Pregenerated sensors for CARNMT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000156017Ensembl transcript IDs: ENST00000376830.3, ENST00000376834.8, ENST00000451153.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACTATTTCTAAATTTCGTTAGGAATAAGAAGGCACCACTGATTTaGGGTTGTGTCCTGTCATCACTGATAGTTGATTTTGAGTCGTTG | + |
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Preference number: 1 (lower is better) Translates to: TLFLNFVRNKKAPLI*GCVLSSLIVDFESL Trigger: CAACGACTCAAAATCAACTATCAGTGATGACAGGACACAACCTCAAATCAGTGGTGCCTTCTTATTCCTAACGAAATTTAGAAATAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACACTGCACTCCGGCCTaGGAGACAGAGCGGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTHCTPA*ETERDP Trigger: AGGATCCCGCTCTGTCTCCCAGGCCGGAGTGCAGTG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAGGTTACAGTGAGCTATaGTCGTGCCACTGCACTCCG | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTGYSEL*SCHCTP Trigger: CGGAGTGCAGTGGCACGATCATAGCTCACTGTAACC...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAGGCAGGAAGATCGCTTaGGTCCAGGAGTTTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTGRKIA*VQEFEV Trigger: AACCTCAAACTCCTGGACTCAAGCGATCTTCCTGCC...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAAAGGCACCACTGATTTaGGGTTGTGTCCTGTCATCA | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTKAPLI*GCVLSS Trigger: TGATGACAGGACACAACCTCAAATCAGTGGTGCCTT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAATAAGAAGGCACCACTaGTTTGAGGTTGTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTIRRHH*FEVVSC Trigger: ACAGGACACAACCTCAAATCAGTGGTGCCTTCTTAT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACAATGGACAGCATCATaGAGACACTGGAGATTAGGT | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTQWTAS*RHWRLG Trigger: ACCTAATCTCCAGTGTCTTCATGATGCTGTCCATTG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAGATGTTGAATATGACTaGGGATCCTTAGACTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTDVEYD*GSLDSS Trigger: AGAAGAGTCTAAGGATCCTCAGTCATATTCAACATC...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATTAATTCGGCAGACTTaGAATGGACAGCATCATGAA | + |
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Preference number: 2 (lower is better) Translates to: INLNDKIDTGQARWYMPTLIRQT*NGQHHE Trigger: TTCATGATGCTGTCCATTGCAAGTCTGCCGAATTAA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAGAAGGCACCACTGATTaGAGGTTGTGTCCTGTCATC | + |
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Preference number: 3 (lower is better) Translates to: INLNDKIDTGQARWYMPTEGTTD*RLCPVI Trigger: GATGACAGGACACAACCTCAAATCAGTGGTGCCTTC...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAACCACTGATTTGAGGTaGTGTCCTGTCATCACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: INLNDKIDTGQARWYMPTTTDLR*CPVITD Trigger: ATCAGTGATGACAGGACACAACCTCAAATCAGTGGT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| 3UTR TCA 72 bp | CTAAATTTCGTTAGGAATAAGAAGGCACCACTGATTTaGGGTTGTGTCCTGTCATCACTGATAGTTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: LNFVRNKKAPLI*GCVLSSLIVDF Trigger: AAAATCAACTATCAGTGATGACAGGACACAACCTCAAATCAGTGGTGCCTTCTTATTCCTAACGAAATTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACCGCGGCCCTCGGCCTaGCTCGCTTGCGTCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTPRPSA*LACVSP Trigger: CGGAGAGACGCAAGCGAGCCAGGCCGAGGGCCGCGG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACTTCCACCTCCTCGCTaGCACCGCCTCCTCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTLPPPR*HRLLPR Trigger: GCGGGGGAGGAGGCGGTGGCAGCGAGGAGGTGGAAG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATCGGCCTGGCTCGCTTaGGTCTCTCCGCGACCGACA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTSAWLA*VSPRPT Trigger: TGTCGGTCGCGGAGAGACGCAAGCGAGCCAGGCCGA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACGCCCGGCGGAAAACTaGACTTCCACCTCCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTRPAEN*TSTSSL Trigger: CAGCGAGGAGGTGGAAGTGCAGTTTTCCGCCGGGCG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACCCGCTCATGCATACTaGTGCCGTAGTAGCGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTPAHAY*CRSSGR Trigger: CCTTCCGCTACTACGGCACCAGTATGCATGAGCGGG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAACAGGCCAGGCGCGGTaGTACATGCCTACAGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTTGQAR*YMPTVL Trigger: TAGGACTGTAGGCATGTACCACCGCGCCTGGCCTGT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACCAGGAGGAAGACTGTaGGGGTCAACATCAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTPGGRL*GSTSGK Trigger: TTTCCCTGATGTTGACCCCCACAGTCTTCCTCCTGG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAATGATCTTCCAGAAGTaGTCACGCTCAAGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTMIFQK*SRSSLS Trigger: GGAGAGGCTTGAGCGTGAGCACTTCTGGAAGATCAT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAACAGGCATCCCTTTCTaGTTTCCCAGTTTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTTGIPF*FPSFTP Trigger: TGGAGTGAAACTGGGAAAGCAGAAAGGGATGCCTGT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACCAGGTGGTATCACTTaGGACCATTATTGTGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTPGGIT*DHYCGL Trigger: TAAGCCACAATAATGGTCTCAAGTGATACCACCTGG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACATCAGGGAAAAAGATaGGTCGAATCTGATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTHQGKR*VESDQL Trigger: CAGCTGATCAGATTCGACCCATCTTTTTCCCTGATG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAGCCAGATTTTCAAAGTaGTACAGCAGAGGACCTAGA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTARFSK*YSRGPR Trigger: TCTAGGTCCTCTGCTGTACCACTTTGAAAATCTGGC...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATTGGTTAGCTGGAAGTaGTCGAAACTGTCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTLVSWK*SKLSFC Trigger: ACAGAAAGACAGTTTCGATCACTTCCAGCTAACCAA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATCGAATCTGATCAGCTaGTCTCCGGTTATTGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTSNLIS*SPVIAK Trigger: TTTAGCAATAACCGGAGATCAGCTGATCAGATTCGA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATTTCCACCTCTACCTTaGATCCATACTGCAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTFPPLP*IHTAEQ Trigger: TTGTTCTGCAGTATGGATTCAAGGTAGAGGTGGAAA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATTGAGACCATTATTGTaGCTTACGGACCACAAACAA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTLRPLL*LTDHKQ Trigger: TTGTTTGTGGTCCGTAAGCCACAATAATGGTCTCAA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR TCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACAGTCTTCCCAATTTTaGCATGTCAGATTAACTACA | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTQSSQF*HVRLTT Trigger: TGTAGTTAATCTGACATGTCAAAATTGGGAAGACTG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAAATTTCTTTAATGATTaGCTGGTAACAGGCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTNFFND*LVTGIP Trigger: AGGGATGCCTGTTACCAGCCAATCATTAAAGAAATT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACATGTCAAATGTAGATaGTGGCATAATCTTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTHVKCR*WHNLSI Trigger: AATGGAAAGATTATGCCAGCATCTACATTTGACATG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATACAGTCCCAGGTATTaGATTCTGAATAAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTYSPRY*ILNKSL Trigger: AAGAGATTTATTCAGAATGCAATACCTGGGACTGTA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATATCCAAATTCCACCTaGCTTGAGTATTTTCCATAT | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTYPNST*LEYFPY Trigger: ATATGGAAAATACTCAAGCCAGGTGGAATTTGGATA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACATAGCTCAATTCTATaGAAAGTTCATTTGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: INLNDKIDTGQARWYMPTHSSIL*KVHLPD Trigger: ATCTGGCAAATGAACTTTCCATAGAATTGAGCTATG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS CCA 90 bp | GCGGAGGGCGACGCCGTCGCTGCATCGCCGCCGCGGCCCTCGGCCTaGCTCGCTTGCGTCTCTCCGCGACCGACAGCGTGGTGGCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: AEGDAVAASPPRPSA*LACVSPRPTAWWRL Trigger: CAGCCGCCACCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGCCAGGCCGAGGGCCGCGGCGGCGATGCAGCGACGGCGTCGCCCTCCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 90 bp | CGGCCCTCGGCCTGGCTCGCTTGCGTCTCTCCGCGACCGACAGCGTaGTGGCGGCTGCTTGGCCTTCCTCTAGACGGCGCCCGCCGCGGA | + |
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Preference number: 5 (lower is better) Translates to: RPSAWLACVSPRPTA*WRLLGLPLDGARRG Trigger: TCCGCGGCGGGCGCCGTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGCCAGGCCGAGGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 90 bp | AGTGCTCACGCTCAAGCCTCTCCTCCTCCTCCTCGGTGCTGCGCGTaGCCGCCGCCGCTGCCGCCGAAACCGCCGCGGCCGAGCCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: SAHAQASPPPPRCCA*PPPLPPKPPRPSPN Trigger: GTTGGGGCTCGGCCGCGGCGGTTTCGGCGGCAGCGGCGGCGGCCACGCGCAGCACCGAGGAGGAGGAGGAGAGGCTTGAGCGTGAGCACT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376830.3 ENST00000376834.8 |
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| CDS GCA 90 bp | TCCAGAAGTGCTCACGCTCAAGCCTCTCCTCCTCCTCCTCGGTGCTaGGCGTGGCCGCCGCCGCTGCCGCCGAAACCGCCGCGGCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SRSAHAQASPPPPRC*AWPPPLPPKPPRPS Trigger: GCTCGGCCGCGGCGGTTTCGGCGGCAGCGGCGGCGGCCACGCGCAGCACCGAGGAGGAGGAGGAGAGGCTTGAGCGTGAGCACTTCTGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376830.3 ENST00000376834.8 |
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| CDS GCA 90 bp | TCTTCCAGAAGTGCTCACGCTCAAGCCTCTCCTCCTCCTCCTCGGTaGTGCGCGTGGCCGCCGCCGCTGCCGCCGAAACCGCCGCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SSRSAHAQASPPPPR*CAWPPPLPPKPPRP Trigger: CGGCCGCGGCGGTTTCGGCGGCAGCGGCGGCGGCCACGCGCAGCACCGAGGAGGAGGAGGAGAGGCTTGAGCGTGAGCACTTCTGGAAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376830.3 ENST00000376834.8 |
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| CDS CCA 90 bp | GCTCGCTTGCGTCTCTCCGCGACCGACAGCGTGGTGGCGGCTGCTTaGCCTTCCTCTAGACGGCGCCCGCCGCGGACATGCCCCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: ARLRLSATDSVVAAA*PSSRRRPPRTCPQL Trigger: GAGCTGGGGGCATGTCCGCGGCGGGCGCCGTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 90 bp | CCCTCGGCCTGGCTCGCTTGCGTCTCTCCGCGACCGACAGCGTGGTaGCGGCTGCTTGGCCTTCCTCTAGACGGCGCCCGCCGCGGACAT | + |
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Preference number: 5 (lower is better) Translates to: PSAWLACVSPRPTAW*RLLGLPLDGARRGH Trigger: ATGTCCGCGGCGGGCGCCGTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGCCAGGCCGAGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACTCGGCCTGGCTCGCTaGCGTCTCTCCGCGACCGAC | + |
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Preference number: 5 (lower is better) Translates to: INLNDKIDTGQARWYMPTLGLAR*RLSATD Trigger: GTCGGTCGCGGAGAGACGCAAGCGAGCCAGGCCGAG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS TCA 90 bp | GTGGGGGTCAACATCAGGGAAAAAGATGGGTCGAATCTGATCAGCTaGTCTCCGGTTATTGCTAAACTGATGGATCCAAGGATAAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VGVNIREKDGSNLIS*SPVIAKLMDPRIKF Trigger: AAACTTTATCCTTGGATCCATCAGTTTAGCAATAACCGGAGATCAGCTGATCAGATTCGACCCATCTTTTTCCCTGATGTTGACCCCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000376834.8 ENST00000451153.1 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACACTTGAGACCATTATaGTGGCTTACGGACCACAAA | + |
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Preference number: 5 (lower is better) Translates to: INLNDKIDTGQARWYMPTHLRPL*WLTDHK Trigger: TTTGTGGTCCGTAAGCCACAATAATGGTCTCAAGTG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACATTTTCCACCTCTACCTaGAATCCATACTGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: INLNDKIDTGQARWYMPTFSTST*NPYCRT Trigger: TGTTCTGCAGTATGGATTCAAGGTAGAGGTGGAAAA...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACAAATTCCACCTGGCTaGAGTATTTTCCATATTGTA | + |
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Preference number: 5 (lower is better) Translates to: INLNDKIDTGQARWYMPTQIPPG*SIFHIV Trigger: TACAATATGGAAAATACTCAAGCCAGGTGGAATTTG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACACTATGGAAAGTTCATTaGCCAGATTTTCAAAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: INLNDKIDTGQARWYMPTLWKVH*PDFQSG Trigger: ACCACTTTGAAAATCTGGCAAATGAACTTTCCATAG...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGAATGATAAAATAGACACAGGCCAGGCGCGGTGGTACATGCCTACAACAGTCTTCCCAATTTaGACATGTCAGATTAACTAC | + |
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Preference number: 5 (lower is better) Translates to: INLNDKIDTGQARWYMPTTVFPI*TCQINY Trigger: GTAGTTAATCTGACATGTCAAAATTGGGAAGACTGT...TGTAGGCATGTACCACCGCGCCTGGCCTGTGTCTATTTTATCATTCAGATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376834.8 |
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| CDS GCA 90 bp | TGCAATCATTCACAATGGTCAGTAGTATTTCTTGATTATGATCAATaGATTTCCGGATCTTGTCCAAGTGAAGAAGAAACTGAGGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: CNHSQWSVVFLDYDQ*ISGSCPSEEETEEV Trigger: TACTTCCTCAGTTTCTTCTTCACTTGGACAAGATCCGGAAATGCATTGATCATAATCAAGAAATACTACTGACCATTGTGAATGATTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376830.3 ENST00000376834.8 ENST00000451153.1 |
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| CDS GCA 72 bp | GCTTGGCCTTCCTCTAGACGGCGCCCGCCGCGGACATaGCCCCAGCTCGCGGCGCGCTCCGCCCCCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: AWPSSRRRPPRT*PQLAARSAPAT Trigger: GGTGGCGGGGGCGGAGCGCGCCGCGAGCTGGGGGCATGTCCGCGGCGGGCGCCGTCTAGAGGAAGGCCAAGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 72 bp | GCTCAAGCCTCTCCTCCTCCTCCTCGGTGCTGCGCGTaGCCGCCGCCGCTGCCGCCGAAACCGCCGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AQASPPPPRCCA*PPPLPPKPPRP Trigger: CGGCCGCGGCGGTTTCGGCGGCAGCGGCGGCGGCCACGCGCAGCACCGAGGAGGAGGAGGAGAGGCTTGAGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376830.3 ENST00000376834.8 |
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| CDS CCA 72 bp | GACGCCGTCGCTGCATCGCCGCCGCGGCCCTCGGCCTaGCTCGCTTGCGTCTCTCCGCGACCGACAGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: DAVAASPPRPSA*LACVSPRPTAW Trigger: CCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGCCAGGCCGAGGGCCGCGGCGGCGATGCAGCGACGGCGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 72 bp | CGTCTCTCCGCGACCGACAGCGTGGTGGCGGCTGCTTaGCCTTCCTCTAGACGGCGCCCGCCGCGGACATGC | + |
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Preference number: 6 (lower is better) Translates to: RLSATDSVVAAA*PSSRRRPPRTC Trigger: GCATGTCCGCGGCGGGCGCCGTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTGTCGGTCGCGGAGAGACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 72 bp | TGGCTCGCTTGCGTCTCTCCGCGACCGACAGCGTGGTaGCGGCTGCTTGGCCTTCCTCTAGACGGCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: WLACVSPRPTAW*RLLGLPLDGAR Trigger: GCGGGCGCCGTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS CCA 72 bp | GCCTGGCTCGCTTGCGTCTCTCCGCGACCGACAGCGTaGTGGCGGCTGCTTGGCCTTCCTCTAGACGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: AWLACVSPRPTA*WRLLGLPLDGA Trigger: GGCGCCGTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTGTCGGTCGCGGAGAGACGCAAGCGAGCCAGGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376830.3 |
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| CDS GCA 72 bp | GATCGAAACTGTCTTTCTGTTCGGTTCACCCGCTCATaGATACTGGTGCTGCGTAGGAGGTCATGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: DRNCLSVRFTRS*ILVLRRRSCLS Trigger: AGACAGACATGACCTCCTACGCAGCACCAGTATGCATGAGCGGGTGAACCGAACAGAAAGACAGTTTCGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451153.1 |
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| CDS CCA 72 bp | GAGGAAGACTGTGGGGGTCAACATCAGGGAAAAAGATaGGTCGAATCTGATCAGCTGATCTCCGGTTATTGC | + |
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Preference number: 6 (lower is better) Translates to: EEDCGGQHQGKR*VESDQLISGYC Trigger: GCAATAACCGGAGATCAGCTGATCAGATTCGACCCATCTTTTTCCCTGATGTTGACCCCCACAGTCTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000376834.8 ENST00000451153.1 |
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| CDS TCA 72 bp | AACATCAGGGAAAAAGATGGGTCGAATCTGATCAGCTaGTCTCCGGTTATTGCTAAACTGATGGATCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: NIREKDGSNLIS*SPVIAKLMDPR Trigger: CCTTGGATCCATCAGTTTAGCAATAACCGGAGATCAGCTGATCAGATTCGACCCATCTTTTTCCCTGATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376834.8 ENST00000451153.1 |
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| CDS GCA 72 bp | TTCTTTAATGATTGGCTGGTAACAGGCATCCCTTTCTaGTTTCCCAGTTTCACTCCAGTCTCTCACAAACTG | + |
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Preference number: 6 (lower is better) Translates to: FFNDWLVTGIPF*FPSFTPVSHKL Trigger: CAGTTTGTGAGAGACTGGAGTGAAACTGGGAAAGCAGAAAGGGATGCCTGTTACCAGCCAATCATTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376834.8 ENST00000451153.1 |
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