRAM
Trigger: CATCGCCCTGTACCTCACCCATATGCTGAAGATCTT...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGGGGAATCTTCATCTTaGCCAGCTTTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLGESSS*PALLLL
Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATTCCCC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACACCTGTGCCCCCTCACTaGAAGCTTCCATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTPVPPH*KLPFWA
Trigger: GGCCCAGAATGGAAGCTTCCAGTGAGGGGGCACAGG...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR CCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACATGTAGTTCAACCCAATaGCGACCCGCGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTCSSTQ*RPALRS
Trigger: GCTCCGGAGCGCGGGTCGCCATTGGGTTGAACTACA...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397111.9
ENST00000633248.1
CDS-3UTR TCA 90 bp AATTTAGGACCCAAGGGTGACTGTAAACATGATAGGAGCGCTGGGACATTGTCATCCCATCTTGAGGTATaGACACTTCCTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLGPKGDCKHDRSAGTLSSHLEV*TLPCSW
Trigger: CCAGGAACAAGGAAGTGTTCATACCTCAAGATGGGA...TGACAATGTCCCAGCGCTCCTATCATGTTTACAGTCACCCTTGGGTCCTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
CDS-3UTR TCA 90 bp ATACTGCTCGAACAGGTGGTTCTGCCGGGCCCTCTTGATGATCTTGTCATCAATACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: ILLEQVVLPGPLDDLVINTFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...ATTGATGACAAGATCATCAAGAGGGCCCGGCAGAACCACCTGTTCGAGCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527330.2
ENST00000626648.2
CDS-3UTR TCA 90 bp GAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTCCTGAGCACCTTTTTCCCATCTTaGGGTATGAACACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EASILGHLQIFLVELLLSTFFPS*GMNTSL
Trigger: CAAGGAAGTGTTCATACCTCAAGATGGGAAAAAGGT...GCTCAGGAGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000632612.1
ENST00000633563.1
CDS-3UTR TCA 90 bp GTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTACAAGCTGCACTGCGTGCTaGATCCGTTCGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VEKNLLSMSQSQRRHEPTSCTAC*IRSSIC
Trigger: GCAGATGCTCGAACGGATTCAGCACGCAGTGCAGCT...TGTAGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACTCGAACCCACCTCCGTaGATGTCCATCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNSNPPP*MSIEAP
Trigger: AGGGGCTTCGATGGACATTCACGGAGGTGGGTTCGA...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR TCA 90 bp CTCACTGGAAGCTTCCATTCTGGGCCATCTGCAGATATTCCTTGTAGAGCTTCTAAGAACTTCTCATATTaGAGCGCTGACTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LTGSFHSGPSADIPCRASKNFSY*SADSMV
Trigger: CACCATGGAGTCAGCGCTTCAATATGAGAAGTTCTT...AGAAGCTCTACAAGGAATATCTGCAGATGGCCCAGAATGGAAGCTTCCAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278224.13
ENST00000529772.5
ENST00000531387.5
ENST00000632612.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp ACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACCTCCCGCATCTCTTCCATaGCGGTGCGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: TVEKNLLSMSQSQRRHEPPASLP*RCGCQH
Trigger: ATGTTGACACCCGCACCGTCATGGAAGAGATGCGGG...AGGTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGAGGCAGACAGCAGCCACTAGTCCACAATGGTTTAAAAAGTCAGTCCTGGTATTTGTCGGTTTCTaGCAAGAACATCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SLRQTAATSPQWFKKSVLVFVGF*QEHLTG
Trigger: CCCAGTGAGATGTTCTTGTCAGAAACCGACAAATAC...CAGGACTGACTTTTTAAACCATTGTGGACTAGTGGCTGCTGTCTGCCTCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000529772.5
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000633563.1
ENST00000634057.1
CDS-3UTR TCA 90 bp GTCTCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGCTGGGACATTGTCACTaGGGCAGACAGCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: VSLLRKIYYQCLRANDDTLGHCH*GRQQPL
Trigger: TAGTGGCTGCTGTCTGCCTCAGTGACAATGTCCCAG...CGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000633248.1
ENST00000634057.1
CDS-3UTR TCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGTCTGCCTGGGACAGTaGGTACCCCTGGACATAGCT +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNVCLGQ*VPLDIA
Trigger: AGCTATGTCCAGGGGTACTCACTGTCCCAGGCAGAC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380525.9
ENST00000531387.5
ENST00000612826.3
ENST00000634057.1
CDS-3UTR GCA 90 bp TCACTGTTGAGAAAAATTTATTATCAATGTCTCAGAGCCAACGACGACACGAACGTGCCCCATGTGAGATaGGTCATAGACGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLLRKIYYQCLRANDDTNVPHVR*VIDGWP
Trigger: GGGCCAACCGTCTATGACGCATCTCACATGGGGCAC...GTTCGTGTCGTCGTTGGCTCTGAGACATTGATAATAAATTTTTCTCAACAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000278224.13
ENST00000380525.9
ENST00000397111.9
ENST00000531387.5
ENST00000612826.3
ENST00000632612.1
ENST00000633248.1
ENST00000634057.1
CDS-3UTR GCA 90 bp