RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARMIL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000186648

Ensembl transcript IDs: ENST00000342740.6, ENST00000559694.5, ENST00000560349.1, ENST00000561354.1, ENST00000644899.1, ENST00000645304.1, ENST00000646194.1, ENST00000646442.2

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTaGCAGCCTCCGTCTCTCCAGGTGGCTCCCTCTGTTCTAGTCCCT +
Preference number: 1 (lower is better)
Translates to: PHPEALCRERYRGRH*QPPSLQVAPSVLVP
Trigger: AGGGACTAGAACAGAGGGAGCCACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCAGCTCCCCCATGCCTaGTCCTGCCGTCTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREQLPHA*SCRLAP
Trigger: AGGGGCAAGACGGCAGGACCAGGCATGGGGGAGCTG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCTGGTCCTGCCGTCTTaGCCCTGTAGGACAGGGGCT +
Preference number: 2 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRELVLPS*PCRTGA
Trigger: AGCCCCTGTCCTACAGGGGCAAGACGGCAGGACCAG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGTATCGAGGCAGGCACTaGCAGCCTCCGTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: STLLGEEISPHPEALCREYRGRH*QPPSLQ
Trigger: CTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATA...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTAGGGGTCTGAGTCCTTaGGAGGCACATGTCGAGGGC +
Preference number: 2 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSRGLSP*EAHVEG
Trigger: GCCCTCGACATGTGCCTCGCAAGGACTCAGACCCCT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCCCCATGCCTGGTCCTaGCGTCTTGCCCCTGTAGGA +
Preference number: 2 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLPHAWS*RLAPVG
Trigger: TCCTACAGGGGCAAGACGGCAGGACCAGGCATGGGG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTCTGTTCTAGTCCCTaGCTCCAGCTCCCCCATGCC +
Preference number: 2 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLCSSP*LQLPHA
Trigger: GGCATGGGGGAGCTGGAGGCAGGGACTAGAACAGAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCAGCTCCCCCATGCCTaGTCCTGCCGTCTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: DKPPPRSSLQREVSRQALQLPHA*SCRLAP
Trigger: AGGGGCAAGACGGCAGGACCAGGCATGGGGGAGCTG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGCACATGTCGAGGGCTaGGGAGGGTGTTGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLAHVEG*GGCCGS
Trigger: ACTGCCACAACACCCTCCTCAGCCCTCGACATGTGC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACTGGTCCTGCCGTCTTaGCCCTGTAGGACAGGGGCT +
Preference number: 2 (lower is better)
Translates to: SSLQREVSRQALTASVSPLVLPS*PCRTGA
Trigger: AGCCCCTGTCCTACAGGGGCAAGACGGCAGGACCAG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACCCCATGCCTGGTCCTaGCGTCTTGCCCCTGTAGGA +
Preference number: 2 (lower is better)
Translates to: SSLQREVSRQALTASVSPPHAWS*RLAPVG
Trigger: TCCTACAGGGGCAAGACGGCAGGACCAGGCATGGGG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR TCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGCACATGTCGAGGGCTaGGGAGGGTGTTGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: SLQREVSRQALTASVSPGAHVEG*GGCCGS
Trigger: ACTGCCACAACACCCTCCTCAGCCCTCGACATGTGC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR TCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGGTGGATAGGGGTCTaGGTCCTTGCGAGGCACATG +
Preference number: 2 (lower is better)
Translates to: SSLQREVSRQALTASVSPGWIGV*VLARHM
Trigger: CATGTGCCTCGCAAGGACTCAGACCCCTATCCACCC...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
3UTR-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCTCTGTTCTAGTCCCTaGCTCCAGCTCCCCCATGCC +
Preference number: 2 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLCSSP*LQLPHA
Trigger: GGCATGGGGGAGCTGGAGGCAGGGACTAGAACAGAG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGGCAGTCCGCCGGCCTaGATCAGGGGGCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSGSPPA*IRGPLD
Trigger: GTCCAAGGGCCCCCTGATCCAGGCCGGCGGACTGCC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGGCTTGGGCTCCCGCTaGACGGAGCTCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALGLGSR*TELAAA
Trigger: AGCAGCTGCGAGCTCCGTTCAGCGGGAGCCCAAGCC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGCCAGACGTCCTCGGTaGGCTCAGGCGCGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREARRPR*AQARCD
Trigger: ATCGCAGCGCGCCTGAGCGCACCGAGGACGTCTGGC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGCCCGCACCTCCTCCTaGACTCGTCCACACAGCCGC +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREARTSS*TRPHSR
Trigger: GCGGCTGTGTGGACGAGTGCAGGAGGAGGTGCGGGC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGAGTGGAGGCAGCGGTaGCTCCGAGAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREEWRQR*LRESWP
Trigger: CGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTTGCAACTCGCGGGTaGGCTCCACGCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLATRG*APRWAW
Trigger: CCAAGCCCAGCGTGGAGCTCACCCGCGAGTTGCAAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGAAGGTCTGGCCGAGTaGCTGGAGCCCTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREEGLAE*LEPSRG
Trigger: TCCCCTCGAGGGCTCCAGGCACTCGGCCAGACCTTC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGCGCTGCTGAAGAACTaGTTGAAGGCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALALLKN*LKAGGA
Trigger: GGCCCCGCCGGCCTTCAAGCAGTTCTTCAGCAGCGC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGCTCCCAGCTGCTCCTaGAAGGCTTGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREAPSCS*KAWAPA
Trigger: AGCGGGAGCCCAAGCCTTGCAGGAGCAGCTGGGAGC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGCTCCCAGCTGCTCCTaGAAGGCTTGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALAPSCS*KAWAPA
Trigger: AGCGGGAGCCCAAGCCTTGCAGGAGCAGCTGGGAGC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAACCCTTGGCTGCTGTaGTGTCCCAGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRENPWLL*CPRGWA
Trigger: GGCCCAGCCCCTGGGACAGCACAGCAGCCAAGGGTT...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCTCCACGCTGGGCTTaGCCATGGCGGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALAPRWA*PWRPLL
Trigger: CAGCAGCGGCCGCCATGGCCAAGCCCAGCGTGGAGC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGCTCCACGCTGGGCTTaGCCATGGCGGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHAPRWA*PWRPLL
Trigger: CAGCAGCGGCCGCCATGGCCAAGCCCAGCGTGGAGC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGAGCACGGCCCCTTaGCTCAGGCACCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALWSTAP*LRHLRM
Trigger: CATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTGGGAGCAGCAGCCGTaGAGCAGGGCACCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREWEQQP*SRAPRS
Trigger: GCTTCTCGGTGCCCTGCTCCACGGCTGCTGCTCCCA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGCTTTGGGGCGGTGGTaGGGGCTTCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSALGRW*GLPGSR
Trigger: CCTGGATCCTGGAAGCCCCCACCACCGCCCCAAAGC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGCTTTGGGGCGGTGGTaGGGGCTTCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREALGRW*GLPGSR
Trigger: CCTGGATCCTGGAAGCCCCCACCACCGCCCCAAAGC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGGTGCTTTGGGGCGGTaGTGGGGGCTTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSGALGR*WGLPGS
Trigger: GGATCCTGGAAGCCCCCACCACCGCCCCAAAGCACC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGGTGCTTTGGGGCGGTaGTGGGGGCTTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREGALGR*WGLPGS
Trigger: GGATCCTGGAAGCCCCCACCACCGCCCCAAAGCACC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGGCAGTCCGCCGGCCTaGATCAGGGGGCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYGSPPA*IRGPLD
Trigger: GTCCAAGGGCCCCCTGATCCAGGCCGGCGGACTGCC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGGAGCTCGCAGCTGCTaGGATCCAGGTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALGARSC*DPGAGH
Trigger: GTGACCTGCACCTGGATCTCAGCAGCTGCGAGCTCC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGGCTTGGGCTCCCGCTaGACGGAGCTCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYGLGSR*TELAAA
Trigger: AGCAGCTGCGAGCTCCGTTCAGCGGGAGCCCAAGCC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCAGGCCCTGCGTCGTCTaGAGAGCGCCGTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALRPCVV*RAPFLP
Trigger: TGGCAGAAACGGCGCTCTTCAGACGACGCAGGGCCT...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTCTTGGTCTTGCTGTaGGCTCAGCCTCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLLVLL*AQPQPG
Trigger: CCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCCAGACGTCCTCGGTaGGCTCAGGCGCGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALARRPR*AQARCD
Trigger: ATCGCAGCGCGCCTGAGCGCACCGAGGACGTCTGGC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTGGTCACCAGGCCCTaGTGCAACCTGAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLVTRP*CNLKAC
Trigger: GCAGGCCTTCAGGTTGCAGCAGGGCCTGGTGACCAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGCCCGCACCTCCTCCTaGACTCGTCCACACAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYARTSS*TRPHSR
Trigger: GCGGCTGTGTGGACGAGTGCAGGAGGAGGTGCGGGC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCTTAGCTGGGTCAGGTaGCGGGCCAGGCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRELSWVR*RARLLW
Trigger: CCACAAGAGCCTGGCCCGGCACCTGACCCAGCTAAG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCGGGAGGACAGATCCTaGCCTTGGCCTGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLREDRS*PWPGHP
Trigger: AGGGTGCCCAGGCCAAGGGCAGGATCTGTCCTCCCG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAGAGTGGAGGCAGCGGTaGCTCCGAGAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAEWRQR*LRESWP
Trigger: CGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTC...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGATCCAGGGAGGAGGCTaGTCTCCTCCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREIQGGG*SPPLGS
Trigger: GGAGCCCAGAGGAGGAGAGCAGCCTCCTCCCTGGAT...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGCTCTGACCCCTCAGTaGCCATCTTCCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREALTPQ*PSSGGR
Trigger: CCTTCCGCCGGAAGATGGGCACTGAGGGGTCAGAGC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCCCCATGCCTGGTCCTaGCGTCTTGCCCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREPHAWS*RLAPVG
Trigger: TCCTACAGGGGCAAGACGGCAGGACCAGGCATGGGG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTGGAGCACGGCCCCTTaGCTCAGGCACCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLWSTAP*LRHLRM
Trigger: CATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCATCTCGGGGCCCCTCTaGGGTGTCTGCGTTTCCACG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALISGPL*GVCVST
Trigger: CGTGGAAACGCAGACACCCCAGAGGGGCCCCGAGAT...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTATCTCGGGGCCCCTCTaGGGTGTCTGCGTTTCCACG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSISGPL*GVCVST
Trigger: CGTGGAAACGCAGACACCCCAGAGGGGCCCCGAGAT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGTCTGGCCGAGTGCCTaGAGCCCTCGAGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSVWPSA*SPRGEM
Trigger: CATTTCCCCTCGAGGGCTCCAGGCACTCGGCCAGAC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTTTTGCCCCGAAGGTCTaGCCGAGTGCCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSFAPKV*PSAWSP
Trigger: AGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAA...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTTTGCTCGGCGCTGCTaGTCACCAGGCCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALFARRC*SPGPAA
Trigger: TGCAGCAGGGCCTGGTGACCAGCAGCGCCGAGCAAA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCCTCGGCCACCCGCATaGCCACAGGGCATAACTCCT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREPRPPA*PQGITP
Trigger: AGGAGTTATGCCCTGTGGCCATGCGGGTGGCCGAGG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCCTCCGAGAGTCCTaGCCGCACGGTCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALCLRES*PHGPQS
Trigger: ACTCTGAGGACCGTGCGGCCAGGACTCTCGGAGGCA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGTTATTGCCGAGGCTTaGGGGGTCTGGGCTAGGGGG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREVIAEA*GVWARG
Trigger: CCCCCTAGCCCAGACCCCCCAAGCCTCGGCAATAAC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGGATCAGGGGGCCCTTaGACTTCGGGCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSGSGGP*TSGSSW
Trigger: CCAAGAGGAGCCCGAAGTCCAAGGGCCCCCTGATCC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCCAGGCACAGTTTGGTaGGGCCAGAGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREPGTVW*GQRGSR
Trigger: TCTGCTTCCCCTCTGGCCTCACCAAACTGTGCCTGG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCCAGGCACAGTTTGGTaGGGCCAGAGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREPGTVW*GQRGSR
Trigger: TCTGCTTCCCCTCTGGCCTCACCAAACTGTGCCTGG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGACGCAGTCAGTTCCTaGCAGGTCCAGGTGCACCAG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREDAVSS*QVQVHQ
Trigger: CTGGTGCACCTGGACCTGTCAGGAACTGACTGCGTC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTTCACGGGGAAGGACATaGAGCGCAGCGTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSSRGRT*SAACGC
Trigger: GCAACCACACGCTGCGCTTCATGTCCTTCCCCGTGA...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAGTTCCGGGGCACAGTaGCACGCTCCGCCACATTGC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLSSGAQ*HAPPHC
Trigger: GCAATGTGGCGGAGCGTGTCACTGTGCCCCGGAACT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCCAGGACCCTTCGGCTaGAGAAGTCCTCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREPGPFG*RSPPAL
Trigger: AAGGGCTGGAGGACTTCTTCAGCCGAAGGGTCCTGG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGGAAGGGCAACACCGTaGACCCTTGGCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREGRATP*TLGCCA
Trigger: AGCACAGCAGCCAAGGGTTCACGGTGTTGCCCTTCC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTCTTGGTCTTGCTGTaGGCTCAGCCTCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLLVLL*AQPQPG
Trigger: CCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGCACATGTCGAGGGCTaGGGAGGGTGTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREAHVEG*GGCCGS
Trigger: ACTGCCACAACACCCTCCTCAGCCCTCGACATGTGC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGCACATGTCGAGGGCTaGGGAGGGTGTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALAHVEG*GGCCGS
Trigger: ACTGCCACAACACCCTCCTCAGCCCTCGACATGTGC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGGGTGGATAGGGGTCTaGGTCCTTGCGAGGCACATG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREGWIGV*VLARHM
Trigger: CATGTGCCTCGCAAGGACTCAGACCCCTATCCACCC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTATCGAGGCAGGCACTaGCAGCCTCCGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREYRGRH*QPPSLQ
Trigger: CTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGTCGCATGCTCACCATaGCACGCTCCGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSVACSP*HAPSPP
Trigger: TGGTGGAGACGGAGCGTGGCATGGTGAGCATGCGAC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCTGATGGCAGTCGCATaGTCACCATGCCACGCTCCG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRELMAVA*SPCHAP
Trigger: CGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGAAGGTCTGGCCGAGTaGCTGGAGCCCTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYEGLAE*LEPSRG
Trigger: TCCCCTCGAGGGCTCCAGGCACTCGGCCAGACCTTC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGGCAAATGCTGGGTTTaGCCCGAAGGTCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREGKCWV*PEGLAE
Trigger: CTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGCGCTGCTGAAGAACTaGTTGAAGGCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYALLKN*LKAGGA
Trigger: GGCCCCGCCGGCCTTCAAGCAGTTCTTCAGCAGCGC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTTGCGCTCAGGCGCGCTaGGATAGGCTTGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSCAQAR*DRLGRC
Trigger: ACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCA...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTTAGCTGGGTCAGGTaGCGGGCCAGGCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLSWVR*RARLLW
Trigger: CCACAAGAGCCTGGCCCGGCACCTGACCCAGCTAAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACGGGAGGACAGATCCTaGCCTTGGCCTGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPREDRS*PWPGHP
Trigger: AGGGTGCCCAGGCCAAGGGCAGGATCTGTCCTCCCG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGACGAGTCCCAGGTaGTGGCATACTGGGTCGACC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLTSPR*WHTGST
Trigger: GGTCGACCCAGTATGCCAGCACCTGGGACTCGTCAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTAACCCTTGGCTGCTGTaGTGTCCCAGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGNPWLL*CPRGWA
Trigger: GGCCCAGCCCCTGGGACAGCACAGCAGCCAAGGGTT...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGAAGAGCGCCGTTTCTaGCAGGCCTGGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHEERRF*QAWVLP
Trigger: GGGCAGCACCCAGGCCTGGCAGAAACGGCGCTCTTC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGAAGAGCGCCGTTTCTaGCAGGCCTGGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALEERRF*QAWVLP
Trigger: GGGCAGCACCCAGGCCTGGCAGAAACGGCGCTCTTC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTTGTCACAGGACTGTaGCCGCCGTGTCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLVTGL*PPCPLG
Trigger: CCCAAGAGGACACGGCGGGCACAGTCCTGTGACAAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGGGTCTGAGTCCTTaGGAGGCACATGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRERGLSP*EAHVEG
Trigger: GCCCTCGACATGTGCCTCGCAAGGACTCAGACCCCT...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCAGGGGTCTGAGTCCTTaGGAGGCACATGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALRGLSP*EAHVEG
Trigger: GCCCTCGACATGTGCCTCGCAAGGACTCAGACCCCT...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCTCTGTTCTAGTCCCTaGCTCCAGCTCCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRELCSSP*LQLPHA
Trigger: GGCATGGGGGAGCTGGAGGCAGGGACTAGAACAGAG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTCTGTTCTAGTCCCTaGCTCCAGCTCCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLCSSP*LQLPHA
Trigger: GGCATGGGGGAGCTGGAGGCAGGGACTAGAACAGAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGGTGCACCAGGGCGTTaGGTTGGGCCAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSGAPGR*VGPGNC
Trigger: ACAGTTTCCTGGCCCAACCCAACGCCCTGGTGCACC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCATGGGAGCAGCAGCCGTaGAGCAGGGCACCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPWEQQP*SRAPRS
Trigger: GCTTCTCGGTGCCCTGCTCCACGGCTGCTGCTCCCA...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTCTCGACCCTTCCTGTaGGAGCAGCTGTTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALSRPFL*EQLLRA
Trigger: GGCTCGCAACAGCTGCTCCCACAGGAAGGGTCGAGA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGACAGCGTCCTTAGCTaGGTCAGGTGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHDSVLS*VRCRAR
Trigger: CCTGGCCCGGCACCTGACCCAGCTAAGGACGCTGTC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGACAGCGTCCTTAGCTaGGTCAGGTGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYDSVLS*VRCRAR
Trigger: CCTGGCCCGGCACCTGACCCAGCTAAGGACGCTGTC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCAGCTCCCCCATGCCTaGTCCTGCCGTCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHQLPHA*SCRLAP
Trigger: AGGGGCAAGACGGCAGGACCAGGCATGGGGGAGCTG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCAGCTCCCCCATGCCTaGTCCTGCCGTCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYQLPHA*SCRLAP
Trigger: AGGGGCAAGACGGCAGGACCAGGCATGGGGGAGCTG...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGGTTGTGGGACAGAGTaGGGGCATGCAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLGCGTE*GHAAHS
Trigger: GCTGTGTGCTGCATGCCCTCACTCTGTCCCACAACC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGGAGCTCGCAGCTGCTaGGATCCAGGTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYGARSC*DPGAGH
Trigger: GTGACCTGCACCTGGATCTCAGCAGCTGCGAGCTCC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACAGTTCCGGGGCACAGTaGCACGCTCCGCCACATTGC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHSSGAQ*HAPPHC
Trigger: GCAATGTGGCGGAGCGTGTCACTGTGCCCCGGAACT...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGCTTTCCATGTCCTaGGGGCTCCCGCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALWLSMS*GLPLMK
Trigger: CTTCATCAGCGGGAGCCCTCAGGACATGGAAAGCCA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTGGCTTTCCATGTCCTaGGGGCTCCCGCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREWLSMS*GLPLMK
Trigger: CTTCATCAGCGGGAGCCCTCAGGACATGGAAAGCCA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAAGGCCCTGCGTCGTCTaGAGAGCGCCGTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPRPCVV*RAPFLP
Trigger: TGGCAGAAACGGCGCTCTTCAGACGACGCAGGGCCT...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTGATGGCAGTCGCATaGTCACCATGCCACGCTCCG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLMAVA*SPCHAP
Trigger: CGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGACAGAGTGAGGGCATaGAGCACACAGCTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALDRVRA*STQLPF
Trigger: GAACGGGAGCTGTGTGCTGCATGCCCTCACTCTGTC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGACAGAGTGAGGGCATaGAGCACACAGCTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSDRVRA*STQLPF
Trigger: GAACGGGAGCTGTGTGCTGCATGCCCTCACTCTGTC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGTGACAGCTCCCAGCTaGTCCTGCAAGGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLVTAPS*SCKAWA
Trigger: AGCCCAAGCCTTGCAGGAGCAGCTGGGAGCTGTCAC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCCCCGATGTCCTCCATaGCATTGCCGCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREPRCPP*HCRSDP
Trigger: TGGATCTGAGCGGCAATGGCATGGAGGACATCGGGG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAGCTCTCCAGGGCCCTTaGGATGTCCAGGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAALQGP*DVQEAQ
Trigger: CTGGGCTTCCTGGACATCGCAAGGGCCCTGGAGAGC...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTGCGCTCAGGCGCGCTaGGATAGGCTTGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLCAQAR*DRLGRC
Trigger: ACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTGCAACCTGAAGGCCTaGTCCTGGGGGCACGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYCNLKA*SWGHVW
Trigger: CCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCATGCAACCTGAAGGCCTaGTCCTGGGGGCACGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPCNLKA*SWGHVW
Trigger: CCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCA...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGTCACCAGGCCCTaGTGCAACCTGAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALVTRP*CNLKAC
Trigger: GCAGGCCTTCAGGTTGCAGCAGGGCCTGGTGACCAG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGCATTTGCTCGGCGCTaGTGGTCACCAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGAFARR*WSPGPA
Trigger: AGCAGGGCCTGGTGACCAGCAGCGCCGAGCAAATGC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCATTTGCTCGGCGCTaGTGGTCACCAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALAFARR*WSPGPA
Trigger: AGCAGGGCCTGGTGACCAGCAGCGCCGAGCAAATGC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAATGTCCTGTCCTaGTTGCTCCAGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLNVLS*LLQQCP
Trigger: GGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTGACGAGTCCCAGGTaGTGGCATACTGGGTCGACC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLTSPR*WHTGST
Trigger: GGTCGACCCAGTATGCCAGCACCTGGGACTCGTCAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACATCCAGGGAGGAGGCTaGTCTCCTCCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHIQGGG*SPPLGS
Trigger: GGAGCCCAGAGGAGGAGAGCAGCCTCCTCCCTGGAT...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGCTCTGACCCCTCAGTaGCCATCTTCCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHALTPQ*PSSGGR
Trigger: CCTTCCGCCGGAAGATGGGCACTGAGGGGTCAGAGC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGGCTCCTCTTGGTCTTaGTGTGAGCTCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSGSSWS*CELSLS
Trigger: GCTGAGGCTGAGCTCACAGCAAGACCAAGAGGAGCC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTTGTCACAGGACTGTaGCCGCCGTGTCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLVTGL*PPCPLG
Trigger: CCCAAGAGGACACGGCGGGCACAGTCCTGTGACAAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCTGGTCCTGCCGTCTTaGCCCTGTAGGACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHLVLPS*PCRTGA
Trigger: AGCCCCTGTCCTACAGGGGCAAGACGGCAGGACCAG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCCCATGCCTGGTCCTaGCGTCTTGCCCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAPHAWS*RLAPVG
Trigger: TCCTACAGGGGCAAGACGGCAGGACCAGGCATGGGG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGTTAAGGAGGAAGAGGTaGAGGCGCCAGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRELRRKR*RRQEVR
Trigger: CCTGACCTCCTGGCGCCTCCACCTCTTCCTCCTTAA...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTTCCTCGATGGGGTTGTaGGACAGAGTGAGGGCATGC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSSSMGL*DRVRAC
Trigger: GCATGCCCTCACTCTGTCCCACAACCCCATCGAGGA...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGTCTGGCCGAGTGCCTaGAGCCCTCGAGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPVWPSA*SPRGEM
Trigger: CATTTCCCCTCGAGGGCTCCAGGCACTCGGCCAGAC...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTTTTGCCCCGAAGGTCTaGCCGAGTGCCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGFAPKV*PSAWSP
Trigger: AGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAA...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTCTCGACCCTTCCTGTaGGAGCAGCTGTTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLSRPFL*EQLLRA
Trigger: GGCTCGCAACAGCTGCTCCCACAGGAAGGGTCGAGA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTGCTCCTGCAAGGCTTaGGCTCCCGCTGAACGGAGC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALCSCKA*APAERS
Trigger: GCTCCGTTCAGCGGGAGCCCAAGCCTTGCAGGAGCA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTGCTCCTGCAAGGCTTaGGCTCCCGCTGAACGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYCSCKA*APAERS
Trigger: GCTCCGTTCAGCGGGAGCCCAAGCCTTGCAGGAGCA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGATGAAGCGCAGCGTGTaGTTGCTCTCCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREMKRSV*LLSRAL
Trigger: AAGGGCCCTGGAGAGCAACCACACGCTGCGCTTCAT...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGCACAGGCCCATCATTaGCCAGCACGTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPAQAHH*PARGPA
Trigger: AGCTGGGCCACGTGCTGGCCAATGATGGGCCTGTGC...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGCACAGGCCCATCATTaGCCAGCACGTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYAQAHH*PARGPA
Trigger: AGCTGGGCCACGTGCTGGCCAATGATGGGCCTGTGC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCCTCGGCCACCCGCATaGCCACAGGGCATAACTCCT +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGPRPPA*PQGITP
Trigger: AGGAGTTATGCCCTGTGGCCATGCGGGTGGCCGAGG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGACAGATCCTGCCCTTaGCCTGGGCACCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPDRSCP*PGHPGG
Trigger: TCCACCAGGGTGCCCAGGCCAAGGGCAGGATCTGTC...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCCACTAGCTGTGGGCTaGCTGCCCCCAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGPLAVG*LPPSPE
Trigger: CTCAGGACTTGGGGGCAGCCAGCCCACAGCTAGTGG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACCACTAGCTGTGGGCTaGCTGCCCCCAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPPLAVG*LPPSPE
Trigger: CTCAGGACTTGGGGGCAGCCAGCCCACAGCTAGTGG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGTTATTGCCGAGGCTTaGGGGGTCTGGGCTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPVIAEA*GVWARG
Trigger: CCCCCTAGCCCAGACCCCCCAAGCCTCGGCAATAAC...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACTCCTGGTCTGGGCCTaGGCCCTCTCGTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPLLVWA*ALSFPI
Trigger: GATGGGAAACGAGAGGGCCCAGGCCCAGACCAGGAG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTCCTGGTCTGGGCCTaGGCCCTCTCGTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALLVWA*ALSFPI
Trigger: GATGGGAAACGAGAGGGCCCAGGCCCAGACCAGGAG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGCACAGCCACTGGCTTaGGAGGCCATGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLAQPLA*EAMELE
Trigger: CTCTAGCTCCATGGCCTCCCAAGCCAGTGGCTGTGC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTGTTCCTGGCTCACTaGTTCCTGTGGGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLFLAH*FLWGQE
Trigger: CTCCTGACCCCACAGGAACCAGTGAGCCAGGAACAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTCCACACTTTCAGCTaGTGGCAGTCGCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREVHTFS*WQSHAH
Trigger: GTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGAC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTGTCCACATCCCATTaGACCTCCTCACGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREVSTSH*TSSRQC
Trigger: ACACTGCCGTGAGGAGGTTCAATGGGATGTGGACAC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGGTTGTGGGACAGAGTaGGGGCATGCAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYGCGTE*GHAAHS
Trigger: GCTGTGTGCTGCATGCCCTCACTCTGTCCCACAACC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGCTGCTGGCTCAGACTaGGAAAACCCTTGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALAAGSD*ENPCPR
Trigger: TCGAGGACAAGGGTTTTCTCAGTCTGAGCCAGCAGC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGACGCAGTCAGTTCCTaGCAGGTCCAGGTGCACCAG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYDAVSS*QVQVHQ
Trigger: CTGGTGCACCTGGACCTGTCAGGAACTGACTGCGTC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGTCGAACCCATTGTCTaGCAGATCCAGGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALVEPIV*QIQAAY
Trigger: GTAGGCAGCCTGGATCTGTCAGACAATGGGTTCGAC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAGTCTGCCACCGACAGTaGCTGCAGGGAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAVCHRQ*LQGTVL
Trigger: GAGGACTGTTCCCTGCAGTCACTGTCGGTGGCAGAC...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGTCTGCCACCGACAGTaGCTGCAGGGAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHVCHRQ*LQGTVL
Trigger: GAGGACTGTTCCCTGCAGTCACTGTCGGTGGCAGAC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCACGGGGAAGGACATaGAGCGCAGCGTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSRGRT*SAACGC
Trigger: GCAACCACACGCTGCGCTTCATGTCCTTCCCCGTGA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCCAGGACCCTTCGGCTaGAGAAGTCCTCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALPGPFG*RSPPAL
Trigger: AAGGGCTGGAGGACTTCTTCAGCCGAAGGGTCCTGG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGGAAGGGCAACACCGTaGACCCTTGGCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALGRATP*TLGCCA
Trigger: AGCACAGCAGCCAAGGGTTCACGGTGTTGCCCTTCC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCTCTGCGCATGGCGCTaGAGCTTGGTTTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRELCAWR*SLVWCF
Trigger: AAAGCACCAAACCAAGCTTCAGCGCCATGCGCAGAG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGGGTGGATAGGGGTCTaGGTCCTTGCGAGGCACATG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYGWIGV*VLARHM
Trigger: CATGTGCCTCGCAAGGACTCAGACCCCTATCCACCC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGTCGCATGCTCACCATaGCACGCTCCGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGVACSP*HAPSPP
Trigger: TGGTGGAGACGGAGCGTGGCATGGTGAGCATGCGAC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACCCCTCTGGGGTGTCTaGGTTTCCACGCCGGATCAA +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPPLWGV*VSTPDQ
Trigger: TTGATCCGGCGTGGAAACGCAGACACCCCAGAGGGG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCGAGGCTCCCCGACTTaGTTAGGGTATGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALRGSPT*LGYVAP
Trigger: AGGTGCTACATACCCTAAGCAAGTCGGGGAGCCTCG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGAGGCTCCCCGACTTaGTTAGGGTATGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSRGSPT*LGYVAP
Trigger: AGGTGCTACATACCCTAAGCAAGTCGGGGAGCCTCG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGGCAAATGCTGGGTTTaGCCCGAAGGTCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYGKCWV*PEGLAE
Trigger: CTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAAGGGAGCTGGCAAATaGTGGGTTTGCCCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREKGAGK*WVCPEG
Trigger: ACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTT...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGTGACAGCTCCCAGCTaGTCCTGCAAGGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALVTAPS*SCKAWA
Trigger: AGCCCAAGCCTTGCAGGAGCAGCTGGGAGCTGTCAC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTGTCCTCCATGCCATTaGCGCTCAGATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRECPPCH*RSDPPW
Trigger: CCAAGGTGGATCTGAGCGGCAATGGCATGGAGGACA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTATGTCCTGTCCTGCTTaGTCCAGCAGTGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGMSCPA*SSSAPR
Trigger: CCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACAT...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATATGTCCTGTCCTGCTTaGTCCAGCAGTGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYMSCPA*SSSAPR
Trigger: CCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACAT...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCCACCGCAGACACTGTaGGTGGTAGATGTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALPPQTL*VVDVEV
Trigger: GACTTCCACATCTACCACCCACAGTGTCTGCGGTGG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGACCCCGGCCAGCTTCTaGACAAAGTCCGTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRETPASF*TKSVLS
Trigger: GCTTAAGACGGACTTTGTCCAGAAGCTGGCCGGGGT...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTAACTGTAGAGGGCATTaGCCTCATCCGTGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSNCRGH*PHPWRG
Trigger: TCCTCGCCACGGATGAGGCCAATGCCCTCTACAGTT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAGGTGCACCAGGGCGTTaGGTTGGGCCAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAGAPGR*VGPGNC
Trigger: ACAGTTTCCTGGCCCAACCCAACGCCCTGGTGCACC...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGGGCACGTCTGGGAGTaGTTGTTCCTCACTAAGCAC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREGHVWE*LFLTKH
Trigger: GTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCCAGCTCATAGAGGCTaGGAAACAGCGCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHPAHRG*ETAPGS
Trigger: ACTCCCGGGCGCTGTTTCCCAGCCTCTATGAGCTGG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACCAGCTCATAGAGGCTaGGAAACAGCGCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPPAHRG*ETAPGS
Trigger: ACTCCCGGGCGCTGTTTCCCAGCCTCTATGAGCTGG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACAGGTGCTGGCATACTaGGTCGACCAGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPQVLAY*VDQVLE
Trigger: CTCCAGGACCTGGTCGACCCAGTATGCCAGCACCTG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTTCATCCAGGCGGGTaGCCATCCCATTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLHPGG*PSHSPD
Trigger: GTCAGGAGAATGGGATGGCCACCCGCCTGGATGAAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGGACTCTGGCAGCTGTaGTTGGGGGCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLGLWQL*LGALSS
Trigger: TGAAGAGAGTGCCCCCAACCACAGCTGCCAGAGTCC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCCTCTTCCCCATCTTaGGAGGCTGGGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSSSPS*EAGLGL
Trigger: GAGTCCCAGCCCAGCCTCCCAAGATGGGGAAGAGGA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATCCTCTTCCCCATCTTaGGAGGCTGGGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQASSSPS*EAGLGL
Trigger: GAGTCCCAGCCCAGCCTCCCAAGATGGGGAAGAGGA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTGGAAGTGTCCTCTCTaGGAAGAGGGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREWKCPL*EEGPLL
Trigger: AAGGAGGGGACCCTCTTCCCAGAGAGGACACTTCCA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGAAGTGTCCTCTCTaGGAAGAGGGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALWKCPL*EEGPLL
Trigger: AAGGAGGGGACCCTCTTCCCAGAGAGGACACTTCCA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCACAGCCACTGGCTTaGGAGGCCATGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALAQPLA*EAMELE
Trigger: CTCTAGCTCCATGGCCTCCCAAGCCAGTGGCTGTGC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGGGTTTGTTGACTCCTaGAGCTGCATCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREGFVDS*SCISSL
Trigger: GAGGCTGGAGATGCAGCTCCAGGAGTCAACAAACCC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGACTTCGGGCTCCTCTTaGTCTTGCTGTGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRETSGSS*SCCELS
Trigger: GCTGAGCTCACAGCAAGACCAAGAGGAGCCCGAAGT...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCTCACTGGTTCCTGTaGGGTCAGGAGGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALAHWFL*GQEAVF
Trigger: GAAGACGGCCTCCTGACCCCACAGGAACCAGTGAGC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGCTCACTGGTTCCTGTaGGGTCAGGAGGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGAHWFL*GQEAVF
Trigger: GAAGACGGCCTCCTGACCCCACAGGAACCAGTGAGC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGGTCTCCAACTTCACATaGTGTTGTTGGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREVSNFT*CCWSTA
Trigger: GGCCGTGCTCCAACAACATCATGTGAAGTTGGAGAC...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGGATCTCCAGGACATTaGAGGAGCTCTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLGSPGH*RSSPPW
Trigger: CCAAGGTGGAGAGCTCCTTCAATGTCCTGGAGATCC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGTGTCCACATCCCATTaGACCTCCTCACGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLVSTSH*TSSRQC
Trigger: ACACTGCCGTGAGGAGGTTCAATGGGATGTGGACAC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCGAGAAGCAAGTCGATaGCGCAGTCAGTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREREASR*RSQFLT
Trigger: TGTCAGGAACTGACTGCGTCATCGACTTGCTTCTCG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCACCTCACTTGCTACTaGTTCCAGCCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHHLTCY*FQPLPH
Trigger: GTGCGGCAGAGGCTGGAATCAGTAGCAAGTGAGGTG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGGAGCCCAGGATTCTTaGTCAGGTCCAGGTATCGAA +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREGAQDS*SGPGIE
Trigger: TTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTTGTTCTTGCCAAGTaGAGGCACCAGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLVLAK*RHQCQE
Trigger: CTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTTGTTCTTGCCAAGTaGAGGCACCAGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLVLAK*RHQCQE
Trigger: CTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCCCCGATGTCCTCCATaGCATTGCCGCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALPRCPP*HCRSDP
Trigger: TGGATCTGAGCGGCAATGGCATGGAGGACATCGGGG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACACCATTGGATCTTCTaGCAGACGTCCTCGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAHHWIF*QTSSVR
Trigger: GCGCACCGAGGACGTCTGGCAGAAGATCCAATGGTG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCACCATTGGATCTTCTaGCAGACGTCCTCGGTGCGC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALHHWIF*QTSSVR
Trigger: GCGCACCGAGGACGTCTGGCAGAAGATCCAATGGTG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCACGCTCCGCCACATTaGTCAGCATCTTGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSHAPPH*SASCCV
Trigger: GACACAACAAGATGCTGAGCAATGTGGCGGAGCGTG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTGCTTGCTCCAGCAGTaGCCCTCGGATGAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYCLLQQ*PSDEVP
Trigger: CGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCATGCTTGCTCCAGCAGTaGCCCTCGGATGAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPCLLQQ*PSDEVP
Trigger: CGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCA...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCTGAATGTCCTGTCCTaGTTGCTCCAGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGLNVLS*LLQQCP
Trigger: GGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGACACCGGCCGAATCTTaGGGCAGCGTTTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRETPAES*GSVSAF
Trigger: AAAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGT...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTCTCTTCAGCTATGTaGCATGTGGCCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLSSAM*HVASAL
Trigger: CAGAGCAGAGGCCACATGGCACATAGCTGAAGAGAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGGCTCCTCTTGGTCTTaGTGTGAGCTCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHGSSWS*CELSLS
Trigger: GCTGAGGCTGAGCTCACAGCAAGACCAAGAGGAGCC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCCACCGCAGACACTGTaGGTGGTAGATGTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLPPQTL*VVDVEV
Trigger: GACTTCCACATCTACCACCCACAGTGTCTGCGGTGG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGGTATCGAAGGGAGCTaGCAAATGCTGGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLGIEGS*QMLGLP
Trigger: GGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTAGCTGCACCAGCTTGTaGAGGATCTCCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGSCTSL*RISSRV
Trigger: GACCCTGGAGGAGATCCTCCACAAGCTGGTGCAGCT...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATAGCTGCACCAGCTTGTaGAGGATCTCCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYSCTSL*RISSRV
Trigger: GACCCTGGAGGAGATCCTCCACAAGCTGGTGCAGCT...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATATGAAGCGCAGCGTGTaGTTGCTCTCCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYMKRSV*LLSRAL
Trigger: AAGGGCCCTGGAGAGCAACCACACGCTGCGCTTCAT...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCCTGGGGGCACGTCTaGGAGTGGTTGTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSWGHV*EWLFLT
Trigger: AGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATCCTGGGGGCACGTCTaGGAGTGGTTGTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQASWGHV*EWLFLT
Trigger: AGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCTTCATCCAGGCGGGTaGCCATCCCATTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGLHPGG*PSHSPD
Trigger: GTCAGGAGAATGGGATGGCCACCCGCCTGGATGAAG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAAACACCGTGAACCCTTaGCTGCTGTGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQANTVNP*LLCCPR
Trigger: CCTGGGACAGCACAGCAGCCAAGGGTTCACGGTGTT...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATAACACCGTGAACCCTTaGCTGCTGTGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYNTVNP*LLCCPR
Trigger: CCTGGGACAGCACAGCAGCCAAGGGTTCACGGTGTT...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACATGGCGCTGAAGCTTaGTTTGGTGCTTTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPHGAEA*FGALGR
Trigger: CCGCCCCAAAGCACCAAACCAAGCTTCAGCGCCATG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCATGGCGCTGAAGCTTaGTTTGGTGCTTTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHHGAEA*FGALGR
Trigger: CCGCCCCAAAGCACCAAACCAAGCTTCAGCGCCATG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGGACTCTGGCAGCTGTaGTTGGGGGCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGGLWQL*LGALSS
Trigger: TGAAGAGAGTGCCCCCAACCACAGCTGCCAGAGTCC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTTCCTGGCTCACTaGTTCCTGTGGGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALFLAH*FLWGQE
Trigger: CTCCTGACCCCACAGGAACCAGTGAGCCAGGAACAG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTTGTCAGTCTGTTCCTaGCTCACTGGTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRELSVCS*LTGSCG
Trigger: CCCACAGGAACCAGTGAGCCAGGAACAGACTGACAA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAGGAGGGTGTTGTaGCAGTTGTCAGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLRRVL*QLSVCS
Trigger: GGAACAGACTGACAACTGCCACAACACCCTCCTCAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGGATCTCCAGGACATTaGAGGAGCTCTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHGSPGH*RSSPPW
Trigger: CCAAGGTGGAGAGCTCCTTCAATGTCCTGGAGATCC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGTCCACACTTTCAGCTaGTGGCAGTCGCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALVHTFS*WQSHAH
Trigger: GTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGAC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGTAGAGTTTGGTaGACCACTGGTTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALCSRVW*TTGCRP
Trigger: TGGCCTACAACCAGTGGTTCACCAAACTCTACTGCA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGCTGCTGGCTCAGACTaGGAAAACCCTTGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHAAGSD*ENPCPR
Trigger: TCGAGGACAAGGGTTTTCTCAGTCTGAGCCAGCAGC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTTGTGGCCGACAGATTaGCGTGGCTCAGTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHLWPTD*RGSVCR
Trigger: CCTACACACTGAGCCACGTCAATCTGTCGGCCACAA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCATTGTGGCCGACAGATTaGCGTGGCTCAGTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPLWPTD*RGSVCR
Trigger: CCTACACACTGAGCCACGTCAATCTGTCGGCCACAA...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGTCGAACCCATTGTCTaGCAGATCCAGGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALVEPIV*QIQAAY
Trigger: GTAGGCAGCCTGGATCTGTCAGACAATGGGTTCGAC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCTGGTTAGGTAGGTaGCGACTGAGAGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRESWLGR*RLRASL
Trigger: AAGTGAAGCTCTCAGTCGTCACCTACCTAACCAGCT...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCTCTGCGCATGGCGCTaGAGCTTGGTTTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHLCAWR*SLVWCF
Trigger: AAAGCACCAAACCAAGCTTCAGCGCCATGCGCAGAG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAAAGGGAGCTGGCAAATaGTGGGTTTGCCCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAKGAGK*WVCPEG
Trigger: ACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTT...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCCTCCATGCCATTaGCGCTCAGATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHCPPCH*RSDPPW
Trigger: CCAAGGTGGATCTGAGCGGCAATGGCATGGAGGACA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGACTCCAGGATCACCTaGAGCTCCTTGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYDSRIT*SSLSTA
Trigger: AGCTGTGGACAAGGAGCTGCAGGTGATCCTGGAGTC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAGACTCCAGGATCACCTaGAGCTCCTTGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQADSRIT*SSLSTA
Trigger: AGCTGTGGACAAGGAGCTGCAGGTGATCCTGGAGTC...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTTGCGGCAGCGTTTCTaGTTTTTGATGGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRELRQRF*FLMAMV
Trigger: CACCATGGCCATCAAAAAGCAGAAACGCTGCCGCAA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGACACCGGCCGAATCTTaGGGCAGCGTTTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLTPAES*GSVSAF
Trigger: AAAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAACCCCGGCCAGCTTCTaGACAAAGTCCGTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQATPASF*TKSVLS
Trigger: GCTTAAGACGGACTTTGTCCAGAAGCTGGCCGGGGT...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGGTATCGAAGGGAGCTaGCAAATGCTGGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHGIEGS*QMLGLP
Trigger: GGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAAACTGTAGAGGGCATTaGCCTCATCCGTGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQANCRGH*PHPWRG
Trigger: TCCTCGCCACGGATGAGGCCAATGCCCTCTACAGTT...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGAACAGTCCTCTTCCTaGATCAGCTGCACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLEQSSS*ISCTSL
Trigger: CAAGCTGGTGCAGCTGATCCAGGAAGAGGACTGTTC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTCACTAAGCACCATTaGATCTTCTGCCAGACGTCC +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSLTKHH*IFCQTS
Trigger: GGACGTCTGGCAGAAGATCCAATGGTGCTTAGTGAG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGGGCACGTCTGGGAGTaGTTGTTCCTCACTAAGCAC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALGHVWE*LFLTKH
Trigger: GTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAAGCTCCAACCCTTaGCTCTTTCCAACCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYRSSNP*LFPTRE
Trigger: TTCCCGGGTTGGAAAGAGCCAAGGGTTGGAGCTTCG...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCGAAGCTCCAACCCTTaGCTCTTTCCAACCCGGGAA +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGRSSNP*LFPTRE
Trigger: TTCCCGGGTTGGAAAGAGCCAAGGGTTGGAGCTTCG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTCTGGCAGCTGTGGTTaGGGGCACTCTCTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYSGSCG*GHSLQL
Trigger: TAGCTGAAGAGAGTGCCCCCAACCACAGCTGCCAGA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTCTGGCAGCTGTGGTTaGGGGCACTCTCTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHSGSCG*GHSLQL
Trigger: TAGCTGAAGAGAGTGCCCCCAACCACAGCTGCCAGA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCTTGGCATTCCTAGCTaGAAGTGTCCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCRELGIPS*KCPLWE
Trigger: TTCCCAGAGAGGACACTTCCAGCTAGGAATGCCAAG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGGGTTTGTTGACTCCTaGAGCTGCATCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALGFVDS*SCISSL
Trigger: GAGGCTGGAGATGCAGCTCCAGGAGTCAACAAACCC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGTCTCCAACTTCACATaGTGTTGTTGGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALVSNFT*CCWSTA
Trigger: GGCCGTGCTCCAACAACATCATGTGAAGTTGGAGAC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACGAGAAGCAAGTCGATaGCGCAGTCAGTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPREASR*RSQFLT
Trigger: TGTCAGGAACTGACTGCGTCATCGACTTGCTTCTCG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCCAAAAACAGGTGCTTaGGGGACTTGTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREPKTGA*GTCSCQ
Trigger: TTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTCATCCAGCTTGTTCTaGATGTCCTGTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLSSSLF*MSCPAC
Trigger: GCAAGCAGGACAGGACATTCAGAACAAGCTGGATGA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGGAGCCCAGGATTCTTaGTCAGGTCCAGGTATCGAA +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALGAQDS*SGPGIE
Trigger: TTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAGGGAGGAGTTTATCTaGAGGGCCTTAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLREEFI*RALDSI
Trigger: GATGCTGTCTAAGGCCCTGCAGATAAACTCCTCCCT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCACGCTCCGCCACATTaGTCAGCATCTTGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHHAPPH*SASCCV
Trigger: GACACAACAAGATGCTGAGCAATGTGGCGGAGCGTG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCTCTCTTCAGCTATGTaGCATGTGGCCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGLSSAM*HVASAL
Trigger: CAGAGCAGAGGCCACATGGCACATAGCTGAAGAGAG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGAACAGTCCTCTTCCTaGATCAGCTGCACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYEQSSS*ISCTSL
Trigger: CAAGCTGGTGCAGCTGATCCAGGAAGAGGACTGTTC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTTGTCAGTCTGTTCCTaGCTCACTGGTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLSVCS*LTGSCG
Trigger: CCCACAGGAACCAGTGAGCCAGGAACAGACTGACAA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACTGAGGAGGGTGTTGTaGCAGTTGTCAGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLQREVSRQALTASVSPLRRVL*QLSVCS
Trigger: GGAACAGACTGACAACTGCCACAACACCCTCCTCAG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTGCAGTAGAGTTTGGTaGACCACTGGTTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYCSRVW*TTGCRP
Trigger: TGGCCTACAACCAGTGGTTCACCAAACTCTACTGCA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCATCCAGCTTGTTCTaGATGTCCTGTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSSSLF*MSCPAC
Trigger: GCAAGCAGGACAGGACATTCAGAACAAGCTGGATGA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATAGCTGGTTAGGTAGGTaGCGACTGAGAGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYSWLGR*RLRASL
Trigger: AAGTGAAGCTCTCAGTCGTCACCTACCTAACCAGCT...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGAGCGTTTCTGCTTTTTaGTGGCCATGGTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRESVSAF*WPWCQC
Trigger: ACATTGACACCATGGCCATCAAAAAGCAGAAACGCT...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTTGCCCAAAAACAGGTaGTTGAGGGACTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRELPKNR*LRDLFL
Trigger: CAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTAGGGAGGAGTTTATCTaGAGGGCCTTAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGREEFI*RALDSI
Trigger: GATGCTGTCTAAGGCCCTGCAGATAAACTCCTCCCT...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATTGCGGCAGCGTTTCTaGTTTTTGATGGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALRQRF*FLMAMV
Trigger: CACCATGGCCATCAAAAAGCAGAAACGCTGCCGCAA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTTCAGCATGGTAGATaGTGTCCACATCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLQHGR*CPHPIE
Trigger: TTCAATGGGATGTGGACACCATCTACCATGCTGAAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTTCTCGGCTCTCCAAGTaGCTGAAATCCAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSSRLSK*LKSKRL
Trigger: CAATCTTTTGGATTTCAGCCACTTGGAGAGCCGAGA...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTCACTAAGCACCATTaGATCTTCTGCCAGACGTCC +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALTKHH*IFCQTS
Trigger: GGACGTCTGGCAGAAGATCCAATGGTGCTTAGTGAG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCAAGTTCATCATCTGTaGTCTCCTCATGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: STLLGEEISPHPEALCREQVHHL*SPHGHG
Trigger: ACCATGACCATGAGGAGACCACAGATGATGAACTTG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCAAGTTCATCATCTGTaGTCTCCTCATGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: GQRSTLLGEEISPHPEALQVHHL*SPHGHG
Trigger: ACCATGACCATGAGGAGACCACAGATGATGAACTTG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCATGGTGTCAATGTTaGTCCCAAGTTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSPWCQC*SQVHHL
Trigger: CAGATGATGAACTTGGGACCAACATTGACACCATGG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCTTGGCATTCCTAGCTaGAAGTGTCCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGLGIPS*KCPLWE
Trigger: TTCCCAGAGAGGACACTTCCAGCTAGGAATGCCAAG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACACATGTCGTGTCACCTaGTCCACACTTTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: EISPHPEALCRERYRGRHTCRVT*STLSAD
Trigger: ATCAGCTGAAAGTGTGGACCAGGTGACACGACATGT...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTACATGTCGTGTCACCTaGTCCACACTTTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGTCRVT*STLSAD
Trigger: ATCAGCTGAAAGTGTGGACCAGGTGACACGACATGT...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGTTTGTAACCATGAGTaGGCAGCTCAGATAGACCTT +
Preference number: 4 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLVCNHE*AAQIDL
Trigger: AAGGTCTATCTGAGCTGCCCACTCATGGTTACAAAC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR TCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAAGCGTTTCTGCTTTTTaGTGGCCATGGTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQASVSAF*WPWCQC
Trigger: ACATTGACACCATGGCCATCAAAAAGCAGAAACGCT...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR GCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTTTGCCCAAAAACAGGTaGTTGAGGGACTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGLPKNR*LRDLFL
Trigger: CAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAA...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGGTCCTCAAACTTCTTaGGCTTTGTCTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGGPQTS*ALSPTS
Trigger: TGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCTTCAGCATGGTAGATaGTGTCCACATCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: SLQREVSRQALTASVSPGLQHGR*CPHPIE
Trigger: TTCAATGGGATGTGGACACCATCTACCATGCTGAAG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTCTCGGCTCTCCAAGTaGCTGAAATCCAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: LLGEEISPHPEALCRERYSRLSK*LKSKRL
Trigger: CAATCTTTTGGATTTCAGCCACTTGGAGAGCCGAGA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCATGGTGTCAATGTTaGTCCCAAGTTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAPWCQC*SQVHHL
Trigger: CAGATGATGAACTTGGGACCAACATTGACACCATGG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CCA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAGTTTGTAACCATGAGTaGGCAGCTCAGATAGACCTT +
Preference number: 4 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAVCNHE*AAQIDL
Trigger: AAGGTCTATCTGAGCTGCCCACTCATGGTTACAAAC...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 90 bp GGGCCGGCGAAAGTGAAACAGGCCCCGGCGCCTCTTCTTCTGGAGTaGAGGCAGCGGTGCCTCCGAGAGTCCTGGCCGCACGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GPAKVKQAPAPLLLE*RQRCLRESWPHGPQ
Trigger: CTGAGGACCGTGCGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTCCAGAAGAAGAGGCGCCGGGGCCTGTTTCACTTTCGCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS GCA 90 bp GTGAAACAGGCCCCGGCGCCTCTTCTTCTGGAGTGGAGGCAGCGGTaGCTCCGAGAGTCCTGGCCGCACGGTCCTCAGAGTCCGGGGGTA +
Preference number: 5 (lower is better)
Translates to: VKQAPAPLLLEWRQR*LRESWPHGPQSPGV
Trigger: TACCCCCGGACTCTGAGGACCGTGCGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTCCAGAAGAAGAGGCGCCGGGGCCTGTTTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS GCA 90 bp TGCACAGGCTCCAGGGGGCATAGTCTCAGGGCCCGCACCTCCTCCTaGACTCGTCCACACAGCCGCTGCAGCATTTGCTCGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CTGSRGHSLRARTSS*TRPHSRCSICSALL
Trigger: CAGCAGCGCCGAGCAAATGCTGCAGCGGCTGTGTGGACGAGTGCAGGAGGAGGTGCGGGCCCTGAGACTATGCCCCCTGGAGCCTGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp GTGGCCTCTGCTCTGCGCATGGCGCTGAAGCTTGGTTTGGTGCTTTaGGGCGGTGGTGGGGGCTTCCAGGATCCAGGCCCTGCGTCGTCT +
Preference number: 5 (lower is better)
Translates to: VASALRMALKLGLVL*GGGGGFQDPGPASS
Trigger: AGACGACGCAGGGCCTGGATCCTGGAAGCCCCCACCACCGCCCCAAAGCACCAAACCAAGCTTCAGCGCCATGCGCAGAGCAGAGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACAGCTCCACGCTGGGCTaGGCCATGGCGGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHSSTLG*AMAAAA
Trigger: AGCAGCGGCCGCCATGGCCAAGCCCAGCGTGGAGCT...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp GACAGATCCAGGCTGCCTACACAGGTGACAGCTCCCAGCTGCTCCTaGAAGGCTTGGGCTCCCGCTGAACGGAGCTCGCAGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: DRSRLPTQVTAPSCS*KAWAPAERSSQLLR
Trigger: TCTCAGCAGCTGCGAGCTCCGTTCAGCGGGAGCCCAAGCCTTGCAGGAGCAGCTGGGAGCTGTCACCTGTGTAGGCAGCCTGGATCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 90 bp CGGCCTGGATCAGGGGGCCCTTGGACTTCGGGCTCCTCTTGGTCTTaGTGTGAGCTCAGCCTCAGCCGGGGTTTGTTGACTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: RPGSGGPWTSGSSWS*CELSLSRGLLTPGA
Trigger: AGCTCCAGGAGTCAACAAACCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGAGGAGCCCGAAGTCCAAGGGCCCCCTGATCCAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp GCGCTGCTGGTCACCAGGCCCTGCTGCAACCTGAAGGCCTGCTCCTaGGGGCACGTCTGGGAGTGGTTGTTCCTCACTAAGCACCATTGG +
Preference number: 5 (lower is better)
Translates to: ALLVTRPCCNLKACS*GHVWEWLFLTKHHW
Trigger: CCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCAGCAGGGCCTGGTGACCAGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS-3UTR CAA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTCTCCAGGGCCCTaGCGATGTCCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: GQRSTLLGEEISPHPEALCSPGP*RCPGSP
Trigger: TGGGCTTCCTGGACATCGCAAGGGCCCTGGAGAGCA...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp CCTCGGCCACCCGCATGGCCACAGGGCATAACTCCTGTGTCAGGCTaGCCATGGACTCCAGGATCACCTAGTATGGGGGAAAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PRPPAWPQGITPVSG*PWTPGSPSMGEREA
Trigger: GGCCTCCCTTTCCCCCATACTAGGTGATCCTGGAGTCCATGGTCAGCCTGACACAGGAGTTATGCCCTGTGGCCATGCGGGTGGCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS GCA 90 bp CCCAGGATTCTTGCTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATaGTGGGTTTGCCCCGAAGGTCTGGCCGAGTGCCTGGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PRILAQVQVSKGAGK*WVCPEGLAECLEPS
Trigger: CGAGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp TTGTCTGACAGATCCAGGCTGCCTACACAGGTGACAGCTCCCAGCTaGTCCTGCAAGGCTTGGGCTCCCGCTGAACGGAGCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LSDRSRLPTQVTAPS*SCKAWAPAERSSQL
Trigger: CAGCTGCGAGCTCCGTTCAGCGGGAGCCCAAGCCTTGCAGGAGCAGCTGGGAGCTGTCACCTGTGTAGGCAGCCTGGATCTGTCAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp GGTCTGGGCCTGGGCCCTCTCGTTTCCCATCGAAGCTCCAACCCTTaGCTCTTTCCAACCCGGGAAGGGCAACACCGTGAACCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GLGLGPLVSHRSSNP*LFPTREGQHREPLA
Trigger: AGCCAAGGGTTCACGGTGTTGCCCTTCCCGGGTTGGAAAGAGCCAAGGGTTGGAGCTTCGATGGGAAACGAGAGGGCCCAGGCCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp GGGGTCCCTGGGCTAGGAAGGCAGATGCACAGGGCAGGGCTGTCATaGCTTAGCATGGTCGGCCTTCTTGGGTTCTCCAGACTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: GVPGLGRQMHRAGLS*LSMVGLLGFSRLQG
Trigger: CCCCTGAAGTCTGGAGAACCCAAGAAGGCCGACCATGCTAAGCCATGACAGCCCTGCCCTGTGCATCTGCCTTCCTAGCCCAGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTTGGAGCACGGCCCCTaGGCTCAGGCACCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYLEHGP*AQAPPD
Trigger: ATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATTGGAGCACGGCCCCTaGGCTCAGGCACCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALEHGP*AQAPPD
Trigger: ATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAGGTGCACCAGGGCGTaGGGTTGGGCCAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLRCTRA*GWARKL
Trigger: CAGTTTCCTGGCCCAACCCAACGCCCTGGTGCACCT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTGCTGAAGAACTGCTaGAAGGCCGGCGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLLKNC*KAGGAS
Trigger: AGAGGCCCCGCCGGCCTTCAAGCAGTTCTTCAGCAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCGCGCTGCGATAGGCTaGGGAGATGTCGCTCACGGG +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALRAAIG*GDVAHG
Trigger: CCCGTGAGCGACATCTCCCAAGCCTATCGCAGCGCG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCAGCCGCTGCAGCATTaGCTCGGCGCTGCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALQPLQH*LGAAGH
Trigger: GTGACCAGCAGCGCCGAGCAAATGCTGCAGCGGCTG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACAGCCGCTGCAGCATTaGCTCGGCGCTGCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPQPLQH*LGAAGH
Trigger: GTGACCAGCAGCGCCGAGCAAATGCTGCAGCGGCTG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGCGCTGAAGCTTGGTTaGGTGCTTTGGGGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSALKLG*VLWGGG
Trigger: ACCACCGCCCCAAAGCACCAAACCAAGCTTCAGCGC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp GTGGAGCAGGGCACCGAGAAGCAAGTCGATGACGCAGTCAGTTCCTaGCAGGTCCAGGTGCACCAGGGCGTTGGGTTGGGCCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: VEQGTEKQVDDAVSS*QVQVHQGVGLGQET
Trigger: AGTTTCCTGGCCCAACCCAACGCCCTGGTGCACCTGGACCTGTCAGGAACTGACTGCGTCATCGACTTGCTTCTCGGTGCCCTGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp CTTGCTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATGCTGGGTTTaGCCCGAAGGTCTGGCCGAGTGCCTGGAGCCCTCGAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LAQVQVSKGAGKCWV*PEGLAECLEPSRGN
Trigger: ATTTCCCCTCGAGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp CAGGAGGACCCCTGCCTCACTGAGTCCCTAGCCACGGGGAAGCCCTaGAGAGACCCTCTGAAGAGTCCTTCCAACGCCTGCATTCGCATA +
Preference number: 5 (lower is better)
Translates to: QEDPCLTESLATGKP*RDPLKSPSNACIRI
Trigger: TATGCGAATGCAGGCGTTGGAAGGACTCTTCAGAGGGTCTCTGCAGGGCTTCCCCGTGGCTAGGGACTCAGTGAGGCAGGGGTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CCA 90 bp AGGATTCTTGCTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATGCTaGGTTTGCCCCGAAGGTCTGGCCGAGTGCCTGGAGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RILAQVQVSKGAGKC*VCPEGLAECLEPSR
Trigger: CCTCGAGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 90 bp CGAGGAGCCCAGGATTCTTGCTCAGGTCCAGGTATCGAAGGGAGCTaGCAAATGCTGGGTTTGCCCCGAAGGTCTGGCCGAGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RGAQDSCSGPGIEGS*QMLGLPRRSGRVPG
Trigger: TCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCCTCCGGATGCTGTCTaGCAACTCGCGGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYPPDAV*QLAGEL
Trigger: GAGCTCACCCGCGAGTTGCAAGACAGCATCCGGAGG...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCCTCCGGATGCTGTCTaGCAACTCGCGGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHPPDAV*QLAGEL
Trigger: GAGCTCACCCGCGAGTTGCAAGACAGCATCCGGAGG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTAAGGAGCTCTCCACCTaGGCCGGGACTTTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSKELST*AGTLRR
Trigger: CCTCCTTAAAGTCCCGGCCAAGGTGGAGAGCTCCTT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTGGAAGTCTCAGAGTaGGGGGATGTATCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREVEVSE*GDVSRG
Trigger: GCCCCGAGATACATCCCCCAACTCTGAGACTTCCAC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGTGGAAGTCTCAGAGTaGGGGGATGTATCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSVEVSE*GDVSRG
Trigger: GCCCCGAGATACATCCCCCAACTCTGAGACTTCCAC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGGTGTCCACATCCCATaGAACCTCCTCACGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREGVHIP*NLLTAV
Trigger: CACTGCCGTGAGGAGGTTCAATGGGATGTGGACACC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCTGCTGAAGAACTGCTaGAAGGCCGGCGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLLKNC*KAGGAS
Trigger: AGAGGCCCCGCCGGCCTTCAAGCAGTTCTTCAGCAG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGTTGCTGCCCAGGGCATaGATGAGGATGCTGGTGCGA +
Preference number: 5 (lower is better)
Translates to: STLLGEEISPHPEALCRELLPRA*MRMLVR
Trigger: TCGCACCAGCATCCTCATCAATGCCCTGGGCAGCAA...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGCCTTAGACAGCATCTaGGCCCCGATGTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSALDSI*APMSSM
Trigger: CATGGAGGACATCGGGGCCAAGATGCTGTCTAAGGC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATGCTCTCCAGGGCCCTaGCGATGTCCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: GDKPPPRSSLQREVSRQACSPGP*RCPGSP
Trigger: TGGGCTTCCTGGACATCGCAAGGGCCCTGGAGAGCA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTAGCGCCCGGGAGTTCTaGGCATCTTTGATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSSAREF*ASLMRS
Trigger: GGACCTCATCAAAGATGCCAAGAACTCCCGGGCGCT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTTGCTCAGCATCTTGTaGTGTCCCTCGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLLSIL*CPSATR
Trigger: GCGGGTGGCCGAGGGACACAACAAGATGCTGAGCAA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGACACCGGCCGAATCTaGCGGCAGCGTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSDTGRI*RQRFCF
Trigger: AAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGTC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCCCCAGATTCCCCAGTaGGCTTTCCATGTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: STLLGEEISPHPEALCREPQIPQ*AFHVLR
Trigger: CCTCAGGACATGGAAAGCCAACTGGGGAATCTGGGG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGTCGAAGCTCCAACCCTaGGCTCTTTCCAACCCGGGA +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRESKLQP*ALSNPG
Trigger: TCCCGGGTTGGAAAGAGCCAAGGGTTGGAGCTTCGA...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGCTTGGTTTGGTGCTTaGGGGCGGTGGTGGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYAWFGA*GRWWGL
Trigger: AAGCCCCCACCACCGCCCCAAAGCACCAAACCAAGC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCTTGGTTTGGTGCTTaGGGGCGGTGGTGGGGGCTT +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALAWFGA*GRWWGL
Trigger: AAGCCCCCACCACCGCCCCAAAGCACCAAACCAAGC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGCGGGGTCCTGTAGCTaGGCATTCCTAGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSAGSCS*AFLAGS
Trigger: ACTTCCAGCTAGGAATGCCAAGCTACAGGACCCCGC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCTCAGCCGGGGTTTGTaGACTCCTGGAGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GQRSTLLGEEISPHPEALLSRGL*TPGAAS
Trigger: AGATGCAGCTCCAGGAGTCAACAAACCCCGGCTGAG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATTGGATCAGGGGGCCCTaGGACTTCGGGCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYWIRGP*DFGLLL
Trigger: CAAGAGGAGCCCGAAGTCCAAGGGCCCCCTGATCCA...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATGGATCAGGGGGCCCTaGGACTTCGGGCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GDKPPPRSSLQREVSRQAWIRGP*DFGLLL
Trigger: CAAGAGGAGCCCGAAGTCCAAGGGCCCCCTGATCCA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTGGGCTGAGGAGGGTGTaGTGGCAGTTGTCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSGLRRV*WQLSVC
Trigger: ACAGACTGACAACTGCCACAACACCCTCCTCAGCCC...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp CAGGGCAGAGCTCACATGTCGTGTCACCTGGTCCACACTTTCAGCTaGTGGCAGTCGCATGCTCACCATGCCACGCTCCGTCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: QGRAHMSCHLVHTFS*WQSHAHHATLRLHQ
Trigger: CTGGTGGAGACGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGACACGACATGTGAGCTCTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp TCACTCCAGCTTGTTCTGAATGTCCTGTCCTGCTTGCTCCAGCAGTaGCCCTCGGATGAAGTTCCGGGGCACAGTGACACGCTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: SLQLVLNVLSCLLQQ*PSDEVPGHSDTLRH
Trigger: GTGGCGGAGCGTGTCACTGTGCCCCGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561354.1
ENST00000644899.1
CDS CCA 90 bp TTGAAGGAGCTCTCCACCTTGGCCGGGACTTTAAGGAGGAAGAGGTaGAGGCGCCAGGAGGTCAGGGCCAGCACTCGGTCCTCAAACTTC +
Preference number: 5 (lower is better)
Translates to: LKELSTLAGTLRRKR*RRQEVRASTRSSNF
Trigger: GAAGTTTGAGGACCGAGTGCTGGCCCTGACCTCCTGGCGCCTCCACCTCTTCCTCCTTAAAGTCCCGGCCAAGGTGGAGAGCTCCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 90 bp CCCTGCTGCAACCTGAAGGCCTGCTCCTGGGGGCACGTCTGGGAGTaGTTGTTCCTCACTAAGCACCATTGGATCTTCTGCCAGACGTCC +
Preference number: 5 (lower is better)
Translates to: PCCNLKACSWGHVWE*LFLTKHHWIFCQTS
Trigger: GGACGTCTGGCAGAAGATCCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCAGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp ACCAGGCCCTGCTGCAACCTGAAGGCCTGCTCCTGGGGGCACGTCTaGGAGTGGTTGTTCCTCACTAAGCACCATTGGATCTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TRPCCNLKACSWGHV*EWLFLTKHHWIFCQ
Trigger: CTGGCAGAAGATCCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCAGCAGGGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp GGGCTCACAATGTTGGTCCCAAGTTCATCATCTGTGGTCTCCTCATaGTCATGGTTCCGGCCTCGGCCCCGGGAGGACAGATCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GLTMLVPSSSSVVSS*SWFRPRPREDRSCP
Trigger: AGGGCAGGATCTGTCCTCCCGGGGCCGAGGCCGGAACCATGACCATGAGGAGACCACAGATGATGAACTTGGGACCAACATTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS CCA 90 bp GTCGGCCTTCTTGGGTTCTCCAGACTTCAGGGGAAGGGTAGCCTGTaGAGGGCTCACCGCCCGGGAGTTCTTGGCATCTTTGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: VGLLGFSRLQGKGSL*RAHRPGVLGIFDEV
Trigger: GACCTCATCAAAGATGCCAAGAACTCCCGGGCGGTGAGCCCTCCACAGGCTACCCTTCCCCTGAAGTCTGGAGAACCCAAGAAGGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAAGGAGCTCTCCACCTaGGCCGGGACTTTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLKELST*AGTLRR
Trigger: CCTCCTTAAAGTCCCGGCCAAGGTGGAGAGCTCCTT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCGGATCTCCAGGACATaGAAGGAGCTCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: STLLGEEISPHPEALCRERISRT*KELSTL
Trigger: CAAGGTGGAGAGCTCCTTCAATGTCCTGGAGATCCG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGTCTTAAGCCCGGCGTaGTCCAGCACCAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHVLSPA*SSTSSS
Trigger: CGAAGAGCTGGTGCTGGACAACGCCGGGCTTAAGAC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGTCTTAAGCCCGGCGTaGTCCAGCACCAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYVLSPA*SSTSSS
Trigger: CGAAGAGCTGGTGCTGGACAACGCCGGGCTTAAGAC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGGGGAAATGGCAGTCTaGGCCAGGCACAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLGEMAV*ARHSLV
Trigger: CACCAAACTGTGCCTGGCCAAGACTGCCATTTCCCC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGCAAATGCTGGGTTaGCCCCGAAGGTCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHWQMLG*PRRSGR
Trigger: TCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTTGGCAAATGCTGGGTTaGCCCCGAAGGTCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGWQMLG*PRRSGR
Trigger: TCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCA...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGAGGTGCTTGAGGGACTaGTTCTTGCCAAGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQRERCLRD*FLPSAG
Trigger: GCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCT...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTATGTCCTCCATGCCATaGCCGCTCAGATCCACCTTG +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSMSSMP*PLRSTL
Trigger: CAAGGTGGATCTGAGCGGCAATGGCATGGAGGACAT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTTGCTCAGCATCTTGTaGTGTCCCTCGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLLSIL*CPSATR
Trigger: GCGGGTGGCCGAGGGACACAACAAGATGCTGAGCAA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCCCCAGATTCCCCAGTaGGCTTTCCATGTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLPQIPQ*AFHVLR
Trigger: CCTCAGGACATGGAAAGCCAACTGGGGAATCTGGGG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCAACACCGTGAACCCTaGGCTGCTGTGCTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHQHREP*AAVLSQ
Trigger: CTGGGACAGCACAGCAGCCAAGGGTTCACGGTGTTG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTCGAAGCTCCAACCCTaGGCTCTTTCCAACCCGGGA +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLSKLQP*ALSNPG
Trigger: TCCCGGGTTGGAAAGAGCCAAGGGTTGGAGCTTCGA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGCGCTGAAGCTTGGTTaGGTGCTTTGGGGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPALKLG*VLWGGG
Trigger: ACCACCGCCCCAAAGCACCAAACCAAGCTTCAGCGC...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCTCTGGCAGCTGTGGTaGGGGGCACTCTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHLWQLW*GALSSA
Trigger: AGCTGAAGAGAGTGCCCCCAACCACAGCTGCCAGAG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTCTGGCAGCTGTGGTaGGGGGCACTCTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALWQLW*GALSSA
Trigger: AGCTGAAGAGAGTGCCCCCAACCACAGCTGCCAGAG...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp CACCTGCAGCTCCTTGTCCACAGCTTTGGACACCTCACTTGCTACTaGTTCCAGCCTCTGCCGCACAGGCCCATCATTGGCCAGCACGTG +
Preference number: 5 (lower is better)
Translates to: HLQLLVHSFGHLTCY*FQPLPHRPIIGQHV
Trigger: CACGTGCTGGCCAATGATGGGCCTGTGCGGCAGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGAGCTGCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000561354.1
ENST00000644899.1
ENST00000646442.2
CDS TCA 90 bp TGCCTGCAGCTCCTTGTCCACAGCTTTGGACACCTCACTTGCTACTaGTTCCAGCCTCTGCCGCACAGGCCCATCATTGGCCAGCACGTG +
Preference number: 5 (lower is better)
Translates to: CLQLLVHSFGHLTCY*FQPLPHRPIIGQHV
Trigger: CACGTGCTGGCCAATGATGGGCCTGTGCGGCAGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGAGCTGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS GCA 90 bp TTCATCCAGCTTGTTCTGAATGTCCTGTCCTGCTTGCTCCAGCAGTaGCCCTCGGATGAAGTTCCGGGGCACAGTGACACGCTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: FIQLVLNVLSCLLQQ*PSDEVPGHSDTLRH
Trigger: GTGGCGGAGCGTGTCACTGTGCCCCGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 90 bp CCTGCCCTTTGCCTCTCACTCCAGCTTGTTCTGAATGTCCTGTCCTaGTTGCTCCAGCAGTGCCCCTCGGATGAAGTTCCGGGGCACAGT +
Preference number: 5 (lower is better)
Translates to: PALCLSLQLVLNVLS*LLQQCPSDEVPGHS
Trigger: ACTGTGCCCCGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGAGTGAGAGGCAAAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561354.1
ENST00000644899.1
CDS CCA 90 bp GGAGGCGCCAGGAGGTCAGGGCCAGCACTCGGTCCTCAAACTTCTTaGGCTTTGTCTCCAACTTCACATGATGTTGTTGGAGCACGGCCC +
Preference number: 5 (lower is better)
Translates to: GGARRSGPALGPQTS*ALSPTSHDVVGARP
Trigger: GGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCGAGTGCTGGCCCTGACCTCCTGGCGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 90 bp CCAGGGCAGACCTTGGACAGGGCAGAGCTCACATGTCGTGTCACCTaGTCCACACTTTCAGCTGATGGCAGTCGCATGCTCACCATGCCA +
Preference number: 5 (lower is better)
Translates to: PGQTLDRAELTCRVT*STLSADGSRMLTMP
Trigger: TGGCATGGTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGACACGACATGTGAGCTCTGCCCTGTCCAAGGTCTGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 90 bp TCAATGTTGGTCCCAAGTTCATCATCTGTGGTCTCCTCATGGTCATaGTTCCGGCCTCGGCCCCGGGAGGACAGATCCTGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SMLVPSSSSVVSSWS*FRPRPREDRSCPWP
Trigger: AGGCCAAGGGCAGGATCTGTCCTCCCGGGGCCGAGGCCGGAACCATGACCATGAGGAGACCACAGATGATGAACTTGGGACCAACATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp TCTGAGTCCTTGCGAGGCACATGTCGAGGGCTGAGGAGGGTGTTGTaGCAGTTGTCAGTCTGTTCCTGGCTCACTGGTTCCTGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SESLRGTCRGLRRVL*QLSVCSWLTGSCGV
Trigger: GACCCCACAGGAACCAGTGAGCCAGGAACAGACTGACAACTGCCACAACACCCTCCTCAGCCCTCGACATGTGCCTCGCAAGGACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 90 bp ACAATGTTGGTCCCAAGTTCATCATCTGTGGTCTCCTCATGGTCATaGTTCCGGCCTCGGCCCCGGGAGGACAGATCCTGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TMLVPSSSSVVSSWS*FRPRPREDRSCPWP
Trigger: AGGCCAAGGGCAGGATCTGTCCTCCCGGGGCCGAGGCCGGAACCATGACCATGAGGAGACCACAGATGATGAACTTGGGACCAACATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCTTCACATGATGTTGTaGGAGCACGGCCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLLHMML*EHGPLA
Trigger: AGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCAACTTCACATGATGTaGTTGGAGCACGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREQLHMM*LEHGPL
Trigger: CAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTCGAGGCTCCCCGACTaGCTTAGGGTATGTAGCACC +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHSRLPD*LRVCST
Trigger: GGTGCTACATACCCTAAGCAAGTCGGGGAGCCTCGA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCGAGGCTCCCCGACTaGCTTAGGGTATGTAGCACC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSRLPD*LRVCST
Trigger: GGTGCTACATACCCTAAGCAAGTCGGGGAGCCTCGA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTAGACTGAGAAAACCCTaGTCCTCGATGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSRLRKP*SSMGLW
Trigger: CCACAACCCCATCGAGGACAAGGGTTTTCTCAGTCT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGGGGAAATGGCAGTCTaGGCCAGGCACAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGGEMAV*ARHSLV
Trigger: CACCAAACTGTGCCTGGCCAAGACTGCCATTTCCCC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGAGGAGCCCAGGATTCTaGCTCAGGTCCAGGTATCGA +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLRSPGF*LRSRYR
Trigger: TCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGTCCGAGTCGAACCCATaGTCTGACAGATCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLSESNP*SDRSRL
Trigger: CAGCCTGGATCTGTCAGACAATGGGTTCGACTCGGA...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTTTGCTGCCCAGGGCATaGATGAGGATGCTGGTGCGA +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGLLPRA*MRMLVR
Trigger: TCGCACCAGCATCCTCATCAATGCCCTGGGCAGCAA...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGCCTTAGACAGCATCTaGGCCCCGATGTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGALDSI*APMSSM
Trigger: CATGGAGGACATCGGGGCCAAGATGCTGTCTAAGGC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGAGCGCCCGGGAGTTCTaGGCATCTTTGATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSAREF*ASLMRS
Trigger: GGACCTCATCAAAGATGCCAAGAACTCCCGGGCGCT...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTACACGCTCCGCCACATaGCTCAGCATCTTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSTRSAT*LSILLC
Trigger: ACACAACAAGATGCTGAGCAATGTGGCGGAGCGTGT...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGACACCGGCCGAATCTaGCGGCAGCGTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGDTGRI*RQRFCF
Trigger: AAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGTC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTGCGGGGTCCTGTAGCTaGGCATTCCTAGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGAGSCS*AFLAGS
Trigger: ACTTCCAGCTAGGAATGCCAAGCTACAGGACCCCGC...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCTCAGCCGGGGTTTGTaGACTCCTGGAGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLSRGL*TPGAAS
Trigger: AGATGCAGCTCCAGGAGTCAACAAACCCCGGCTGAG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACTATCAGGTTCCAGCTaGTCACAGGACTGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPLSGSS*SQDCAR
Trigger: GCGGGCACAGTCCTGTGACAAGCTGGAACCTGATAG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCTATCAGGTTCCAGCTaGTCACAGGACTGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLSGSS*SQDCAR
Trigger: GCGGGCACAGTCCTGTGACAAGCTGGAACCTGATAG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGGGCTGAGGAGGGTGTaGTGGCAGTTGTCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALGLRRV*WQLSVC
Trigger: ACAGACTGACAACTGCCACAACACCCTCCTCAGCCC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp TGTAGAGGGCATTGGCCTCATCCGTGGCGAGGAGCCCAGGATTCTTaGTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATGCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: CRGHWPHPWRGAQDS*SGPGIEGSWQMLGL
Trigger: CAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCTCGCCACGGATGAGGCCAATGCCCTCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp ACCCAGAGCCATCCATTCCTCATGAAACCTTATTTGAGCCCATCCTaGCCCTCGCTCCTCAGGGGGCTGAGGCACTGGGATGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: TQSHPFLMKPYLSPS*PSLLRGLRHWDEGR
Trigger: TCTTCCCTCATCCCAGTGCCTCAGCCCCCTGAGGAGCGAGGGGCAGGATGGGCTCAAATAAGGTTTCATGAGGAATGGATGGCTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS CCA 90 bp ATGGTGTCAATGTTGGTCCCAAGTTCATCATCTGTGGTCTCCTCATaGTCATGGTTCCGGCCTCGGCCCCGGGAGGACAGATCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: MVSMLVPSSSSVVSS*SWFRPRPREDRSCP
Trigger: AGGGCAGGATCTGTCCTCCCGGGGCCGAGGCCGGAACCATGACCATGAGGAGACCACAGATGATGAACTTGGGACCAACATTGACACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGCTTCACATGATGTTGTaGGAGCACGGCCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALLHMML*EHGPLA
Trigger: AGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAG...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGGTCCTCAAACTTCTaGGGCTTTGTCTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSRSSNF*GFVSNF
Trigger: GAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAAGGAGCCCAGGATTCTaGCTCAGGTCCAGGTATCGA +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPRSPGF*LRSRYR
Trigger: TCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCT...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTCCGAGTCGAACCCATaGTCTGACAGATCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHSESNP*SDRSRL
Trigger: CAGCCTGGATCTGTCAGACAATGGGTTCGACTCGGA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAAGGTGCTTGAGGGACTaGTTCTTGCCAAGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPRCLRD*FLPSAG
Trigger: GCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCT...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCCCAAAAACAGGTGCTaGAGGGACTTGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GQRSTLLGEEISPHPEALPKNRC*RDLFLP
Trigger: TGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCCCAAAAACAGGTGCTaGAGGGACTTGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREPKNRC*RDLFLP
Trigger: TGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGCCCAGGGCAGATGTATaGTTCCGATCCCATAGGATA +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREPRADV*FRSHRI
Trigger: TATCCTATGGGATCGGAACAATACATCTGCCCTGGG...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCACGTCTGGGAGTGGTaGTTCCTCACTAAGCACCAT +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLHVWEW*FLTKHH
Trigger: ATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGCTTTGGACACCTCACTaGCTACTGATTCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: STLLGEEISPHPEALCRELWTPH*LLIPAS
Trigger: AGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAG...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGTCCTTGTCCACAGCTTaGGACACCTCACTTGCTACT +
Preference number: 5 (lower is better)
Translates to: STLLGEEISPHPEALCRESLSTA*DTSLAT
Trigger: AGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGA...CTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCAACATTGCTCAGCATCTaGTTGTGTCCCTCGGCCACC +
Preference number: 5 (lower is better)
Translates to: GDKPPPRSSLQREVSRQATLLSI*LCPSAT
Trigger: GGTGGCCGAGGGACACAACAAGATGCTGAGCAATGT...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTACATTGCTCAGCATCTaGTTGTGTCCCTCGGCCACC +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGTLLSI*LCPSAT
Trigger: GGTGGCCGAGGGACACAACAAGATGCTGAGCAATGT...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGACACGCTCCGCCACATaGCTCAGCATCTTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLTRSAT*LSILLC
Trigger: ACACAACAAGATGCTGAGCAATGTGGCGGAGCGTGT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGAGGGTGTTGTGGCAGTaGTCAGTCTGTTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALRVLWQ*SVCSWL
Trigger: GAGCCAGGAACAGACTGACAACTGCCACAACACCCT...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACAGGGTGTTGTGGCAGTaGTCAGTCTGTTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHRVLWQ*SVCSWL
Trigger: GAGCCAGGAACAGACTGACAACTGCCACAACACCCT...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp CATGTCGTGTCACCTGGTCCACACTTTCAGCTGATGGCAGTCGCATaGTCACCATGCCACGCTCCGTCTCCACCAGGATCTGATTCTGAC +
Preference number: 5 (lower is better)
Translates to: HVVSPGPHFQLMAVA*SPCHAPSPPGSDSD
Trigger: GTCAGAATCAGATCCTGGTGGAGACGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGACACGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp AGTGGCAGAGCCTTGGACACTAAGGCTTCCCCACTTTCTGGTCAGTaGTCCTTCCACCCTACCATACAGACAGGGGCAGTCAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SGRALDTKASPLSGQ*SFHPTIQTGAVSPR
Trigger: CCTTGGACTGACTGCCCCTGTCTGTATGGTAGGGTGGAAGGAGCACTGACCAGAAAGTGGGGAAGCCTTAGTGTCCAAGGCTCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCAACTTCACATGATGTaGTTGGAGCACGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGQLHMM*LEHGPL
Trigger: CAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCGGTCCTCAAACTTCTaGGGCTTTGTCTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLRSSNF*GFVSNF
Trigger: GAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCG...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGAGACTGAGAAAACCCTaGTCCTCGATGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALRLRKP*SSMGLW
Trigger: CCACAACCCCATCGAGGACAAGGGTTTTCTCAGTCT...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTTTGAGGGACTTGTTCTaGCCAAGTGCAGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGLRDLF*PSAGTS
Trigger: ACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAA...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCATTGAGGGACTTGTTCTaGCCAAGTGCAGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: GDKPPPRSSLQREVSRQALRDLF*PSAGTS
Trigger: ACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAA...TGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGATCTCCTCCAGGGTCTaGGCCTTGACATTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLISSRV*ALTLKF
Trigger: GAACTTCAATGTCAAGGCCAAGACCCTGGAGGAGAT...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCACGTCTGGGAGTGGTaGTTCCTCACTAAGCACCAT +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGHVWEW*FLTKHH
Trigger: ATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGCCATGGTGTCAATGTaGGTCCCAAGTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: HPPGGGDKPPPRSSLQREAMVSM*VPSSSS
Trigger: AGATGATGAACTTGGGACCAACATTGACACCATGGC...CTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCCAGCGTTTCTGCTTTTaGATGGCCATGGTGTCAATG +
Preference number: 5 (lower is better)
Translates to: GQRSTLLGEEISPHPEALQRFCF*MAMVSM
Trigger: CATTGACACCATGGCCATCAAAAAGCAGAAACGCTG...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp AGCACTCGGTCCTCAAACTTCTTGGGCTTTGTCTCCAACTTCACATaGTGTTGTTGGAGCACGGCCCCTTGGCTCAGGCACCTCCGGATG +
Preference number: 5 (lower is better)
Translates to: STRSSNFLGFVSNFT*CCWSTAPWLRHLRM
Trigger: CATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCGAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp CTAGCACTTCAGAGCCCAGCCGCAAGTCCTTGCAGTAGAGTTTGGTaGACCACTGGTTGTAGGCCAGGGCTGCTACCATTAGGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LALQSPAASPCSRVW*TTGCRPGLLPLGPS
Trigger: ACTTGGCCCTAATGGTAGCAGCCCTGGCCTACAACCAGTGGTTCACCAAACTCTACTGCAAGGACTTGCGGCTGGGCTCTGAAGTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp CCGCTGATGAAGGCAGACACCGGCCGAATCTTGCGGCAGCGTTTCTaGTTTTTGATGGCCATGGTGTCCTGCAGAAATGAAGACGAGTGG +
Preference number: 5 (lower is better)
Translates to: PLMKADTGRILRQRF*FLMAMVSCRNEDEW
Trigger: CCACTCGTCTTCATTTCTGCAGGACACCATGGCCATCAAAAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGTCTGCCTTCATCAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS-3UTR CAA 90 bp GGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCGTCTTGGCCTTGACATaGAAGTTCTTGCCCAAAAAC +
Preference number: 5 (lower is better)
Translates to: GQRSTLLGEEISPHPEALVLALT*KFLPKN
Trigger: GTTTTTGGGCAAGAACTTCAATGTCAAGGCCAAGAC...GAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGATCTCCTCCAGGGTCTaGGCCTTGACATTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALISSRV*ALTLKF
Trigger: GAACTTCAATGTCAAGGCCAAGACCCTGGAGGAGAT...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCCCAGGGCAGATGTATaGTTCCGATCCCATAGGATA +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGPRADV*FRSHRI
Trigger: TATCCTATGGGATCGGAACAATACATCTGCCCTGGG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACCTTTGGACACCTCACTaGCTACTGATTCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHLWTPH*LLIPAS
Trigger: AGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAG...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGTCCTTGTCCACAGCTTaGGACACCTCACTTGCTACT +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALSLSTA*DTSLAT
Trigger: AGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGA...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp ACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGGGAATGGTAGAGCTCTaGCAGGATCTCATCCACTAT +
Preference number: 5 (lower is better)
Translates to: TEIHPPGGGDKPPPRSSLGMVEL*QDLIHY
Trigger: ATAGTGGATGAGATCCTGCAAGAGCTCTACCATTCC...CAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp ACACTAGGTTCCCACCATGGATTCCTCCCTCCTCCAGGACTTGCCTaGAGCTCCTTGTCCACAGCTTTGGACACCTCACTTGCTACTGAT +
Preference number: 5 (lower is better)
Translates to: TLGSHHGFLPPPGLA*SSLSTALDTSLATD
Trigger: ATCAGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGAGCTGCAGGCAAGTCCTGGAGGAGGGAGGAATCCATGGTGGGAACCTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CCA 90 bp AATCCAAGCCTGATATTGCAGCAATGCCTTGGTACAGTGGGAGCGTaGGTGGTCTCAACTCTGCATGTCCTCCTGGCCCTCCAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: NPSLILQQCLGTVGA*VVSTLHVLLALQKS
Trigger: AGACTTCTGGAGGGCCAGGAGGACATGCAGAGTTGAGACCACCCACGCTCCCACTGTACCAAGGCATTGCTGCAATATCAGGCTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS-3UTR CAA 90 bp GGGACAGAGATCCACCCTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCAAACTTCTTGGGCTTaGTCTCCAACTTCACATGAT +
Preference number: 5 (lower is better)
Translates to: GTEIHPPGGGDKPPPRSSQTSWA*SPTSHD
Trigger: ATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTG...AGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAGGGTGGATCTCTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACGGAATGGTAGAGCTCTaGCAGGATCTCATCCACTAT +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHGMVEL*QDLIHY
Trigger: ATAGTGGATGAGATCCTGCAAGAGCTCTACCATTCC...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATGCCATGGTGTCAATGTaGGTCCCAAGTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYAMVSM*VPSSSS
Trigger: AGATGATGAACTTGGGACCAACATTGACACCATGGC...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCAGCGTTTCTGCTTTTaGATGGCCATGGTGTCAATG +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYQRFCF*MAMVSM
Trigger: CATTGACACCATGGCCATCAAAAAGCAGAAACGCTG...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp CCGCTGATGAAGGCAGACACCGGCCGAATCTTGCGGCAGCGTTTCTaGTTTTTGATGGCCATGGTGTCAATGTTGGTCCCAAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: PLMKADTGRILRQRF*FLMAMVSMLVPSSS
Trigger: TGATGAACTTGGGACCAACATTGACACCATGGCCATCAAAAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGTCTGCCTTCATCAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 90 bp GAAGAGTCCTTCCAACGCCTGCATTCGCATATAGCACTCCCAGCATaGTCTTGGCCACTGGGTCTTAGTCCACTCTCAAGGAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: EESFQRLHSHIALPA*SWPLGLSPLSRRGE
Trigger: TTCTCCTCTCCTTGAGAGTGGACTAAGACCCAGTGGCCAAGAGCATGCTGGGAGTGCTATATGCGAATGCAGGCGTTGGAAGGACTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS-3UTR CAA 90 bp GATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGGTCTTGGCCTTGACATaGAAGTTCTTGCCCAAAAAC +
Preference number: 5 (lower is better)
Translates to: DKPPPRSSLQREVSRQALVLALT*KFLPKN
Trigger: GTTTTTGGGCAAGAACTTCAATGTCAAGGCCAAGAC...CAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 90 bp TCCAGGGTCTTGGCCTTGACATTGAAGTTCTTGCCCAAAAACAGGTaGTTGAGGGACTTGTTCTTGCCAAGTGCAGGCACCAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: SRVLALTLKFLPKNR*LRDLFLPSAGTSVR
Trigger: CCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAAGGCCAAGACCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS-3UTR CAA 90 bp TCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCAGGTCAAACTTCTTGGGCTTaGTCTCCAACTTCACATGAT +
Preference number: 5 (lower is better)
Translates to: SLQREVSRQALTASVSPGQTSWA*SPTSHD
Trigger: ATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTG...ACCTGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCATTGACATTGAAGTTCTaGCCCAAAAACAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPLTLKF*PKNRCL
Trigger: CAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAA...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp GAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTTGACATTGAAGTTCTaGCCCAAAAACAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: EISPHPEALCRERYRGRHLTLKF*PKNRCL
Trigger: CAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAA...GTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 90 bp GCTCTTGGCCACTGGGTCTTAGTCCACTCTCAAGGAGAGGAGAATTaGAATGACCAATGTTCCCAAGAACCCTGGGTCCTAGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: ALGHWVLVHSQGEEN*NDQCSQEPWVLAFS
Trigger: GGAGAATGCTAGGACCCAGGGTTCTTGGGAACATTGGTCATTTCAATTCTCCTCTCCTTGAGAGTGGACTAAGACCCAGTGGCCAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS-3UTR CAA 90 bp CTCCTGGGGGAGGAGATAAGCCCCCACCCAGAAGCTCTCTGCAGAGAGAGGTATCTGAAATCCAAAAGATaGAACTCCCGGTTATCTTCA +
Preference number: 5 (lower is better)
Translates to: LLGEEISPHPEALCRERYLKSKR*NSRLSS
Trigger: TGAAGATAACCGGGAGTTCAATCTTTTGGATTTCAG...ATACCTCTCTCTGCAGAGAGCTTCTGGGTGGGGGCTTATCTCCTCCCCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS-3UTR CAA 90 bp AGCTCTCTGCAGAGAGAGGTATCGAGGCAGGCACTGACAGCCTCCGTCTCTCCACTGAAATCCAAAAGATaGAACTCCCGGTTATCTTCA +
Preference number: 5 (lower is better)
Translates to: SSLQREVSRQALTASVSPLKSKR*NSRLSS
Trigger: TGAAGATAACCGGGAGTTCAATCTTTTGGATTTCAG...TGGAGAGACGGAGGCTGTCAGTGCCTGCCTCGATACCTCTCTCTGCAGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 72 bp TCATGGTTCCGGCCTCGGCCCCGGGAGGACAGATCCTaGCCTTGGCCTGGGCACCCTGGTGGATCTGACAGC +
Preference number: 6 (lower is better)
Translates to: SWFRPRPREDRS*PWPGHPGGSDS
Trigger: GCTGTCAGATCCACCAGGGTGCCCAGGCCAAGGGCAGGATCTGTCCTCCCGGGGCCGAGGCCGGAACCATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp CTTCTGGAGTGGAGGCAGCGGTGCCTCCGAGAGTCCTaGCCGCACGGTCCTCAGAGTCCGGGGGTAGCTAGA +
Preference number: 6 (lower is better)
Translates to: LLEWRQRCLRES*PHGPQSPGVAR
Trigger: TCTAGCTACCCCCGGACTCTGAGGACCGTGCGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTCCAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp TGTGGCCTCTGCTCTGCGCATGGCGCTGAAGCTTGGTTTGGTGCTTaGGGGCGGTGGTGGGGGCTTCCAGGATCCAGGCCCTGCGTCGTC +
Preference number: 6 (lower is better)
Translates to: CGLCSAHGAEAWFGA*GRWWGLPGSRPCVV
Trigger: GACGACGCAGGGCCTGGATCCTGGAAGCCCCCACCACCGCCCCAAAGCACCAAACCAAGCTTCAGCGCCATGCGCAGAGCAGAGGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp TCTTCTGCCAGACGTCCTCGGTGCGCTCAGGCGCGCTaGGATAGGCTTGGGAGATGTCGCTCACGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: SSARRPRCAQAR*DRLGRCRSRGR
Trigger: CCTTCCCCGTGAGCGACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCACCGAGGACGTCTGGCAGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp CTCTCCACCTTGGCCGGGACTTTAAGGAGGAAGAGGTaGAGGCGCCAGGAGGTCAGGGCCAGCACTCGGTCC +
Preference number: 6 (lower is better)
Translates to: LSTLAGTLRRKR*RRQEVRASTRS
Trigger: GGACCGAGTGCTGGCCCTGACCTCCTGGCGCCTCCACCTCTTCCTCCTTAAAGTCCCGGCCAAGGTGGAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp AAAGTGAAACAGGCCCCGGCGCCTCTTCTTCTGGAGTaGAGGCAGCGGTGCCTCCGAGAGTCCTGGCCGCAC +
Preference number: 6 (lower is better)
Translates to: KVKQAPAPLLLE*RQRCLRESWPH
Trigger: GTGCGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTCCAGAAGAAGAGGCGCCGGGGCCTGTTTCACTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp GACGTCCTCGGTGCGCTCAGGCGCGCTGCGATAGGCTaGGGAGATGTCGCTCACGGGGAAGGACATGAAGCG +
Preference number: 6 (lower is better)
Translates to: DVLGALRRAAIG*GDVAHGEGHEA
Trigger: CGCTTCATGTCCTTCCCCGTGAGCGACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCACCGAGGACGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp CTTCTGCCAGACGTCCTCGGTGCGCTCAGGCGCGCTGCGATAGGCTaGGGAGATGTCGCTCACGGGGAAGGACATGAAGCGCAGCGTGTG +
Preference number: 6 (lower is better)
Translates to: LLPDVLGALRRAAIG*GDVAHGEGHEAQRV
Trigger: CACACGCTGCGCTTCATGTCCTTCCCCGTGAGCGACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCACCGAGGACGTCTGGCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp CCCTGCCTCACTGAGTCCCTAGCCACGGGGAAGCCCTaGAGAGACCCTCTGAAGAGTCCTTCCAACGCCTGC +
Preference number: 6 (lower is better)
Translates to: PCLTESLATGKP*RDPLKSPSNAC
Trigger: GCAGGCGTTGGAAGGACTCTTCAGAGGGTCTCTGCAGGGCTTCCCCGTGGCTAGGGACTCAGTGAGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CCA 72 bp AGGGAGCTGGCAAATGCTGGGTTTGCCCCGAAGGTCTaGCCGAGTGCCTGGAGCCCTCGAGGGGAAATGGCA +
Preference number: 6 (lower is better)
Translates to: RELANAGFAPKV*PSAWSPRGEMA
Trigger: TGCCATTTCCCCTCGAGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp CCATGTGGCCTCTGCTCTGCGCATGGCGCTGAAGCTTaGTTTGGTGCTTTGGGGCGGTGGTGGGGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: PCGLCSAHGAEA*FGALGRWWGLP
Trigger: TGGAAGCCCCCACCACCGCCCCAAAGCACCAAACCAAGCTTCAGCGCCATGCGCAGAGCAGAGGCCACATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp CCTGGATCAGGGGGCCCTTGGACTTCGGGCTCCTCTTaGTCTTGCTGTGAGCTCAGCCTCAGCCGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: PGSGGPWTSGSS*SCCELSLSRGL
Trigger: CAAACCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGAGGAGCCCGAAGTCCAAGGGCCCCCTGATCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp CCGAGTGCCTGGAGCCCTCGAGGGGAAATGGCAGTCTaGGCCAGGCACAGTTTGGTGAGGCCAGAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: PSAWSPRGEMAV*ARHSLVRPEGK
Trigger: CTTCCCCTCTGGCCTCACCAAACTGTGCCTGGCCAAGACTGCCATTTCCCCTCGAGGGCTCCAGGCACTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp GGTCCAGGTATCGAAGGGAGCTGGCAAATGCTGGGTTaGCCCCGAAGGTCTGGCCGAGTGCCTGGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: GPGIEGSWQMLG*PRRSGRVPGAL
Trigger: GAGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp GGCACAGTGACACGCTCCGCCACATTGCTCAGCATCTaGTTGTGTCCCTCGGCCACCCGCATGGCCACAGGG +
Preference number: 6 (lower is better)
Translates to: GTVTRSATLLSI*LCPSATRMATG
Trigger: CCCTGTGGCCATGCGGGTGGCCGAGGGACACAACAAGATGCTGAGCAATGTGGCGGAGCGTGTCACTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000561354.1
ENST00000644899.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp TGCAGGGCCTTAGACAGCATCTTGGCCCCGATGTCCTCCATGCCATaGCCGCTCAGATCCACCTTGGCCAGGCAGGTGTTGCTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: CRALDSILAPMSSMP*PLRSTLARQVLLPR
Trigger: CCTGGGCAGCAACACCTGCCTGGCCAAGGTGGATCTGAGCGGCAATGGCATGGAGGACATCGGGGCCAAGATGCTGTCTAAGGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp CTGGTTCCTGTGGGGTCAGGAGGCCGTCTTCTATCAGGTTCCAGCTaGTCACAGGACTGTGCCCGCCGTGTCCTCTTGGGCTTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: LVPVGSGGRLLSGSS*SQDCARRVLLGFRG
Trigger: CCCCCTGAAGCCCAAGAGGACACGGCGGGCACAGTCCTGTGACAAGCTGGAACCTGATAGAAGACGGCCTCCTGACCCCACAGGAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS TCA 72 bp GGCACCGAGAAGCAAGTCGATGACGCAGTCAGTTCCTaGCAGGTCCAGGTGCACCAGGGCGTTGGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: GTEKQVDDAVSS*QVQVHQGVGLG
Trigger: GCCCAACCCAACGCCCTGGTGCACCTGGACCTGTCAGGAACTGACTGCGTCATCGACTTGCTTCTCGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 72 bp AGCCCTTCATCCAGGCGGGTGGCCATCCCATTCTCCTaGCGAGTCCCAGGTGCTGGCATACTGGGTCGACCA +
Preference number: 6 (lower is better)
Translates to: SPSSRRVAIPFS*RVPGAGILGRP
Trigger: TGGTCGACCCAGTATGCCAGCACCTGGGACTCGTCAGGAGAATGGGATGGCCACCCGCCTGGATGAAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp GTCACCAGGCCCTGCTGCAACCTGAAGGCCTGCTCCTaGGGGCACGTCTGGGAGTGGTTGTTCCTCACTAAG +
Preference number: 6 (lower is better)
Translates to: VTRPCCNLKACS*GHVWEWLFLTK
Trigger: CTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCAGCAGGGCCTGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp TCTTGCTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATGCTGGGTTaGCCCCGAAGGTCTGGCCGAGTGCCTGGAGCCCTCGAGGGGAAA +
Preference number: 6 (lower is better)
Translates to: SCSGPGIEGSWQMLG*PRRSGRVPGALEGK
Trigger: TTTCCCCTCGAGGGCTCCAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 90 bp TTCCGGGGCACAGTGACACGCTCCGCCACATTGCTCAGCATCTTGTaGTGTCCCTCGGCCACCCGCATGGCCACAGGGCATAACTCCTGT +
Preference number: 6 (lower is better)
Translates to: FRGTVTRSATLLSIL*CPSATRMATGHNSC
Trigger: ACAGGAGTTATGCCCTGTGGCCATGCGGGTGGCCGAGGGACACAACAAGATGCTGAGCAATGTGGCGGAGCGTGTCACTGTGCCCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000561354.1
ENST00000644899.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp AAGTTCCGGGGCACAGTGACACGCTCCGCCACATTGCTCAGCATCTaGTTGTGTCCCTCGGCCACCCGCATGGCCACAGGGCATAACTCC +
Preference number: 6 (lower is better)
Translates to: KFRGTVTRSATLLSI*LCPSATRMATGHNS
Trigger: GGAGTTATGCCCTGTGGCCATGCGGGTGGCCGAGGGACACAACAAGATGCTGAGCAATGTGGCGGAGCGTGTCACTGTGCCCCGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000561354.1
ENST00000644899.1
ENST00000646194.1
ENST00000646442.2
CDS TCA 72 bp GATAGGCTTGGGAGATGTCGCTCACGGGGAAGGACATaGAGCGCAGCGTGTGGTTGCTCTCCAGGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: DRLGRCRSRGRT*SAACGCSPGPL
Trigger: CAAGGGCCCTGGAGAGCAACCACACGCTGCGCTTCATGTCCTTCCCCGTGAGCGACATCTCCCAAGCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp CTTGCTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATaGTGGGTTTGCCCCGAAGGTCTGGCCGAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: LAQVQVSKGAGK*WVCPEGLAECL
Trigger: CAGGCACTCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 72 bp GCTTTGGACACCTCACTTGCTACTGATTCCAGCCTCTaGCGCACAGGCCCATCATTGGCCAGCACGTGGCCC +
Preference number: 6 (lower is better)
Translates to: ALDTSLATDSSL*RTGPSLASTWP
Trigger: GGGCCACGTGCTGGCCAATGATGGGCCTGTGCGGCAGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000561354.1
ENST00000644899.1
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp TCAGGGGGCCCTTGGACTTCGGGCTCCTCTTGGTCTTaGTGTGAGCTCAGCCTCAGCCGGGGTTTGTTGACT +
Preference number: 6 (lower is better)
Translates to: SGGPWTSGSSWS*CELSLSRGLLT
Trigger: AGTCAACAAACCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGAGGAGCCCGAAGTCCAAGGGCCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp TGTCAGGCTGACCATGGACTCCAGGATCACCTAGTATaGGGGAAAGGGAGGCCAGAGGCCCAAGGGGGACAG +
Preference number: 6 (lower is better)
Translates to: CQADHGLQDHLV*GKGRPEAQGGQ
Trigger: CTGTCCCCCTTGGGCCTCTGGCCTCCCTTTCCCCCATACTAGGTGATCCTGGAGTCCATGGTCAGCCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CAA 72 bp GCCAGCTTCTGGACAAAGTCCGTCTTAAGCCCGGCGTaGTCCAGCACCAGCTCTTCGAGGCTCCCCGACTTG +
Preference number: 6 (lower is better)
Translates to: ASFWTKSVLSPA*SSTSSSRLPDL
Trigger: CAAGTCGGGGAGCCTCGAAGAGCTGGTGCTGGACAACGCCGGGCTTAAGACGGACTTTGTCCAGAAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp TGGTCTTGCTGTGAGCTCAGCCTCAGCCGGGGTTTGTaGACTCCTGGAGCTGCATCTCCAGCCTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: WSCCELSLSRGL*TPGAASPASAS
Trigger: GGAGGCTGAGGCTGGAGATGCAGCTCCAGGAGTCAACAAACCCCGGCTGAGGCTGAGCTCACAGCAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp GGGTCTGAGTCCTTGCGAGGCACATGTCGAGGGCTGAGGAGGGTGTaGTGGCAGTTGTCAGTCTGTTCCTGGCTCACTGGTTCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GSESLRGTCRGLRRV*WQLSVCSWLTGSCG
Trigger: CCCACAGGAACCAGTGAGCCAGGAACAGACTGACAACTGCCACAACACCCTCCTCAGCCCTCGACATGTGCCTCGCAAGGACTCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp CTAAGCACCATTGGATCTTCTGCCAGACGTCCTCGGTaGGCTCAGGCGCGCTGCGATAGGCTTGGGAGATGT +
Preference number: 6 (lower is better)
Translates to: LSTIGSSARRPR*AQARCDRLGRC
Trigger: ACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCACCGAGGACGTCTGGCAGAAGATCCAATGGTGCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp AGTCAGTTCCTGACAGGTCCAGGTGCACCAGGGCGTTaGGTTGGGCCAGGAAACTGTAGAGGGCATTGGCCT +
Preference number: 6 (lower is better)
Translates to: SQFLTGPGAPGR*VGPGNCRGHWP
Trigger: AGGCCAATGCCCTCTACAGTTTCCTGGCCCAACCCAACGCCCTGGTGCACCTGGACCTGTCAGGAACTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp GCCACCGACAGTGACTGCAGGGAACAGTCCTCTTCCTaGATCAGCTGCACCAGCTTGTGGAGGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ATDSDCREQSSS*ISCTSLWRISS
Trigger: GGAGGAGATCCTCCACAAGCTGGTGCAGCTGATCCAGGAAGAGGACTGTTCCCTGCAGTCACTGTCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp CTGGGCCCTCTCGTTTCCCATCGAAGCTCCAACCCTTaGCTCTTTCCAACCCGGGAAGGGCAACACCGTGAA +
Preference number: 6 (lower is better)
Translates to: LGPLVSHRSSNP*LFPTREGQHRE
Trigger: TTCACGGTGTTGCCCTTCCCGGGTTGGAAAGAGCCAAGGGTTGGAGCTTCGATGGGAAACGAGAGGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp CTTGGGTTCTCCAGACTTCAGGGGAAGGGTAGCCTGTaGAGGGCTCACCGCCCGGGAGTTCTTGGCATCTTT +
Preference number: 6 (lower is better)
Translates to: LGFSRLQGKGSL*RAHRPGVLGIF
Trigger: AAAGATGCCAAGAACTCCCGGGCGGTGAGCCCTCCACAGGCTACCCTTCCCCTGAAGTCTGGAGAACCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CCA 72 bp GGCAGATGCACAGGGCAGGGCTGTCATGGCTTAGCATaGTCGGCCTTCTTGGGTTCTCCAGACTTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: GRCTGQGCHGLA*SAFLGSPDFRG
Trigger: TCCCCTGAAGTCTGGAGAACCCAAGAAGGCCGACCATGCTAAGCCATGACAGCCCTGCCCTGTGCATCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CAA 72 bp GGGCTCCCGCTGATGAAGGCAGACACCGGCCGAATCTaGCGGCAGCGTTTCTGCTTTTTGATGGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: GLPLMKADTGRI*RQRFCFLMAMV
Trigger: CACCATGGCCATCAAAAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGTCTGCCTTCATCAGCGGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp TCTTGGTCTTGCTGTGAGCTCAGCCTCAGCCGGGGTTaGTTGACTCCTGGAGCTGCATCTCCAGCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SWSCCELSLSRG*LTPGAASPASA
Trigger: GGCTGAGGCTGGAGATGCAGCTCCAGGAGTCAACAAACCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp GGGCAGGGCTGTCATGGCTTAGCATGGTCGGCCTTCTaGGGTTCTCCAGACTTCAGGGGAAGGGTAGCCTGT +
Preference number: 6 (lower is better)
Translates to: GQGCHGLAWSAF*GSPDFRGRVAC
Trigger: ACAGGCTACCCTTCCCCTGAAGTCTGGAGAACCCAAGAAGGCCGACCATGCTAAGCCATGACAGCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CAA 90 bp GGGCTTTGTCTCCAACTTCACATGATGTTGTTGGAGCACGGCCCCTaGGCTCAGGCACCTCCGGATGCTGTCTTGCAACTCGCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: GLCLQLHMMLLEHGP*AQAPPDAVLQLAGE
Trigger: CTCACCCGCGAGTTGCAAGACAGCATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 90 bp TGCTGCAACCTGAAGGCCTGCTCCTGGGGGCACGTCTGGGAGTGGTaGTTCCTCACTAAGCACCATTGGATCTTCTGCCAGACGTCCTCG +
Preference number: 6 (lower is better)
Translates to: CCNLKACSWGHVWEW*FLTKHHWIFCQTSS
Trigger: CGAGGACGTCTGGCAGAAGATCCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp GCCCTTTGCCTCTCACTCCAGCTTGTTCTGAATGTCCTGTCCTGCTaGCTCCAGCAGTGCCCCTCGGATGAAGTTCCGGGGCACAGTGAC +
Preference number: 6 (lower is better)
Translates to: ALCLSLQLVLNVLSC*LQQCPSDEVPGHSD
Trigger: GTCACTGTGCCCCGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGAGTGAGAGGCAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561354.1
ENST00000644899.1
CDS CAA 90 bp GCCAGGAGGTCAGGGCCAGCACTCGGTCCTCAAACTTCTTGGGCTTaGTCTCCAACTTCACATGATGTTGTTGGAGCACGGCCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: ARRSGPALGPQTSWA*SPTSHDVVGARPLG
Trigger: GCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCGAGTGCTGGCCCTGACCTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 90 bp TTAAGCCCGGCGTTGTCCAGCACCAGCTCTTCGAGGCTCCCCGACTaGCTTAGGGTATGTAGCACCTGTTCTAGCACTTCAGAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LSPALSSTSSSRLPD*LRVCSTCSSTSEPS
Trigger: GCTGGGCTCTGAAGTGCTAGAACAGGTGCTACATACCCTAAGCAAGTCGGGGAGCCTCGAAGAGCTGGTGCTGGACAACGCCGGGCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 90 bp CAGGACTTGCCTGCAGCTCCTTGTCCACAGCTTTGGACACCTCACTaGCTACTGATTCCAGCCTCTGCCGCACAGGCCCATCATTGGCCA +
Preference number: 6 (lower is better)
Translates to: QDLPAAPCPQLWTPH*LLIPASAAQAHHWP
Trigger: TGGCCAATGATGGGCCTGTGCGGCAGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGAGCTGCAGGCAAGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS TCA 72 bp GCTCACATGTCGTGTCACCTGGTCCACACTTTCAGCTaGTGGCAGTCGCATGCTCACCATGCCACGCTCCGT +
Preference number: 6 (lower is better)
Translates to: AHMSCHLVHTFS*WQSHAHHATLR
Trigger: ACGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGACACGACATGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 72 bp TCACCTGGTCCACACTTTCAGCTGATGGCAGTCGCATaGTCACCATGCCACGCTCCGTCTCCACCAGGATCT +
Preference number: 6 (lower is better)
Translates to: SPGPHFQLMAVA*SPCHAPSPPGS
Trigger: AGATCCTGGTGGAGACGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 72 bp CATTGGCCTCATCCGTGGCGAGGAGCCCAGGATTCTTaGTCAGGTCCAGGTATCGAAGGGAGCTGGCAAATG +
Preference number: 6 (lower is better)
Translates to: HWPHPWRGAQDS*SGPGIEGSWQM
Trigger: CATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCTCGCCACGGATGAGGCCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp CTCAGACTGAGAAAACCCTTGTCCTCGATGGGGTTGTaGGACAGAGTGAGGGCATGCAGCACACAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LRLRKPLSSMGL*DRVRACSTQLP
Trigger: CGGGAGCTGTGTGCTGCATGCCCTCACTCTGTCCCACAACCCCATCGAGGACAAGGGTTTTCTCAGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp CAGGATTCTTGCTCAGGTCCAGGTATCGAAGGGAGCTaGCAAATGCTGGGTTTGCCCCGAAGGTCTGGCCGA +
Preference number: 6 (lower is better)
Translates to: QDSCSGPGIEGS*QMLGLPRRSGR
Trigger: TCGGCCAGACCTTCGGGGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp TGCTGCAACCTGAAGGCCTGCTCCTGGGGGCACGTCTaGGAGTGGTTGTTCCTCACTAAGCACCATTGGATC +
Preference number: 6 (lower is better)
Translates to: CCNLKACSWGHV*EWLFLTKHHWI
Trigger: GATCCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp ATGTTGGTCCCAAGTTCATCATCTGTGGTCTCCTCATaGTCATGGTTCCGGCCTCGGCCCCGGGAGGACAGA +
Preference number: 6 (lower is better)
Translates to: MLVPSSSSVVSS*SWFRPRPREDR
Trigger: TCTGTCCTCCCGGGGCCGAGGCCGGAACCATGACCATGAGGAGACCACAGATGATGAACTTGGGACCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp TTGCGAGGCACATGTCGAGGGCTGAGGAGGGTGTTGTaGCAGTTGTCAGTCTGTTCCTGGCTCACTGGTTCC +
Preference number: 6 (lower is better)
Translates to: LRGTCRGLRRVL*QLSVCSWLTGS
Trigger: GGAACCAGTGAGCCAGGAACAGACTGACAACTGCCACAACACCCTCCTCAGCCCTCGACATGTGCCTCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp GCATTGGCCTCATCCGTGGCGAGGAGCCCAGGATTCTaGCTCAGGTCCAGGTATCGAAGGGAGCTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: ALASSVARSPGF*LRSRYRRELAN
Trigger: ATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCTCGCCACGGATGAGGCCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp TTAGACAGCATCTTGGCCCCGATGTCCTCCATGCCATaGCCGCTCAGATCCACCTTGGCCAGGCAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: LDSILAPMSSMP*PLRSTLARQVL
Trigger: CAACACCTGCCTGGCCAAGGTGGATCTGAGCGGCAATGGCATGGAGGACATCGGGGCCAAGATGCTGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp CTGAAGGCCTGCTCCTGGGGGCACGTCTGGGAGTGGTaGTTCCTCACTAAGCACCATTGGATCTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: LKACSWGHVWEW*FLTKHHWIFCQ
Trigger: CTGGCAGAAGATCCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp TCCTTGCGAGGCACATGTCGAGGGCTGAGGAGGGTGTaGTGGCAGTTGTCAGTCTGTTCCTGGCTCACTGGT +
Preference number: 6 (lower is better)
Translates to: SLRGTCRGLRRV*WQLSVCSWLTG
Trigger: ACCAGTGAGCCAGGAACAGACTGACAACTGCCACAACACCCTCCTCAGCCCTCGACATGTGCCTCGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000560349.1
ENST00000645304.1
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp CCACACTTTCAGCTGATGGCAGTCGCATGCTCACCATaGCACGCTCCGTCTCCACCAGGATCTGATTCTGAC +
Preference number: 6 (lower is better)
Translates to: PHFQLMAVACSP*HAPSPPGSDSD
Trigger: GTCAGAATCAGATCCTGGTGGAGACGGAGCGTGGCATGGTGAGCATGCGACTGCCATCAGCTGAAAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 72 bp CATCCATTCCTCATGAAACCTTATTTGAGCCCATCCTaGCCCTCGCTCCTCAGGGGGCTGAGGCACTGGGAT +
Preference number: 6 (lower is better)
Translates to: HPFLMKPYLSPS*PSLLRGLRHWD
Trigger: ATCCCAGTGCCTCAGCCCCCTGAGGAGCGAGGGGCAGGATGGGCTCAAATAAGGTTTCATGAGGAATGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS GCA 72 bp CGGCAGCGTTTCTGCTTTTTGATGGCCATGGTGTCCTaGAGAAATGAAGACGAGTGGCAGGGCCAGGCACCT +
Preference number: 6 (lower is better)
Translates to: RQRFCFLMAMVS*RNEDEWQGQAP
Trigger: AGGTGCCTGGCCCTGCCACTCGTCTTCATTTCTGCAGGACACCATGGCCATCAAAAAGCAGAAACGCTGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS GCA 72 bp TGCCTCTCACTCCAGCTTGTTCTGAATGTCCTGTCCTaGTTGCTCCAGCAGTGCCCCTCGGATGAAGTTCCG +
Preference number: 6 (lower is better)
Translates to: CLSLQLVLNVLS*LLQQCPSDEVP
Trigger: CGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGAGTGAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561354.1
ENST00000644899.1
CDS CCA 72 bp ACCTTGGACAGGGCAGAGCTCACATGTCGTGTCACCTaGTCCACACTTTCAGCTGATGGCAGTCGCATGCTC +
Preference number: 6 (lower is better)
Translates to: TLDRAELTCRVT*STLSADGSRML
Trigger: GAGCATGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGACACGACATGTGAGCTCTGCCCTGTCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CCA 72 bp CTGATATTGCAGCAATGCCTTGGTACAGTGGGAGCGTaGGTGGTCTCAACTCTGCATGTCCTCCTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LILQQCLGTVGA*VVSTLHVLLAL
Trigger: GAGGGCCAGGAGGACATGCAGAGTTGAGACCACCCACGCTCCCACTGTACCAAGGCATTGCTGCAATATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CAA 72 bp CTCCAACTTCACATGATGTTGTTGGAGCACGGCCCCTaGGCTCAGGCACCTCCGGATGCTGTCTTGCAACTC +
Preference number: 6 (lower is better)
Translates to: LQLHMMLLEHGP*AQAPPDAVLQL
Trigger: GAGTTGCAAGACAGCATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp AGGGAGGAGTTTATCTGCAGGGCCTTAGACAGCATCTaGGCCCCGATGTCCTCCATGCCATTGCCGCTCAGA +
Preference number: 6 (lower is better)
Translates to: REEFICRALDSI*APMSSMPLPLR
Trigger: TCTGAGCGGCAATGGCATGGAGGACATCGGGGCCAAGATGCTGTCTAAGGCCCTGCAGATAAACTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp TCGGTCCTCAAACTTCTTGGGCTTTGTCTCCAACTTCACATGATGTaGTTGGAGCACGGCCCCTTGGCTCAGGCACCTCCGGATGCTGTC +
Preference number: 6 (lower is better)
Translates to: SVLKLLGLCLQLHMM*LEHGPLAQAPPDAV
Trigger: GACAGCATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS TCA 72 bp CAGAGCCCAGCCGCAAGTCCTTGCAGTAGAGTTTGGTaGACCACTGGTTGTAGGCCAGGGCTGCTACCATTA +
Preference number: 6 (lower is better)
Translates to: QSPAASPCSRVW*TTGCRPGLLPL
Trigger: TAATGGTAGCAGCCCTGGCCTACAACCAGTGGTTCACCAAACTCTACTGCAAGGACTTGCGGCTGGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS GCA 72 bp CAAAAACAGGTGCTTGAGGGACTTGTTCTTGCCAAGTaGAGGCACCAGTGTCAGGAGGTCCGAGTCGAACCC +
Preference number: 6 (lower is better)
Translates to: QKQVLEGLVLAK*RHQCQEVRVEP
Trigger: GGGTTCGACTCGGACCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CCA 72 bp CGCCTGCATTCGCATATAGCACTCCCAGCATGCTCTTaGCCACTGGGTCTTAGTCCACTCTCAAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: RLHSHIALPACS*PLGLSPLSRRG
Trigger: TCCTCTCCTTGAGAGTGGACTAAGACCCAGTGGCCAAGAGCATGCTGGGAGTGCTATATGCGAATGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CAA 72 bp CTTCTTGGGCTTTGTCTCCAACTTCACATGATGTTGTaGGAGCACGGCCCCTTGGCTCAGGCACCTCCGGAT +
Preference number: 6 (lower is better)
Translates to: LLGLCLQLHMML*EHGPLAQAPPD
Trigger: ATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp GCCCTTGCGATGTCCAGGAAGCCCAGGGCAGATGTATaGTTCCGATCCCATAGGATAGTTCTGAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ALAMSRKPRADV*FRSHRIVLREE
Trigger: CTCCTCCCTCAGAACTATCCTATGGGATCGGAACAATACATCTGCCCTGGGCTTCCTGGACATCGCAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp GTCCTCAAACTTCTTGGGCTTTGTCTCCAACTTCACATGATGTTGTaGGAGCACGGCCCCTTGGCTCAGGCACCTCCGGATGCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: VLKLLGLCLQLHMML*EHGPLAQAPPDAVL
Trigger: CAAGACAGCATCCGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 90 bp AGTGACTGCAGGGAACAGTCCTCTTCCTGGATCAGCTGCACCAGCTaGTGGAGGATCTCCTCCAGGGTCTTGGCCTTGACATTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: SDCREQSSSWISCTS*WRISSRVLALTLKF
Trigger: GAACTTCAATGTCAAGGCCAAGACCCTGGAGGAGATCCTCCACAAGCTGGTGCAGCTGATCCAGGAAGAGGACTGTTCCCTGCAGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp ATAGTTCTGAGGGAGGAGTTTATCTGCAGGGCCTTAGACAGCATCTaGGCCCCGATGTCCTCCATGCCATTGCCGCTCAGATCCACCTTG +
Preference number: 6 (lower is better)
Translates to: IVLREEFICRALDSI*APMSSMPLPLRSTL
Trigger: CAAGGTGGATCTGAGCGGCAATGGCATGGAGGACATCGGGGCCAAGATGCTGTCTAAGGCCCTGCAGATAAACTCCTCCCTCAGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp CTCTCCAGGGCCCTTGCGATGTCCAGGAAGCCCAGGGCAGATGTATaGTTCCGATCCCATAGGATAGTTCTGAGGGAGGAGTTTATCTGC +
Preference number: 6 (lower is better)
Translates to: LSRALAMSRKPRADV*FRSHRIVLREEFIC
Trigger: GCAGATAAACTCCTCCCTCAGAACTATCCTATGGGATCGGAACAATACATCTGCCCTGGGCTTCCTGGACATCGCAAGGGCCCTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp GGGAGGAAGACAGTGCTTCCATGCACCCAACTCAGGTACTTTTCTTaGTCCATGCCTCCGAGGAGGCCCTGCTATCCCATTCCTGGTGTA +
Preference number: 6 (lower is better)
Translates to: GRKTVLPCTQLRYFS*SMPPRRPCYPIPGV
Trigger: TACACCAGGAATGGGATAGCAGGGCCTCCTCGGAGGCATGGACAAAGAAAAGTACCTGAGTTGGGTGCATGGAAGCACTGTCTTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS TCA 72 bp GTGACGACTGAGAGCTTCACTTCATCCAGCTTGTTCTaGATGTCCTGTCCTGCTTGCTCCAGCAGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: VTTESFTSSSLF*MSCPACSSSAP
Trigger: AGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGATGAAGTGAAGCTCTCAGTCGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp CTTCACTTCATCCAGCTTGTTCTGAATGTCCTGTCCTaGTTGCTCCAGCAGTGCCCCTCGGATGAAGTTCCG +
Preference number: 6 (lower is better)
Translates to: LHFIQLVLNVLS*LLQQCPSDEVP
Trigger: CGGAACTTCATCCGAGGGGCACTGCTGGAGCAAGCAGGACAGGACATTCAGAACAAGCTGGATGAAGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS GCA 72 bp TTCCATGCACCCAACTCAGGTACTTTTCTTTGTCCATaGCTCCGAGGAGGCCCTGCTATCCCATTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: FHAPNSGTFLCP*LRGGPAIPFLV
Trigger: CACCAGGAATGGGATAGCAGGGCCTCCTCGGAGGCATGGACAAAGAAAAGTACCTGAGTTGGGTGCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS GCA 72 bp CAGGGGAGTACAGATCAGTGGAAGGGGACAGTGTTGTaGAGGTTTAAGGGCAGGGCCCAGGTTATTAAGGAG +
Preference number: 6 (lower is better)
Translates to: QGSTDQWKGTVL*RFKGRAQVIKE
Trigger: CTCCTTAATAACCTGGGCCCTGCCCTTAAACCTGCACAACACTGTCCCCTTCCACTGATCTGTACTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS GCA 72 bp TTCCAACGCCTGCATTCGCATATAGCACTCCCAGCATaGTCTTGGCCACTGGGTCTTAGTCCACTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: FQRLHSHIALPA*SWPLGLSPLSR
Trigger: CCTTGAGAGTGGACTAAGACCCAGTGGCCAAGAGCATGCTGGGAGTGCTATATGCGAATGCAGGCGTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS CAA 72 bp AAACTTCTTGGGCTTTGTCTCCAACTTCACATGATGTaGTTGGAGCACGGCCCCTTGGCTCAGGCACCTCCG +
Preference number: 6 (lower is better)
Translates to: KLLGLCLQLHMM*LEHGPLAQAPP
Trigger: CGGAGGTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp TTCTTGCCCAAAAACAGGTGCTTGAGGGACTTGTTCTaGCCAAGTGCAGGCACCAGTGTCAGGAGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: FLPKNRCLRDLF*PSAGTSVRRSE
Trigger: CTCGGACCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp GCCTTGACATTGAAGTTCTTGCCCAAAAACAGGTGCTTGAGGGACTaGTTCTTGCCAAGTGCAGGCACCAGTGTCAGGAGGTCCGAGTCG +
Preference number: 6 (lower is better)
Translates to: ALTLKFLPKNRCLRD*FLPSAGTSVRRSES
Trigger: CGACTCGGACCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS TCA 72 bp TCCTCAAACTTCTTGGGCTTTGTCTCCAACTTCACATaGTGTTGTTGGAGCACGGCCCCTTGGCTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: SSNFLGFVSNFT*CCWSTAPWLRH
Trigger: GTGCCTGAGCCAAGGGGCCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp TCAGGGCCAGCACTCGGTCCTCAAACTTCTTGGGCTTaGTCTCCAACTTCACATGATGTTGTTGGAGCACGG +
Preference number: 6 (lower is better)
Translates to: SGPALGPQTSWA*SPTSHDVVGAR
Trigger: CCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCGAGTGCTGGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342740.6
ENST00000646442.2
CDS CAA 72 bp GACACCGGCCGAATCTTGCGGCAGCGTTTCTGCTTTTaGATGGCCATGGTGTCAATGTTGGTCCCAAGTTCA +
Preference number: 6 (lower is better)
Translates to: DTGRILRQRFCF*MAMVSMLVPSS
Trigger: TGAACTTGGGACCAACATTGACACCATGGCCATCAAAAAGCAGAAACGCTGCCGCAAGATTCGGCCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp ACAGTGCTTCCATGCACCCAACTCAGGTACTTTTCTTaGTCCATGCCTCCGAGGAGGCCCTGCTATCCCATT +
Preference number: 6 (lower is better)
Translates to: TVLPCTQLRYFS*SMPPRRPCYPI
Trigger: AATGGGATAGCAGGGCCTCCTCGGAGGCATGGACAAAGAAAAGTACCTGAGTTGGGTGCATGGAAGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS CAA 90 bp ACATTGAAGTTCTTGCCCAAAAACAGGTGCTTGAGGGACTTGTTCTaGCCAAGTGCAGGCACCAGTGTCAGGAGGTCCGAGTCGAACCCA +
Preference number: 6 (lower is better)
Translates to: TLKFLPKNRCLRDLF*PSAGTSVRRSESNP
Trigger: TGGGTTCGACTCGGACCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 90 bp AGGGTCTTGGCCTTGACATTGAAGTTCTTGCCCAAAAACAGGTGCTaGAGGGACTTGTTCTTGCCAAGTGCAGGCACCAGTGTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RVLALTLKFLPKNRC*RDLFLPSAGTSVRR
Trigger: CCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAAGGCCAAGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp TTGAAGTTCTTGCCCAAAAACAGGTGCTTGAGGGACTaGTTCTTGCCAAGTGCAGGCACCAGTGTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LKFLPKNRCLRD*FLPSAGTSVRR
Trigger: CCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp ACCTGCCTAAGTCACAAAACTGTTAGTGGCAGAGCCTaGGACACTAAGGCTTCCCCACTTTCTGGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: TCLSHKTVSGRA*DTKASPLSGQC
Trigger: GCACTGACCAGAAAGTGGGGAAGCCTTAGTGTCCAAGGCTCTGCCACTAACAGTTTTGTGACTTAGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1
CDS TCA 72 bp CTTTGGTTTGGTGAGTGGTGGCACCCAGACCCAGAATaGAAGAACTCTAGGGGCAATGAAAACTGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: LWFGEWWHPDPE*KNSRGNENWEE
Trigger: TTCCTCCCAGTTTTCATTGCCCCTAGAGTTCTTTCATTCTGGGTCTGGGTGCCACCACTCACCAAACCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560349.1
ENST00000645304.1
CDS GCA 72 bp TTGGCCTTGACATTGAAGTTCTTGCCCAAAAACAGGTaGTTGAGGGACTTGTTCTTGCCAAGTGCAGGCACC +
Preference number: 6 (lower is better)
Translates to: LALTLKFLPKNR*LRDLFLPSAGT
Trigger: GGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAAGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS CAA 72 bp GCCTTGACATTGAAGTTCTTGCCCAAAAACAGGTGCTaGAGGGACTTGTTCTTGCCAAGTGCAGGCACCAGT +
Preference number: 6 (lower is better)
Translates to: ALTLKFLPKNRC*RDLFLPSAGTS
Trigger: ACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGTTTTTGGGCAAGAACTTCAATGTCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342740.6
ENST00000559694.5
ENST00000646194.1
ENST00000646442.2
CDS TCA 72 bp CACTGGGTCTTAGTCCACTCTCAAGGAGAGGAGAATTaGAATGACCAATGTTCCCAAGAACCCTGGGTCCTA +
Preference number: 6 (lower is better)
Translates to: HWVLVHSQGEEN*NDQCSQEPWVL
Trigger: TAGGACCCAGGGTTCTTGGGAACATTGGTCATTTCAATTCTCCTCTCCTTGAGAGTGGACTAAGACCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559694.5
ENST00000646194.1