RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARNS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172508

Ensembl transcript IDs: ENST00000307823.7, ENST00000445895.2, ENST00000525907.1, ENST00000529925.5, ENST00000531040.5, ENST00000531388.1, ENST00000531958.5

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGACAGGAGGGGCTGGGTTTGGGCCCACTCCCACCTGGGGAGCTaGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCC +
Preference number: 1 (lower is better)
Translates to: VDRRGWVWAHSHLGS*RQRCVCVCVCVCVA
Trigger: GGCCACACACACACACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCCCAAACCCAGCCCCTCCTGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 90 bp GAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCAAGAGGCCCTTaGGTCCAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGA +
Preference number: 1 (lower is better)
Translates to: EAVGWTGAFGRARGP*VQDALVSKLPCCSG
Trigger: TCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR GCA 90 bp GCCTGGGGTGAGCAGAAAGAGGATTACTTCTGTCCACAGGCCACCTaGCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAA +
Preference number: 1 (lower is better)
Translates to: AWGEQKEDYFCPQAT*LYRSGRMRQVGCHQ
Trigger: TTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTAATCCTCTTTCTGCTCACCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CCA 90 bp GTGTGTGTGTGTGTGGCCATTGTCATTTCTCCAAGGCTAGAATGCTaGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCAAGAGG +
Preference number: 1 (lower is better)
Translates to: VCVCVAIVISPRLEC*GSCRLDWGLREGKR
Trigger: CCTCTTGCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGAAATGACAATGGCCACACACACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 90 bp ATTACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATaGGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCT +
Preference number: 1 (lower is better)
Translates to: ITSVHRPPASTGQAE*GRLDATKFPAGFRA
Trigger: AGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 90 bp GGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGTGGAGAAGGTTTGTaGTGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTG +
Preference number: 1 (lower is better)
Translates to: GVPEAKAPKLGGEGL*CIGGRCSRVSGPLV
Trigger: CACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCTTCTCCACCGAGCTTTGGTGCTTTGGCCTCTGGCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGGCCATTGTCATTTCTCCAAGGCTAGAATaGTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCAAG +
Preference number: 1 (lower is better)
Translates to: CVCVCVAIVISPRLE*WGSCRLDWGLREGK
Trigger: CTTGCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGAAATGACAATGGCCACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR GCA 90 bp CAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATaGCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGG +
Preference number: 1 (lower is better)
Translates to: QATCLYRSGRMRQVG*HQVSSRLQSYPRIW
Trigger: CCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 90 bp GTTTCCTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTaGGCAGAAAGAGGATTACTTCTGTCCACAGGCCACCTGCCTCTA +
Preference number: 1 (lower is better)
Translates to: VSSHRGNIGSCVCLG*AERGLLLSTGHLPL
Trigger: TAGAGGCAGGTGGCCTGTGGACAGAAGTAATCCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CCA 90 bp GACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTaGGGCCCAGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGA +
Preference number: 1 (lower is better)
Translates to: DKGSSLRFSQDLSKA*GPARSSPLVDGRKR
Trigger: TCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGTGGACAGGAGGGGCTaGGTTTGGGCCCACTCCCAC +
Preference number: 2 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVVDRRG*VWAHSH
Trigger: GTGGGAGTGGGCCCAAACCCAGCCCCTCCTGTCCAC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCAACAGACCTAGGCATTaGAGCGGGCCAGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLNRPRH*SGPGWG
Trigger: GCCCCAGCCTGGCCCGCTGCAATGCCTAGGTCTGTT...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGTGCAGCGGGCCAGGCTaGGGCTGGGGCATGGTGATG +
Preference number: 2 (lower is better)
Translates to: SPLPMLVRCARGQSTKARCSGPG*GWGMVM
Trigger: CATCACCATGCCCCAGCCCCAGCCTGGCCCGCTGCA...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCGATTTGTCCAAGGCTTaGGGCCCAGCCAGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCDLSKA*GPARSS
Trigger: AGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATC...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR TCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGACCGGTCAGGCCGAATaGGGCAGGTTGGATGCCACC +
Preference number: 2 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRTGQAE*GRLDAT
Trigger: GGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR TCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGAGGGCAAGAGGCCCTTaGGTCCAGGATGCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRRARGP*VQDALV
Trigger: CACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR TCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGAGGGCCACTTGTGAATaGGGGCAGGGAGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SPLPMLVRCARGQSTKARRATCE*GQGGEG
Trigger: CCCCTCACCTCCCTGCCCTCATTCACAAGTGGCCCT...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAAACAGACCTAGGCATTaGAGCGGGCCAGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RPNEAGWMPPSFQQASELNRPRH*SGPGWG
Trigger: GCCCCAGCCTGGCCCGCTGCAATGCCTAGGTCTGTT...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCTCTAAATTGCCCTGCTaGTCTGGAACAGACCTAGGC +
Preference number: 2 (lower is better)
Translates to: PRLECWGSCRLDWGLREGSKLPC*SGTDLG
Trigger: GCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGGGGGAAGCTGTAGGCTaGACTGGGGCCTTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVGEAVG*TGAFGR
Trigger: CCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCC...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCCCACCTGGGGAGCTaGCGTCAGAGGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSSHLGS*RQRCVC
Trigger: ACACACACACCTCTGACGCCAGCTCCCCAGGTGGGA...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCCTTGGTGTCTAAATTaGCCTGCTGCTCTGGAACAG +
Preference number: 2 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCPWCLN*PAALEQ
Trigger: CTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAAGGGGAAGCTGTAGGCTaGACTGGGGCCTTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: RFVMHRREVFTCLRATCEGEAVG*TGAFGR
Trigger: CCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCC...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTATGCAGCGGGCCAGGCTaGGGCTGGGGCATGGTGATG +
Preference number: 2 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVCSGPG*GWGMVM
Trigger: CATCACCATGCCCCAGCCCCAGCCTGGCCCGCTGCA...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR TCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAATGGCAGGAAGAGAGTaGGACCTGGAGAGGTGGACA +
Preference number: 2 (lower is better)
Translates to: RPNEAGWMPPSFQQASELMAGRE*DLERWT
Trigger: TGTCCACCTCTCCAGGTCTCACTCTCTTCCTGCCAT...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGATTGCCCTGCTGCTCTaGAACAGACCTAGGCATTGC +
Preference number: 2 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRIALLL*NRPRHC
Trigger: GCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAAT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCGTGTGTGTGTGTGTGTaGCCATTGTCATTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCVCVCV*PLSFLQ
Trigger: TTGGAGAAATGACAATGGCCACACACACACACACAC...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCTCCCACCTGGGGAGCTaGCGTCAGAGGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGSHLGS*RQRCVC
Trigger: ACACACACACCTCTGACGCCAGCTCCCCAGGTGGGA...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGTGTCTAAATTGCCCTaGTGCTCTGGAACAGACCTA +
Preference number: 2 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVVSKLP*CSGTDL
Trigger: TAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACAC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGATTGCCCTGCTGCTCTaGAACAGACCTAGGCATTGC +
Preference number: 2 (lower is better)
Translates to: SPLPMLVRCARGQSTKARIALLL*NRPRHC
Trigger: GCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAAT...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGCAGTTGTGTCTGCCTaGGGTGAGCAGAAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: SPLPMLVRCARGQSTKARAVVSA*GEQKED
Trigger: ATCCTCTTTCTGCTCACCCCAGGCAGACACAACTGC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTCCTTGGTGTCTAAATTaGCCTGCTGCTCTGGAACAG +
Preference number: 2 (lower is better)
Translates to: SQVLSSCRWQEESETWRGPWCLN*PAALEQ
Trigger: CTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGG...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGTCTCCAAGGCTAGAATaGTGGGGAAGCTGTAGGCTG +
Preference number: 2 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVSPRLE*WGSCRL
Trigger: CAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGA...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAACCAAGGCTAGAATGCTaGGGAAGCTGTAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: RFVMHRREVFTCLRATCEPRLEC*GSCRLD
Trigger: GTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCTCTCCTCTTGTAGATaGCAGGAAGAGAGTGAGACC +
Preference number: 2 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYLSSCR*QEESET
Trigger: GGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAG...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGTCTAAATTGCCCTGCTaGTCTGGAACAGACCTAGGC +
Preference number: 2 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVSKLPC*SGTDLG
Trigger: GCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGGAGTCCAGGATGCCTTaGTGTCTAAATTGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVESRMP*CLNCPA
Trigger: AGCAGGGCAATTTAGACACCAAGGCATCCTGGACTC...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTACCAAGGCTAGAATGCTaGGGAAGCTGTAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVPRLEC*GSCRLD
Trigger: GTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATGTGTGTGTGTGTGTGTaGCCATTGTCATTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYVCVCV*PLSFLQ
Trigger: TTGGAGAAATGACAATGGCCACACACACACACACAC...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCTCTCCTCTTGTAGATaGCAGGAAGAGAGTGAGACC +
Preference number: 2 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGLSSCR*QEESET
Trigger: GGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAG...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCATCAAAACAGAAACCTaGACCCTGCATCATGTCCTG +
Preference number: 2 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTIKTET*TLHHVL
Trigger: CAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGAT...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CCA 72 bp AGGGGCTGGGTTTGGGCCCACTCCCACCTGGGGAGCTaGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: RGWVWAHSHLGS*RQRCVCVCVCV
Trigger: CACACACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCCCAAACCCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCGAGGGCAAGAGGCCCTaGAGTCCAGGATGCCTTGGT +
Preference number: 3 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCEGKRP*SPGCLG
Trigger: ACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCTC...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTACAGGAGGGGCTGGGTTaGGGCCCACTCCCACCTGGG +
Preference number: 3 (lower is better)
Translates to: RPNEAGWMPPSFQQASELQEGLG*GPLPPG
Trigger: CCCAGGTGGGAGTGGGCCCAAACCCAGCCCCTCCTG...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 72 bp GTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATaGGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: VHRPPASTGQAE*GRLDATKFPAG
Trigger: GCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCGCCTTGGTGTCTAAATaGCCCTGCTGCTCTGGAACA +
Preference number: 3 (lower is better)
Translates to: PRLECWGSCRLDWGLREGALVSK*PCCSGT
Trigger: TGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGC...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGAGGGCAAGAGGCCCTaGAGTCCAGGATGCCTTGGT +
Preference number: 3 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVEGKRP*SPGCLG
Trigger: ACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCTC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTAGGTTTTCCCAGGATTaGTCCAAGGCTTGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQARFSQD*SKAWGP
Trigger: TGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCT...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CCA 72 bp CACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTaGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTA +
Preference number: 3 (lower is better)
Translates to: HLPLPVRPNEAG*MPPSFQQASEL
Trigger: TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGAGGTTTTCCCAGGATTaGTCCAAGGCTTGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRRFSQD*SKAWGP
Trigger: TGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCGGGGAACATAGGCAGTaGTGTCTGCCTGGGGTGAGC +
Preference number: 3 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTGEHRQ*CLPGVS
Trigger: GCTCACCCCAGGCAGACACAACTGCCTATGTTCCCC...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR GCA 72 bp GTGTGTGTGGCCATTGTCATTTCTCCAAGGCTAGAATaGTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGG +
Preference number: 3 (lower is better)
Translates to: VCVAIVISPRLE*WGSCRLDWGLR
Trigger: CCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGAAATGACAATGGCCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CCA 72 bp TGTGTGGCCATTGTCATTTCTCCAAGGCTAGAATGCTaGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAG +
Preference number: 3 (lower is better)
Translates to: CVAIVISPRLEC*GSCRLDWGLRE
Trigger: CTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGAAATGACAATGGCCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAAGGGGAACATAGGCAGTaGTGTCTGCCTGGGGTGAGC +
Preference number: 3 (lower is better)
Translates to: RFVMHRREVFTCLRATCEGEHRQ*CLPGVS
Trigger: GCTCACCCCAGGCAGACACAACTGCCTATGTTCCCC...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 72 bp CATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTaGGCAGAAAGAGGATTACTTCTGTCCACAGGCCAC +
Preference number: 3 (lower is better)
Translates to: HRGNIGSCVCLG*AERGLLLSTGH
Trigger: GTGGCCTGTGGACAGAAGTAATCCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 72 bp GAGGCCAAAGCACCAAAGCTCGGTGGAGAAGGTTTGTaGTGCATAGGAGGGAGGTGTTCACGTGTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: EAKAPKLGGEGL*CIGGRCSRVSG
Trigger: CCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCTTCTCCACCGAGCTTTGGTGCTTTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR-3UTR CAA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGCCTTGGTGTCTAAATaGCCCTGCTGCTCTGGAACA +
Preference number: 3 (lower is better)
Translates to: SPLPMLVRCARGQSTKARALVSK*PCCSGT
Trigger: TGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR TCA 72 bp ATCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTaGCCCGCTCTCCACTGTGGTATAATCCTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: IKTETWTLHHVL*PALHCGIILEQ
Trigger: CTGCTCCAGGATTATACCACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CCA 72 bp GACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTaGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCA +
Preference number: 3 (lower is better)
Translates to: DPASCPVTRSPL*YNPGAVIFLLS
Trigger: TGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGGCCGCCTTGACGCGCTaGCGCACAGCCGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVAALTR*RTAATC
Trigger: GCAGGTGGCGGCTGTGCGGCAGCGCGTCAAGGCGGC...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGGCTGCCTCACCCGGCTaGCCGGGTGCTGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVAASPG*PGAGTF
Trigger: GAAGGTGCCAGCACCCGGGCAGCCGGGTGAGGCAGC...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGCTGGTGCCAGCCCGGTaGGCATGCAGGCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVLVPAR*ACRPPS
Trigger: AGACGGCGGCCTGCATGCCCACCGGGCTGGCACCAG...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCATGGCCACGAGCACGTaGGCGGGTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGMATST*AGGQGR
Trigger: CCTGCCCTGCCCACCCGCCCACGTGCTCGTGGCCAT...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCGGTCGTGCAGGGCCTaGAGGGTCTCACGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCRSCRA*RVSRLA
Trigger: CGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCGCCCAGCCCAATGCCTaGGTGGTCGGCCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCAQPNA*VVGLAL
Trigger: CAGGGCGAGGCCGACCACCCAGGCATTGGGCTGGGC...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGCTCGGCAGGGAGTTGTaGTGCCGTAGAGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVLGREL*CRRGRS
Trigger: GGACCGCCCTCTACGGCACCACAACTCCCTGCCGAG...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCCTCGGCAGGGAGTTGTaGTGCCGTAGAGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGLGREL*CRRGRS
Trigger: GGACCGCCCTCTACGGCACCACAACTCCCTGCCGAG...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCGGGCGCAGGCCAGGGTaGGCCATGGTGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCGRRPG*AMVVQQ
Trigger: CTGTTGCACCACCATGGCCCACCCTGGCCTGCGCCC...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCGTGGACAGGAGGGGCTaGGTTTGGGCCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGVDRRG*VWAHSH
Trigger: GTGGGAGTGGGCCCAAACCCAGCCCCTCCTGTCCAC...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCGGCAGAGCAGGGCTGTaGGCACCAGGCAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCGRAGL*APGSHP
Trigger: GGGATGACTGCCTGGTGCTCACAGCCCTGCTCTGCC...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCCTCGGGGGATCCCTTaGAGTCCAGGCCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCPRGIP*SPGPRP
Trigger: AGGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGCTGCCTCACCCGGCTaGCCGGGTGCTGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAAASPG*PGAGTF
Trigger: GAAGGTGCCAGCACCCGGGCAGCCGGGTGAGGCAGC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTACGGGCGAGTTCTGCTaGCTCTCGGCCCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVTGEFC*LSAPAR
Trigger: CCTGGCCGGGGCCGAGAGGCAGCAGAACTCGCCCGT...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTAGCTCTGCCCGCGGGTaGAGACGCCATGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVSSARG*RRHACR
Trigger: GCGGCAGGCATGGCGTCTGCACCCGCGGGCAGAGCT...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGACCATCTGTGCCTCCTaGTCTGGTGCCAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVTICAS*SGASPV
Trigger: CACCGGGCTGGCACCAGAGCAGGAGGCACAGATGGT...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCGGCTGCCCGGGTGCTaGCACCTTCATCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCRLPGC*HLHQPS
Trigger: GCTTGGCTGATGAAGGTGCCAGCACCCGGGCAGCCG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGGTCAGGCCCCCAGGGTaGAAGCTCACAGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVVRPPG*KLTALE
Trigger: CTCCAAGGCTGTGAGCTTCCACCCTGGGGGCCTGAC...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGCAGCCGAAGCTCCTGTaGGGCAGGTCAGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWQPKLL*GRSGHG
Trigger: CCCGTGACCTGACCTGCCCCACAGGAGCTTCGGCTG...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCTCTGAGCAGGGCAGCTaGGCAGGTGGGTACACAGCC +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGSEQGS*AGGYTA
Trigger: GGCTGTGTACCCACCTGCCCAGCTGCCCTGCTCAGA...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGCAGCTCCAGGGCCACTaGGGTCAGCACGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRQLQGH*GQHAAG
Trigger: GCCGGCGGCGTGCTGACCCCAGTGGCCCTGGAGCTG...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCCAGCTCCAGGGCCACTaGGGTCAGCACGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSQLQGH*GQHAAG
Trigger: GCCGGCGGCGTGCTGACCCCAGTGGCCCTGGAGCTG...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCCAGGGTGGGCCATGGTaGTGCAACAGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGQGGPW*CNRCSW
Trigger: CCAGCTGCACCTGTTGCACCACCATGGCCCACCCTG...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGAGCACGTGGGCGGGTaGGCAGGGCAGGACGCAAGC +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVEHVGG*AGQDAS
Trigger: GCTTGCGTCCTGCCCTGCCCACCCGCCCACGTGCTC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGGGCAACAGGGTAGCTaGGCCCATCGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWGQQGS*AHRCPG
Trigger: GCCTGGGCATCGATGGGCCCAGCTACCCTGTTGCCC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGGGACACAAGGCACATaGCGCCCACCAGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWGTQGT*RPPDGH
Trigger: GTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGACGGGCGAGTTCTGCTaGCTCTCGGCCCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRTGEFC*LSAPAR
Trigger: CCTGGCCGGGGCCGAGAGGCAGCAGAACTCGCCCGT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGTGCTGGGCCAGCAACTaGCTTGTCAGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWCWASN*LVSSRS
Trigger: GGACCGGCTGCTGACAAGGCAGTTGCTGGCCCAGCA...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCACAGCCACACCACCCTaGTGGGCCAGCAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGTATPP*WASNCL
Trigger: AAGGCAGTTGCTGGCCCAGCAGGGTGGTGTGGCTGT...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATTGCAGACGCCATGCCTaGCGCCCCCGCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYCRRHA*RPRQRQ
Trigger: CTGGCGCTGGCGGGGGCGGCAGGCATGGCGTCTGCA...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTCAGGGAAGCAGCCTGTaGGCGGCAGGCCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAQGSSL*AAGQSP
Trigger: GGGGCTCTGGCCTGCCGCCCACAGGCTGCTTCCCTG...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGTCAGGCCCCCAGGGTaGAAGCTCACAGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWVRPPG*KLTALE
Trigger: CTCCAAGGCTGTGAGCTTCCACCCTGGGGGCCTGAC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGCCGTAGCCCTAGGCTaGCATCCCCTCCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAAVALG*HPLPAA
Trigger: TGCTGCGGGGAGGGGATGCCAGCCTAGGGCTACGGC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTCCGACCGCCGAAGCATaGTCTCCACCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAPTAEA*SPPAAP
Trigger: CGGCGCCGCTGGTGGAGACCATGCTTCGGCGGTCGG...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGGCAGACCTAGCTCCTaGCAGAGCAGGGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWGRPSS*QSRAVS
Trigger: GCTCACAGCCCTGCTCTGCCAGGAGCTAGGTCTGCC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCAGGGCCTGCAGGTGCTaGGACACAAGGCACATGACG +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGRACRC*DTRHMT
Trigger: CGTCATGTGCCTTGTGTCCCAGCACCTGCAGGCCCT...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGTCTCACGGCTGGCGGTaGAACTCAGGGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWSHGWR*NSGPAG
Trigger: ACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGA...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAGGGCCTCGGTGGGGCTaGGTCCGGCACAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELGPRWG*VRHRPH
Trigger: GTGTGGCCTGTGCCGGACCCAGCCCCACCGAGGCCC...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTGCAGCGGGCCAGGCTaGGGCTGGGGCATGGTGATG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQACSGPG*GWGMVM
Trigger: CATCACCATGCCCCAGCCCCAGCCTGGCCCGCTGCA...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCTCCCACCTGGGGAGCTaGCGTCAGAGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGSHLGS*RQRCVC
Trigger: ACACACACACCTCTGACGCCAGCTCCCCAGGTGGGA...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGAGGGCAAGAGGCCCTTaGGTCCAGGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWRARGP*VQDALV
Trigger: CACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCT...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCCCCCAGGACAGCCTGTaGGGGGCACCTGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTPQDSL*GAPGRG
Trigger: ACCGCGGCCAGGTGCCCCGCACAGGCTGTCCTGGGG...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATGTCACGGGCGAGTTCTaGTGCCTCTCGGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYVTGEF*CLSAPA
Trigger: GGCCGGGGCCGAGAGGCAGCAGAACTCGCCCGTGAC...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGGTGAAAGCCAGGGTTaGTGGCACAGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWGESQG*WHSHTT
Trigger: GGTGGTGTGGCTGTGCCAGCAACCCTGGCTTTCACC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGAGCTCTGCCCGCGGGTaGAGACGCCATGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARSSARG*RRHACR
Trigger: GCGGCAGGCATGGCGTCTGCACCCGCGGGCAGAGCT...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGCGCCGCACACCACCTTaGTCAGCAGTGGCCTATCAC +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWRRTPP*SAVAYH
Trigger: GTGATAGGCCACTGCTGAGCAAGGTGGTGTGCGGCG...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCGGCAGGGAGTTGTGGTaGCGTAGAGGGCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSGRELW*RRGRSP
Trigger: CGGGGACCGCCCTCTACGGCACCACAACTCCCTGCC...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCGCCGCCTTGACGCGCTaGCGCACAGCCGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTAALTR*RTAATC
Trigger: GCAGGTGGCGGCTGTGCGGCAGCGCGTCAAGGCGGC...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGCCCAGCCCAGCCCAATaGCTGGGTGGTCGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARPSPAQ*LGGRPR
Trigger: GCGAGGCCGACCACCCAGGCATTGGGCTGGGCTGGG...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCGGTCGTGCAGGGCCTaGAGGGTCTCACGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYRSCRA*RVSRLA
Trigger: CGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCG...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGGGCAGCTGGGCAGGTaGGTACACAGCCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAGQLGR*VHSLHQ
Trigger: CTGGTGGAGGCTGTGTACCCACCTGCCCAGCTGCCC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCCACCTTGCTCAGCAGTaGCCTATCACCCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGHLAQQ*PITLCP
Trigger: CGGACACAGGGTGATAGGCCACTGCTGAGCAAGGTG...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGCCCAGCCCAATGCCTaGGTGGTCGGCCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARAQPNA*VVGLAL
Trigger: CAGGGCGAGGCCGACCACCCAGGCATTGGGCTGGGC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTATGACGCCCACCAGATaGCCACGAGCACGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAMTPTR*PRARGR
Trigger: CCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCAT...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCACACGAACTTCTTGCTaGCGCCGCCAGCGCCGACCA +
Preference number: 4 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLTRTSC*RRQRRP
Trigger: TGGTCGGCGCTGGCGGCGTCAGCAAGAAGTTCGTGT...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCAAAGTGGTTGGGGTCTaGCTCCACGAGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCKVVGV*LHEVQL
Trigger: CAGCTGCACCTCGTGGAGTCAGACCCCAACCACTTT...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCGAACTCCAGCTTCATaGCACCTGGCAGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCRTPAS*HLAGVP
Trigger: AGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTAGGGCCACTTGTGAATaGGGGCAGGGAGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQARATCE*GQGGEG
Trigger: CCCCTCACCTCCCTGCCCTCATTCACAAGTGGCCCT...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCACCCGGCTGCCCGGGTaGTGGCACCTTCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSTRLPG*WHLHQP
Trigger: TGGCTGATGAAGGTGCCAGCACCCGGGCAGCCGGGT...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCTGCAGACGCCATGCCTaGCGCCCCCGCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGCRRHA*RPRQRQ
Trigger: CTGGCGCTGGCGGGGGCGGCAGGCATGGCGTCTGCA...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCTGGCAGCTGGGGAGCTaGAGGGCAGACCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLWQLGS*RADLAP
Trigger: AGGAGCTAGGTCTGCCCTGCAGCTCCCCAGCTGCCA...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGACACCCACTGCACCTaGCCCGAACTCCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWDTHCT*PELQLH
Trigger: ATGAAGCTGGAGTTCGGGGCAGGTGCAGTGGGTGTC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTTGCCTCCTGCTCTGGTaGCAGCCCGGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQACLLLW*QPGGHA
Trigger: TGCATGCCCACCGGGCTGGCACCAGAGCAGGAGGCA...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTGTCCACAGGCCACCTaGCTCTACCGGTCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQACPQAT*LYRSGR
Trigger: TCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGCAGGGAAGCAGCCTGTaGGCGGCAGGCCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVQGSSL*AAGQSP
Trigger: GGGGCTCTGGCCTGCCGCCCACAGGCTGCTTCCCTG...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTATGTTTCCCGGGCTCTaGACCCCACCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVMFPGL*TPPSSS
Trigger: GCTGCTGGAGGGTGGGGTCCAGAGCCCGGGAAACAT...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGCCGTAGCCCTAGGCTaGCATCCCCTCCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARAVALG*HPLPAA
Trigger: TGCTGCGGGGAGGGGATGCCAGCCTAGGGCTACGGC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCTTCACCAGCGTCTCCTaGCCCTCTTTGCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCFTSVS*PSLPLS
Trigger: GCTGAGTGGCAAAGAGGGCCAGGAGACGCTGGTGAA...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGCCGACCGCCGAAGCATaGTCTCCACCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVPTAEA*SPPAAP
Trigger: CGGCGCCGCTGGTGGAGACCATGCTTCGGCGGTCGG...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCAGCTTCATGACACCTaGCAGGGGTACCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCQLHDT*QGYLVH
Trigger: GTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCAGCCCAATGCCTGGGTaGTCGGCCTCGCCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSSPMPG*SASPCK
Trigger: CTTGCAGGGCGAGGCCGACCACCCAGGCATTGGGCT...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCATGGCCACGAGCACGTaGGCGGGTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTMATST*AGGQGR
Trigger: CCTGCCCTGCCCACCCGCCCACGTGCTCGTGGCCAT...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGGCAGGGTCTCACGGCTaGCGGTGGAACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRAGSHG*RWNSGP
Trigger: AGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGC...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGGGCCTCGGTGGGGCTaGGTCCGGCACAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIGPRWG*VRHRPH
Trigger: GTGTGGCCTGTGCCGGACCCAGCCCCACCGAGGCCC...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATTGCAGCGGGCCAGGCTaGGGCTGGGGCATGGTGATG +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYCSGPG*GWGMVM
Trigger: CATCACCATGCCCCAGCCCCAGCCTGGCCCGCTGCA...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGGTGGACAGGAGGGGCTaGGTTTGGGCCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRVDRRG*VWAHSH
Trigger: GTGGGAGTGGGCCCAAACCCAGCCCCTCCTGTCCAC...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCCCGGCGGCTTGTAGGTaGAAGCCAGGGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSPAACR*KPGLLA
Trigger: TGCCAGCAACCCTGGCTTTCACCTACAAGCCGCCGG...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCACACGAACTTCTTGCTaGCGCCGCCAGCGCCGACCA +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSTRTSC*RRQRRP
Trigger: TGGTCGGCGCTGGCGGCGTCAGCAAGAAGTTCGTGT...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCAGGGCCACTTGTGAATaGGGGCAGGGAGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSRATCE*GQGGEG
Trigger: CCCCTCACCTCCCTGCCCTCATTCACAAGTGGCCCT...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTACCTCGGGGGATCCCTTaGAGTCCAGGCCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELPRGIP*SPGPRP
Trigger: AGGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGG...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGGAAGGCCAGCTTGCTaGAGACAGCTCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAGRPAC*RQLCRR
Trigger: CCTCCTGCAGAGCTGTCTGCAGCAAGCTGGCCTTCC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGGTGAAAGCCAGGGTTaGTGGCACAGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAGESQG*WHSHTT
Trigger: GGTGGTGTGGCTGTGCCAGCAACCCTGGCTTTCACC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTACACTGTGTCCACCACTaGACCCAGCTCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELHCVHH*TQLCPR
Trigger: CCGCGGGCAGAGCTGGGTGCAGTGGTGGACACAGTG...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGCACTGTGTCCACCACTaGACCCAGCTCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARHCVHH*TQLCPR
Trigger: CCGCGGGCAGAGCTGGGTGCAGTGGTGGACACAGTG...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTAGCCCGCACCAACTCTaGCAGCAGCCGTGCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQASPHQL*QQPCVL
Trigger: GAGAACGCACGGCTGCTGGCAGAGTTGGTGCGGGCT...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTGGCAGCTGGGGAGCTaGAGGGCAGACCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSWQLGS*RADLAP
Trigger: AGGAGCTAGGTCTGCCCTGCAGCTCCCCAGCTGCCA...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTGGCAGGGGTACCTGGTaGACGGCCCTCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAGRGTW*TALSTS
Trigger: TGATGTGGAGAGGGCCGTGCACCAGGTACCCCTGCC...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTCAGCCGGACACCCACTaGACCTGCCCCGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGQPDTH*TCPELQ
Trigger: CTGGAGTTCGGGGCAGGTGCAGTGGGTGTCCGGCTG...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGGTAATCCGGGAAAAGTaGTCATGGCACTGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVVIREK*SWHCGA
Trigger: TGCGCCACAGTGCCATGAGCACTTTTCCCGGATTAC...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGTGGTCGGCCTCGCCCTaGAAGTCTCGGGTAATCCGG +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRWSASP*KSRVIR
Trigger: CCGGATTACCCGAGACTTGCAGGGCGAGGCCGACCA...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCCAGCCCAGCCCAATaGCTGGGTGGTCGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGPSPAQ*LGGRPR
Trigger: GCGAGGCCGACCACCCAGGCATTGGGCTGGGCTGGG...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTACCATCTGTGCCTCCTaGTCTGGTGCCAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQATICAS*SGASPV
Trigger: CACCGGGCTGGCACCAGAGCAGGAGGCACAGATGGT...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTCTCAGGGCCTGCAGGTaGTGGGACACAAGGCACATG +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVLRACR*WDTRHM
Trigger: CATGTGCCTTGTGTCCCAGCACCTGCAGGCCCTGAG...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGAGCAGTCCACGGTCGTaGAGGGCCTGCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRSSPRS*RACRVS
Trigger: TGAGACCCTGCAGGCCCTGCACGACCGTGGACTGCT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTCTTCCTCCAGGTCCTTaGAGCCCAGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQALPPGP*SPVGNP
Trigger: GGGATTGCCCACTGGGCTCCAAGGACCTGGAGGAAG...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCATGTTTCCCGGGCTCTaGACCCCACCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSMFPGL*TPPSSS
Trigger: GCTGCTGGAGGGTGGGGTCCAGAGCCCGGGAAACAT...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTCGGCTGCCCGGGTGCTaGCACCTTCATCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGRLPGC*HLHQPS
Trigger: GCTTGGCTGATGAAGGTGCCAGCACCCGGGCAGCCG...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCAGCCGAAGCTCCTGTaGGGCAGGTCAGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYQPKLL*GRSGHG
Trigger: CCCGTGACCTGACCTGCCCCACAGGAGCTTCGGCTG...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGTCTGAGCAGGGCAGCTaGGCAGGTGGGTACACAGCC +
Preference number: 4 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRSEQGS*AGGYTA
Trigger: GGCTGTGTACCCACCTGCCCAGCTGCCCTGCTCAGA...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAGGCCAGGGTGGGCCATaGTGGTGCAACAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELGQGGP*WCNRCS
Trigger: GCTGCACCTGTTGCACCACCATGGCCCACCCTGGCC...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGTGCTCATGGCACTGTaGCGCATCCTCTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVVLMAL*RILYQP
Trigger: CGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCAC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCGGGAAAAGTGCTCATaGCACTGTGGCGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCREKCS*HCGASS
Trigger: AGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGAGCACGTGGGCGGGTaGGCAGGGCAGGACGCAAGC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIEHVGG*AGQDAS
Trigger: GCTTGCGTCCTGCCCTGCCCACCCGCCCACGTGCTC...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGGGCAACAGGGTAGCTaGGCCCATCGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARGQQGS*AHRCPG
Trigger: GCCTGGGCATCGATGGGCCCAGCTACCCTGTTGCCC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCTCCCACCTGGGGAGCTaGCGTCAGAGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLSHLGS*RQRCVC
Trigger: ACACACACACCTCTGACGCCAGCTCCCCAGGTGGGA...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGCCGAATGAGGCAGGTTaGATGCCACCAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVPNEAG*MPPSFQ
Trigger: CTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGG...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCGCAGTTGTGTCTGCCTaGGGTGAGCAGAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PRLECWGSCRLDWGLREGAVVSA*GEQKED
Trigger: ATCCTCTTTCTGCTCACCCCAGGCAGACACAACTGC...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAAACCTGGCCGCGGTCCTaGGTCTCCGGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RFVMHRREVFTCLRATCETWPRS*VSGRPA
Trigger: AGCTGGCCTTCCGGAGACTCAGGACCGCGGCCAGGT...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCTGTTTTCCCTCCATaGGGCAGCGCGCCGACCGCC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIAVFPP*GSAPTA
Trigger: GGCGGTCGGCGCGCTGCCTCATGGAGGGAAAACAGC...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCGCTGTTTTCCCTCCATaGGGCAGCGCGCCGACCGCC +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGAVFPP*GSAPTA
Trigger: GGCGGTCGGCGCGCTGCCTCATGGAGGGAAAACAGC...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGCAGCGGAAGGCTGCCTaGACCATCTGTGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARQRKAA*TICASC
Trigger: GCAGGAGGCACAGATGGTTCAGGCAGCCTTCCGCTG...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTGGGACACAAGGCACATaGCGCCCACCAGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGGTQGT*RPPDGH
Trigger: GTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCC...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATACCGGTCAGGCCGAATaGGGCAGGTTGGATGCCACC +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYTGQAE*GRLDAT
Trigger: GGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGT...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGACCCGGCTGCCCGGGTaGTGGCACCTTCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVTRLPG*WHLHQP
Trigger: TGGCTGATGAAGGTGCCAGCACCCGGGCAGCCGGGT...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGCCCCAGGCCCAGGCCTaGCAAAAAGTAGGTGGCACG +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARPQAQA*QKVGGT
Trigger: CGTGCCACCTACTTTTTGGCAGGCCTGGGCCTGGGG...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTCGCCGCACACCACCTTaGTCAGCAGTGGCCTATCAC +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQARRTPP*SAVAYH
Trigger: GTGATAGGCCACTGCTGAGCAAGGTGGTGTGCGGCG...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCTCCTCATCCCTCCGGTaGTCTGTCATGTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCSSSLR*SVMSKW
Trigger: CCACTTTGACATGACAGAGCACCGGAGGGATGAGGA...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAAGCCCGCACCAACTCTaGCAGCAGCCGTGCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELSPHQL*QQPCVL
Trigger: GAGAACGCACGGCTGCTGGCAGAGTTGGTGCGGGCT...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCTGGTGGTGCAACAGGTaGAGCTGGGTGAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLWWCNR*SWVRLF
Trigger: GAAGAGCCTCACCCAGCTGCACCTGTTGCACCACCA...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTGGCAGGGGTACCTGGTaGACGGCCCTCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGGRGTW*TALSTS
Trigger: TGATGTGGAGAGGGCCGTGCACCAGGTACCCCTGCC...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCCAGCCGGACACCCACTaGACCTGCCCCGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTQPDTH*TCPELQ
Trigger: CTGGAGTTCGGGGCAGGTGCAGTGGGTGTCCGGCTG...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATGGTCGGCCTCGCCCTaGAAGTCTCGGGTAATCCGG +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELWSASP*KSRVIR
Trigger: CCGGATTACCCGAGACTTGCAGGGCGAGGCCGACCA...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTTCAGCAGCATGGCATTaGCCCAGCCCAGCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQASAAWH*PSPAQC
Trigger: GCATTGGGCTGGGCTGGGGCAATGCCATGCTGCTGA...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTCCACGTCGTGCTCGGTaGCCTCCACAAACTCCATCA +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVPRRAR*PPQTPS
Trigger: TGATGGAGTTTGTGGAGGGCACCGAGCACGACGTGG...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCTGCCTCCTGCTCTGGTaGCAGCCCGGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTCLLLW*QPGGHA
Trigger: TGCATGCCCACCGGGCTGGCACCAGAGCAGGAGGCA...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGCAACAGCGGAAGGCTaGCTGAACCATCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAATAEG*LNHLCL
Trigger: GAGGCACAGATGGTTCAGGCAGCCTTCCGCTGTTGC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTCTCAGGGCCTGCAGGTaGTGGGACACAAGGCACATG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQALRACR*WDTRHM
Trigger: CATGTGCCTTGTGTCCCAGCACCTGCAGGCCCTGAG...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTAGCAGTCCACGGTCGTaGAGGGCCTGCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGSSPRS*RACRVS
Trigger: TGAGACCCTGCAGGCCCTGCACGACCGTGGACTGCT...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGTCTAAATTGCCCTGCTaGTCTGGAACAGACCTAGGC +
Preference number: 4 (lower is better)
Translates to: GPLPPGELASEVCVCVCVSKLPC*SGTDLG
Trigger: GCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGCCACTCGGGACCCGATaGATCCAGGGAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVPLGTR*IQGELA
Trigger: CGCCAGCTCTCCCTGGATCCATCGGGTCCCGAGTGG...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307823.7
CDS-3UTR CCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATGTCCTTGGAGCCCAGTaGGCAATCCCACTCGGGACC +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYVLGAQ*AIPLGT
Trigger: GGTCCCGAGTGGGATTGCCCACTGGGCTCCAAGGAC...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCTCCAGGCCCACGTCCTaGCGCCAGGAGCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGSRPTS*RQEPGK
Trigger: CTTCCCTGGCTCCTGGCGCCAGGACGTGGGCCTGGA...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTAGGGCCTGCAGGTGCTaGGACACAAGGCACATGACG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQARACRC*DTRHMT
Trigger: CGTCATGTGCCTTGTGTCCCAGCACCTGCAGGCCCT...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATTCTCACGGCTGGCGGTaGAACTCAGGGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYSHGWR*NSGPAG
Trigger: ACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGA...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGATTTGTCCAAGGCTTaGGGCCCAGCCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVDLSKA*GPARSS
Trigger: AGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGCCGAATGAGGCAGGTTaGATGCCACCAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWPNEAG*MPPSFQ
Trigger: CTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGG...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCCCGGCGGCTTGTAGGTaGAAGCCAGGGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTPAACR*KPGLLA
Trigger: TGCCAGCAACCCTGGCTTTCACCTACAAGCCGCCGG...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGCAGCGGAAGGCTGCCTaGACCATCTGTGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVQRKAA*TICASC
Trigger: GCAGGAGGCACAGATGGTTCAGGCAGCCTTCCGCTG...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTCCTCCTCCAGCAGATTaGGGCGTAGCAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGPPPAD*GVAVHG
Trigger: ACCGTGGACTGCTACGCCTCAATCTGCTGGAGGAGG...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTTGCTTCCCTGCCCCCTaGCCCCAGTGCTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQACFPAP*PQCYLK
Trigger: CTTCAAATAGCACTGGGGTCAGGGGGCAGGGAAGCA...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAGTCACGGGCGAGTTCTaGTGCCTCTCGGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVVTGEF*CLSAPA
Trigger: GGCCGGGGCCGAGAGGCAGCAGAACTCGCCCGTGAC...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTTGGGTGAGGCTCTTCTaGTTAGCCAGGCGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAWVRLF*LARRMA
Trigger: TGCCATGCGCCTGGCTAAGCAGAAGAGCCTCACCCA...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGTCAGCAGCATGGCATTaGCCCAGCCCAGCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARSAAWH*PSPAQC
Trigger: GCATTGGGCTGGGCTGGGGCAATGCCATGCTGCTGA...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTACCAGGTCCACGTCGTaGTCGGTGCCCTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGTRSTS*SVPSTN
Trigger: GTTTGTGGAGGGCACCGAGCACGACGTGGACCTGGT...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAGTGGAACTCAGGGCCTaGAGGTGCTGGGACACAAGG +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELVELRA*RCWDTR
Trigger: CCTTGTGTCCCAGCACCTGCAGGCCCTGAGTTCCAC...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGAACAGACCTAGGCATTaGAGCGGGCCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVNRPRH*SGPGWG
Trigger: GCCCCAGCCTGGCCCGCTGCAATGCCTAGGTCTGTT...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGGTCCTTGGAGCCCAGTaGGCAATCCCACTCGGGACC +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVVLGAQ*AIPLGT
Trigger: GGTCCCGAGTGGGATTGCCCACTGGGCTCCAAGGAC...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGGGATGCAAAGTGGTTaGGGTCTGACTCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAGMQSG*GLTPRG
Trigger: ACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGGCCAGGGTGGGCCATaGTGGTGCAACAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIGQGGP*WCNRCS
Trigger: GCTGCACCTGTTGCACCACCATGGCCCACCCTGGCC...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTGTGCTCATGGCACTGTaGCGCATCCTCTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGVLMAL*RILYQP
Trigger: CGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCAC...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTACTCCATCAGCAGCATaGCATTGCCCCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGTPSAA*HCPSPA
Trigger: GGCTGGGCTGGGGCAATGCCATGCTGCTGATGGAGT...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCATGACGCCCACCAGATaGCCACGAGCACGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGMTPTR*PRARGR
Trigger: CCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCAT...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCGATTTGTCCAAGGCTTaGGGCCCAGCCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSDLSKA*GPARSS
Trigger: AGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATC...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCAGGGAGAGCATCTCGTaGGTGGAGTGGCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSRESIS*VEWLRD
Trigger: GTCTCTCAGCCACTCCACCCACGAGATGCTCTCCCT...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445895.2
CDS-3UTR TCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAACCTGGCCGCGGTCCTaGGTCTCCGGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVTWPRS*VSGRPA
Trigger: AGCTGGCCTTCCGGAGACTCAGGACCGCGGCCAGGT...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCGCCAGCGCCAGCCACTaGGCTTCACAGCTACCTGCA +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGASASH*ASQLPA
Trigger: TGCAGGTAGCTGTGAAGCTCAGTGGCTGGCGCTGGC...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATAAAGTGGTTGGGGTCTaGCTCCACGAGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYKVVGV*LHEVQL
Trigger: CAGCTGCACCTCGTGGAGTCAGACCCCAACCACTTT...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGTCATGTCAAAGTGGATaGAGGTCTGTACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWSCQSG*RSVPTG
Trigger: CCCAGTTGGTACAGACCTTCATCCACTTTGACATGA...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCTCATGTCAAAGTGGATaGAGGTCTGTACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCSCQSG*RSVPTG
Trigger: CCCAGTTGGTACAGACCTTCATCCACTTTGACATGA...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCAGTGCTATTTGAAGTaGGACAGGAAGTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCQCYLK*DRKWAT
Trigger: TGTTGCCCACTTCCTGTCTCACTTCAAATAGCACTG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTTGCTTCCCTGCCCCCTaGCCCCAGTGCTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGCFPAP*PQCYLK
Trigger: CTTCAAATAGCACTGGGGTCAGGGGGCAGGGAAGCA...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGAGGGCAAGAGGCCCTTaGGTCCAGGATGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVRARGP*VQDALV
Trigger: CACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCT...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTACCGGTCAGGCCGAATaGGGCAGGTTGGATGCCACC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGITGQAE*GRLDAT
Trigger: GGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGT...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGTGGAGAAGGTTTGTaGTGCATAGGAGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVGGEGL*CIGGRC
Trigger: ACACCTCCCTCCTATGCATCACAAACCTTCTCCACC...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCAGCATCTTCCCTGAATaGGGAAGAGAGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCSIFPE*GRECRL
Trigger: GAGTCTACACTCTCTTCCTCATTCAGGGAAGATGCT...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAACCCCAGGCCCAGGCCTaGCAAAAAGTAGGTGGCACG +
Preference number: 4 (lower is better)
Translates to: RFVMHRREVFTCLRATCEPQAQA*QKVGGT
Trigger: CGTGCCACCTACTTTTTGGCAGGCCTGGGCCTGGGG...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTTGCTGGGCCAGCAACTaGCTTGTCAGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGICWASN*LVSSRS
Trigger: GGACCGGCTGCTGACAAGGCAGTTGCTGGCCCAGCA...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGACAGCCACACCACCCTaGTGGGCCAGCAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVTATPP*WASNCL
Trigger: AAGGCAGTTGCTGGCCCAGCAGGGTGGTGTGGCTGT...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTTCCTCATCCCTCCGGTaGTCTGTCATGTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVSSSLR*SVMSKW
Trigger: CCACTTTGACATGACAGAGCACCGGAGGGATGAGGA...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCGGCACAGGCCACACTaGAGTAGGGCTCCTCATACT +
Preference number: 4 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYRHRPH*SRAPHT
Trigger: AGTATGAGGAGCCCTACTGCAGTGTGGCCTGTGCCG...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCAACAGACCTAGGCATTaGAGCGGGCCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGNRPRH*SGPGWG
Trigger: GCCCCAGCCTGGCCCGCTGCAATGCCTAGGTCTGTT...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCTCCAAGGCTAGAATaGTGGGGAAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQASPRLE*WGSCRL
Trigger: CAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGA...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCATGAGGCAGGTTGGATaGCACCAAGTTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLMRQVG*HQVSSR
Trigger: CCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCAT...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTATCCAGGCCCACGTCCTaGCGCCAGGAGCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVSRPTS*RQEPGK
Trigger: CTTCCCTGGCTCCTGGCGCCAGGACGTGGGCCTGGA...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAGGAAGCTCACAGCCTTaGAGACTAGCAGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELGSSQP*RLAGLP
Trigger: AGGCAGCCCTGCTAGTCTCCAAGGCTGTGAGCTTCC...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAAGGCAGACCTAGCTCCTaGCAGAGCAGGGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RFVMHRREVFTCLRATCEGRPSS*QSRAVS
Trigger: GCTCACAGCCCTGCTCTGCCAGGAGCTAGGTCTGCC...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCAGGGTGGGCCATGGTaGTGCAACAGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGQGGPW*CNRCSW
Trigger: CCAGCTGCACCTGTTGCACCACCATGGCCCACCCTG...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGCAGCTTCATGACACCTaGCAGGGGTACCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARQLHDT*QGYLVH
Trigger: GTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTG...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCGGTGGAGAAGGTTTGTaGTGCATAGGAGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSLRFSQDLSKAWGPARSGGEGL*CIGGRC
Trigger: ACACCTCCCTCCTATGCATCACAAACCTTCTCCACC...GGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGAGCTTCACAGCTACCTaGAGGATATCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARSFTAT*RISPRA
Trigger: GGCCCTGGGTGATATCCTGCAGGTAGCTGTGAAGCT...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGTGGTGGTGCAACAGGTaGAGCTGGGTGAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVWWCNR*SWVRLF
Trigger: GAAGAGCCTCACCCAGCTGCACCTGTTGCACCACCA...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGGACACCCACTGCACCTaGCCCGAACTCCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVDTHCT*PELQLH
Trigger: ATGAAGCTGGAGTTCGGGGCAGGTGCAGTGGGTGTC...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCGTGGAACTCAGGGCCTaGAGGTGCTGGGACACAAGG +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGVELRA*RCWDTR
Trigger: CCTTGTGTCCCAGCACCTGCAGGCCCTGAGTTCCAC...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTATGAGGCAGGTTGGATaGCACCAAGTTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAMRQVG*HQVSSR
Trigger: CCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCAT...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTAAGGTCTGTACCAACTaGGATGCAAAGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAKVCTN*DAKWLG
Trigger: CCCCAACCACTTTGCATCCCAGTTGGTACAGACCTT...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTTGCAACAGGTGCAGCTaGGTGAGGCTCTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQACNRCS*VRLFCL
Trigger: TAAGCAGAAGAGCCTCACCCAGCTGCACCTGTTGCA...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAGCAGGGTCTCACGGCTaGCGGTGGAACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVAGSHG*RWNSGP
Trigger: AGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGC...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
3UTR CAA 72 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTaGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQD*SKAWGPARSSP
Trigger: AGGAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGATGGCAGGAAGAGAGTaGGACCTGGAGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVMAGRE*DLERWT
Trigger: TGTCCACCTCTCCAGGTCTCACTCTCTTCCTGCCAT...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAGGCAGGGAGTTGTGGTaGCGTAGAGGGCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSGRELW*RRGRSP
Trigger: CGGGGACCGCCCTCTACGGCACCACAACTCCCTGCC...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTTGGGTGAGGCTCTTCTaGTTAGCCAGGCGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIWVRLF*LARRMA
Trigger: TGCCATGCGCCTGGCTAAGCAGAAGAGCCTCACCCA...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTGTGTCTAAATTGCCCTaGTGCTCTGGAACAGACCTA +
Preference number: 4 (lower is better)
Translates to: LPVRPNEAGWMPPSFQQAVSKLP*CSGTDL
Trigger: TAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACAC...AGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCTGACCGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTCCTTGGTGTCTAAATTaGCCTGCTGCTCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAPWCLN*PAALEQ
Trigger: CTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGG...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGGAAGCTCACAGCCTTaGAGACTAGCAGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIGSSQP*RLAGLP
Trigger: AGGCAGCCCTGCTAGTCTCCAAGGCTGTGAGCTTCC...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAACACCTTGCTCAGCAGTaGCCTATCACCCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: RFVMHRREVFTCLRATCEHLAQQ*PITLCP
Trigger: CGGACACAGGGTGATAGGCCACTGCTGAGCAAGGTG...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTAACTGGGATGCAAAGTaGTTGGGGTCTGACTCCACG +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGNWDAK*LGSDST
Trigger: CGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTT...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAGGGCGCAGGCCAGGGTaGGCCATGGTGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSGRRPG*AMVVQQ
Trigger: CTGTTGCACCACCATGGCCCACCCTGGCCTGCGCCC...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTATTGCCCTGCTGCTCTaGAACAGACCTAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGIALLL*NRPRHC
Trigger: GCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAAT...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAAGCAGCCATCTAGCTTaGGGCCGCGAGCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSSSHLA*GREPAP
Trigger: TGGTGCGGGCTCGCGGCCTCAAGCTAGATGGCTGCT...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTTGTGTCTGCCTGGGGTaGGCAGAAAGAGGATTACTT +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGCVCLG*AERGLL
Trigger: AAGTAATCCTCTTTCTGCTCACCCCAGGCAGACACA...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGGTAATCCGGGAAAAGTaGTCATGGCACTGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVVIREK*SWHCGA
Trigger: TGCGCCACAGTGCCATGAGCACTTTTCCCGGATTAC...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCTCTCCAAGGCTAGAATaGTGGGGAAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTSPRLE*WGSCRL
Trigger: CAGCCTACAGCTTCCCCAGCATTCTAGCCTTGGAGA...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAGGGCAGCTGGGCAGGTaGGTACACAGCCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSGQLGR*VHSLHQ
Trigger: CTGGTGGAGGCTGTGTACCCACCTGCCCAGCTGCCC...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGGGATGCAAAGTGGTTaGGGTCTGACTCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIGMQSG*GLTPRG
Trigger: ACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCC...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTAAGGTCTGTACCAACTaGGATGCAAAGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGKVCTN*DAKWLG
Trigger: CCCCAACCACTTTGCATCCCAGTTGGTACAGACCTT...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGTGCAACAGGTGCAGCTaGGTGAGGCTCTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVCNRCS*VRLFCL
Trigger: TAAGCAGAAGAGCCTCACCCAGCTGCACCTGTTGCA...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAAGCCCAATGCCTGGGTaGTCGGCCTCGCCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSSPMPG*SASPCK
Trigger: CTTGCAGGGCGAGGCCGACCACCCAGGCATTGGGCT...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGAGTCCAGGATGCCTTaGTGTCTAAATTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARESRMP*CLNCPA
Trigger: AGCAGGGCAATTTAGACACCAAGGCATCCTGGACTC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAGAGTCCAGGATGCCTTaGTGTCTAAATTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELESRMP*CLNCPA
Trigger: AGCAGGGCAATTTAGACACCAAGGCATCCTGGACTC...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTCCAAGGCTAGAATGCTaGGGAAGCTGTAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QDALVSKLPCCSGTDLGIPRLEC*GSCRLD
Trigger: GTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAAGGCTAGAATGCTaGGGAAGCTGTAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGPRLEC*GSCRLD
Trigger: GTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTACGAACTCCAGCTTCATaGCACCTGGCAGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVRTPAS*HLAGVP
Trigger: AGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCG...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGCAGTGCTATTTGAAGTaGGACAGGAAGTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARQCYLK*DRKWAT
Trigger: TGTTGCCCACTTCCTGTCTCACTTCAAATAGCACTG...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTTGGGCATGTAAGACTTaGTCAAAACAGAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVWACKT*SKQKPG
Trigger: TCCAGGTTTCTGTTTTGATCAAGTCTTACATGCCCA...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTACCACGTCGTGCTCGGTaGCCTCCACAAACTCCATCA +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVPRRAR*PPQTPS
Trigger: TGATGGAGTTTGTGGAGGGCACCGAGCACGACGTGG...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAGCAACAGCGGAAGGCTaGCTGAACCATCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVATAEG*LNHLCL
Trigger: GAGGCACAGATGGTTCAGGCAGCCTTCCGCTGTTGC...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTACGGCACAGGCCACACTaGAGTAGGGCTCCTCATACT +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVRHRPH*SRAPHT
Trigger: AGTATGAGGAGCCCTACTGCAGTGTGGCCTGTGCCG...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCATGTCCACAGGCCACCTaGCTCTACCGGTCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSCPQAT*LYRSGR
Trigger: TCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCCTCTCCTCTTGTAGATaGCAGGAAGAGAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTLSSCR*QEESET
Trigger: GGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAG...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAAGCACCAAAGCTCGGTaGAGAAGGTTTGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: RPNEAGWMPPSFQQASELSTKAR*RRFVMH
Trigger: ATGCATCACAAACCTTCTCCACCGAGCTTTGGTGCT...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCACCTCCTCCAGCAGATTaGGGCGTAGCAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSPPPAD*GVAVHG
Trigger: ACCGTGGACTGCTACGCCTCAATCTGCTGGAGGAGG...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAATGGCAGGAAGAGAGTaGGACCTGGAGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVMAGRE*DLERWT
Trigger: TGTCCACCTCTCCAGGTCTCACTCTCTTCCTGCCAT...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAGGAAGGCCAGCTTGCTaGAGACAGCTCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSGRPAC*RQLCRR
Trigger: CCTCCTGCAGAGCTGTCTGCAGCAAGCTGGCCTTCC...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAAGCTTCACAGCTACCTaGAGGATATCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVSFTAT*RISPRA
Trigger: GGCCCTGGGTGATATCCTGCAGGTAGCTGTGAAGCT...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCGTGTCTAAATTGCCCTaGTGCTCTGGAACAGACCTA +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTVSKLP*CSGTDL
Trigger: TAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACAC...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCACTTCCTCCAGGTCCTTaGAGCCCAGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSLPPGP*SPVGNP
Trigger: GGGATTGCCCACTGGGCTCCAAGGACCTGGAGGAAG...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAACTCCATCAGCAGCATaGCATTGCCCCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSTPSAA*HCPSPA
Trigger: GGCTGGGCTGGGGCAATGCCATGCTGCTGATGGAGT...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGGTGTGTGTGTGTGTGTaGCCATTGTCATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARVCVCV*PLSFLQ
Trigger: TTGGAGAAATGACAATGGCCACACACACACACACAC...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAGCACCAAAGCTCGGTaGAGAAGGTTTGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTSTKAR*RRFVMH
Trigger: ATGCATCACAAACCTTCTCCACCGAGCTTTGGTGCT...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCACCACTCGGGACCCGATaGATCCAGGGAGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSPLGTR*IQGEHL
Trigger: GAGATGCTCTCCCTGGATCCATCGGGTCCCGAGTGG...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445895.2
CDS-3UTR TCA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTTGGGCATGTAAGACTTaGTCAAAACAGAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: SQVLSSCRWQEESETWRGWACKT*SKQKPG
Trigger: TCCAGGTTTCTGTTTTGATCAAGTCTTACATGCCCA...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCAGCATCTTCCCTGAATaGGGAAGAGAGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGSIFPE*GRECRL
Trigger: GAGTCTACACTCTCTTCCTCATTCAGGGAAGATGCT...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCATTCACCAGCGTCTCCTaGCCCTCTTTGCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSFTSVS*PSLPLS
Trigger: GCTGAGTGGCAAAGAGGGCCAGGAGACGCTGGTGAA...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGTCTGTCATGTCAAAGTaGATGAAGGTCTGTACCAAC +
Preference number: 4 (lower is better)
Translates to: SPLPMLVRCARGQSTKARSVMSK*MKVCTN
Trigger: GTTGGTACAGACCTTCATCCACTTTGACATGACAGA...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGTGTAGACTCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCGTGTGTGTGTGTGTGTaGCCATTGTCATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SVDSPLPMLVRCARGQSTVCVCV*PLSFLQ
Trigger: TTGGAGAAATGACAATGGCCACACACACACACACAC...GGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGAGTCTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR GCA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTACCTTGGTGTCTAAATTaGCCTGCTGCTCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVPWCLN*PAALEQ
Trigger: CTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGG...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAAATCAAAACAGAAACCTaGACCCTGCATCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: RFVMHRREVFTCLRATCEIKTET*TLHHVL
Trigger: CAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGAT...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR TCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCATGTGTCTGCCTGGGGTaGGCAGAAAGAGGATTACTT +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSCVCLG*AERGLL
Trigger: AAGTAATCCTCTTTCTGCTCACCCCAGGCAGACACA...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCAATCAAAACAGAAACCTaGACCCTGCATCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSIKTET*TLHHVL
Trigger: CAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGAT...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CCA 90 bp CTGTGGTATAATCCTGGAGCAGTCATTTTTCTTCTCTCAGCCTGTTTCCTCTCATCTGTCATGTCAAAGTaGATGAAGGTCTGTACCAAC +
Preference number: 4 (lower is better)
Translates to: LWYNPGAVIFLLSACFLSSVMSK*MKVCTN
Trigger: GTTGGTACAGACCTTCATCCACTTTGACATGACAGA...TGAGAGGAAACAGGCTGAGAGAAGAAAAATGACTGCTCCAGGATTATACCACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS CCA 90 bp CGATGGATCCAGGGAGAGCTGGCGGCGGCAGCGGCTCGGCGGGCGTaGCGGGCGGACTCGGACCGGGCGGGATGCAGCGGCGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: RWIQGELAAAAARRA*RADSDRAGCSGGGG
Trigger: ACCGCCGCCGCCGCTGCATCCCGCCCGGTCCGAGTCCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGCTCTCCCTGGATCCATCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307823.7
CDS CCA 90 bp GGTGGAGTGGCTGAGAGACTGGCGGCGGCAGCGGCTCGGCGGGCGTaGCGGGCGGACTCGGACCGGGCGGGATGCAGCGGCGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: GGVAERLAAAAARRA*RADSDRAGCSGGGG
Trigger: ACCGCCGCCGCCGCTGCATCCCGCCCGGTCCGAGTCCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531040.5
ENST00000531958.5
CDS GCA 90 bp AAATCCACGCCCAGGAAGTCCGTGTGCGCCCGGCGCCCGCCGCGCTaGTCGGCACTCAGGCCGGCCTCCAGAGCCAGCACGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KSTPRKSVCARRPPR*SALRPASRASTAAS
Trigger: GCTGGCCGCCGTGCTGGCTCTGGAGGCCGGCCTGAGTGCCGAGCAGCGCGGCGGGCGCCGGGCGCACACGGACTTCCTGGGCGTGGATTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp CCCAGTGGGCAATCCCACTCGGGACCCGATGGATCCAGGGAGAGCTaGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGGCGGACTCGGACC +
Preference number: 5 (lower is better)
Translates to: PSGQSHSGPDGSRES*RRQRLGGRGGRTRT
Trigger: GGTCCGAGTCCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGCTCTCCCTGGATCCATCGGGTCCCGAGTGGGATTGCCCACTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307823.7
CDS CCA 90 bp GCCTCGGCCCCCTCGGGGGATCCCTTGCAGTCCAGGCCCACGTCCTaGCGCCAGGAGCCAGGGAAGCAGCCTGTGGGCGGCAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ASAPSGDPLQSRPTS*RQEPGKQPVGGRPE
Trigger: CTCTGGCCTGCCGCCCACAGGCTGCTTCCCTGGCTCCTGGCGCCAGGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGGGGGCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000529925.5
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS GCA 90 bp AGCGCCAGCACTGTGTCCACCACTGCACCCAGCTCTGCCCGCGGGTaGAGACGCCATGCCTGCCGCCCCCGCCAGCGCCAGCCACTGAGC +
Preference number: 5 (lower is better)
Translates to: SASTVSTTAPSSARG*RRHACRPRQRQPLS
Trigger: GCTCAGTGGCTGGCGCTGGCGGGGGCGGCAGGCATGGCGTCTGCACCCGCGGGCAGAGCTGGGTGCAGTGGTGGACACAGTGCTGGCGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp GCCGCACGCCTCCAGACACAGGCCGCCGTTCAGCTCCAGGGCCACTaGGGTCAGCACGCCGCCGGCCGCTGTCAGCGCGAAATCCACGCC +
Preference number: 5 (lower is better)
Translates to: AARLQTQAAVQLQGH*GQHAAGRCQREIHA
Trigger: GGCGTGGATTTCGCGCTGACAGCGGCCGGCGGCGTGCTGACCCCAGTGGCCCTGGAGCTGAACGGCGGCCTGTGTCTGGAGGCGTGCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS TCA 90 bp GGGGGAGGGACCACAGAAGACTCACCATCTCGTGGGTGGAGTGGCTaGGAGACTGGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGGCGGA +
Preference number: 5 (lower is better)
Translates to: GGGTTEDSPSRGWSG*ETGGGSGSAGVAGG
Trigger: TCCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCTTCTGTGGTCCCTCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS CCA 90 bp GGCCCTGGCAGAGGCCCAGCAGGCGGAGACGGGCCTCGGTGGGGCTaGGTCCGGCACAGGCCACACTGCAGTAGGGCTCCTCATACTCGC +
Preference number: 5 (lower is better)
Translates to: GPGRGPAGGDGPRWG*VRHRPHCSRAPHTR
Trigger: GCGAGTATGAGGAGCCCTACTGCAGTGTGGCCTGTGCCGGACCCAGCCCCACCGAGGCCCGTCTCCGCCTGCTGGGCCTCTGCCAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp GATGGATCCAGGGAGAGCATCTCGTGGGTGGAGTGGCTGAGAGACTaGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGGCGGACTCGGACC +
Preference number: 5 (lower is better)
Translates to: DGSRESISWVEWLRD*RRQRLGGRGGRTRT
Trigger: GGTCCGAGTCCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGCTCTCCCTGGATCCATC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531040.5
CDS GCA 90 bp AGTAGACAGTCCAAGCCCGGGCCTCGGCCCCCTCGGGGGATCCCTTaGAGTCCAGGCCCACGTCCTGGCGCCAGGAGCCAGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SRQSKPGPRPPRGIP*SPGPRPGARSQGSS
Trigger: GCTGCTTCCCTGGCTCCTGGCGCCAGGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGGGGGCCGAGGCCCGGGCTTGGACTGTCTACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000529925.5
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp GACCACAGAAGACTCACCATCTCGTGGGTGGAGTGGCTGAGAGACTaGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGGCGGACTCGGACC +
Preference number: 5 (lower is better)
Translates to: DHRRLTISWVEWLRD*RRQRLGGRGGRTRT
Trigger: GGTCCGAGTCCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCTTCTGTGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS TCA 90 bp ACCTCCGCCCCAGGACAGCCTGTGCGGGGCACCTGGCCGCGGTCCTaGGTCTCCGGAAGGCCAGCTTGCTGCAGACAGCTCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TSAPGQPVRGTWPRS*VSGRPACCRQLCRR
Trigger: CCTCCTGCAGAGCTGTCTGCAGCAAGCTGGCCTTCCGGAGACTCAGGACCGCGGCCAGGTGCCCCGCACAGGCTGTCCTGGGGCGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000529925.5
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp TTGTGGGGGAGGGACCACAGAAGACTCACCATCTCGTGGGTGGAGTaGCTGAGAGACTGGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: LWGRDHRRLTISWVE*LRDWRRQRLGGRGG
Trigger: CCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCTTCTGTGGTCCCTCCCCCACAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS TCA 90 bp TGGCGGTGGAACTCAGGGCCTGCAGGTGCTGGGACACAAGGCACATaGCGCCCACCAGATGGCCACGAGCACGTGGGCGGGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: WRWNSGPAGAGTQGT*RPPDGHEHVGGWAG
Trigger: CCCTGCCCACCCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCCAGCACCTGCAGGCCCTGAGTTCCACCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp AGGGCCTGCAGGTGCTGGGACACAAGGCACATGACGCCCACCAGATaGCCACGAGCACGTGGGCGGGTGGGCAGGGCAGGACGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: RACRCWDTRHMTPTR*PRARGRVGRAGRKP
Trigger: TGGCTTGCGTCCTGCCCTGCCCACCCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCCAGCACCTGCAGGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 90 bp CCCTCCCCGCAGCAGCCCCGGCGGCTTGTAGGTGAAAGCCAGGGTTaGTGGCACAGCCACACCACCCTGCTGGGCCAGCAACTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: PSPQQPRRLVGESQG*WHSHTTLLGQQLPC
Trigger: ACAAGGCAGTTGCTGGCCCAGCAGGGTGGTGTGGCTGTGCCAGCAACCCTGGCTTTCACCTACAAGCCGCCGGGGCTGCTGCGGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp GGCGTAGCAGTCCACGGTCGTGCAGGGCCTGCAGGGTCTCACGGCTaGCGGTGGAACTCAGGGCCTGCAGGTGCTGGGACACAAGGCACA +
Preference number: 5 (lower is better)
Translates to: GVAVHGRAGPAGSHG*RWNSGPAGAGTQGT
Trigger: TGTGCCTTGTGTCCCAGCACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCGTGGACTGCTACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp ACTTGGGCCTTGTGGGGGAGGGACCACAGAAGACTCACCATCTCGTaGGTGGAGTGGCTGAGAGACTGGCGGCGGCAGCGGCTCGGCGGG +
Preference number: 5 (lower is better)
Translates to: TWALWGRDHRRLTIS*VEWLRDWRRQRLGG
Trigger: CCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCTTCTGTGGTCCCTCCCCCACAAGGCCCAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS-3UTR CAA 90 bp CCAAGGCTAGAATGCTGGGGAAGCTGTAGGCTGGACTGGGGCCTTCGGGAGGGCCCCTCGGGGGATCCCTaGCAGTCCAGGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: PRLECWGSCRLDWGLREGPSGDP*QSRPTS
Trigger: GGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGGG...GCCCTCCCGAAGGCCCCAGTCCAGCCTACAGCTTCCCCAGCATTCTAGCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS GCA 90 bp TCCTCCAGCAGATTGAGGCGTAGCAGTCCACGGTCGTGCAGGGCCTaGAGGGTCTCACGGCTGGCGGTGGAACTCAGGGCCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SSSRLRRSSPRSCRA*RVSRLAVELRACRC
Trigger: GCACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCGTGGACTGCTACGCCTCAATCTGCTGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp CTGGGACACAAGGCACATGACGCCCACCAGATGGCCACGAGCACGTaGGCGGGTGGGCAGGGCAGGACGCAAGCCACAGGCCACCATAAC +
Preference number: 5 (lower is better)
Translates to: LGHKAHDAHQMATST*AGGQGRTQATGHHN
Trigger: GTTATGGTGGCCTGTGGCTTGCGTCCTGCCCTGCCCACCCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS-3UTR CAA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGCAGGAGGGGCTGGGTTaGGGCCCACTCCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWQEGLG*GPLPPG
Trigger: CCCAGGTGGGAGTGGGCCCAAACCCAGCCCCTCCTG...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS TCA 90 bp CCCAGTGGGCAATCCCACTCGGGACCCGATGGATCCAGGGAGAGCTaGGAGGGCAGAAGTGGTAGGTCTTGGGCAGGGTGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PSGQSHSGPDGSRES*EGRSGRSWAGWASG
Trigger: CCCACTGGCCCACCCTGCCCAAGACCTACCACTTCTGCCCTCTCAGCTCTCCCTGGATCCATCGGGTCCCGAGTGGGATTGCCCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 90 bp GGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACTGGGCCTCATaGCTGGGCTCGAATCCCAGTTTGCCAGGGCCAGAGCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: GRWCAVAQTAEDWAS*LGSNPSLPGPEPLC
Trigger: GCACAGAGGCTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp AGTCATCCAGGAATGTCAGGCCCCCAGGGTGGAAGCTCACAGCCTTaGAGACTAGCAGGGCTGCCTCACCCGGCTGCCCGGGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SHPGMSGPQGGSSQP*RLAGLPHPAARVLA
Trigger: TGCCAGCACCCGGGCAGCCGGGTGAGGCAGCCCTGCTAGTCTCCAAGGCTGTGAGCTTCCACCCTGGGGGCCTGACATTCCTGGATGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp GATGGTGTGCTGTGGCCCAGACGGCAGAGGACTGGGCCTCATGCCTaGGCTCGAATCCCAGTTTGCCAGGGCCAGAGCCTCTGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: DGVLWPRRQRTGPHA*ARIPVCQGQSLCAV
Trigger: GACGGCACAGAGGCTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS TCA 90 bp CTACCAGCCGGACACCCACTGCACCTGCCCCGAACTCCAGCTTCATaGCACCTGGCAGGGGTACCTGGTGCACGGCCCTCTCCACATCAG +
Preference number: 5 (lower is better)
Translates to: LPAGHPLHLPRTPAS*HLAGVPGARPSPHQ
Trigger: CTGATGTGGAGAGGGCCGTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGCAGTGGGTGTCCGGCTGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 90 bp GCATTGCCCCAGCCCAGCCCAATGCCTGGGTGGTCGGCCTCGCCCTaGAAGTCTCGGGTAATCCGGGAAAAGTGCTCATGGCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: ALPQPSPMPGWSASP*KSRVIREKCSWHCG
Trigger: GCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGGCGAGGCCGACCACCCAGGCATTGGGCTGGGCTGGGGCAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 90 bp CCAGCCCTGCAGCTTTCTGTCCCAGCTGCCAGCGCTTTGCCCTATTaGACGTTCTCCCAGAGAGGCCCTCCTGGGCCAGGGTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: PALQLSVPAASALPY*TFSQRGPPGPGSPH
Trigger: GTGTGGAGACCCTGGCCCAGGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCAGCTGGGACAGAAAGCTGCAGGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS GCA 90 bp TGGATGGAGGCCGGAGGTCCCAGCCCTGCAGCTTTCTGTCCCAGCTaGCAGCGCTTTGCCCTATTGCACGTTCTCCCAGAGAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: WMEAGGPSPAAFCPS*QRFALLHVLPERPS
Trigger: GGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCAGCTGGGACAGAAAGCTGCAGGGCTGGGACCTCCGGCCTCCATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS CCA 90 bp GCACCTGCCCCGAACTCCAGCTTCATGACACCTGGCAGGGGTACCTaGTGCACGGCCCTCTCCACATCAGCCTCACTCTCCAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: APAPNSSFMTPGRGT*CTALSTSASLSSGQ
Trigger: CTGCCCACTGGAGAGTGAGGCTGATGTGGAGAGGGCCGTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS-3UTR CAA 90 bp CTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGGGGCCAGCAACTGCCTaGTCAGCAGCCGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LLSTGHLPLPVRPNEAGWGPATA*SAAGPP
Trigger: TGGAGGACCGGCTGCTGACAAGGCAGTTGCTGGCCC...CCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGGCCTCCTCCAGCAGATaGAGGCGTAGCAGTCCACGG +
Preference number: 5 (lower is better)
Translates to: GPLPPGELASEVCVCVCVASSSR*RRSSPR
Trigger: CCGTGGACTGCTACGCCTCAATCTGCTGGAGGAGGC...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp TACTTCTGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTCAGGAGGGGCTGGGTTaGGGCCCACTCCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: YFCPQATCLYRSGRMRQVQEGLG*GPLPPG
Trigger: CCCAGGTGGGAGTGGGCCCAAACCCAGCCCCTCCTG...AACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACAGAAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS GCA 90 bp GTGCTCATGGCACTGTGGCGCATCCTCTACCAGCCGGACACCCACTaGACCTGCCCCGAACTCCAGCTTCATGACACCTGGCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: VLMALWRILYQPDTH*TCPELQLHDTWQGY
Trigger: GTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGCAGTGGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 90 bp GGGTGGTCGGCCTCGCCCTGCAAGTCTCGGGTAATCCGGGAAAAGTaGTCATGGCACTGTGGCGCATCCTCTACCAGCCGGACACCCACT +
Preference number: 5 (lower is better)
Translates to: GWSASPCKSRVIREK*SWHCGASSTSRTPT
Trigger: AGTGGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGGCGAGGCCGACCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 90 bp GTTCTCCCAGAGAGGCCCTCCTGGGCCAGGGTCTCCACACATCTGTaGAGCCCCCTCCTCACTTCTGGACCCAGTGGACTTGCACACAGG +
Preference number: 5 (lower is better)
Translates to: VLPERPSWARVSTHL*SPLLTSGPSGLAHR
Trigger: CCTGTGTGCAAGTCCACTGGGTCCAGAAGTGAGGAGGGGGCTGCACAGATGTGTGGAGACCCTGGCCCAGGAGGGCCTCTCTGGGAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS GCA 90 bp CCAGCCAGGTCCTTTCCTCTTTCACCAGCGTCTCCTGGCCCTCTTTaGCACTCAGCTCCACCAGCCGTAGCCCTAGGCTGGCATCCCCTC +
Preference number: 5 (lower is better)
Translates to: PARSFPLSPASPGPL*HSAPPAVALGWHPL
Trigger: GAGGGGATGCCAGCCTAGGGCTACGGCTGGTGGAGCTGAGTGGCAAAGAGGGCCAGGAGACGCTGGTGAAAGAGGAAAGGACCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS-3UTR CAA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCCCACCCATGCGGGGGTaGATCTCGATAAGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCPPMRG*ISISRG
Trigger: GCCTCGGCTTATCGAGATCAACCCCCGCATGGGTGG...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS TCA 90 bp CTGGGGAGCTGCAGGGCAGACCTAGCTCCTGGCAGAGCAGGGCTGTaGGCACCAGGCAGTCATCCCAGTAGGAGAAGCAGCCATCTAGCT +
Preference number: 5 (lower is better)
Translates to: LGSCRADLAPGRAGL*APGSHPSRRSSHLA
Trigger: AGCTAGATGGCTGCTTCTCCTACTGGGATGACTGCCTGGTGCTCACAGCCCTGCTCTGCCAGGAGCTAGGTCTGCCCTGCAGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp GCCCTGCAAGTCTCGGGTAATCCGGGAAAAGTGCTCATGGCACTGTaGCGCATCCTCTACCAGCCGGACACCCACTGCACCTGCCCCGAA +
Preference number: 5 (lower is better)
Translates to: ALQVSGNPGKVLMAL*RILYQPDTHCTCPE
Trigger: TTCGGGGCAGGTGCAGTGGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp TCGGCCTCGCCCTGCAAGTCTCGGGTAATCCGGGAAAAGTGCTCATaGCACTGTGGCGCATCCTCTACCAGCCGGACACCCACTGCACCT +
Preference number: 5 (lower is better)
Translates to: SASPCKSRVIREKCS*HCGASSTSRTPTAP
Trigger: AGGTGCAGTGGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGGCGAGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp TGCCAGCGCTTTGCCCTATTGCACGTTCTCCCAGAGAGGCCCTCCTaGGCCAGGGTCTCCACACATCTGTGCAGCCCCCTCCTCACTTCT +
Preference number: 5 (lower is better)
Translates to: CQRFALLHVLPERPS*ARVSTHLCSPLLTS
Trigger: AGAAGTGAGGAGGGGGCTGCACAGATGTGTGGAGACCCTGGCCCAGGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS CCA 90 bp TTGGTTGTTGGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACTaGGCCTCATGCCTGGGCTCGAATCCCAGTTTGCCAGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LVVGRWCAVAQTAED*ASCLGSNPSLPGPE
Trigger: CTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp CCCTGGGGGCTGATGAGGCTGGGACGAAGAGAATCTCTTGGTTGTTaGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PWGLMRLGRRESLGC*EMVCCGPDGRGLGL
Trigger: GAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAGCCCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS-3UTR CAA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTACCCTCGGGGGATCCCTaGCAGTCCAGGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: RPNEAGWMPPSFQQASELPSGDP*QSRPTS
Trigger: GGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGGG...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS TCA 90 bp GAGTCTGTCCTCCAGGGGACAGGCTCGGCCACCTTGAGCAAGTCGTaGGGTCTCTTTGGACCTTGTTGCCTGGTGCCTGCCCTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: ESVLQGTGSATLSKS*GLFGPCCLVPALSH
Trigger: ATGGGAGAGGGCAGGCACCAGGCAACAAGGTCCAAAGAGACCTCACGACTTGCTCAAGGTGGCCGAGCCTGTCCCCTGGAGGACAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 90 bp AAGGCAGCCAGCAACCGCCCACCAAACAACACCAGGTCCACGTCGTaGTCGGTGCCCTCCACAAACTCCATCAGCAGCATGGCATTGCCC +
Preference number: 5 (lower is better)
Translates to: KAASNRPPNNTRSTS*SVPSTNSISSMALP
Trigger: GGGCAATGCCATGCTGCTGATGGAGTTTGTGGAGGGCACCGAGCACGACGTGGACCTGGTGTTGTTTGGTGGGCGGTTGCTGGCTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS-3UTR CAA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCCTCCGGAAGGCCAGCTaGCTGCAGACAGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLLRKAS*LQTALQ
Trigger: CTGCAGAGCTGTCTGCAGCAAGCTGGCCTTCCGGAG...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGGGGCCAGCAACTGCCTaGTCAGCAGCCGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRGPATA*SAAGPP
Trigger: TGGAGGACCGGCTGCTGACAAGGCAGTTGCTGGCCC...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp CTCTCATCGGGGGAACATAGGCAGTTGTGTCTGCCTGGGGTGAGCAGAAAGAGGAAGCAGCCATCTAGCTaGAGGCCGCGAGCCCGCACC +
Preference number: 5 (lower is better)
Translates to: LSSGEHRQLCLPGVSRKRKQPSS*RPRART
Trigger: GGTGCGGGCTCGCGGCCTCAAGCTAGATGGCTGCTT...CCTCTTTCTGCTCACCCCAGGCAGACACAACTGCCTATGTTCCCCCGATGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS GCA 90 bp TCATGCCTGGGCTCGAATCCCAGTTTGCCAGGGCCAGAGCCTCTGTaGCGTCTCCTAGAAGGTGAGCTCCCTGAGGGGCCATGGAATGAA +
Preference number: 5 (lower is better)
Translates to: SCLGSNPSLPGPEPL*RLLEGELPEGPWNE
Trigger: TTCATTCCATGGCCCCTCAGGGAGCTCACCTTCTAGGAGACGGCACAGAGGCTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 90 bp ATGAGGCTGGGACGAAGAGAATCTCTTGGTTGTTGGGAGATGGTGTaGTGTGGCCCAGACGGCAGAGGACTGGGCCTCATGCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: MRLGRRESLGCWEMV*CGPDGRGLGLMPGL
Trigger: GAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp GCTGGGACGAAGAGAATCTCTTGGTTGTTGGGAGATGGTGTGCTGTaGCCCAGACGGCAGAGGACTGGGCCTCATGCCTGGGCTCGAATC +
Preference number: 5 (lower is better)
Translates to: AGTKRISWLLGDGVL*PRRQRTGPHAWARI
Trigger: GATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp TCCCATCCCCTGGGGGCTGATGAGGCTGGGACGAAGAGAATCTCTTaGTTGTTGGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACT +
Preference number: 5 (lower is better)
Translates to: SHPLGADEAGTKRIS*LLGDGVLWPRRQRT
Trigger: AGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAGCCCCCAGGGGATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS-3UTR CAA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGTCCCACACGAACTTCTaGCTGACGCCGCCAGCGCCG +
Preference number: 5 (lower is better)
Translates to: SPLPMLVRCARGQSTKARSHTNF*LTPPAP
Trigger: CGGCGCTGGCGGCGTCAGCAAGAAGTTCGTGTGGGA...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGAAGCAGCCATCTAGCTaGAGGCCGCGAGCCCGCACC +
Preference number: 5 (lower is better)
Translates to: SPLPMLVRCARGQSTKARKQPSS*RPRART
Trigger: GGTGCGGGCTCGCGGCCTCAAGCTAGATGGCTGCTT...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCGAGGGCAAGAGGCCCTaGAGTCCAGGATGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLEGKRP*SPGCLG
Trigger: ACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCTC...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCCCAGCCAGGTCCTCTCGGGGAACATAGGCAGTaGTGTCTGCCTGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VSGFPRICPRLGAQPGPLGEHRQ*CLPGVS
Trigger: GCTCACCCCAGGCAGACACAACTGCCTATGTTCCCC...GAGAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS CCA 90 bp GTCTCTTTGGACCTTGTTGCCTGGTGCCTGCCCTCTCCCATCCCCTaGGGGCTGATGAGGCTGGGACGAAGAGAATCTCTTGGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VSLDLVAWCLPSPIP*GLMRLGRRESLGCW
Trigger: CCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAGCCCCCAGGGGATGGGAGAGGGCAGGCACCAGGCAACAAGGTCCAAAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 90 bp AGGCTTCGTGTGAATGGAATTCTTGTTCTTTGCAGTCCCCAGGCCTaGACAGGCCTGGCAGCTGAGTCTGTCCTCCAGGGGACAGGCTCG +
Preference number: 5 (lower is better)
Translates to: RLRVNGILVLCSPQA*TGLAAESVLQGTGS
Trigger: CGAGCCTGTCCCCTGGAGGACAGACTCAGCTGCCAGGCCTGTCCAGGCCTGGGGACTGCAAAGAACAAGAATTCCATTCACACGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS-3UTR CAA 90 bp TGTCCACAGGCCACCTGCCTCTACCGGTCAGGCCGAATGAGGCAGGTTGGATGCAGCTTGAGCTCCACGTaGAAGACTCCATCGAGCAAC +
Preference number: 5 (lower is better)
Translates to: CPQATCLYRSGRMRQVGCSLSST*KTPSSN
Trigger: GTTGCTCGATGGAGTCTTCAACGTGGAGCTCAAGCT...GCATCCAACCTGCCTCATTCGGCCTGACCGGTAGAGGCAGGTGGCCTGTGGACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTCCACCCATGCGGGGGTaGATCTCGATAAGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: SQVLSSCRWQEESETWRGPPMRG*ISISRG
Trigger: GCCTCGGCTTATCGAGATCAACCCCCGCATGGGTGG...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GGCCCACTCCCACCTGGGGAGCTGGCGTCAGAGGTGTGTGTGTGTGTGTGTGTGTACATAAGCCTTTATTaGGGGAGGGATGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GPLPPGELASEVCVCVCVYISLY*GRDAWG
Trigger: TCCCCAGGCATCCCTCCCCAAATAAAGGCTTATGTA...CACACACACACACACACACACCTCTGACGCCAGCTCCCCAGGTGGGAGTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS TCA 90 bp TGCCGTCTCCTAGAAGGTGAGCTCCCTGAGGGGCCATGGAATGAATaGATGTCACAGGGCACTAAGAGTGCCCACCTCCCAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: CRLLEGELPEGPWNE*MSQGTKSAHLPGCS
Trigger: GCTGCATCCTGGGAGGTGGGCACTCTTAGTGCCCTGTGACATTCATTCATTCCATGGCCCCTCAGGGAGCTCACCTTCTAGGAGACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 90 bp TATGGGGCTGCTGGGAGGCTTCGTGTGAATGGAATTCTTGTTCTTTaGAGTCCCCAGGCCTGGACAGGCCTGGCAGCTGAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: YGAAGRLRVNGILVL*SPQAWTGLAAESVL
Trigger: GAGGACAGACTCAGCTGCCAGGCCTGTCCAGGCCTGGGGACTGCAAAGAACAAGAATTCCATTCACACGAAGCCTCCCAGCAGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS-3UTR CAA 90 bp AGCCAGGTCCTCTCCTCTTGTAGATGGCAGGAAGAGAGTGAGACCTGGAGAGGTTCTTCCTCCAGGTCCTaGGAGCCCAGTGGGCAATCC +
Preference number: 5 (lower is better)
Translates to: SQVLSSCRWQEESETWRGSSSRS*EPSGQS
Trigger: GGATTGCCCACTGGGCTCCAAGGACCTGGAGGAAGA...ACCTCTCCAGGTCTCACTCTCTTCCTGCCATCTACAAGAGGAGAGGACCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAACGCCGCACACCACCTaGCTCAGCAGTGGCCTATCA +
Preference number: 5 (lower is better)
Translates to: RPNEAGWMPPSFQQASELTPHTT*LSSGLS
Trigger: TGATAGGCCACTGCTGAGCAAGGTGGTGTGCGGCGT...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTTCCCACACGAACTTCTaGCTGACGCCGCCAGCGCCG +
Preference number: 5 (lower is better)
Translates to: QDALVSKLPCCSGTDLGISHTNF*LTPPAP
Trigger: CGGCGCTGGCGGCGTCAGCAAGAAGTTCGTGTGGGA...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCAGCCCCGGTCAGCTaGAGCTCCACGTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYPAPVS*SSTLKT
Trigger: AGTCTTCAACGTGGAGCTCAAGCTGACCGGGGCTGG...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS GCA 90 bp CGCACCAACTCTGCCAGCAGCCGTGCGTTCTCCTCATCCCTCCGGTaGTCTGTCATGTCAAAGTGGATGAAGGTCTGTACCAACTGGGAT +
Preference number: 5 (lower is better)
Translates to: RTNSASSRAFSSSLR*SVMSKWMKVCTNWD
Trigger: ATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAGGGATGAGGAGAACGCACGGCTGCTGGCAGAGTTGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 90 bp TCTTCAGAGACACAGAGGAAGTCCCGACAGAGGGCCAGGTACAGATaGACAGGGACTGTCGTCGAGGGTCACAGACGTAGGGCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SSETQRKSRQRARYR*TGTVVEGHRRRALD
Trigger: ATCCAAAGCCCTACGTCTGTGACCCTCGACGACAGTCCCTGTCCATCTGTACCTGGCCCTCTGTCGGGACTTCCTCTGTGTCTCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS-3UTR CAA 90 bp AGGTTTGTGATGCATAGGAGGGAGGTGTTCACGTGTCTCAGGGCCACTTGTGAAGCCTCCTCCAGCAGATaGAGGCGTAGCAGTCCACGG +
Preference number: 5 (lower is better)
Translates to: RFVMHRREVFTCLRATCEASSSR*RRSSPR
Trigger: CCGTGGACTGCTACGCCTCAATCTGCTGGAGGAGGC...TTCACAAGTGGCCCTGAGACACGTGAACACCTCCCTCCTATGCATCACAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS CCA 90 bp CTCCGGTGCTCTGTCATGTCAAAGTGGATGAAGGTCTGTACCAACTaGGATGCAAAGTGGTTGGGGTCTGACTCCACGAGGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRCSVMSKWMKVCTN*DAKWLGSDSTRCSW
Trigger: CCAGCTGCACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS-3UTR CAA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTTCTTCCTCCAGGTCCTaGGAGCCCAGTGGGCAATCC +
Preference number: 5 (lower is better)
Translates to: QDALVSKLPCCSGTDLGISSSRS*EPSGQS
Trigger: GGATTGCCCACTGGGCTCCAAGGACCTGGAGGAAGA...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp CAGGATGCCTTGGTGTCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTACGCCGCACACCACCTaGCTCAGCAGTGGCCTATCA +
Preference number: 5 (lower is better)
Translates to: QDALVSKLPCCSGTDLGITPHTT*LSSGLS
Trigger: TGATAGGCCACTGCTGAGCAAGGTGGTGTGCGGCGT...AATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp TCAAAACAGAAACCTGGACCCTGCATCATGTCCTGTGACCCGCTCTCCACTGTGTGGGATGCAAAGTGGTaGGGGTCTGACTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: SKQKPGPCIMSCDPLSTVWDAKW*GSDSTR
Trigger: CCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCA...CACAGTGGAGAGCGGGTCACAGGACATGATGCAGGGTCCAGGTTTCTGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp TCTCCTCTGCCAATGCTAGTTAGGTGTGCCAGAGGCCAAAGCACCAAAGCTCGGAGGTTTTCCCAGGATTaGTCCAAGGCTTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SPLPMLVRCARGQSTKARRFSQD*SKAWGP
Trigger: TGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCT...CCGAGCTTTGGTGCTTTGGCCTCTGGCACACCTAACTAGCATTGGCAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATAGGTTTTCCCAGGATTaGTCCAAGGCTTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GRMRQVGCHQVSSRLQSYRFSQD*SKAWGP
Trigger: TGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCT...ATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCGGGGAACATAGGCAGTaGTGTCTGCCTGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGGEHRQ*CLPGVS
Trigger: GCTCACCCCAGGCAGACACAACTGCCTATGTTCCCC...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS CCA 90 bp AGCCGTGCGTTCTCCTCATCCCTCCGGTGCTCTGTCATGTCAAAGTaGATGAAGGTCTGTACCAACTGGGATGCAAAGTGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SRAFSSSLRCSVMSK*MKVCTNWDAKWLGS
Trigger: AGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAGGGATGAGGAGAACGCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS-3UTR CAA 90 bp AGGCCGAATGAGGCAGGTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTAGCCTTGGTGTCTAAATaGCCCTGCTGCTCTGGAACA +
Preference number: 5 (lower is better)
Translates to: RPNEAGWMPPSFQQASELALVSK*PCCSGT
Trigger: TGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGC...TAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAACCTGCCTCATTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp TCTAAATTGCCCTGCTGCTCTGGAACAGACCTAGGCATTGCAGCGGGCCAGGCTTACATAAGCCTTTATTaGGGGAGGGATGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SKLPCCSGTDLGIAAGQAYISLY*GRDAWG
Trigger: TCCCCAGGCATCCCTCCCCAAATAAAGGCTTATGTA...AGCCTGGCCCGCTGCAATGCCTAGGTCTGTTCCAGAGCAGCAGGGCAATTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS TCA 90 bp GTGCGTTCTCCTCATCCCTCCGGTGCTCTGTCATGTCAAAGTGGATaGAGGTCTGTACCAACTGGGATGCAAAGTGGTTGGGGTCTGACT +
Preference number: 5 (lower is better)
Translates to: VRSPHPSGALSCQSG*RSVPTGMQSGWGLT
Trigger: AGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAGGGATGAGGAGAACGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS-3UTR CAA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTACCAGCCCCGGTCAGCTaGAGCTCCACGTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVPAPVS*SSTLKT
Trigger: AGTCTTCAACGTGGAGCTCAAGCTGACCGGGGCTGG...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTAGAGGGCAAGAGGCCCTaGAGTCCAGGATGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVEGKRP*SPGCLG
Trigger: ACCAAGGCATCCTGGACTCAAGGGCCTCTTGCCCTC...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GTTGGATGCCACCAAGTTTCCAGCAGGCTTCAGAGCTATCCTAGAATTTGGGTATGGGATGCAAAGTGGTaGGGGTCTGACTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: VGCHQVSSRLQSYPRIWVWDAKW*GSDSTR
Trigger: CCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCA...TACCCAAATTCTAGGATAGCTCTGAAGCCTGCTGGAAACTTGGTGGCATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS-3UTR CAA 90 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTTGTCCAAGGCTTGGGGCGCCTTGGTGTCTAAATaGCCCTGCTGCTCTGGAACA +
Preference number: 5 (lower is better)
Translates to: EDKGSSLRFSQDLSKAWGALVSK*PCCSGT
Trigger: TGTTCCAGAGCAGCAGGGCAATTTAGACACCAAGGC...GCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307823.7
ENST00000445895.2
CDS GCA 72 bp CCCAGGAAGTCCGTGTGCGCCCGGCGCCCGCCGCGCTaGTCGGCACTCAGGCCGGCCTCCAGAGCCAGCACG +
Preference number: 6 (lower is better)
Translates to: PRKSVCARRPPR*SALRPASRAST
Trigger: CGTGCTGGCTCTGGAGGCCGGCCTGAGTGCCGAGCAGCGCGGCGGGCGCCGGGCGCACACGGACTTCCTGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GCCAGCGCGGCCTCCAGCGTCCTCGGCAGGGAGTTGTaGTGCCGTAGAGGGCGGTCCCCGCGGCCCACGCCG +
Preference number: 6 (lower is better)
Translates to: ASAASSVLGREL*CRRGRSPRPTP
Trigger: CGGCGTGGGCCGCGGGGACCGCCCTCTACGGCACCACAACTCCCTGCCGAGGACGCTGGAGGCCGCGCTGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531040.5
CDS GCA 72 bp AGCGCGGCCTCCAGCGTCCTCGGCAGGGAGTTGTGGTaGCGTAGAGGGCGGTCCCCGCGGCCCACGCCGCAC +
Preference number: 6 (lower is better)
Translates to: SAASSVLGRELW*RRGRSPRPTPH
Trigger: GTGCGGCGTGGGCCGCGGGGACCGCCCTCTACGGCACCACAACTCCCTGCCGAGGACGCTGGAGGCCGCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531040.5
CDS CCA 72 bp CAATCCCACTCGGGACCCGATGGATCCAGGGAGAGCTaGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: QSHSGPDGSRES*RRQRLGGRGGR
Trigger: CCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGCTCTCCCTGGATCCATCGGGTCCCGAGTGGGATTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307823.7
CDS GCA 72 bp TCCAAGCCCGGGCCTCGGCCCCCTCGGGGGATCCCTTaGAGTCCAGGCCCACGTCCTGGCGCCAGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: SKPGPRPPRGIP*SPGPRPGARSQ
Trigger: CTGGCTCCTGGCGCCAGGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGGGGGCCGAGGCCCGGGCTTGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000529925.5
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS CAA 72 bp GTCCAAGCCCGGGCCTCGGCCCCCTCGGGGGATCCCTaGCAGTCCAGGCCCACGTCCTGGCGCCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: VQARASAPSGDP*QSRPTSWRQEP
Trigger: TGGCTCCTGGCGCCAGGACGTGGGCCTGGACTGCAAGGGATCCCCCGAGGGGGCCGAGGCCCGGGCTTGGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000529925.5
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS GCA 72 bp ACTGTGTCCACCACTGCACCCAGCTCTGCCCGCGGGTaGAGACGCCATGCCTGCCGCCCCCGCCAGCGCCAG +
Preference number: 6 (lower is better)
Translates to: TVSTTAPSSARG*RRHACRPRQRQ
Trigger: CTGGCGCTGGCGGGGGCGGCAGGCATGGCGTCTGCACCCGCGGGCAGAGCTGGGTGCAGTGGTGGACACAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp CCTGGCAGAGGCCCAGCAGGCGGAGACGGGCCTCGGTaGGGCTGGGTCCGGCACAGGCCACACTGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: PGRGPAGGDGPR*GWVRHRPHCSR
Trigger: CCTACTGCAGTGTGGCCTGTGCCGGACCCAGCCCCACCGAGGCCCGTCTCCGCCTGCTGGGCCTCTGCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp AGACTCACCATCTCGTGGGTGGAGTGGCTGAGAGACTaGCGGCGGCAGCGGCTCGGCGGGCGTGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: RLTISWVEWLRD*RRQRLGGRGGR
Trigger: CCGCCCGCCACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS CCA 72 bp CTCCAGACACAGGCCGCCGTTCAGCTCCAGGGCCACTaGGGTCAGCACGCCGCCGGCCGCTGTCAGCGCGAA +
Preference number: 6 (lower is better)
Translates to: LQTQAAVQLQGH*GQHAAGRCQRE
Trigger: TTCGCGCTGACAGCGGCCGGCGGCGTGCTGACCCCAGTGGCCCTGGAGCTGAACGGCGGCCTGTGTCTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp AGAGGCCCAGCAGGCGGAGACGGGCCTCGGTGGGGCTaGGTCCGGCACAGGCCACACTGCAGTAGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: RGPAGGDGPRWG*VRHRPHCSRAP
Trigger: AGGAGCCCTACTGCAGTGTGGCCTGTGCCGGACCCAGCCCCACCGAGGCCCGTCTCCGCCTGCTGGGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp GGGCCTCGGTGGGGCTGGGTCCGGCACAGGCCACACTaGAGTAGGGCTCCTCATACTCGCCAGGCACCAGGG +
Preference number: 6 (lower is better)
Translates to: GPRWGWVRHRPH*SRAPHTRQAPG
Trigger: CCCTGGTGCCTGGCGAGTATGAGGAGCCCTACTGCAGTGTGGCCTGTGCCGGACCCAGCCCCACCGAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp CCCGATGGATCCAGGGAGAGCATCTCGTGGGTGGAGTaGCTGAGAGACTGGCGGCGGCAGCGGCTCGGCGGG +
Preference number: 6 (lower is better)
Translates to: PDGSRESISWVE*LRDWRRQRLGG
Trigger: CCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGCTCTCCCTGGATCCATCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531040.5
CDS TCA 72 bp CCAGGACAGCCTGTGCGGGGCACCTGGCCGCGGTCCTaGGTCTCCGGAAGGCCAGCTTGCTGCAGACAGCTC +
Preference number: 6 (lower is better)
Translates to: PGQPVRGTWPRS*VSGRPACCRQL
Trigger: GAGCTGTCTGCAGCAAGCTGGCCTTCCGGAGACTCAGGACCGCGGCCAGGTGCCCCGCACAGGCTGTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000529925.5
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS TCA 72 bp ATGGATCCAGGGAGAGCATCTCGTGGGTGGAGTGGCTaGGAGACTGGCGGCGGCAGCGGCTCGGCGGGCGTG +
Preference number: 6 (lower is better)
Translates to: MDPGRASRGWSG*ETGGGSGSAGV
Trigger: CACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGCTCTCCCTGGATCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531040.5
CDS CCA 72 bp AAGGCACATGACGCCCACCAGATGGCCACGAGCACGTaGGCGGGTGGGCAGGGCAGGACGCAAGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: KAHDAHQMATST*AGGQGRTQATG
Trigger: GCCTGTGGCTTGCGTCCTGCCCTGCCCACCCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCATGTGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GGTCGTGCAGGGCCTGCAGGGTCTCACGGCTGGCGGTaGAACTCAGGGCCTGCAGGTGCTGGGACACAAGGC +
Preference number: 6 (lower is better)
Translates to: GRAGPAGSHGWR*NSGPAGAGTQG
Trigger: GCCTTGTGTCCCAGCACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GTCCACGGTCGTGCAGGGCCTGCAGGGTCTCACGGCTaGCGGTGGAACTCAGGGCCTGCAGGTGCTGGGACA +
Preference number: 6 (lower is better)
Translates to: VHGRAGPAGSHG*RWNSGPAGAGT
Trigger: TGTCCCAGCACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCGTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS TCA 72 bp GACGCCATGCCTGCCGCCCCCGCCAGCGCCAGCCACTaGGCTTCACAGCTACCTGCAGGATATCACCCAGGG +
Preference number: 6 (lower is better)
Translates to: DAMPAAPASASH*ASQLPAGYHPG
Trigger: CCCTGGGTGATATCCTGCAGGTAGCTGTGAAGCTCAGTGGCTGGCGCTGGCGGGGGCGGCAGGCATGGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS TCA 72 bp CGCCAGCGCCGACCACCAGCAGCTGTTTTCCCTCCATaGGGCAGCGCGCCGACCGCCGAAGCATGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: RQRRPPAAVFPP*GSAPTAEAWSP
Trigger: TGGAGACCATGCTTCGGCGGTCGGCGCGCTGCCTCATGGAGGGAAAACAGCTGCTGGTGGTCGGCGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS TCA 72 bp ACCACAGAAGACTCACCATCTCGTGGGTGGAGTGGCTaGGAGACTGGCGGCGGCAGCGGCTCGGCGGGCGTG +
Preference number: 6 (lower is better)
Translates to: TTEDSPSRGWSG*ETGGGSGSAGV
Trigger: CACGCCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCTTCTGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS CCA 72 bp GGAATGTCAGGCCCCCAGGGTGGAAGCTCACAGCCTTaGAGACTAGCAGGGCTGCCTCACCCGGCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: GMSGPQGGSSQP*RLAGLPHPAAR
Trigger: CCGGGCAGCCGGGTGAGGCAGCCCTGCTAGTCTCCAAGGCTGTGAGCTTCCACCCTGGGGGCCTGACATTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp AGGGACCACAGAAGACTCACCATCTCGTGGGTGGAGTaGCTGAGAGACTGGCGGCGGCAGCGGCTCGGCGGG +
Preference number: 6 (lower is better)
Translates to: RDHRRLTISWVE*LRDWRRQRLGG
Trigger: CCCGCCGAGCCGCTGCCGCCGCCAGTCTCTCAGCCACTCCACCCACGAGATGGTGAGTCTTCTGTGGTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS TCA 72 bp CGTAGTCGCGCGCCGCCTCCCACACGAACTTCTTGCTaGCGCCGCCAGCGCCGACCACCAGCAGCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: RSRAPPPTRTSC*RRQRRPPAAVF
Trigger: GAAAACAGCTGCTGGTGGTCGGCGCTGGCGGCGTCAGCAAGAAGTTCGTGTGGGAGGCGGCGCGCGACTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS TCA 72 bp AACTCAGGGCCTGCAGGTGCTGGGACACAAGGCACATaGCGCCCACCAGATGGCCACGAGCACGTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: NSGPAGAGTQGT*RPPDGHEHVGG
Trigger: CCCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCCAGCACCTGCAGGCCCTGAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp CTGTGGCCCAGACGGCAGAGGACTGGGCCTCATGCCTaGGCTCGAATCCCAGTTTGCCAGGGCCAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: LWPRRQRTGPHA*ARIPVCQGQSL
Trigger: GAGGCTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 72 bp TGGCGCATCCTCTACCAGCCGGACACCCACTGCACCTaGCCCGAACTCCAGCTTCATGACACCTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: WRILYQPDTHCT*PELQLHDTWQG
Trigger: CCCCTGCCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGCAGTGGGTGTCCGGCTGGTAGAGGATGCGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp GTCTCACGGCTGGCGGTGGAACTCAGGGCCTGCAGGTaGTGGGACACAAGGCACATGACGCCCACCAGATGG +
Preference number: 6 (lower is better)
Translates to: VSRLAVELRACR*WDTRHMTPTRW
Trigger: CCATCTGGTGGGCGTCATGTGCCTTGTGTCCCAGCACCTGCAGGCCCTGAGTTCCACCGCCAGCCGTGAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp TCCTCCAGCAGATTGAGGCGTAGCAGTCCACGGTCGTaGAGGGCCTGCAGGGTCTCACGGCTGGCGGTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSRLRRSSPRS*RACRVSRLAVE
Trigger: TTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCGTGGACTGCTACGCCTCAATCTGCTGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp ATGGCAGCTGGGGAGCTGCAGGGCAGACCTAGCTCCTaGCAGAGCAGGGCTGTGAGCACCAGGCAGTCATCC +
Preference number: 6 (lower is better)
Translates to: MAAGELQGRPSS*QSRAVSTRQSS
Trigger: GGATGACTGCCTGGTGCTCACAGCCCTGCTCTGCCAGGAGCTAGGTCTGCCCTGCAGCTCCCCAGCTGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp CTGCTGTCCTCTGGGCCCACTCTCTGCCCAGGGACTTaGGCCTTGTGGGGGAGGGACCACAGAAGACTCACC +
Preference number: 6 (lower is better)
Translates to: LLSSGPTLCPGT*ALWGRDHRRLT
Trigger: GGTGAGTCTTCTGTGGTCCCTCCCCCACAAGGCCCAAGTCCCTGGGCAGAGAGTGGGCCCAGAGGACAGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 90 bp CCCAGCCCTGCAGCTTTCTGTCCCAGCTGCCAGCGCTTTGCCCTATaGCACGTTCTCCCAGAGAGGCCCTCCTGGGCCAGGGTCTCCACA +
Preference number: 6 (lower is better)
Translates to: PSPAAFCPSCQRFAL*HVLPERPSWARVST
Trigger: TGTGGAGACCCTGGCCCAGGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCAGCTGGGACAGAAAGCTGCAGGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS GCA 72 bp GCACTGTGGCGCATCCTCTACCAGCCGGACACCCACTaGACCTGCCCCGAACTCCAGCTTCATGACACCTGG +
Preference number: 6 (lower is better)
Translates to: ALWRILYQPDTH*TCPELQLHDTW
Trigger: CCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGCAGTGGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp CAGCCCAGCCCAATGCCTGGGTGGTCGGCCTCGCCCTaGAAGTCTCGGGTAATCCGGGAAAAGTGCTCATGG +
Preference number: 6 (lower is better)
Translates to: QPSPMPGWSASP*KSRVIREKCSW
Trigger: CCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGGCGAGGCCGACCACCCAGGCATTGGGCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp CAGCTTTCTGTCCCAGCTGCCAGCGCTTTGCCCTATTaGACGTTCTCCCAGAGAGGCCCTCCTGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: QLSVPAASALPY*TFSQRGPPGPG
Trigger: CCCTGGCCCAGGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCAGCTGGGACAGAAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS CCA 72 bp CACTGCACCTGCCCCGAACTCCAGCTTCATGACACCTaGCAGGGGTACCTGGTGCACGGCCCTCTCCACATC +
Preference number: 6 (lower is better)
Translates to: HCTCPELQLHDT*QGYLVHGPLHI
Trigger: GATGTGGAGAGGGCCGTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACTaGGCCTCATGCCTGGGCTCGAATCCCAGTTTGCCA +
Preference number: 6 (lower is better)
Translates to: GRWCAVAQTAED*ASCLGSNPSLP
Trigger: TGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 72 bp GCCGTCTCAGTGAAGCCAGGCAGCCTCGTAGGGCCATaGTCGGAGACAAAGGCAGCCAGCAACCGCCCACCA +
Preference number: 6 (lower is better)
Translates to: AVSVKPGSLVGP*SETKAASNRPP
Trigger: TGGTGGGCGGTTGCTGGCTGCCTTTGTCTCCGACAATGGCCCTACGAGGCTGCCTGGCTTCACTGAGACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CAA 90 bp ATGCGGGGGTTGATCTCGATAAGCCGAGGCCCAGCCCCGGTCAGCTaGAGCTCCACGTTGAAGACTCCATCGAGCAACCCGCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: MRGLISISRGPAPVS*SSTLKTPSSNPQPR
Trigger: CCTGGGCTGCGGGTTGCTCGATGGAGTCTTCAACGTGGAGCTCAAGCTGACCGGGGCTGGGCCTCGGCTTATCGAGATCAACCCCCGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CAA 90 bp CAGACGGCAGAGGACTGGGCCTCATGCCTGGGCTCGAATCCCAGTTaGCCAGGGCCAGAGCCTCTGTGCCGTCTCCTAGAAGGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: QTAEDWASCLGSNPS*PGPEPLCRLLEGEL
Trigger: GAGCTCACCTTCTAGGAGACGGCACAGAGGCTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTCTGCCGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 90 bp ATGCAGGCCGCCGTCTCAGTGAAGCCAGGCAGCCTCGTAGGGCCATaGTCGGAGACAAAGGCAGCCAGCAACCGCCCACCAAACAACACC +
Preference number: 6 (lower is better)
Translates to: MQAAVSVKPGSLVGP*SETKAASNRPPNNT
Trigger: GGTGTTGTTTGGTGGGCGGTTGCTGGCTGCCTTTGTCTCCGACAATGGCCCTACGAGGCTGCCTGGCTTCACTGAGACGGCGGCCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CAA 90 bp CCCCTGGGGGCTGATGAGGCTGGGACGAAGAGAATCTCTTGGTTGTaGGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PLGADEAGTKRISWL*GDGVLWPRRQRTGP
Trigger: AGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAGCCCCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS TCA 72 bp CTCCAGGGGACAGGCTCGGCCACCTTGAGCAAGTCGTaGGGTCTCTTTGGACCTTGTTGCCTGGTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LQGTGSATLSKS*GLFGPCCLVPA
Trigger: GGCAGGCACCAGGCAACAAGGTCCAAAGAGACCTCACGACTTGCTCAAGGTGGCCGAGCCTGTCCCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 72 bp CCACTTCCTCTTTCACCAGCGTCTCCTGGCCCTCTTTaGCACTCAGCTCCACCAGCCGTAGCCCTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: PLPLSPASPGPL*HSAPPAVALGW
Trigger: CCAGCCTAGGGCTACGGCTGGTGGAGCTGAGTGGCAAAGAGGGCCAGGAGACGCTGGTGAAAGAGGAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp GCCTCGCCCTGCAAGTCTCGGGTAATCCGGGAAAAGTaGTCATGGCACTGTGGCGCATCCTCTACCAGCCGG +
Preference number: 6 (lower is better)
Translates to: ASPCKSRVIREK*SWHCGASSTSR
Trigger: CCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGGCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp CAGCCCTGCAGCTTTCTGTCCCAGCTGCCAGCGCTTTaGCCTATTGCACGTTCTCCCAGAGAGGCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QPCSFLSQLPAL*PIARSPREALL
Trigger: CAGGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCAGCTGGGACAGAAAGCTGCAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS CCA 72 bp CCGAACTCCAGCTTCATGACACCTGGCAGGGGTACCTaGTGCACGGCCCTCTCCACATCAGCCTCACTCTCC +
Preference number: 6 (lower is better)
Translates to: PNSSFMTPGRGT*CTALSTSASLS
Trigger: GGAGAGTGAGGCTGATGTGGAGAGGGCCGTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp TTCTTGTTCTTTGCAGTCCCCAGGCCTGGACAGGCCTaGCAGCTGAGTCTGTCCTCCAGGGGACAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: FLFFAVPRPGQA*QLSLSSRGQAR
Trigger: CCGAGCCTGTCCCCTGGAGGACAGACTCAGCTGCCAGGCCTGTCCAGGCCTGGGGACTGCAAAGAACAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp CCCAGCCAGGTCCTTTCCTCTTTCACCAGCGTCTCCTaGCCCTCTTTGCCACTCAGCTCCACCAGCCGTAGC +
Preference number: 6 (lower is better)
Translates to: PSQVLSSFTSVS*PSLPLSSTSRS
Trigger: GCTACGGCTGGTGGAGCTGAGTGGCAAAGAGGGCCAGGAGACGCTGGTGAAAGAGGAAAGGACCTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS CAA 72 bp CCAGCCCTGCAGCTTTCTGTCCCAGCTGCCAGCGCTTaGCCCTATTGCACGTTCTCCCAGAGAGGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: PALQLSVPAASA*PYCTFSQRGPP
Trigger: AGGAGGGCCTCTCTGGGAGAACGTGCAATAGGGCAAAGCGCTGGCAGCTGGGACAGAAAGCTGCAGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS CAA 72 bp GAGGACTGGGCCTCATGCCTGGGCTCGAATCCCAGTTaGCCAGGGCCAGAGCCTCTGTGCCGTCTCCTAGAA +
Preference number: 6 (lower is better)
Translates to: EDWASCLGSNPS*PGPEPLCRLLE
Trigger: TTCTAGGAGACGGCACAGAGGCTCTGGCCCTGGCAAACTGGGATTCGAGCCCAGGCATGAGGCCCAGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 90 bp CATCCCCTGGGGGCTGATGAGGCTGGGACGAAGAGAATCTCTTGGTaGTTGGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGACTGGG +
Preference number: 6 (lower is better)
Translates to: HPLGADEAGTKRISW*LGDGVLWPRRQRTG
Trigger: CCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAGCCCCCAGGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS TCA 72 bp GGTCTGTACCAACTGGGATGCAAAGTGGTTGGGGTCTaGCTCCACGAGGTGCAGCTGGAGCCCGTAGTCGCG +
Preference number: 6 (lower is better)
Translates to: GLYQLGCKVVGV*LHEVQLEPVVA
Trigger: CGCGACTACGGGCTCCAGCTGCACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GTCTCGGGTAATCCGGGAAAAGTGCTCATGGCACTGTaGCGCATCCTCTACCAGCCGGACACCCACTGCACC +
Preference number: 6 (lower is better)
Translates to: VSGNPGKVLMAL*RILYQPDTHCT
Trigger: GGTGCAGTGGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp CCCTGCAAGTCTCGGGTAATCCGGGAAAAGTGCTCATaGCACTGTGGCGCATCCTCTACCAGCCGGACACCC +
Preference number: 6 (lower is better)
Translates to: PCKSRVIREKCS*HCGASSTSRTP
Trigger: GGGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GGTCTCCACACATCTGTGCAGCCCCCTCCTCACTTCTaGACCCAGTGGACTTGCACACAGGGGCCAGGATGT +
Preference number: 6 (lower is better)
Translates to: GLHTSVQPPPHF*TQWTCTQGPGC
Trigger: ACATCCTGGCCCCTGTGTGCAAGTCCACTGGGTCCAGAAGTGAGGAGGGGGCTGCACAGATGTGTGGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS CCA 72 bp GGCTGGGACGAAGAGAATCTCTTGGTTGTTGGGAGATaGTGTGCTGTGGCCCAGACGGCAGAGGACTGGGCC +
Preference number: 6 (lower is better)
Translates to: GWDEENLLVVGR*CAVAQTAEDWA
Trigger: GGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 72 bp GCCCACCAAACAACACCAGGTCCACGTCGTGCTCGGTaGCCTCCACAAACTCCATCAGCAGCATGGCATTGC +
Preference number: 6 (lower is better)
Translates to: AHQTTPGPRRAR*PPQTPSAAWHC
Trigger: GCAATGCCATGCTGCTGATGGAGTTTGTGGAGGGCACCGAGCACGACGTGGACCTGGTGTTGTTTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp AGCAACCGCCCACCAAACAACACCAGGTCCACGTCGTaGTCGGTGCCCTCCACAAACTCCATCAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: SNRPPNNTRSTS*SVPSTNSISSM
Trigger: CATGCTGCTGATGGAGTTTGTGGAGGGCACCGAGCACGACGTGGACCTGGTGTTGTTTGGTGGGCGGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp ACACAGAGGAAGTCCCGACAGAGGGCCAGGTACAGATaGACAGGGACTGTCGTCGAGGGTCACAGACGTAGG +
Preference number: 6 (lower is better)
Translates to: TQRKSRQRARYR*TGTVVEGHRRR
Trigger: CCTACGTCTGTGACCCTCGACGACAGTCCCTGTCCATCTGTACCTGGCCCTCTGTCGGGACTTCCTCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525907.1
ENST00000529925.5
CDS CCA 72 bp CTGGGGGCTGATGAGGCTGGGACGAAGAGAATCTCTTaGTTGTTGGGAGATGGTGTGCTGTGGCCCAGACGG +
Preference number: 6 (lower is better)
Translates to: LGADEAGTKRIS*LLGDGVLWPRR
Trigger: CCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 72 bp TTGATCTCGATAAGCCGAGGCCCAGCCCCGGTCAGCTaGAGCTCCACGTTGAAGACTCCATCGAGCAACCCG +
Preference number: 6 (lower is better)
Translates to: LISISRGPAPVS*SSTLKTPSSNP
Trigger: CGGGTTGCTCGATGGAGTCTTCAACGTGGAGCTCAAGCTGACCGGGGCTGGGCCTCGGCTTATCGAGATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CAA 90 bp CCACACATCTGTGCAGCCCCCTCCTCACTTCTGGACCCAGTGGACTaGCACACAGGGGCCAGGATGTCTATAAGATCCAGCCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PHICAAPSSLLDPVD*HTGARMSIRSSLSW
Trigger: CCAGGAGAGGCTGGATCTTATAGACATCCTGGCCCCTGTGTGCAAGTCCACTGGGTCCAGAAGTGAGGAGGGGGCTGCACAGATGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS GCA 72 bp GGACGAAGAGAATCTCTTGGTTGTTGGGAGATGGTGTaGTGTGGCCCAGACGGCAGAGGACTGGGCCTCATG +
Preference number: 6 (lower is better)
Translates to: GRRESLGCWEMV*CGPDGRGLGLM
Trigger: CATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp AAGAGAATCTCTTGGTTGTTGGGAGATGGTGTGCTGTaGCCCAGACGGCAGAGGACTGGGCCTCATGCCTGG +
Preference number: 6 (lower is better)
Translates to: KRISWLLGDGVL*PRRQRTGPHAW
Trigger: CCAGGCATGAGGCCCAGTCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 72 bp TGGATGAAGGTCTGTACCAACTGGGATGCAAAGTGGTaGGGGTCTGACTCCACGAGGTGCAGCTGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: WMKVCTNWDAKW*GSDSTRCSWSP
Trigger: CGGGCTCCAGCTGCACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CAA 72 bp TGTGCAGCCCCCTCCTCACTTCTGGACCCAGTGGACTaGCACACAGGGGCCAGGATGTCTATAAGATCCAGC +
Preference number: 6 (lower is better)
Translates to: CAAPSSLLDPVD*HTGARMSIRSS
Trigger: GCTGGATCTTATAGACATCCTGGCCCCTGTGTGCAAGTCCACTGGGTCCAGAAGTGAGGAGGGGGCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525907.1
CDS GCA 72 bp TCTGCCAGCAGCCGTGCGTTCTCCTCATCCCTCCGGTaGTCTGTCATGTCAAAGTGGATGAAGGTCTGTACC +
Preference number: 6 (lower is better)
Translates to: SASSRAFSSSLR*SVMSKWMKVCT
Trigger: GGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAGGGATGAGGAGAACGCACGGCTGCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS GCA 72 bp GGCGAAGGCTTGTTAATGGGAACGCAACCGTGGGAGTaGTTTGTAAACTGTTCTGTGTGGTGCCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GEGLLMGTQPWE*FVNCSVWCPWG
Trigger: CCCCCAGGGGCACCACACAGAACAGTTTACAAAGCACTCCCACGGTTGCGTTCCCATTAACAAGCCTTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp CTGATGAGGCTGGGACGAAGAGAATCTCTTGGTTGTTaGGAGATGGTGTGCTGTGGCCCAGACGGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: LMRLGRRESLGC*EMVCCGPDGRG
Trigger: TCCTCTGCCGTCTGGGCCACAGCACACCATCTCCCAACAACCAAGAGATTCTCTTCGTCCCAGCCTCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp AAGTGGATGAAGGTCTGTACCAACTGGGATGCAAAGTaGTTGGGGTCTGACTCCACGAGGTGCAGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: KWMKVCTNWDAK*LGSDSTRCSWS
Trigger: GCTCCAGCTGCACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp GTTGGGGGCGAAGGCTTGTTAATGGGAACGCAACCGTaGGAGTGCTTTGTAAACTGTTCTGTGTGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: VGGEGLLMGTQP*ECFVNCSVWCP
Trigger: GGGGCACCACACAGAACAGTTTACAAAGCACTCCCACGGTTGCGTTCCCATTAACAAGCCTTCGCCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 90 bp GTCCCGGGGACTAGGAGAGGAAAGGCTTGTGTTGGGGGCGAAGGCTaGTTAATGGGAACGCAACCGTGGGAGTGCTTTGTAAACTGTTCT +
Preference number: 6 (lower is better)
Translates to: VPGTRRGKACVGGEG*LMGTQPWECFVNCS
Trigger: AGAACAGTTTACAAAGCACTCCCACGGTTGCGTTCCCATTAACAAGCCTTCGCCCCCAACACAAGCCTTTCCTCTCCTAGTCCCCGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CAA 72 bp GAAGACAAGGGTTCTAGTCTCAGGTTTTCCCAGGATTaGTCCAAGGCTTGGGGCCCAGCCAGGTCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: EDKGSSLRFSQD*SKAWGPARSFP
Trigger: AGGAAAGGACCTGGCTGGGCCCCAAGCCTTGGACAAATCCTGGGAAAACCTGAGACTAGAACCCTTGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531958.5
CDS TCA 72 bp CCTCATCCCTCCGGTGCTCTGTCATGTCAAAGTGGATaGAGGTCTGTACCAACTGGGATGCAAAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: PHPSGALSCQSG*RSVPTGMQSGW
Trigger: CCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAGGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CAA 72 bp ACTAGGAGAGGAAAGGCTTGTGTTGGGGGCGAAGGCTaGTTAATGGGAACGCAACCGTGGGAGTGCTTTGTA +
Preference number: 6 (lower is better)
Translates to: TRRGKACVGGEG*LMGTQPWECFV
Trigger: TACAAAGCACTCCCACGGTTGCGTTCCCATTAACAAGCCTTCGCCCCCAACACAAGCCTTTCCTCTCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS GCA 72 bp GTTTTGTTCATGGAGGCAACCCCAGCACCTAAAGCGTaGCTGGCACACAGCCACTTCTCAGTAAGTGTTTGT +
Preference number: 6 (lower is better)
Translates to: VLFMEATPAPKA*LAHSHFSVSVC
Trigger: ACAAACACTTACTGAGAAGTGGCTGTGTGCCAGGCACGCTTTAGGTGCTGGGGTTGCCTCCATGAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp TCTGTCATGTCAAAGTGGATGAAGGTCTGTACCAACTaGGATGCAAAGTGGTTGGGGTCTGACTCCACGAGG +
Preference number: 6 (lower is better)
Translates to: SVMSKWMKVCTN*DAKWLGSDSTR
Trigger: CCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS CCA 72 bp TTCTCCTCATCCCTCCGGTGCTCTGTCATGTCAAAGTaGATGAAGGTCTGTACCAACTGGGATGCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: FSSSLRCSVMSK*MKVCTNWDAKW
Trigger: CCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGGAGGGATGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307823.7
ENST00000445895.2
ENST00000531040.5
ENST00000531388.1
CDS TCA 72 bp GCTTATTTCTGTCTCATGACCCGGCATGGAGTGTGCTaGCACCTAAATGTGATTCCACTGTCATCCCCACGT +
Preference number: 6 (lower is better)
Translates to: AYFCLMTRHGVC*HLNVIPLSSPR
Trigger: ACGTGGGGATGACAGTGGAATCACATTTAGGTGTCAGCACACTCCATGCCGGGTCATGAGACAGAAATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5
CDS CCA 72 bp CCCTGCAGATATTTTGAGTCACGGAAATGCTTTCTTTaGATGAAACCTAACGTCCCTCCCCTCTCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PCRYFESRKCFL*MKPNVPPLSEA
Trigger: AGCCTCAGAGAGGGGAGGGACGTTAGGTTTCATCCAAAGAAAGCATTTCCGTGACTCAAAATATCTGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531388.1
ENST00000531958.5