RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARMIL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000079691

Ensembl transcript IDs: ENST00000329474.7, ENST00000461945.1, ENST00000497227.1, ENST00000635618.1

Found 573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCCCAGCTTCTCCTTGAAACATTTGTTGGCTGTGACTTCCTGTaGCCAATTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGT +
Preference number: 1 (lower is better)
Translates to: WPQLLLETFVGCDFL*PIAFTSSSAMVEYS
Trigger: ACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAGTCACAGCCAACAAATGTTTCAAGGAGAAGCTGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR TCA 90 bp AAATCAGCCATGGGCCTCTCTCACTCTGTTCTTAGCTGTGCTCGTTaGTGGTATGCAAAGGTCACCGACCAAGCTTTAAATGTACAATTC +
Preference number: 1 (lower is better)
Translates to: KSAMGLSHSVLSCAR*WYAKVTDQALNVQF
Trigger: GAATTGTACATTTAAAGCTTGGTCGGTGACCTTTGCATACCATCAACGAGCACAGCTAAGAACAGAGTGAGAGAGGCCCATGGCTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR CCA 90 bp GCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTaGTGTTACTTGTGTGAGTGTGTGTCCAGTTATTTCATTTATCTC +
Preference number: 1 (lower is better)
Translates to: ADLTQVHLAVLRGLL*CYLCECVSSYFIYL
Trigger: GAGATAAATGAAATAACTGGACACACACTCACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR TCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCCCTTGGTTCCTCTCTaGTGGCTACCAAAGCACCCT +
Preference number: 2 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLPLVPL*WLPKHP
Trigger: AGGGTGCTTTGGTAGCCATCAGAGAGGAACCAAGGG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTACTCCTGGGCCTGCTaGCCCCAGCTTCTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: KAPREERLGRKDVALGSSYSWAC*PQLLLE
Trigger: TTCAAGGAGAAGCTGGGGCCAGCAGGCCCAGGAGTA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR GCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGGCTACCAAAGCACCCTaGACAGGAAGACTTCTGCGT +
Preference number: 2 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLATKAP*TGRLLR
Trigger: ACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGC...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCCAGAGAAGAACGCCTaGGAAGAAAAGATGTTGCCC +
Preference number: 2 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLPEKNA*EEKMLP
Trigger: GGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR GCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCTTCCTGTGCCCAATTaGATTCACTTCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: PREERLGRKDVALGSSLMLPVPN*IHFLFC
Trigger: GCAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAAAAGATGTTGCCCTTaGTTCCTCTCTGATGGCTAC +
Preference number: 2 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWKRCCP*FLSDGY
Trigger: GTAGCCATCAGAGAGGAACCAAGGGCAACATCTTTT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR GCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGGGGAAGAAAAGATGTTaGCCTTGGTTCCTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLGKKRC*PWFLSD
Trigger: ATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCC...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGAAAAGATGTTGCCCTTaGTTCCTCTCTGATGGCTAC +
Preference number: 2 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLKRCCP*FLSDGY
Trigger: GTAGCCATCAGAGAGGAACCAAGGGCAACATCTTTT...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR GCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTGGCCCATGGGATAATTaGTGGCTTTCATTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: KAPREERLGRKDVALGSSGPWDN*WLSLKA
Trigger: TGCCTTTAATGAAAGCCAGCAATTATCCCATGGGCC...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCCTCTTCTGCAATGGTaGAGTACAGTTTTGAAGATC +
Preference number: 2 (lower is better)
Translates to: PREERLGRKDVALGSSLMPLLQW*STVLKI
Trigger: GATCTTCAAAACTGTACTCCACCATTGCAGAAGAGG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCTTCCTCTTCTGCAATaGTGGAGTACAGTTTTGAAG +
Preference number: 2 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLLPLLQ*WSTVLK
Trigger: CTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR TCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAACCCTTGGTTCCTCTCTaGTGGCTACCAAAGCACCCT +
Preference number: 2 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKPLVPL*WLPKHP
Trigger: AGGGTGCTTTGGTAGCCATCAGAGAGGAACCAAGGG...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTAACATTTGTTGGCTGTaGCTTCCTGTGCCCAATTGC +
Preference number: 2 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSNICWL*LPVPNC
Trigger: GCAATTGGGCACAGGAAGTCACAGCCAACAAATGTT...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR GCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGGGAAGAAAAGATGTTaGCCTTGGTTCCTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCGKKRC*PWFLSD
Trigger: ATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR GCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCAGTACTCCGAGGTCTaGTGTGGTGTTACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTQYSEV*CGVTCV
Trigger: CACACAAGTAACACCACAGCAGACCTCGGAGTACTG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR CCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCTCCGAGGTCTGCTGTaGTGTTACTTGTGTGAGTGT +
Preference number: 2 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTLRGLL*CYLCEC
Trigger: ACACTCACACAAGTAACACCACAGCAGACCTCGGAG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR CCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAATCTTTTCCCTCTACTaGAAGGCTTGCCACTGTCAT +
Preference number: 2 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGIFSLY*KACHCH
Trigger: ATGACAGTGGCAAGCCTTCCAGTAGAGGGAAAAGAT...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR GCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTATTCACTTCCTCTTCTaGAATGGTGGAGTACAGTTT +
Preference number: 2 (lower is better)
Translates to: KAPREERLGRKDVALGSSIHFLF*NGGVQF
Trigger: AAACTGTACTCCACCATTGCAGAAGAGGAAGTGAAT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR CAA 90 bp AGCTTCTCCTTGAAACATTTGTTGGCTGTGACTTCCTGTGCCCAATaGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAG +
Preference number: 2 (lower is better)
Translates to: SFSLKHLLAVTSCAQ*HSLPLLQWWSTVLK
Trigger: CTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAGTCACAGCCAACAAATGTTTCAAGGAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR TCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGTGGTGTTACTTGTGTaGGTGTGTGTCCAGTTATTT +
Preference number: 2 (lower is better)
Translates to: CYIESCADLTQVHLAVLRVVLLV*VCVQLF
Trigger: AAATAACTGGACACACACTCACACAAGTAACACCAC...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR GCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTAATAAACTCTTTTTCTaGTTCTTCCCCGGAGTCATT +
Preference number: 2 (lower is better)
Translates to: KAPREERLGRKDVALGSSNKLFF*FFPGVI
Trigger: AATGACTCCGGGGAAGAAGCAGAAAAAGAGTTTATT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTACCAGAGAAGAACGCCTaGGAAGAAAAGATGTTGCCC +
Preference number: 2 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVPEKNA*EEKMLP
Trigger: GGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGG...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR CAA 90 bp TTGCATACATCAAGAATAAATTGCTATATTGAGTCCTGTGCGGATTaGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: LHTSRINCYIESCAD*TQVHLAVLRGLLWC
Trigger: ACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCAATTTATTCTTGATGTATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR TCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTTAGATTTGCTGCCTTaGTGGCCATCTTTACTGGAG +
Preference number: 2 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFLDLLP*WPSLLE
Trigger: CTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGCCACTGTCATGATCTaGATGTCTTTTGTAATAATC +
Preference number: 2 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSATVMI*MSFVII
Trigger: GATTATTACAAAAGACATTCAGATCATGACAGTGGC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR GCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCACATCAAGAATAAATTaGTATATTGAGTCCTGTGCG +
Preference number: 2 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTTSRIN*YIESCA
Trigger: CGCACAGGACTCAATATAGCAATTTATTCTTGATGT...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR GCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTATGTTTAGAAATCAAATaGAAAGGGTTGGAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVCLEIK*KGLEED
Trigger: GTCTTCCTCCAACCCTTTGCATTTGATTTCTAAACA...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR GCA 72 bp AGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTaGCCTTGGTTCCTCTCTGATGGCTACCAAAGCACC +
Preference number: 3 (lower is better)
Translates to: STQRRTPGKKRC*PWFLSDGYQST
Trigger: GGTGCTTTGGTAGCCATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
3UTR-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTGGCCCCAGCTTCTCCTaGAAACATTTGTTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: KAPREERLGRKDVALGSSGPSFS*KHLLAV
Trigger: CACAGCCAACAAATGTTTCAAGGAGAAGCTGGGGCC...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR TCA 72 bp TCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTaGTGGCCATCTTTACTGGAGGACCGTTGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: SASSPESLDLLP*WPSLLEDRCFC
Trigger: ACAAAAGCAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR TCA 72 bp ATGGGCCTCTCTCACTCTGTTCTTAGCTGTGCTCGTTaGTGGTATGCAAAGGTCACCGACCAAGCTTTAAAT +
Preference number: 3 (lower is better)
Translates to: MGLSHSVLSCAR*WYAKVTDQALN
Trigger: ATTTAAAGCTTGGTCGGTGACCTTTGCATACCATCAACGAGCACAGCTAAGAACAGAGTGAGAGAGGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR CCA 72 bp ACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTaGTGTTACTTGTGTGAGTGTGTGTCCAGTTATTTC +
Preference number: 3 (lower is better)
Translates to: TQVHLAVLRGLL*CYLCECVSSYF
Trigger: GAAATAACTGGACACACACTCACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR GCA 72 bp CTTCTCCTTGAAACATTTGTTGGCTGTGACTTCCTGTaGCCAATTGCATTCACTTCCTCTTCTGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: LLLETFVGCDFL*PIAFTSSSAMV
Trigger: CACCATTGCAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAGTCACAGCCAACAAATGTTTCAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTATCAAATGCAAAGGGTaGGAGGAAGACCAAACAAAT +
Preference number: 3 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCIKCKG*EEDQTN
Trigger: ATTTGTTTGGTCTTCCTCCAACCCTTTGCATTTGAT...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTTGGTGGAGTACAGTTTaGAAGATCTTTTCCCTCTAC +
Preference number: 3 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTWWSTV*KIFSLY
Trigger: GTAGAGGGAAAAGATCTTCAAAACTGTACTCCACCA...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTTTACTGGAGGACCGTaGCTTTTGTTCTTGATACTC +
Preference number: 3 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINFTGGP*LLFLIL
Trigger: GAGTATCAAGAACAAAAGCAACGGTCCTCCAGTAAA...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR CCA 72 bp GATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTaGAGGACTGTAAACTTCTATCTTATTCCACGTGCA +
Preference number: 3 (lower is better)
Translates to: DCKGTKNAETKH*RTVNFYLIPRA
Trigger: TGCACGTGGAATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
3UTR-3UTR CAA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTACCAAACAAATGTGCTTaGATTACCAAGAAATGGATC +
Preference number: 3 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVPNKCA*ITKKWI
Trigger: GATCCATTTCTTGGTAATCAAAGCACATTTGTTTGG...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGGCGGCTGTGGCGCCTaGTCCTCCTCCCGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCGGCGA*SSSRLA
Trigger: AGCGAGCCGGGAGGAGGAGCAGGCGCCACAGCCGCC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGGCAGCACAGACCGCTaGTTGGGTGGGTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTGSTDR*LGGLLL
Trigger: AAGCAGCAACCCACCCAAGCAGCGGTCTGTGCTGCC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGCCCTGCCTGTGGGCTaGTCTTGCTGTCACTCCGTT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTALPVG*SCCHSV
Trigger: AACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGCGGTTCTTGGTTTCTaGGGGATGACGGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTAVLGF*GMTGRA
Trigger: AGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCGGATTTGCTGCTGCTaGTACATGACGCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTRICCC*YMTPPR
Trigger: GCGAGGAGGCGTCATGTAGCAGCAGCAGCAAATCCG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCGGGATGACGGGCCGTaGTGCCAGACTGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLRDDGP*CQTGFG
Trigger: CCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCAGCTCTCCTCGGTCATaGTTGCCCTGTAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTSSPRS*LPCRCG
Trigger: CCCACACCTACAGGGCAACCATGACCGAGGAGAGCT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGCCTCCGCCCTGCCTGTaGGCTGCTCTTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWPPPCL*AALAVT
Trigger: AGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGG...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGCCACTGCCCATCACCTaGACCCCATACCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWPLPIT*TPYLRP
Trigger: AGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGG...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGTCCTGGGGCTGGGCTaGGGGCTACTCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMVLGLG*GLLWPS
Trigger: AGATGGCCAGAGTAGCCCCCAGCCCAGCCCCAGGAC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGGTCCTGGGGCTGGGCTaGGGGCTACTCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLVLGLG*GLLWPS
Trigger: AGATGGCCAGAGTAGCCCCCAGCCCAGCCCCAGGAC...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCAGGCGGATTTGCTGCTaGTGCTACATGACGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTRRICC*CYMTPP
Trigger: AGGAGGCGTCATGTAGCAGCAGCAGCAAATCCGCCT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTCTGGAAGACCTGGGTaGAGTTTAGGCACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTSGRPG*SLGTAP
Trigger: TGGGGCAGTGCCTAAACTGCACCCAGGTCTTCCAGA...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGATGACGGGCCGTGCTaGCAGACTGGGTTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMDDGPC*QTGFGG
Trigger: TCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGGCGGTTCTTGGTTTCTaGGGGATGACGGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWAVLGF*GMTGRA
Trigger: AGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGC...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGGCTGGGGGCTACTCTaGCCATCTCTCTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTGWGLL*PSLSLS
Trigger: AGACAAAGAGAGAGATGGCCAGAGTAGCCCCCAGCC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGGCAGCACAGACCGCTaGTTGGGTGGGTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMGSTDR*LGGLLL
Trigger: AAGCAGCAACCCACCCAAGCAGCGGTCTGTGCTGCC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCTATCCGTTCAGAATTaGCATTGTGCTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTLSVQN*HCARRP
Trigger: AGGCCGCCGAGCACAATGGCAATTCTGAACGGATAG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTAGAGACGCTGTGCGGTaGTGCGGTGGCGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLIRDAVR*CGGGGG
Trigger: CCCGCCGCCGCCACCGCAGCACCGCACAGCGTCTCT...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGTCCCACAGCGCCTaGAGACTAGCCAGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSLSHSA*RLARRS
Trigger: TGAGCGCCTGGCTAGTCTCCAGGCGCTGTGGGACAG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCAGACCGCTGCTTGGGTaGGTTGCTGCTTCTTATTCC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTRPLLG*VAASYS
Trigger: GGAATAAGAAGCAGCAACCCACCCAAGCAGCGGTCT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGTTCTCTGGAAGACCTaGGTGCAGTTTAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTVLWKT*VQFRHC
Trigger: GCAGTGCCTAAACTGCACCCAGGTCTTCCAGAGAAC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGCCAGACTGGGTTTaGGGGACTGCAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSLPDWV*GTAGGA
Trigger: AGCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGCAGTTCCCGGCGGCTaGATAAGGAGCGGACCGGAT +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCAVPGG*IRSGPD
Trigger: ATCCGGTCCGCTCCTTATTCAGCCGCCGGGAACTGC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTACTTGAGCACCTCCTaGTCTCAGCTCACAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTYLSTS*SQLTVA
Trigger: AGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTA...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGCTGGGTGGTGCTGGTaGCAATACCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCAGWCW*QYPAAG
Trigger: GCCTGCAGCAGGGTATTGTCACCAGCACCACCCAGC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCCACAGGTGGACTTCTaGCTGCCCCTTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLPQVDF*LPLLVR
Trigger: CCTCACCAAAAGGGGCAGTCAGAAGTCCACCTGTGG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGCGAGGCGGATTTGCTaGTGCTGCTACATGACGCCT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMARRIC*CCYMTP
Trigger: AGGCGTCATGTAGCAGCAGCAGCAAATCCGCCTCGC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTCTGGAAGACCTGGGTaGAGTTTAGGCACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWSGRPG*SLGTAP
Trigger: TGGGGCAGTGCCTAAACTGCACCCAGGTCTTCCAGA...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTCCAGGAGAGACGCTGTaGGGTGCTGCGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLIPGETL*GAAVAA
Trigger: CGCCGCCACCGCAGCACCGCACAGCGTCTCTCCTGG...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGGATAGTAAGCCACTaGCTCCCGCCCAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWWIVSH*LPPKMH
Trigger: GTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCA...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGATGGAACGTTTAACTaGCTTCTCCTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTDGTFN*LLLSQL
Trigger: GAGCTGGCTGAGGAGAAGCCAGTTAAACGTTCCATC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGATGAGCTCCGAGACCTaGAGCCTGCTTCCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLMSSET*SLLPLW
Trigger: CCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCAT...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGCCGTGCTGCCAGACTaGGTTTGGGGGACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGAVLPD*VWGTAG
Trigger: TCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGC...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGAATCTCCAAGTAGCTaGAGGTTAACTCGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTESPSS*RLTRAW
Trigger: CCAAGCTCGAGTTAACCTTCAGCTACTTGGAGATTC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGCTGGGTGGTGCTGGTaGCAATACCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINAGWCW*QYPAAG
Trigger: GCCTGCAGCAGGGTATTGTCACCAGCACCACCCAGC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACCGTAGGTGTGCTGGATaGGCTCCGAGACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINRRCAG*APRPGA
Trigger: GGCTCCAGGTCTCGGAGCTCATCCAGCACACCTACG...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGCTTGGGTGGGTTGCTaGTTCTTATTCCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTAWVGC*FLFLFG
Trigger: GCCAAAAAGGAATAAGAAGCAGCAACCCACCCAAGC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAGCCCTGCCTGTGGGCTaGTCTTGCTGTCACTCCGTT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIALPVG*SCCHSV
Trigger: AACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGC...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATACTGCCAGCAGACCACTaGCCATCACCTGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKILPADH*PSPGPH
Trigger: ATGGGGTCCAGGTGATGGGCAGTGGTCTGCTGGCAG...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTTCCCAAGCTTCTTCTaGGCACACGCAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWFPSFF*AHAALF
Trigger: GAAGAGAGCTGCGTGTGCGCAGAAGAAGCTTGGGAA...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGTGACGCCATCTTCATaGAAATGCTGCACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTVTPSS*KCCTSQ
Trigger: CTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCAC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCATTCTTCCAGTCGATTaGACCTACTCACCACCCTCA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTILPVD*TYSPPS
Trigger: TGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAAT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCTGTCAATCATCTGCTaGGTGGTGCTGGTGACAATA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTLSIIC*VVLVTI
Trigger: TATTGTCACCAGCACCACCCAGCAGATGATTGACAG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCAGCAGCATCAACCATaGACTCAAGCAACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTQQHQP*TQATPL
Trigger: TAAAGGCGTTGCTTGAGTCCATGGTTGATGCTGCTG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGGGACAGTCCACAGGTaGACTTCTGACTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMGTVHR*TSDCPF
Trigger: AAAGGGGCAGTCAGAAGTCCACCTGTGGACTGTCCC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTCCTCCGCCCTGCCTGTaGGCTGCTCTTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSPPPCL*AALAVT
Trigger: AGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGG...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCGCTCAAAGCTGGGCTaGAAGAATCCTGGGATACGG +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLRSKLG*KNPGIR
Trigger: CCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
3UTR CAA 72 bp TTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTaGCTTTTGTTCTTGATACTCCTGGGCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FAALMAIFTGGP*LLFLILLGLLA
Trigger: GGCCAGCAGGCCCAGGAGTATCAAGAACAAAAGCAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGCTGCTGCTGCTACATaGCGCCTCCTCGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTAAAAT*RLLAVP
Trigger: GGGAACTGCGAGGAGGCGTCATGTAGCAGCAGCAGC...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCCTATTTCTTCCCCTTaGCTCTCTTCAAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTPISSP*LSSKES
Trigger: TGACTCCTTTGAAGAGAGTCAAGGGGAAGAAATAGG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCGTTGCTTTTGTTCTTaGTACTCCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMRCFCS*YSWACW
Trigger: CCAGCAGGCCCAGGAGTATCAAGAACAAAAGCAACG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCCCTTGGTTCCTCTCTaGTGGCTACCAAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSPLVPL*WLPKHP
Trigger: AGGGTGCTTTGGTAGCCATCAGAGAGGAACCAAGGG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGTTCCCAAGCTTCTTCTaGGCACACGCAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLFPSFF*AHAALF
Trigger: GAAGAGAGCTGCGTGTGCGCAGAAGAAGCTTGGGAA...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGACCGAGACCTGGAGCCTaGTTCCGCTTTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRPRPGA*FRFGFC
Trigger: GCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGG...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACCCGAGACCTGGAGCCTaGTTCCGCTTTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINPRPGA*FRFGFC
Trigger: GCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGG...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGATGACGGGCCGTGCTaGCAGACTGGGTTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTDDGPC*QTGFGG
Trigger: TCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATC...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGGGATGACGGGCCGTaGTGCCAGACTGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNRDDGP*CQTGFG
Trigger: CCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCG...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGGGAAGAAAAGATGTTaGCCTTGGTTCCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTGKKRC*PWFLSD
Trigger: ATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGCAGTACTCCGAGGTCTaGTGTGGTGTTACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWQYSEV*CGVTCV
Trigger: CACACAAGTAACACCACAGCAGACCTCGGAGTACTG...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTGCTCAGCCACGGTCTaGCTGTCCCACAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNCSATV*LSHSAW
Trigger: CCAGGCGCTGTGGGACAGCCAGACCGTGGCTGAGCA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTTGCTCAGCCACGGTCTaGCTGTCCCACAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLICSATV*LSHSAW
Trigger: CCAGGCGCTGTGGGACAGCCAGACCGTGGCTGAGCA...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCGCAGCATTCGGCTATaGATACTCTTCCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTRSIRL*ILFLLD
Trigger: ATCCAAAAGGAAGAGTATCCATAGCCGAATGCTGCG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTACGCCGCTCAAAGCTaGGCTGGAAGAATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSYAAQS*AGRILG
Trigger: TCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCAACTTTCGGGCTAGATaGAGAGTCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTNFRAR*RVWNVI
Trigger: GATGACATTCCAGACTCTCCATCTAGCCCGAAAGTT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCACCTACAGCCCTAGGTaGAAGCGGAAGGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTTYSPR*KRKAWE
Trigger: CTCCCACGCCTTCCGCTTTCACCTAGGGCTGTAGGT...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGAAGGAAGGCTCGGCATaGTGTAAGGACCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMKEGSA*CKDQHF
Trigger: AAAGTGCTGGTCCTTACATCATGCCGAGCCTTCCTT...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTTGGCACTGAGTGACTaGGAAAGGCTGTTCACCCCT +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSLALSD*ERLFTP
Trigger: AGGGGTGAACAGCCTTTCTCAGTCACTCAGTGCCAA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTGGATTGGCACTGAGTaGCTGAGAAAGGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMWIGTE*LRKAVH
Trigger: GTGAACAGCCTTTCTCAGTCACTCAGTGCCAATCCA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGGCAACAGCTATATCCTaGAAGCCTTGTGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWATAIS*KPCAVM
Trigger: CATCACTGCACAAGGCTTTCAGGATATAGCTGTTGC...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGGATTCCAGGGTCTCCTaGATTGGACTGGATAGTAAG +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWDSRVS*IGLDSK
Trigger: CTTACTATCCAGTCCAATTCAGGAGACCCTGGAATC...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAGGCGGGTCTTCGATGTaGATTGGTACCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIGGSSM*IGTSSS
Trigger: GCTGGAAGAGGTACCAATTCACATCGAAGACCCGCC...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTCCGCTTCTCCTGTCTaGGGGATGGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNSASPV*GMGRAG
Trigger: ACCCGCCCTTCCCATCCCTCAGACAGGAGAAGCGGA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTTGGTTTCTGCGGGATaGCGGGCCGTGCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFLVSAG*RAVLPD
Trigger: GTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTGGGCATGCTTCCTGTaGAAATGTCCTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINWACFL*KCPGAG
Trigger: CCCAGCCCCAGGACATTTTCACAGGAAGCATGCCCA...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCCTGAAAGGTTGATGTaGATCAAAGCCAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTPERLM*IKAREL
Trigger: TAGTTCTCTGGCTTTGATGCACATCAACCTTTCAGG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGCAGCTCTCTTCTCTTaGTTGGCTTTCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMAALFS*LAFISA
Trigger: GGCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTGCTACCAAAGCACCCTaGACAGGAAGACTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSATKAP*TGRLLR
Trigger: ACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGC...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGAGGTTAACTCGAGCTTaGTGGGGATTCGCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMRLTRA*WGFALL
Trigger: TAACAGCGCGAATCCCCACCAAGCTCGAGTTAACCT...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTCTGTCCCACAGCGCCTaGAGACTAGCCAGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLILSHSA*RLARRS
Trigger: TGAGCGCCTGGCTAGTCTCCAGGCGCTGTGGGACAG...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCATCAAGATCGTTGGTaGTCGCTCGGATTTGGACCG +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSHQDRW*SLGFGP
Trigger: CGGTCCAAATCCGAGCGACCACCAACGATCTTGATG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTCCACTGCCCATCACCTaGACCCCATACCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFPLPIT*TPYLRP
Trigger: AGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGG...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAGCCTGCTTCCGCTTTaGGTTCTGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWSLLPL*VLLWYS
Trigger: AGAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCTGCCAGACTGGGTTTaGGGGACTGCAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNLPDWV*GTAGGA
Trigger: AGCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAG...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCTCCGAGGTCTGCTGTaGTGTTACTTGTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMLRGLL*CYLCEC
Trigger: ACACTCACACAAGTAACACCACAGCAGACCTCGGAG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGCCTGATCTCAGACAATaGCCAAGCTCACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLPDLRQ*PSSQLL
Trigger: CAGCAACTGTGAGCTTGGCCATTGTCTGAGATCAGG...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACAGGCAGGTGCCTATGTaGGCCAGCACCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNRQVPM*ASTSLT
Trigger: CGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCT...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCAGATGTCTAAGCTGGTaGTGTTGTGTATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTRCLSW*CCVFQQ
Trigger: TTGCTGAAATACACAACATCACCAGCTTAGACATCT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGCAACAGCTATATCCTaGAAGCCTTGTGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMATAIS*KPCAVM
Trigger: CATCACTGCACAAGGCTTTCAGGATATAGCTGTTGC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCTCCGCTTCTCCTGTCTaGGGGATGGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSSASPV*GMGRAG
Trigger: ACCCGCCCTTCCCATCCCTCAGACAGGAGAAGCGGA...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCCACAGGTGGACTTCTaGCTGCCCCTTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTPQVDF*LPLLVR
Trigger: CCTCACCAAAAGGGGCAGTCAGAAGTCCACCTGTGG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTACGTAGGTGTGCTGGATaGGCTCCGAGACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVRRCAG*APRPGA
Trigger: GGCTCCAGGTCTCGGAGCTCATCCAGCACACCTACG...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTATTGGTTTCTGCGGGATaGCGGGCCGTGCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVLVSAG*RAVLPD
Trigger: GTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAA...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTAATGTCATCAGGCCGTaGGGCGGTTCTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCNVIRP*GGSWFL
Trigger: CAGAAACCAAGAACCGCCTCACGGCCTGATGACATT...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAATGTCATCAGGCCGTaGGGCGGTTCTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKINVIRP*GGSWFL
Trigger: CAGAAACCAAGAACCGCCTCACGGCCTGATGACATT...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTTAGATTTGCTGCCTTaGTGGCCATCTTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWLDLLP*WPSLLE
Trigger: CTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAA...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAGGTGTGGGGGTTATTaGAGGTCCAACTCTGATTTA +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWRCGGY*RSNSDL
Trigger: TAAATCAGAGTTGGACCTGCAATAACCCCCACACCT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCCTCCTCGGTCATGGTTaGCCTGTAGGTGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTLLGHG*PVGVGV
Trigger: AACCCCCACACCTACAGGGCAACCATGACCGAGGAG...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTCTGAGCTGACTTGCTaGAAACGACGCCATGAATCT +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMSELTC*KRRHES
Trigger: AGATTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGATCTTCCTCAGGCAGGTaGCTATGTGAGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRSSSGR*LCEPAP
Trigger: AGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGA...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTTCAGAATTGCCATTGTaGTCGGCGGCCTTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCSELPL*SAAFVS
Trigger: GGACACAAAGGCCGCCGAGCACAATGGCAATTCTGA...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATACTATCCGTTCAGAATTaGCATTGTGCTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKILSVQN*HCARRP
Trigger: AGGCCGCCGAGCACAATGGCAATTCTGAACGGATAG...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCCCTGTGGGCTGCTCTTaGTGTCACTCCGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTPVGCS*CHSVPP
Trigger: AGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGG...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGATCCAACTCTGATTTATaGCCCCCTGCCCTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRSNSDL*PPALPR
Trigger: TCGGGGAAGGGCAGGGGGCCATAAATCAGAGTTGGA...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCTGTCAATCATCTGCTaGGTGGTGCTGGTGACAATA +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMLSIIC*VVLVTI
Trigger: TATTGTCACCAGCACCACCCAGCAGATGATTGACAG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTGGATAGTAAGCCACTaGCTCCCGCCCAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINWIVSH*LPPKMH
Trigger: GTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCA...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTCTCCTGAATTGGACTaGATAGTAAGCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMSPELD*IVSHWL
Trigger: GAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCTCCTGTCTGAGGGATaGGAAGGGCGGGTCTTCGAT +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTLLSEG*EGRVFD
Trigger: ATCGAAGACCCGCCCTTCCCATCCCTCAGACAGGAG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGCACAGACCGCTGCTTaGGTGGGTTGCTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRAQTAA*VGCCFL
Trigger: TAAGAAGCAGCAACCCACCCAAGCAGCGGTCTGTGC...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGCACAGACCGCTGCTTaGGTGGGTTGCTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTAQTAA*VGCCFL
Trigger: TAAGAAGCAGCAACCCACCCAAGCAGCGGTCTGTGC...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTTGTGAGACTATGTTaGCAGCACAGACCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSLVRLC*QHRPLL
Trigger: AAGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGGGACAGTCCACAGGTaGACTTCTGACTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSGTVHR*TSDCPF
Trigger: AAAGGGGCAGTCAGAAGTCCACCTGTGGACTGTCCC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGGGCTGGAAGAATCCTaGGATACGGCATCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCGLEES*DTASFP
Trigger: TGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCTTTGGGTTCTGCTTTaGTATTCTTTTCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTLWVLL*YSFLVF
Trigger: GAACACCAGAAAAGAATACCAAAGCAGAACCCAAAG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGCCGTGCTGCCAGACTaGGTTTGGGGGACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKAVLPD*VWGTAG
Trigger: TCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCTACTCCTGGGCCTGCTaGCCCCAGCTTCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTYSWAC*PQLLLE
Trigger: TTCAAGGAGAAGCTGGGGCCAGCAGGCCCAGGAGTA...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGGTGATTCTTCATCTTaGATCATCTGTACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTGDSSS*IICTKL
Trigger: CAACTTAGTACAGATGATTCAAGATGAAGAATCACC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTTTTCGGTGCTGGCATaGATCAAGTCTTGTCGAATG +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMFSVLA*IKSCRM
Trigger: CATTCGACAAGACTTGATTCATGCCAGCACCGAAAA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGACTGCCCCTTTTGGTaGGGAGGGTTCTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTDCPFW*GGFFCH
Trigger: ATGACAGAAGAACCCTCCTCACCAAAAGGGGCAGTC...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCCCCTTGGTTCCTCTCTaGTGGCTACCAAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTPLVPL*WLPKHP
Trigger: AGGGTGCTTTGGTAGCCATCAGAGAGGAACCAAGGG...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATACAAGCTCACAGTTGCTaGGATCCAGAGAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIQAHSC*DPEKPL
Trigger: AAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTTG...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAAATGCGAGGCGGATTTaGTGCTGCTGCTACATGACG +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRNARRI*CCCYMT
Trigger: CGTCATGTAGCAGCAGCAGCAAATCCGCCTCGCATT...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGAGGCAGATGCAGCTTaGAAATGGAAGTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCEADAA*KWKWAR
Trigger: TCTTGCCCACTTCCATTTGCAAGCTGCATCTGCCTC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAACTGCCAGCAGACCACTaGCCATCACCTGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKLPADH*PSPGPH
Trigger: ATGGGGTCCAGGTGATGGGCAGTGGTCTGCTGGCAG...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCAATAAACTCTTTTTCTaGTTCTTCCCCGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTNKLFF*FFPGVI
Trigger: AATGACTCCGGGGAAGAAGCAGAAAAAGAGTTTATT...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR GCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGCTACCAAAGCACCCTaGACAGGAAGACTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINATKAP*TGRLLR
Trigger: ACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTCTCCTGTCTGAGGGATaGGAAGGGCGGGTCTTCGAT +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFLLSEG*EGRVFD
Trigger: ATCGAAGACCCGCCCTTCCCATCCCTCAGACAGGAG...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTCATCAAGATCGTTGGTaGTCGCTCGGATTTGGACCG +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTHQDRW*SLGFGP
Trigger: CGGTCCAAATCCGAGCGACCACCAACGATCTTGATG...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGGGCTGGAAGAATCCTaGGATACGGCATCATTCCCA +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSGLEES*DTASFP
Trigger: TGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTACCAAAGCGGTTCTCTaGAAGACCTGGGTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCTKAVL*KTWVQF
Trigger: AAACTGCACCCAGGTCTTCCAGAGAACCGCTTTGGT...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACATGAGCTCCGAGACCTaGAGCCTGCTTCCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNMSSET*SLLPLW
Trigger: CCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCAT...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTACTCCTGGGCCTGCTaGCCCCAGCTTCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFYSWAC*PQLLLE
Trigger: TTCAAGGAGAAGCTGGGGCCAGCAGGCCCAGGAGTA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGGGAAGAAGTTCCCCATaGGAGAAGGTAAAAACCATA +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWGRSSP*EKVKTI
Trigger: TATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCC...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAACGAAGGACGTTCCCTaGGAGGTCGAGGTGGACAAG +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKTKDVP*EVEVDK
Trigger: CTTGTCCACCTCGACCTCTCAGGGAACGTCCTTCGT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTAGCACAGCTAAATATTaGAGGCATCCACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSSTAKY*RHPRRR
Trigger: TCTTCTCCGTGGATGCCTTCAATATTTAGCTGTGCT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGACATCCACTCTCCCCATaGGACCATTCTGTTCACCAT +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRHPLSP*DHSVHH
Trigger: ATGGTGAACAGAATGGTCTCATGGGGAGAGTGGATG...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTCATCCACTCTCCCCATaGGACCATTCTGTTCACCAT +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSHPLSP*DHSVHH
Trigger: ATGGTGAACAGAATGGTCTCATGGGGAGAGTGGATG...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCGACTGCCCCTTTTGGTaGGGAGGGTTCTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTDCPFW*GGFFCH
Trigger: ATGACAGAAGAACCCTCCTCACCAAAAGGGGCAGTC...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTTAGATTTGCTGCCTTaGTGGCCATCTTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSLDLLP*WPSLLE
Trigger: CTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAGACTTCTGCGTGGGTaGCCTTTACACAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWRLLRG*PLHKNK
Trigger: TTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAAACATTTGTTGGCTGTaGCTTCCTGTGCCCAATTGC +
Preference number: 4 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGNICWL*LPVPNC
Trigger: GCAATTGGGCACAGGAAGTCACAGCCAACAAATGTT...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTACTTGAGCACCTCCTaGTCTCAGACAATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSYLSTS*SQTMAK
Trigger: CTTGGCCATTGTCTGAGATCAGGAGGTGCTCAAGTA...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTTCTTCCTCAGGCAGGTaGCTATGTGAGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLSSSGR*LCEPAP
Trigger: AGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGA...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGCCAGGGACAAGGACTaGAGAGGTGATTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSARDKD*RGDSSS
Trigger: AGATGAAGAATCACCTCTGCAGTCCTTGTCCCTGGC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAATTCTGTCAATCATCTaGTGGGTGGTGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIILSII*WVVLVT
Trigger: TGTCACCAGCACCACCCAGCAGATGATTGACAGAAT...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCCCTGTGGGCTGCTCTTaGTGTCACTCCGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSPVGCS*CHSVPP
Trigger: AGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGG...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGCACAGGAAGACTTCTaGGTGGGTGACCTTTACACA +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSAQEDF*VGDLYT
Trigger: TGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGGCTGTGACTTCCTGTaGCCAATTGCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINGCDFL*PIAFTS
Trigger: GGAAGTGAATGCAATTGGGCACAGGAAGTCACAGCC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAAATCTTTTCGGTGCTaGCATGAATCAAGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWKSFRC*HESSLV
Trigger: GACAAGACTTGATTCATGCCAGCACCGAAAAGATTT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCAGACCGCTGCTTGGGTaGGTTGCTGCTTCTTATTCC +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTRPLLG*VAASYS
Trigger: GGAATAAGAAGCAGCAACCCACCCAAGCAGCGGTCT...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTACGCCGCTCAAAGCTaGGCTGGAAGAATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNYAAQS*AGRILG
Trigger: TCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTACCAAAGCGGTTCTCTaGAAGACCTGGGTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSTKAVL*KTWVQF
Trigger: AAACTGCACCCAGGTCTTCCAGAGAACCGCTTTGGT...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACGGCTGGGGGCTACTCTaGCCATCTCTCTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNGWGLL*PSLSLS
Trigger: AGACAAAGAGAGAGATGGCCAGAGTAGCCCCCAGCC...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTATTGCAGGTCCAACTCTaGTTTATGGCCCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVLQVQL*FMAPCP
Trigger: AGGGCAGGGGGCCATAAATCAGAGTTGGACCTGCAA...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTCACAATCATCTGAGCTaGCTTGCTGCAAACGACGCC +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLHNHLS*LAANDA
Trigger: GGCGTCGTTTGCAGCAAGTCAGCTCAGATGATTGTG...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTAGGCAGGTGCCTATGTaGGCCAGCACCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTRQVPM*ASTSLT
Trigger: CGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCT...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTAGACAGTTTTGTGCCTaGAAGGTTGATGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSRQFCA*KVDVHQ
Trigger: TTGATGCACATCAACCTTTCAGGCACAAAACTGTCT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAACCCCTTTCAAGTTATaGTTACAAGCCAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKITPFKL*LQARPN
Trigger: ATTGGGCCTGGCTTGTAATCATAACTTGAAAGGGGT...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGAAAGCCTTGTGCAGTaGTGTTGTTCTTGTCCCATA +
Preference number: 4 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGESLVQ*CCSCPI
Trigger: TATGGGACAAGAACAACATCACTGCACAAGGCTTTC...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATATTTTCGGTGCTGGCATaGATCAAGTCTTGTCGAATG +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIFSVLA*IKSCRM
Trigger: CATTCGACAAGACTTGATTCATGCCAGCACCGAAAA...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTGGTCAGCCAGTTTATaGTGGCAATGTGAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSWSASL*WQCESA
Trigger: TGCACTCTCACATTGCCATCATAAACTGGCTGACCA...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTTCTTGCCACGTCTGCTaGAATGGTCAGCCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTSCHVC*NGQPVY
Trigger: ATAAACTGGCTGACCATTTCAGCAGACGTGGCAAGA...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAGGCGGGTCTTCGATGTaGATTGGTACCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVGGSSM*IGTSSS
Trigger: GCTGGAAGAGGTACCAATTCACATCGAAGACCCGCC...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTCGTTGCTTTTGTTCTTaGTACTCCTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFRCFCS*YSWACW
Trigger: CCAGCAGGCCCAGGAGTATCAAGAACAAAAGCAACG...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGCTTGGGTGGGTTGCTaGTTCTTATTCCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSAWVGC*FLFLFG
Trigger: GCCAAAAAGGAATAAGAAGCAGCAACCCACCCAAGC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTCAGAATTGCCATTGTaGTCGGCGGCCTTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFSELPL*SAAFVS
Trigger: GGACACAAAGGCCGCCGAGCACAATGGCAATTCTGA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAATAAACTCTTTTTCTaGTTCTTCCCCGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWNKLFF*FFPGVI
Trigger: AATGACTCCGGGGAAGAAGCAGAAAAAGAGTTTATT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGGATGCACCACCAACATaGTATAAATTTGGTAACAAC +
Preference number: 4 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWDAPPT*YKFGNN
Trigger: GTTGTTACCAAATTTATACCATGTTGGTGGTGCATC...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTCAGCAGCATCAACCATaGACTCAAGCAACGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSQQHQP*TQATPL
Trigger: TAAAGGCGTTGCTTGAGTCCATGGTTGATGCTGCTG...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGTCTTCGATGTGAATTaGTACCTCTTCCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCVFDVN*YLFQRF
Trigger: AAAGCGCTGGAAGAGGTACCAATTCACATCGAAGAC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCTTGTGAGACTATGTTaGCAGCACAGACCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTLVRLC*QHRPLL
Trigger: AAGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTGTCATCAAGATCGTTaGTGGTCGCTCGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSCHQDR*WSLGFG
Trigger: TCCAAATCCGAGCGACCACCAACGATCTTGATGACA...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTCTCTCTTCTCTTGCTTaGCTTTCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTLSSLA*LSSLPA
Trigger: TGCTGGCAGAGATGAAAGCCAAGCAAGAGAAGAGAG...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAACGCTCAAAGCTGGGCTaGAAGAATCCTGGGATACGG +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKRSKLG*KNPGIR
Trigger: CCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCG...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTAGCCTGCTTCCGCTTTaGGTTCTGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTSLLPL*VLLWYS
Trigger: AGAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCT...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTAAAAGATGTTGCCCTTaGTTCCTCTCTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCKRCCP*FLSDGY
Trigger: GTAGCCATCAGAGAGGAACCAAGGGCAACATCTTTT...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAAAAAGATGTTGCCCTTaGTTCCTCTCTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGKRCCP*FLSDGY
Trigger: GTAGCCATCAGAGAGGAACCAAGGGCAACATCTTTT...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTCAAATGCAAAGGGTTaGAGGAAGACCAAACAAATG +
Preference number: 4 (lower is better)
Translates to: PREERLGRKDVALGSSLMSNAKG*RKTKQM
Trigger: CATTTGTTTGGTCTTCCTCCAACCCTTTGCATTTGA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAATCTTTTCCCTCTACTaGAAGGCTTGCCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIIFSLY*KACHCH
Trigger: ATGACAGTGGCAAGCCTTCCAGTAGAGGGAAAAGAT...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCCTCTTCTGCAATGGTaGAGTACAGTTTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSPLLQW*STVLKI
Trigger: GATCTTCAAAACTGTACTCCACCATTGCAGAAGAGG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTACACAATCATCTGAGCTaGCTTGCTGCAAACGACGCC +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVHNHLS*LAANDA
Trigger: GGCGTCGTTTGCAGCAAGTCAGCTCAGATGATTGTG...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGTTTCCACAATCATCTaGGCTGACTTGCTGCAAACG +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTVSTII*ADLLQT
Trigger: CGTTTGCAGCAAGTCAGCTCAGATGATTGTGGAAAC...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAACTCACGTCCTCGGGTaGCGCCATCTTCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKTHVLG*RHLHGN
Trigger: ATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTACACAGGCATACATCTaGGAAAATCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLITQAYI*ENPPQG
Trigger: CCCCTGTGGTGGATTTTCTCAGATGTATGCCTGTGT...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTCAATGGATTGGCACTaGGTGACTGAGAAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTSMDWH*VTEKGC
Trigger: ACAGCCTTTCTCAGTCACTCAGTGCCAATCCATTGA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTCAGTTCTGGAGAGGTTaGGCACAGCTAAATATTGAA +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCQFWRG*AQLNIE
Trigger: TTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTG...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTCAGCTCACAGTTGCTaGGATCCAGAGAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNSAHSC*DPEKPL
Trigger: AAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTGA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCAACCTTCTAATACTTaGGCACCTCCTGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTQPSNT*APPDLS
Trigger: GCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTGGTCAGCCAGTTTATaGTGGCAATGTGAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTWSASL*WQCESA
Trigger: TGCACTCTCACATTGCCATCATAAACTGGCTGACCA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTCTTGCCACGTCTGCTaGAATGGTCAGCCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTSCHVC*NGQPVY
Trigger: ATAAACTGGCTGACCATTTCAGCAGACGTGGCAAGA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCCTGTTCACCATCTTGTaGGACTATGTTGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTLFTIL*DYVGST
Trigger: TGTGCTGCCAACATAGTCTCACAAGATGGTGAACAG...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTAACTACAGACACAGCTaGGCCTGCTTCACCATCTTC +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLINYRHS*ACFTIF
Trigger: GAAGATGGTGAAGCAGGCTCAGCTGTGTCTGTAGTT...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCTCATCTGAGCTGACTTaGTGCAAACGACGCCATGAA +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTSSELT*CKRRHE
Trigger: TTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGATGA...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACGCCAGGGACAAGGACTaGAGAGGTGATTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNARDKD*RGDSSS
Trigger: AGATGAAGAATCACCTCTGCAGTCCTTGTCCCTGGC...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACAGTGTTGATCTGCAGTaGTTTGGCCAGCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNSVDLQ*FGQHLR
Trigger: GCGAAGATGCTGGCCAAAGCACTGCAGATCAACACT...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTAGTGTTGATCTGCAGTaGTTTGGCCAGCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFSVDLQ*FGQHLR
Trigger: GCGAAGATGCTGGCCAAAGCACTGCAGATCAACACT...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATATTCCGCTTTGGGTTCTaGTTTGGTATTCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIFRFGF*FGILFW
Trigger: CCAGAAAAGAATACCAAAGCAGAACCCAAAGCGGAA...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGATCCAAAAACTCATCTTaGAGGGCAATCTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRSKNSS*RAICSC
Trigger: GCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGA...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTCGTAGTCCCAGGCTGTaGAAAGAGGAGGTATATCCA +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLRSPRL*KEEVYP
Trigger: TGGATATACCTCCTCTTTGCACAGCCTGGGACTACG...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCTTTCTATCAACTCCCTaGGAACGTCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTFLSTP*ERQSSP
Trigger: AGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAAA...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTTAACTCGAGCTTGGTaGGGATTCGCGCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTLTRAW*GFALLQ
Trigger: TTGTAACAGCGCGAATCCCCACCAAGCTCGAGTTAA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACGATGGAACGTTTAACTaGCTTCTCCTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNDGTFN*LLLSQL
Trigger: GAGCTGGCTGAGGAGAAGCCAGTTAAACGTTCCATC...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACCGCAGCATTCGGCTATaGATACTCTTCCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINRSIRL*ILFLLD
Trigger: ATCCAAAAGGAAGAGTATCCATAGCCGAATGCTGCG...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACCCTTCATTAAGCTCATaGGACTCTGAGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINPSLSS*DSEPLV
Trigger: AACAAGAGGCTCAGAGTCCCATGAGCTTAATGAAGG...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCGTTCTCTGGAAGACCTaGGTGCAGTTTAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSVLWKT*VQFRHC
Trigger: GCAGTGCCTAAACTGCACCCAGGTCTTCCAGAGAAC...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAAGGAAGACTTCTGCGTaGGTGACCTTTACACAAAAA +
Preference number: 4 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGRKTSA*VTFTQK
Trigger: TTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCT...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTGAATCTCCAAGTAGCTaGAGGTTAACTCGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLESPSS*RLTRAW
Trigger: CCAAGCTCGAGTTAACCTTCAGCTACTTGGAGATTC...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTGTTTCCACAATCATCTaGGCTGACTTGCTGCAAACG +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLVSTII*ADLLQT
Trigger: CGTTTGCAGCAAGTCAGCTCAGATGATTGTGGAAAC...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAACACAGGCATACATCTaGGAAAATCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKTQAYI*ENPPQG
Trigger: CCCCTGTGGTGGATTTTCTCAGATGTATGCCTGTGT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTAGACAGTTTTGTGCCTaGAAGGTTGATGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSRQFCA*KVDVHQ
Trigger: TTGATGCACATCAACCTTTCAGGCACAAAACTGTCT...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTTTTATGATGGCAATGTaGGAGTGCATCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTFMMAM*ECIQDF
Trigger: GAAATCCTGGATGCACTCTCACATTGCCATCATAAA...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAGACTTCTGCGTGGGTaGCCTTTACACAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIRLLRG*PLHKNK
Trigger: TTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCT...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTACTTAGCTGTGCTCGTTaGTGGTATGCAAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVLSCAR*WYAKVT
Trigger: GGTGACCTTTGCATACCATCAACGAGCACAGCTAAG...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTGCCACTGTCATGATCTaGATGTCTTTTGTAATAATC +
Preference number: 4 (lower is better)
Translates to: KAPREERLGRKDVALGSSATVMI*MSFVII
Trigger: GATTATTACAAAAGACATTCAGATCATGACAGTGGC...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGGTGGAGTACAGTTTTaGAGATCTTTTCCCTCTACT +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINGGVQF*RSFPST
Trigger: AGTAGAGGGAAAAGATCTTCAAAACTGTACTCCACC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTTCATCTGAGCTGACTTaGTGCAAACGACGCCATGAA +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLSSELT*CKRRHE
Trigger: TTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGATGA...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTAGCTTAGTGTTGATCTaGAGTGCTTTGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFSLVLI*SALASI
Trigger: GATGCTGGCCAAAGCACTGCAGATCAACACTAAGCT...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAATCCTGAAAGCCTTGTaGAGTGATGTTGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRILKAL*SDVVLV
Trigger: GACAAGAACAACATCACTGCACAAGGCTTTCAGGAT...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACATCCTGAAAGCCTTGTaGAGTGATGTTGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINILKAL*SDVVLV
Trigger: GACAAGAACAACATCACTGCACAAGGCTTTCAGGAT...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCGCTGCTTGGGTGGGTTaGTGCTTCTTATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTAAWVG*CFLFLF
Trigger: AAAAAGGAATAAGAAGCAGCAACCCACCCAAGCAGC...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGCAGCTCTCTTCTCTTaGTTGGCTTTCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKAALFS*LAFISA
Trigger: GGCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAGCACAGGAAGACTTCTaGGTGGGTGACCTTTACACA +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVAQEDF*VGDLYT
Trigger: TGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGC...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCGGCCCATGGGATAATTaGTGGCTTTCATTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTGPWDN*WLSLKA
Trigger: TGCCTTTAATGAAAGCCAGCAATTATCCCATGGGCC...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTATGCTCGTTGATGGTATaGAAAGGTCACCGACCAAGC +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVCSLMV*KGHRPS
Trigger: GCTTGGTCGGTGACCTTTGCATACCATCAACGAGCA...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTCTTCAGGGACCACACTaGAATTCTGGATTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLLQGPH*NSGFPV
Trigger: CACAGGAAATCCAGAATTGCAGTGTGGTCCCTGAAG...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAATTCACTTCCTCTTCTaGAATGGTGGAGTACAGTTT +
Preference number: 4 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGIHFLF*NGGVQF
Trigger: AAACTGTACTCCACCATTGCAGAAGAGGAAGTGAAT...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTCTTCCTGTGCCCAATTaGATTCACTTCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFLPVPN*IHFLFC
Trigger: GCAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAG...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTGTGACGCCATCTTCATaGAAATGCTGCACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLVTPSS*KCCTSQ
Trigger: CTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCAC...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTTTTCATGATTCTCACTaGAGAGAGGCCAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCFHDSH*REARKY
Trigger: ATATTTCCTGGCCTCTCTCCAGTGAGAATCATGAAA...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTGTGGAGTCCTGAGTTaGGATTATGTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNCGVLS*DYVLEH
Trigger: GTGCTCTAGCACATAATCCCAACTCAGGACTCCACA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACACCTCTATCCTCCAGTaGGTTGCCAGCAAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNTSILQ*VASKVN
Trigger: ATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGT...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTCTCCTGAATTGGACTaGATAGTAAGCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFSPELD*IVSHWL
Trigger: GAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCCCTTCATTAAGCTCATaGGACTCTGAGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTPSLSS*DSEPLV
Trigger: AACAAGAGGCTCAGAGTCCCATGAGCTTAATGAAGG...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTGTCATCAAGATCGTTaGTGGTCGCTCGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNCHQDR*WSLGFG
Trigger: TCCAAATCCGAGCGACCACCAACGATCTTGATGACA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCCCAGAGAAGAACGCCTaGGAAGAAAAGATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSPEKNA*EEKMLP
Trigger: GGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGG...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTCCTGGCCGATTCAGTTaGCTAGAGCTCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTPGRFS*LELFRD
Trigger: GTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGG...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
3UTR CAA 72 bp TTGAAACATTTGTTGGCTGTGACTTCCTGTGCCCAATaGCATTCACTTCCTCTTCTGCAATGGTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: LKHLLAVTSCAQ*HSLPLLQWWST
Trigger: TGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAGTCACAGCCAACAAATGTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTACTCACGTCCTCGGGTaGCGCCATCTTCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTTHVLG*RHLHGN
Trigger: ATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGT...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTATCTTTTCCTTTCCGGTaGGAGAAGACAGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVSFPFR*EKTVLE
Trigger: CTCCAGAACTGTCTTCTCTCACCGGAAAGGAAAAGA...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTAGATGTCTAAGCTGGTaGTGTTGTGTATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTRCLSW*CCVFQQ
Trigger: TTGCTGAAATACACAACATCACCAGCTTAGACATCT...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACGAAAGCCTTGTGCAGTaGTGTTGTTCTTGTCCCATA +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNESLVQ*CCSCPI
Trigger: TATGGGACAAGAACAACATCACTGCACAAGGCTTTC...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATATTTGTTTTTAGGGCTTaGGAAGCATCATACATAGGA +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIFVFRA*EASYIG
Trigger: TCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAA...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCGATTCCAGGGTCTCCTaGATTGGACTGGATAGTAAG +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSDSRVS*IGLDSK
Trigger: CTTACTATCCAGTCCAATTCAGGAGACCCTGGAATC...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTTTATGATGGCAATGTaGGAGTGCATCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTFMMAM*ECIQDF
Trigger: GAAATCCTGGATGCACTCTCACATTGCCATCATAAA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAATCTAAGGATTCTTGTTaGGGAAGGGTCTTGCCACGT +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKSKDSC*GRVLPR
Trigger: ACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGA...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCTCTAAGGATTCTTGTTaGGGAAGGGTCTTGCCACGT +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSSKDSC*GRVLPR
Trigger: ACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGA...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCCTGTTCACCATCTTGTaGGACTATGTTGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSLFTIL*DYVGST
Trigger: TGTGCTGCCAACATAGTCTCACAAGATGGTGAACAG...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGTGGTGTTACTTGTGTaGGTGTGTGTCCAGTTATTT +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTVVLLV*VCVQLF
Trigger: AAATAACTGGACACACACTCACACAAGTAACACCAC...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAAGCTTAGTGTTGATCTaGAGTGCTTTGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKSLVLI*SALASI
Trigger: GATGCTGGCCAAAGCACTGCAGATCAACACTAAGCT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAATTCTGTCAATCATCTaGTGGGTGGTGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKILSII*WVVLVT
Trigger: TGTCACCAGCACCACCCAGCAGATGATTGACAGAAT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTGCTGCTTGGGTGGGTTaGTGCTTCTTATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFAAWVG*CFLFLF
Trigger: AAAAAGGAATAAGAAGCAGCAACCCACCCAAGCAGC...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTTCCGCTTTGGGTTCTaGTTTGGTATTCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTFRFGF*FGILFW
Trigger: CCAGAAAAGAATACCAAAGCAGAACCCAAAGCGGAA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTAAATCTTTTCGGTGCTaGCATGAATCAAGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTKSFRC*HESSLV
Trigger: GACAAGACTTGATTCATGCCAGCACCGAAAAGATTT...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTGTCTTCGATGTGAATTaGTACCTCTTCCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFVFDVN*YLFQRF
Trigger: AAAGCGCTGGAAGAGGTACCAATTCACATCGAAGAC...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATATTGTTGACCATTTCTTaGAATCCATTTTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKILLTIS*NPFWSP
Trigger: AGGTGACCAAAATGGATTCCAAGAAATGGTCAACAA...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTACTCTCTTCTCTTGCTTaGCTTTCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVLSSLA*LSSLPA
Trigger: TGCTGGCAGAGATGAAAGCCAAGCAAGAGAAGAGAG...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR CAA 72 bp TCAAGAATAAATTGCTATATTGAGTCCTGTGCGGATTaGACACAGGTACACTTAGCAGTACTCCGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRINCYIESCAD*TQVHLAVLRGL
Trigger: CAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCAATTTATTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTACTTCTTCCCTGTATaGAAATCCAAGCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNYFFPV*KSKPVT
Trigger: TGTGACTGGCTTGGATTTTCATACAGGGAAGAAGTA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp AAAGGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTTACTTCTTCCCTGTATaGAAATCCAAGCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: KGTKNAETKHWRTVNFYLYFFPV*KSKPVT
Trigger: TGTGACTGGCTTGGATTTTCATACAGGGAAGAAGTA...AAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAACCCCTTTCAAGTTATaGTTACAAGCCAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKTPFKL*LQARPN
Trigger: ATTGGGCCTGGCTTGTAATCATAACTTGAAAGGGGT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGGTGATTCTTCATCTTaGATCATCTGTACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSGDSSS*IICTKL
Trigger: CAACTTAGTACAGATGATTCAAGATGAAGAATCACC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR TCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGATTTGTTTTTAGGGCTTaGGAAGCATCATACATAGGA +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRFVFRA*EASYIG
Trigger: TCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAA...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCCAACCTTCTAATACTTaGGCACCTCCTGATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSQPSNT*APPDLR
Trigger: TCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTG...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAAAAAAGAGTTGCAAATaGGAGGCGGATTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKKKSCK*EADLLL
Trigger: CAGCAGCAAATCCGCCTCGCATTTGCAACTCTTTTT...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
42% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCACTGGCCAGTTTTTGTaGAAAATCTGTTCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTTGQFL*KICSKS
Trigger: GGACTTAGAACAGATTTTGCACAAAAACTGGCCAGT...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCGGGAAGAAAAGATGTTaGCCTTGGTTCCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSGKKRC*PWFLSD
Trigger: ATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCC...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR GCA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTACATCAAGAATAAATTaGTATATTGAGTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCTSRIN*YIESCA
Trigger: CGCACAGGACTCAATATAGCAATTTATTCTTGATGT...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTAGGTTAACTCGAGCTTaGTGGGGATTCGCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTRLTRA*WGFALL
Trigger: TAACAGCGCGAATCCCCACCAAGCTCGAGTTAACCT...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGATGCACCACCAACATaGTATAAATTTGGTAACAAC +
Preference number: 4 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINDAPPT*YKFGNN
Trigger: GTTGTTACCAAATTTATACCATGTTGGTGGTGCATC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCCTTTGGGTTCTGCTTTaGTATTCTTTTCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTLWVLL*YSFLVF
Trigger: GAACACCAGAAAAGAATACCAAAGCAGAACCCAAAG...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACAGGAAGACTTCTGCGTaGGTGACCTTTACACAAAAA +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNRKTSA*VTFTQK
Trigger: TTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCT...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTAGTATACTTTTTCCCTaGCCGATTCAGTTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GTKNAETKHWRTVNFYLISILFP*PIQLAR
Trigger: TCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACT...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR TCA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCAATAAATTGCTATATTaGGTCCTGTGCGGATTTGAC +
Preference number: 4 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTNKLLY*VLCGFD
Trigger: GTCAAATCCGCACAGGACTCAATATAGCAATTTATT...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTTCTGAGCTGACTTGCTaGAAACGACGCCATGAATCT +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTSELTC*KRRHES
Trigger: AGATTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGA...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTCTTCATGGAAATGCTaGACTTCTCAGTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNSSWKC*TSQFPQ
Trigger: TTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR GCA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAATATCAATTCCAGACTaGTCCAACAGGACATTTTTA +
Preference number: 4 (lower is better)
Translates to: CYIESCADLTQVHLAVLRISIPD*SNRTFL
Trigger: TAAAAATGTCCTGTTGGAGCAGTCTGGAATTGATAT...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTTTAACTCGAGCTTGGTaGGGATTCGCGCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTLTRAW*GFALLQ
Trigger: TTGTAACAGCGCGAATCCCCACCAAGCTCGAGTTAA...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTATGTGCTAGAGCACTaGCCAGTTTTTGTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNYVLEH*PVFVQN
Trigger: ATTTTGCACAAAAACTGGCCAGTGCTCTAGCACATA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGCAAGGTTAATTGTGTaGAGTCCTGAGTTGGGATTA +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKARLIV*SPELGL
Trigger: TAATCCCAACTCAGGACTCCACACAATTAACCTTGC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTTGTTGACCATTTCTTaGAATCCATTTTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTLLTIS*NPFWSP
Trigger: AGGTGACCAAAATGGATTCCAAGAAATGGTCAACAA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR TCA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACTCCCTGTGGTCAAGATaGCTAAAATCTTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNSLWSR*LKSCKF
Trigger: GAATTTACAAGATTTTAGTCATCTTGACCACAGGGA...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTGCTGAGACCAAACACTaGAGGACTGTAAACTTCTAT +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTAETKH*RTVNFY
Trigger: ATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGC...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTTCTTCATGGAAATGCTaGACTTCTCAGTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTSSWKC*TSQFPQ
Trigger: TTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGA...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR GCA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCATATCAATTCCAGACTaGTCCAACAGGACATTTTTA +
Preference number: 4 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSISIPD*SNRTFL
Trigger: TAAAAATGTCCTGTTGGAGCAGTCTGGAATTGATAT...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CCA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTTTTCATGATTCTCACTaGAGAGAGGCCAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTFHDSH*REARKY
Trigger: ATATTTCCTGGCCTCTCTCCAGTGAGAATCATGAAA...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CCA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGGGAACATTCTGTATTaGATAAATCCAGATGAACAA +
Preference number: 4 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKGNILY*INPDEQ
Trigger: TTGTTCATCTGGATTTATCCAATACAGAATGTTCCC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
3UTR CAA 72 bp ATGCAAAGGGTTGGAGGAAGACCAAACAAATGTGCTTaGATTACCAAGAAATGGATCTGTTTCTATACAAAA +
Preference number: 4 (lower is better)
Translates to: MQRVGGRPNKCA*ITKKWICFYTK
Trigger: TTTTGTATAGAAACAGATCCATTTCTTGGTAATCAAAGCACATTTGTTTGGTCTTCCTCCAACCCTTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CCA 90 bp CGGCGTAGGTCGCACCCCCAGGAGAGACGCTGTGCGGTGCTGCGGTaGCGGCGGCGGGCACCGCGCCCCTCCTCGCAGCCTCCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: RRRSHPQERRCAVLR*RRRAPRPSSQPPSQ
Trigger: TTGGGAGGGAGGCTGCGAGGAGGGGCGCGGTGCCCGCCGCCGCCACCGCAGCACCGCACAGCGTCTCTCCTGGGGGTGCGACCTACGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS GCA 90 bp TTCTGCGGGATGACGGGCCGTGCTGCCAGACTGGGTTTGGGGGACTaGAGGAGGGGCTTCGGGCTCGTAGGTGTGCTGGATGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: FCGMTGRAARLGLGD*RRGFGLVGVLDELR
Trigger: TCGGAGCTCATCCAGCACACCTACGAGCCCGAAGCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 90 bp CTGGAATGTCATCAGGCCGTGAGGCGGTTCTTGGTTTCTGCGGGATaGCGGGCCGTGCTGCCAGACTGGGTTTGGGGGACTGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LECHQAVRRFLVSAG*RAVLPDWVWGTAGG
Trigger: CCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGCCTCACGGCCTGATGACATTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp TGCCAGCAGACCACTGCCCATCACCTGGACCCCATACCTCCGCCCTaGCTGTGGGCTGCTCTTGCTGTCACTCCGTTCCACCTTCCCTAT +
Preference number: 5 (lower is better)
Translates to: CQQTTAHHLDPIPPP*LWAALAVTPFHLPY
Trigger: ATAGGGAAGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGGTCTGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp GGAGAGTCTGGAATGTCATCAGGCCGTGAGGCGGTTCTTGGTTTCTaGGGGATGACGGGCCGTGCTGCCAGACTGGGTTTGGGGGACTGC +
Preference number: 5 (lower is better)
Translates to: GESGMSSGREAVLGF*GMTGRAARLGLGDC
Trigger: GCAGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGCCTCACGGCCTGATGACATTCCAGACTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 90 bp TTTGGGGGACTGCAGGAGGGGCTTCGGGCTCGTAGGTGTGCTGGATaGGCTCCGAGACCTGGAGCCTGCTTCCGCTTTGGGTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: FGGLQEGLRARRCAG*APRPGACFRFGFCF
Trigger: AAAGCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCATCCAGCACACCTACGAGCCCGAAGCCCCTCCTGCAGTCCCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp CACTGCCCATCACCTGGACCCCATACCTCCGCCCTGCCTGTGGGCTaGTCTTGCTGTCACTCCGTTCCACCTTCCCTATTTCTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: HCPSPGPHTSALPVG*SCCHSVPPSLFLPL
Trigger: AAGGGGAAGAAATAGGGAAGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp CAGACCACTGCCCATCACCTGGACCCCATACCTCCGCCCTGCCTGTaGGCTGCTCTTGCTGTCACTCCGTTCCACCTTCCCTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: QTTAHHLDPIPPPCL*AALAVTPFHLPYFF
Trigger: GAAGAAATAGGGAAGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp TCTTGCTTGGCTTTCATCTCTGCCAGCAGACCACTGCCCATCACCTaGACCCCATACCTCCGCCCTGCCTGTGGGCTGCTCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SCLAFISASRPLPIT*TPYLRPACGLLLLS
Trigger: TGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGGTCTGCTGGCAGAGATGAAAGCCAAGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp CCATCACCTGGACCCCATACCTCCGCCCTGCCTGTGGGCTGCTCTTaGTGTCACTCCGTTCCACCTTCCCTATTTCTTCCCCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: PSPGPHTSALPVGCS*CHSVPPSLFLPLDS
Trigger: AGAGTCAAGGGGAAGAAATAGGGAAGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp CTGCCCCACCTCCATCCGACCGTTCTACGCCGCTCAAAGCTGGGCTaGAAGAATCCTGGGATACGGCATCATTCCCAAGCTTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: LPHLHPTVLRRSKLG*KNPGIRHHSQASSA
Trigger: CGCAGAAGAAGCTTGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTAGAACGGTCGGATGGAGGTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTGTGCTCGGCGGCCTTaGTGTCCTTCCTGGGACAGT +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTCARRP*CPSWDS
Trigger: ACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACA...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp CCATCCGACCGTTCTACGCCGCTCAAAGCTGGGCTGGAAGAATCCTaGGATACGGCATCATTCCCAAGCTTCTTCTGCGCACACGCAGCT +
Preference number: 5 (lower is better)
Translates to: PSDRSTPLKAGLEES*DTASFPSFFCAHAA
Trigger: AGCTGCGTGTGCGCAGAAGAAGCTTGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTAGAACGGTCGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp AGGCACTGCCCCACCTCCATCCGACCGTTCTACGCCGCTCAAAGCTaGGCTGGAAGAATCCTGGGATACGGCATCATTCCCAAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RHCPTSIRPFYAAQS*AGRILGYGIIPKLL
Trigger: AAGAAGCTTGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTAGAACGGTCGGATGGAGGTGGGGCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 90 bp ACTGGAGAGAGGCCAGGAAATATCTTCCTCAGGCAGGTGCCTATGTaGGCCAGCACCTCACTCACGTCCTCGGGTGACGCCATCTTCATG +
Preference number: 5 (lower is better)
Translates to: TGERPGNIFLRQVPM*ASTSLTSSGDAIFM
Trigger: CATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGATATTTCCTGGCCTCTCTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS TCA 90 bp CGGCGGCCTTTGTGTCCTTCCTGGGACAGTCCACAGGTGGACTTCTaGCTGCCCCTTTTGGTGAGGAGGGTTCTTCTGTCATCAAGATCG +
Preference number: 5 (lower is better)
Translates to: RRPLCPSWDSPQVDF*LPLLVRRVLLSSRS
Trigger: CGATCTTGATGACAGAAGAACCCTCCTCACCAAAAGGGGCAGTCAGAAGTCCACCTGTGGACTGTCCCAGGAAGGACACAAAGGCCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp CATTCCCAAGCTTCTTCTGCGCACACGCAGCTCTCTTCTCTTGCTTaGCTTTCATCTCTGCCAGCAGACCACTGCCCATCACCTGGACCC +
Preference number: 5 (lower is better)
Translates to: HSQASSAHTQLSSLA*LSSLPADHCPSPGP
Trigger: GGGTCCAGGTGATGGGCAGTGGTCTGCTGGCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGCGTGTGCGCAGAAGAAGCTTGGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 90 bp CTTCCTGGGACAGTCCACAGGTGGACTTCTGACTGCCCCTTTTGGTaGGGAGGGTTCTTCTGTCATCAAGATCGTTGGTGGTCGCTCGGA +
Preference number: 5 (lower is better)
Translates to: LPGTVHRWTSDCPFW*GGFFCHQDRWWSLG
Trigger: TCCGAGCGACCACCAACGATCTTGATGACAGAAGAACCCTCCTCACCAAAAGGGGCAGTCAGAAGTCCACCTGTGGACTGTCCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp GCATCATTCCCAAGCTTCTTCTGCGCACACGCAGCTCTCTTCTCTTaGTTGGCTTTCATCTCTGCCAGCAGACCACTGCCCATCACCTGG +
Preference number: 5 (lower is better)
Translates to: ASFPSFFCAHAALFS*LAFISASRPLPITW
Trigger: CCAGGTGATGGGCAGTGGTCTGCTGGCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGCGTGTGCGCAGAAGAAGCTTGGGAATGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp CAACTCAGAGATAAATCCCGAGCTCCGCTTCTCCTGTCTGAGGGATaGGAAGGGCGGGTCTTCGATGTGAATTGGTACCTCTTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: QLRDKSRAPLLLSEG*EGRVFDVNWYLFQR
Trigger: GCGCTGGAAGAGGTACCAATTCACATCGAAGACCCGCCCTTCCCATCCCTCAGACAGGAGAAGCGGAGCTCGGGATTTATCTCTGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGTCCTGAGCTTAGTGTaGATCTGCAGTGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTVLSLV*ICSALA
Trigger: GGCCAAAGCACTGCAGATCAACACTAAGCTCAGGAC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCCAGGGTCTCCTGAATaGGACTGGATAGTAAGCCAC +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTPGSPE*DWIVSH
Trigger: GTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCTGTCATCAAGATCGTaGGTGGTCGCTCGGATTTGG +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTLSSRS*VVARIW
Trigger: CCAAATCCGAGCGACCACCAACGATCTTGATGACAG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTGCTGCCAGACTGGGTTaGGGGGACTGCAGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSAARLG*GDCRRG
Trigger: GCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGC...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS TCA 90 bp CAGGCAGGTGCCTATGTGAGCCAGCACCTCACTCACGTCCTCGGGTaGCGCCATCTTCATGGAAATGCTGCACTTCTCAGTTTCCACAAT +
Preference number: 5 (lower is better)
Translates to: QAGAYVSQHLTHVLG*RHLHGNAALLSFHN
Trigger: ATTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS TCA 90 bp AGAACTGGAGGCTTTAGGCCCATCAGCCACAACTACAGACACAGCTaGGCCTGCTTCACCATCTTCCGTAGTCCCAGGCTGTGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: RTGGFRPISHNYRHS*ACFTIFRSPRLCKE
Trigger: CTCTTTGCACAGCCTGGGACTACGGAAGATGGTGAAGCAGGCTCAGCTGTGTCTGTAGTTGTGGCTGATGGGCCTAAAGCCTCCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTGCTTCCCAGGGCATaGATGATGATGGTGACCTCA +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTLLPRA*MMMVTS
Trigger: TGAGGTCACCATCATCATCAATGCCCTGGGAAGCAA...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGCGGTAGGCCTGCTCTaGAAGGTATTTTCTAGTCTC +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTAVGLL*KVFSSL
Trigger: GAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGGTCTTCGATGTGAATaGGTACCTCTTCCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTGLRCE*VPLPAL
Trigger: AAGCGCTGGAAGAGGTACCAATTCACATCGAAGACC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCGGTGGTCGCTCGGATTaGGACCGGGATTTGATTAAA +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTGGRSD*DRDLIK
Trigger: TTTAATCAAATCCCGGTCCAAATCCGAGCGACCACC...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAGCCTGTGGGCTGCTCTaGCTGTCACTCCGTTCCACC +
Preference number: 5 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIACGLL*LSLRST
Trigger: GGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGC...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGCTGCCAGACTGGGTTaGGGGGACTGCAGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTAARLG*GDCRRG
Trigger: GCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGC...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS TCA 90 bp ACCTTCATCCACTCTCCCCATGAGACCATTCTGTTCACCATCTTGTaGGACTATGTTGGCAGCACAGACCGCTGCTTGGGTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TFIHSPHETILFTIL*DYVGSTDRCLGGLL
Trigger: CAGCAACCCACCCAAGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAGATGGTGAACAGAATGGTCTCATGGGGAGAGTGGATGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp TGCTTTCTATCAACTCCCTGGGAACGTCAGAGCTCTCCTCGGTCATaGTTGCCCTGTAGGTGTGGGGGTTATTGCAGGTCCAACTCTGAT +
Preference number: 5 (lower is better)
Translates to: CFLSTPWERQSSPRS*LPCRCGGYCRSNSD
Trigger: ATCAGAGTTGGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGAAATGCGAGGCGGATTaGCTGCTGCTGCTACATGAC +
Preference number: 5 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWKCEAD*LLLLHD
Trigger: GTCATGTAGCAGCAGCAGCAAATCCGCCTCGCATTT...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTTCTCCTCGGTCATGGTaGCCCTGTAGGTGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCSPRSW*PCRCGG
Trigger: ACCCCCACACCTACAGGGCAACCATGACCGAGGAGA...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCGTTCAGAATTGCCATaGTGCTCGGCGGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMRSELP*CSAAFV
Trigger: CACAAAGGCCGCCGAGCACAATGGCAATTCTGAACG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTCTATCCGTTCAGAATaGCCATTGTGCTCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMSIRSE*PLCSAA
Trigger: GGCCGCCGAGCACAATGGCAATTCTGAACGGATAGA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp GAGTCAGGTGTTTTTATCTCCTCTATCCGTTCAGAATTGCCATTGTaGTCGGCGGCCTTTGTGTCCTTCCTGGGACAGTCCACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: ESGVFISSIRSELPL*SAAFVSFLGQSTGG
Trigger: TCCACCTGTGGACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACCTGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp TGTGAGCCAGCACCTCACTCACGTCCTCGGGTGACGCCATCTTCATaGAAATGCTGCACTTCTCAGTTTCCACAATCATCTGAGCTGACT +
Preference number: 5 (lower is better)
Translates to: CEPAPHSRPRVTPSS*KCCTSQFPQSSELT
Trigger: AGTCAGCTCAGATGATTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCCGCTAATGTCCACTTaGGTCAGGGAGGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMPLMST*VREVLL
Trigger: AAGCAACACCTCCCTGACCAAAGTGGACATTAGCGG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAAGCACAGACCGCTGCTaGGGTGGGTTGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGSTDRC*GGLLLL
Trigger: AAGAAGCAGCAACCCACCCAAGCAGCGGTCTGTGCT...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGTCTTGTGAGACTATGTaGGCAGCACAGACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMSCETM*AAQTAA
Trigger: AGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAGA...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCGTTCAGAATTGCCATaGTGCTCGGCGGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSRSELP*CSAAFV
Trigger: CACAAAGGCCGCCGAGCACAATGGCAATTCTGAACG...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCGCCTGTGGGCTGCTCTaGCTGTCACTCCGTTCCACC +
Preference number: 5 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTACGLL*LSLRST
Trigger: GGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGC...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCGCAGCTCTCTTCTCTaGCTTGGCTTTCATCTCTGC +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMRSSLL*LGFHLC
Trigger: GCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGCG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGTGGCCAAGCTCACAGTaGCTGAGATCCAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLWPSSQ*LRSRET
Trigger: GGTTTCTCTGGATCTCAGCAACTGTGAGCTTGGCCA...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS TCA 90 bp CTCCGCTTCTCCTGTCTGAGGGATGGGAAGGGCGGGTCTTCGATGTaGATTGGTACCTCTTCCAGCGCTTTATCTAGATCAAACTCCATT +
Preference number: 5 (lower is better)
Translates to: LRFSCLRDGKGGSSM*IGTSSSALSRSNSI
Trigger: AATGGAGTTTGATCTAGATAAAGCGCTGGAAGAGGTACCAATTCACATCGAAGACCCGCCCTTCCCATCCCTCAGACAGGAGAAGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp TTCTATCAACTCCCTGGGAACGTCAGAGCTCTCCTCGGTCATGGTTaGCCTGTAGGTGTGGGGGTTATTGCAGGTCCAACTCTGATTTAT +
Preference number: 5 (lower is better)
Translates to: FYQLPGNVRALLGHG*PVGVGVIAGPTLIY
Trigger: ATAAATCAGAGTTGGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CCA 90 bp ATGAGCTCCGAGACCTGGAGCCTGCTTCCGCTTTGGGTTCTGCTTTaGTATTCTTTTCTGGTGTTCCCAAACCAAAGCGGTTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: MSSETWSLLPLWVLL*YSFLVFPNQSGSLE
Trigger: TTCCAGAGAACCGCTTTGGTTTGGGAACACCAGAAAAGAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTATGTCCCCCATTCCGTaGCCGCTAATGTCCACTTTG +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSMSPIP*PLMSTL
Trigger: CAAAGTGGACATTAGCGGCAACGGAATGGGGGACAT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CTCTCTGATGGCTACCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCCTTTTTGGCCTTAACTaGGTAAAGTGTTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSDGYQSTLHRKTSAWVTLFGLN*VKCSSF
Trigger: GAAGCTGGAACACTTTACCAAGTTAAGGCCAAAAAG...GGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGGTAGCCATCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCGCTGCTTGGGTGGGTaGCTGCTTCTTATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMRCLGG*LLLIPF
Trigger: AAAAGGAATAAGAAGCAGCAACCCACCCAAGCAGCG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTGTGCTCGGCGGCCTTaGTGTCCTTCCTGGGACAGT +
Preference number: 5 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTCARRP*CPSWDS
Trigger: ACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTGAGCCTGCTTCCGCTTaGGGTTCTGCTTTGGTATTC +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSEPASA*GSALVF
Trigger: GAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCTC...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 90 bp TCTACTACTCTTGTAACTTCTCCAGCCATTGATTCCAGGGTCTCCTaGATTGGACTGGATAGTAAGCCACTGGCTCCCGCCCAAGATGCA +
Preference number: 5 (lower is better)
Translates to: STTLVTSPAIDSRVS*IGLDSKPLAPAQDA
Trigger: TGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp CTTCAAAGGAGTCAGGTGTTTTTATCTCCTCTATCCGTTCAGAATTaGCATTGTGCTCGGCGGCCTTTGTGTCCTTCCTGGGACAGTCCA +
Preference number: 5 (lower is better)
Translates to: LQRSQVFLSPLSVQN*HCARRPLCPSWDSP
Trigger: TGGACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACCTGACTCCTTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp GACACACCTCTATCCTCCAGTGGGTTGCCAGCAAGGTTAATTGTGTaGAGTCCTGAGTTGGGATTATGTGCTAGAGCACTGGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: DTPLSSSGLPARLIV*SPELGLCARALASF
Trigger: AAAACTGGCCAGTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CCA 90 bp GCAGTACCTCTATCCTCCAGTGGGTTGCCAGCAAGGTTAATTGTGTaGAGTCCTGAGTTGGGATTATGTGCTAGAGCACTGGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: AVPLSSSGLPARLIV*SPELGLCARALASF
Trigger: AAAACTGGCCAGTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTCTGTCATCAAGATCGTaGGTGGTCGCTCGGATTTGG +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCLSSRS*VVARIW
Trigger: CCAAATCCGAGCGACCACCAACGATCTTGATGACAG...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTTCTATCCGTTCAGAATaGCCATTGTGCTCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTSIRSE*PLCSAA
Trigger: GGCCGCCGAGCACAATGGCAATTCTGAACGGATAGA...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAGGAGGACCGTTGCTTTaGTTCTTGATACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIGGPLL*FLILLG
Trigger: GCCCAGGAGTATCAAGAACAAAAGCAACGGTCCTCC...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGACTTCCTGTGCCCAATaGCATTCACTTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMTSCAQ*HSLPLL
Trigger: CAGAAGAGGAAGTGAATGCAATTGGGCACAGGAAGT...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS TCA 90 bp TTAACTGGCTTCTCCTCAGCCAGCTCGATCTCTAAGGATTCTTGTTaGGGAAGGGTCTTGCCACGTCTGCTGAAATGGTCAGCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: LTGFSSASSISKDSC*GRVLPRLLKWSASL
Trigger: TAAACTGGCTGACCATTTCAGCAGACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGAGATCGAGCTGGCTGAGGAGAAGCCAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp CCATTGATTCCAGGGTCTCCTGAATTGGACTGGATAGTAAGCCACTaGCTCCCGCCCAAGATGCACCACCAACATGGTATAAATTTGGTA +
Preference number: 5 (lower is better)
Translates to: PLIPGSPELDWIVSH*LPPKMHHQHGINLV
Trigger: TACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 90 bp AGGCTGTGCAAAGAGGAGGTATATCCAGCTAGTATACTTTTTCCCTaGCCGATTCAGTTGGCTAGAGCTCTTCAGGGACCACACTGCAAT +
Preference number: 5 (lower is better)
Translates to: RLCKEEVYPASILFP*PIQLARALQGPHCN
Trigger: ATTGCAGTGTGGTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACTAGCTGGATATACCTCCTCTTTGCACAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTATGGTGACCTCAGTCTaGAGTTTCGAGTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTMVTSV*SFESAR
Trigger: CCTGGCTGACTCGAAACTCAAGACTGAGGTCACCAT...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTTTGCTTCCCAGGGCATaGATGATGATGGTGACCTCA +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCLLPRA*MMMVTS
Trigger: TGAGGTCACCATCATCATCAATGCCCTGGGAAGCAA...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGACCGCTAATGTCCACTTaGGTCAGGGAGGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: CYIESCADLTQVHLAVLRPLMST*VREVLL
Trigger: AAGCAACACCTCCCTGACCAAAGTGGACATTAGCGG...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTATGTCCCCCATTCCGTaGCCGCTAATGTCCACTTTG +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTMSPIP*PLMSTL
Trigger: CAAAGTGGACATTAGCGGCAACGGAATGGGGGACAT...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGTCCTGAGCTTAGTGTaGATCTGCAGTGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: CYIESCADLTQVHLAVLRVLSLV*ICSALA
Trigger: GGCCAAAGCACTGCAGATCAACACTAAGCTCAGGAC...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGCAGTGATGTTGTTCTaGTCCCATATTACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMAVMLF*SHITVL
Trigger: CAGGACTGTAATATGGGACAAGAACAACATCACTGC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGCGGTAGGCCTGCTCTaGAAGGTATTTTCTAGTCTC +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCAVGLL*KVFSSL
Trigger: GAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACCCAGGGTCTCCTGAATaGGACTGGATAGTAAGCCAC +
Preference number: 5 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINPGSPE*DWIVSH
Trigger: GTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGG...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTCTTGTGAGACTATGTaGGCAGCACAGACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSSCETM*AAQTAA
Trigger: AGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAGA...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTGGGACTCTGAGCCTCTaGTTGACCATTTCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSGTLSL*LTISWN
Trigger: ATTCCAAGAAATGGTCAACAAGAGGCTCAGAGTCCC...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGTGGTCGCTCGGATTaGGACCGGGATTTGATTAAA +
Preference number: 5 (lower is better)
Translates to: CFFPGVIRFAALMAIFTGGGRSD*DRDLIK
Trigger: TTTAATCAAATCCCGGTCCAAATCCGAGCGACCACC...TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACCGCAGCTCTCTTCTCTaGCTTGGCTTTCATCTCTGC +
Preference number: 5 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINRSSLL*LGFHLC
Trigger: GCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGCG...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGGCCCCAGCTTCTCCTaGAAACTTCCTGTGAAAATG +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCGPSFS*KLPVKM
Trigger: CATTTTCACAGGAAGTTTCAAGGAGAAGCTGGGGCC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGGCCCCAGCTTCTCCTaGAAACATTTGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINGPSFS*KHLLAV
Trigger: CACAGCCAACAAATGTTTCAAGGAGAAGCTGGGGCC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS TCA 90 bp GTACTTCTTTTCCTTTCCGGTGAGAGAAGACAGTTCTGGAGAGGTTaGGCACAGCTAAATATTGAAGGCATCCACGGAGAAGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: VLLFLSGERRQFWRG*AQLNIEGIHGEELH
Trigger: GTGGAGCTCTTCTCCGTGGATGCCTTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTGTCTTCTCTCACCGGAAAGGAAAAGAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CCA 90 bp AGGAGGTATATCCAGCTAGTATACTTTTTCCCTGGCCGATTCAGTTaGCTAGAGCTCTTCAGGGACCACACTGCAATTCTGGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: RRYIQLVYFFPGRFS*LELFRDHTAILDFL
Trigger: CAGGAAATCCAGAATTGCAGTGTGGTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACTAGCTGGATATACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CAA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCAAGGTTAACTCGAGCTaGGTGGGGATTCGCGCTGTT +
Preference number: 5 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTKVNSS*VGIRAV
Trigger: AACAGCGCGAATCCCCACCAAGCTCGAGTTAACCTT...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTTTGTGCCTGAAAGGTaGATGTGCATCAAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSFVPER*MCIKAR
Trigger: TCTGGCTTTGATGCACATCAACCTTTCAGGCACAAA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCCTTGTGCAGTGATGTaGTTCTTGTCCCATATTACA +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMPCAVM*FLSHIT
Trigger: TGTAATATGGGACAAGAACAACATCACTGCACAAGG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAGCACAGACCGCTGCTaGGGTGGGTTGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVSTDRC*GGLLLL
Trigger: AAGAAGCAGCAACCCACCCAAGCAGCGGTCTGTGCT...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGCTTGTTGACCATTTCTaGGAATCCATTTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMLVDHF*ESILVT
Trigger: GGTGACCAAAATGGATTCCAAGAAATGGTCAACAAG...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGGATTTGGACCGGGATTaGATTAAATTGAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SCADLTQVHLAVLRGLLWDLDRD*IKLRKP
Trigger: TGGCTTTCTCAATTTAATCAAATCCCGGTCCAAATC...CCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCGGAGGACCGTTGCTTTaGTTCTTGATACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTGGPLL*FLILLG
Trigger: GCCCAGGAGTATCAAGAACAAAAGCAACGGTCCTCC...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCAATTCTTCCAGTCGATaGGACCTACTCACCACCCTC +
Preference number: 5 (lower is better)
Translates to: CTIPHQEGRSSPWEKVKTNSSSR*DLLTTL
Trigger: GAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATT...GGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCGTGTGGAGTCCTGAGTaGGGATTATGTGCTAGAGCA +
Preference number: 5 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTVWSPE*GLCARA
Trigger: TGCTCTAGCACATAATCCCAACTCAGGACTCCACAC...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCGATCTCAGCTCACAGTaGCTGAGATCCAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTDLSSQ*LRSRET
Trigger: GGTTTCTCTGGATCTCAGCAACTGTGAGCTGAGATC...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGATCATCTGTACTAAGTaGTCCAATACAGGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLIICTK*SNTGVR
Trigger: TCTGACACCTGTATTGGACAACTTAGTACAGATGAT...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGGACTCTGAGCCTCTaGTTGACCATTTCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTGTLSL*LTISWN
Trigger: ATTCCAAGAAATGGTCAACAAGAGGCTCAGAGTCCC...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTCTGATGGATTTGGACCGGGATTaGATTAAATTGAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PREERLGRKDVALGSSLMDLDRD*IKLRKP
Trigger: TGGCTTTCTCAATTTAATCAAATCCCGGTCCAAATC...CATCAGAGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTTTACTGGAGGACCGTaGCTTTTGTTCTTGATACTC +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSFTGGP*LLFLIL
Trigger: GAGTATCAAGAACAAAAGCAACGGTCCTCCAGTAAA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTATTAGATTTGCTGCCTaGATGGCCATCTTTACTGGA +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSIRFAA*MAIFTG
Trigger: TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAAT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 90 bp AAGCTGGTGATGTTGTGTATTTCAGCAATGCAACCTTCTAATACTTaGGCACCTCCTGATCTCAGACAATGGCCAAGCTCACAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KLVMLCISAMQPSNT*APPDLRQWPSSQLL
Trigger: CAGCAACTGTGAGCTTGGCCATTGTCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCATTGCTGAAATACACAACATCACCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCTATCCTCCAGTGGGTaGCCAGCAAGGTTAATTGTG +
Preference number: 5 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNLSSSG*PARLIV
Trigger: CACAATTAACCTTGCTGGCAACCCACTGGAGGATAG...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTAGTGCTTTAATCCCTTaGGGAGTTTGGCAAATTGAA +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSSALIP*GVWQIE
Trigger: TTCAATTTGCCAAACTCCCAAAGGGATTAAAGCACT...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTTTTGTGCCTGAAAGGTaGATGTGCATCAAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTFVPER*MCIKAR
Trigger: TCTGGCTTTGATGCACATCAACCTTTCAGGCACAAA...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAATGGTGACCTCAGTCTaGAGTTTCGAGTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVMVTSV*SFESAR
Trigger: CCTGGCTGACTCGAAACTCAAGACTGAGGTCACCAT...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGCAGTGATGTTGTTCTaGTCCCATATTACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTAVMLF*SHITVL
Trigger: CAGGACTGTAATATGGGACAAGAACAACATCACTGC...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGGAGGACCGTTGTTCTTGGAATCCATTTaGGTCACCTTCTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: PGVIRFAALMAIFTGGPLFLESI*VTFLVK
Trigger: TTTTACCAAGAAGGTGACCAAAATGGATTCCAAGAA...CAACGGTCCTCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTACTCTGAGCCTCTTGTaGACCATTTCTTGGAATCCA +
Preference number: 5 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSTLSLL*TISWNP
Trigger: TGGATTCCAAGAAATGGTCAACAAGAGGCTCAGAGT...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTGCTTTGGGTTCTGCTTaGGTATTCTTTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCALGSA*VFFSGV
Trigger: AACACCAGAAAAGAATACCAAAGCAGAACCCAAAGC...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCGAGCCTGCTTCCGCTTaGGGTTCTGCTTTGGTATTC +
Preference number: 5 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSEPASA*GSALVF
Trigger: GAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCTC...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACGAGTCCTGTGCGGATTaGACACAGGTACACTTAGCA +
Preference number: 5 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNESCAD*TQVHLA
Trigger: TGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTC...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTCCCTGGCCGATTCAGTaGGCTAGAGCTCTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTPWPIQ*ARALQG
Trigger: TCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGG...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTCAATTCCCTGGTGTCTaGGGTAAGATAAATTGTATC +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCQFPGV*GKINCI
Trigger: GATACAATTTATCTTACCCAAGACACCAGGGAATTG...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTGACACAGGTACACTTAGCAGTACTCCGAGGTCTGCTGTGGTGTTACTTGTGTTCTAAGCTGGTGATGTaGTGTATTTCAGCAATGCAA +
Preference number: 5 (lower is better)
Translates to: LTQVHLAVLRGLLWCYLCSKLVM*CISAMQ
Trigger: TTGCATTGCTGAAATACACAACATCACCAGCTTAGA...ACACAAGTAACACCACAGCAGACCTCGGAGTACTGCTAAGTGTACCTGTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATATCAGATTCTAAACCATaGTCAGAGATGTCTAAGCTG +
Preference number: 5 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKISDSKP*SEMSKL
Trigger: CAGCTTAGACATCTCTGACAATGGTTTAGAATCTGA...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTCCTTGTGCAGTGATGTaGTTCTTGTCCCATATTACA +
Preference number: 5 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSPCAVM*FLSHIT
Trigger: TGTAATATGGGACAAGAACAACATCACTGCACAAGG...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCGGTCTTCGATGTGAATaGGTACCTCTTCCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSGLRCE*VPLPAL
Trigger: AAGCGCTGGAAGAGGTACCAATTCACATCGAAGACC...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TTGCATTCACTTCCTCTTCTGCAATGGTGGAGTACAGTTTTGAAGATCTTTTCCCGCTGCTTGGGTGGGTaGCTGCTTCTTATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LHSLPLLQWWSTVLKIFSRCLGG*LLLIPF
Trigger: AAAAGGAATAAGAAGCAGCAACCCACCCAAGCAGCG...GGAAAAGATCTTCAAAACTGTACTCCACCATTGCAGAAGAGGAAGTGAATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp AAAGCACCCAGAGAAGAACGCCTGGGAAGAAAAGATGTTGCCCTTGGTTCCTCTTTCTTGGAATCCATTTaGGTCACCTTCTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: KAPREERLGRKDVALGSSFLESI*VTFLVK
Trigger: TTTTACCAAGAAGGTGACCAAAATGGATTCCAAGAA...AGAGGAACCAAGGGCAACATCTTTTCTTCCCAGGCGTTCTTCTCTGGGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp TTCTGCTTCTTCCCCGGAGTCATTAGATTTGCTGCCTTGATGGCCATCTTTACTGCTTTGGGTTCTGCTTaGGTATTCTTTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: FCFFPGVIRFAALMAIFTALGSA*VFFSGV
Trigger: AACACCAGAAAAGAATACCAAAGCAGAACCCAAAGC...AGTAAAGATGGCCATCAAGGCAGCAAATCTAATGACTCCGGGGAAGAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTGGTGGAGTACAGTTTaGAAGATCTTTTCCCTCTAC +
Preference number: 5 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINWWSTV*KIFSLY
Trigger: GTAGAGGGAAAAGATCTTCAAAACTGTACTCCACCA...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTTCTCCTTGAAACATTaGTTGGCTGTGACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINFSLKH*LAVTSC
Trigger: ACAGGAAGTCACAGCCAACAAATGTTTCAAGGAGAA...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp GGGACCAAAAACGCTGAGACCAAACACTGGAGGACTGTAAACTTCTATCTTATTGTAAGGACCAGCACTTaGTTTTCAACTTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: GTKNAETKHWRTVNFYLIVRTST*FSTLSP
Trigger: GGGAGACAAAGTTGAAAACAAAGTGCTGGTCCTTAC...AATAAGATAGAAGTTTACAGTCCTCCAGTGTTTGGTCTCAGCGTTTTTGGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS-3UTR CAA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGATCAGATTCTAAACCATaGTCAGAGATGTCTAAGCTG +
Preference number: 5 (lower is better)
Translates to: CYIESCADLTQVHLAVLRSDSKP*SEMSKL
Trigger: CAGCTTAGACATCTCTGACAATGGTTTAGAATCTGA...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTATATCCTGAAAGCCTaGTGCAGTGATGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HPAQEDFCVGDLYTKINSYILKA*CSDVVL
Trigger: AAGAACAACATCACTGCACAAGGCTTTCAGGATATA...AGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCAAAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAGGAGTTGAGATGATCTaGTACTTTCACACATATTCT +
Preference number: 5 (lower is better)
Translates to: PKHPAQEDFCVGDLYTKIGVEMI*YFHTYS
Trigger: AGAATATGTGTGAAAGTACAAGATCATCTCAACTCC...TATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGATGGATACTCTTCCTTTaGGATTTAGGGGTCATCATA +
Preference number: 5 (lower is better)
Translates to: CYIESCADLTQVHLAVLRWILFL*DLGVII
Trigger: TATGATGACCCCTAAATCCAAAAGGAAGAGTATCCA...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCATACCTTTACTGGAGGACCGTaGCTTTTGTTCTTGATACTC +
Preference number: 5 (lower is better)
Translates to: NSTSGRKKFPMGEGKNHTFTGGP*LLFLIL
Trigger: GAGTATCAAGAACAAAAGCAACGGTCCTCCAGTAAA...GGTATGGTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TGCTATATTGAGTCCTGTGCGGATTTGACACAGGTACACTTAGCAGTACTCCGAATCAAATGCAAAGGGTaGGAGGAAGACCAAACAAAT +
Preference number: 5 (lower is better)
Translates to: CYIESCADLTQVHLAVLRIKCKG*EEDQTN
Trigger: ATTTGTTTGGTCTTCCTCCAACCCTTTGCATTTGAT...TCGGAGTACTGCTAAGTGTACCTGTGTCAAATCCGCACAGGACTCAATATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS TCA 90 bp TCAGTGGACAGTTTTAGATCCTTAGAGGACAGTTTTGTGAACCACTaGTTATATTCCAGAGCAGCAATGATAGGTATTAGGTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SVDSFRSLEDSFVNH*LYSRAAMIGIRSLW
Trigger: CCACAGGGACCTAATACCTATCATTGCTGCTCTGGAATATAATCAGTGGTTCACAAAACTGTCCTCTAAGGATCTAAAACTGTCCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGTAAGGACCAGCACTTaGTTTTCAACTTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKVRTST*FSTLSP
Trigger: GGGAGACAAAGTTGAAAACAAAGTGCTGGTCCTTAC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AAGCACCCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACGTAGTTTTCTATCTTTaGCAGAGCGTCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: KHPAQEDFCVGDLYTKINVVFYL*QSVFCF
Trigger: AAAACAGAAGACGCTCTGCAAAAGATAGAAAACTAC...GTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGGGTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTCTTTTTGGCCTTAACTaGGTAAAGTGTTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFLFGLN*VKCSSF
Trigger: GAAGCTGGAACACTTTACCAAGTTAAGGCCAAAAAG...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACCTTGTTGACCATTTCTaGGAATCCATTTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNLVDHF*ESILVT
Trigger: GGTGACCAAAATGGATTCCAAGAAATGGTCAACAAG...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp TTTAAATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAACTCTGAGCCTCTTGTaGACCATTTCTTGGAATCCA +
Preference number: 5 (lower is better)
Translates to: FKCTIPHQEGRSSPWEKVTLSLL*TISWNP
Trigger: TGGATTCCAAGAAATGGTCAACAAGAGGCTCAGAGT...TACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTATTAGATTTGCTGCCTaGATGGCCATCTTTACTGGA +
Preference number: 5 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFIRFAA*MAIFTG
Trigger: TCCAGTAAAGATGGCCATCAAGGCAGCAAATCTAAT...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS TCA 90 bp TCAGTGGACAGTTTTAGATCCTTAGAGGACAGTTTTGTGAACCACTaGTTATATTCCAGAGCAGCAATGATAGGTATTAGGTCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SVDSFRSLEDSFVNH*LYSRAAMIGIRSLE
Trigger: TTCCAGGGACCTAATACCTATCATTGCTGCTCTGGAATATAATCAGTGGTTCACAAAACTGTCCTCTAAGGATCTAAAACTGTCCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS GCA 90 bp TGTGTAGTTCTTTTCCATAGCAACAGCTATATCCTGAAAGCCTTGTaGAGTGATGTTGTTCTTGTCCCATATTACAGTCCTGAGCTTAGT +
Preference number: 5 (lower is better)
Translates to: CVVLFHSNSYILKAL*SDVVLVPYYSPELS
Trigger: ACTAAGCTCAGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 90 bp GACTCTGTTTCCTACTTCCAAAGGAAAGAGGTTGGTATCAGAATTTaGTTGAAAAACCTCCTTGCTCTGAGAGAAATCCTACCTCTAAGT +
Preference number: 5 (lower is better)
Translates to: DSVSYFQRKEVGIRI*LKNLLALREILPLS
Trigger: ACTTAGAGGTAGGATTTCTCTCAGAGCAAGGAGGTTTTTCAAGCAAATTCTGATACCAACCTCTTTCCTTTGGAAGTAGGAAACAGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS CCA 90 bp ATCAATTCCAGACTGCTCCAACAGGACATTTTTAACAAAGGTACGTaGAATAGAAATCTTTTCGGTGCTGGCATGAATCAAGTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: INSRLLQQDIFNKGT*NRNLFGAGMNQVLS
Trigger: CGACAAGACTTGATTCATGCCAGCACCGAAAAGATTTCTATTCCACGTACCTTTGTTAAAAATGTCCTGTTGGAGCAGTCTGGAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS-3UTR CAA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTCTAAGCTGGTGATGTaGTGTATTTCAGCAATGCAA +
Preference number: 5 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFSKLVM*CISAMQ
Trigger: TTGCATTGCTGAAATACACAACATCACCAGCTTAGA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS-3UTR CAA 90 bp ATGTACAATTCCACATCAGGAAGGAAGAAGTTCCCCATGGGAGAAGGTAAAAACATCATCTGTACTAAGTaGTCCAATACAGGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: MYNSTSGRKKFPMGEGKNIICTK*SNTGVR
Trigger: TCTGACACCTGTATTGGACAACTTAGTACAGATGAT...GTTTTTACCTTCTCCCATGGGGAACTTCTTCCTTCCTGATGTGGAATTGTACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CCTGCACAGGAAGACTTCTGCGTGGGTGACCTTTACACAAAAATAAACTCTTTTTGGATACTCTTCCTTTaGGATTTAGGGGTCATACTT +
Preference number: 5 (lower is better)
Translates to: PAQEDFCVGDLYTKINSFWILFL*DLGVIL
Trigger: AAGTATGACCCCTAAATCCAAAAGGAAGAGTATCCA...AAAAGAGTTTATTTTTGTGTAAAGGTCACCCACGCAGAAGTCTTCCTGTGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS GCA 90 bp CCAAAGGAAAGAGGTTGGTATCAGAATTTGCTTGAAAAACCTCCTTaGTCTGAGAGAAATCCTACCTCTAAGTCCATACCAATAACAAGT +
Preference number: 5 (lower is better)
Translates to: PKERGWYQNLLEKPP*SERNPTSKSIPITS
Trigger: ACTTGTTATTGGTATGGACTTAGAGGTAGGATTTCTCTCAGAGCAAGGAGGTTTTTCAAGCAAATTCTGATACCAACCTCTTTCCTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS-3UTR CAA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAATATATCCTGAAAGCCTaGTGCAGTGATGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKYILKA*CSDVVL
Trigger: AAGAACAACATCACTGCACAAGGCTTTCAGGATATA...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGTAGTTTTCTATCTTTaGCAGAGCGTCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKVVFYL*QSVFCF
Trigger: AAAACAGAAGACGCTCTGCAAAAGATAGAAAACTAC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAAGGAGTTGAGATGATCTaGTACTTTCACACATATTCT +
Preference number: 5 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKGVEMI*YFHTYS
Trigger: AGAATATGTGTGAAAGTACAAGATCATCTCAACTCC...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp CATTTATCTCCAAAAACTCATCTTGCAGGGCAATCTGTAGCTGCCTCAGATAAACCAAACAAATGTGCTTaGATTACCAAGAAATGGATC +
Preference number: 5 (lower is better)
Translates to: HLSPKTHLAGQSVAASDKPNKCA*ITKKWI
Trigger: GATCCATTTCTTGGTAATCAAAGCACATTTGTTTGG...TTTATCTGAGGCAGCTACAGATTGCCCTGCAAGATGAGTTTTTGGAGATAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS-3UTR CAA 90 bp AGATCGATCATTTTTAAGATTGTAAAGGGACCAAAAACGCTGAGACCAAACACTCAATTCCCTGGTGTCTaGGGTAAGATAAATTGTATC +
Preference number: 5 (lower is better)
Translates to: RSIIFKIVKGPKTLRPNTQFPGV*GKINCI
Trigger: GATACAATTTATCTTACCCAAGACACCAGGGAATTG...AGTGTTTGGTCTCAGCGTTTTTGGTCCCTTTACAATCTTAAAAATGATCGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS GCA 72 bp GTAGGTCGCACCCCCAGGAGAGACGCTGTGCGGTGCTaGGGTGGCGGCGGCGGGCACCGCGCCCCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: VGRTPRRDAVRC*GGGGGHRAPPR
Trigger: GCGAGGAGGGGCGCGGTGCCCGCCGCCGCCACCGCAGCACCGCACAGCGTCTCTCCTGGGGGTGCGACCTAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS GCA 72 bp GGCGTAGGTCGCACCCCCAGGAGAGACGCTGTGCGGTaGTGCGGTGGCGGCGGCGGGCACCGCGCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: GVGRTPRRDAVR*CGGGGGHRAPP
Trigger: AGGAGGGGCGCGGTGCCCGCCGCCGCCACCGCAGCACCGCACAGCGTCTCTCCTGGGGGTGCGACCTACGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS CCA 72 bp TCGCACCCCCAGGAGAGACGCTGTGCGGTGCTGCGGTaGCGGCGGCGGGCACCGCGCCCCTCCTCGCAGCCT +
Preference number: 6 (lower is better)
Translates to: SHPQERRCAVLR*RRRAPRPSSQP
Trigger: AGGCTGCGAGGAGGGGCGCGGTGCCCGCCGCCGCCACCGCAGCACCGCACAGCGTCTCTCCTGGGGGTGCGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS GCA 72 bp TTTATGCTTTCTCGCGAGAGCCGGCCTCCGCACCGGTaGGAGGCCGGCCTCCGGTGCCCGAGCGCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: FMLSRESRPPHR*EAGLRCPSAGS
Trigger: GGACCCAGCGCTCGGGCACCGGAGGCCGGCCTCGCACCGGTGCGGAGGCCGGCTCTCGCGAGAAAGCATAAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS CCA 72 bp CCCTGCTCAGCCACGGTCTGGCTGTCCCACAGCGCCTaGAGACTAGCCAGGCGCTCAGATGGCTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: PCSATVWLSHSA*RLARRSDGSME
Trigger: CTCCATGGAGCCATCTGAGCGCCTGGCTAGTCTCCAGGCGCTGTGGGACAGCCAGACCGTGGCTGAGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS CAA 72 bp TTCTGCGGGATGACGGGCCGTGCTGCCAGACTGGGTTaGGGGGACTGCAGGAGGGGCTTCGGGCTCGTAGGT +
Preference number: 6 (lower is better)
Translates to: FCGMTGRAARLG*GDCRRGFGLVG
Trigger: ACCTACGAGCCCGAAGCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp CTGCAGGAGGGGCTTCGGGCTCGTAGGTGTGCTGGATaGGCTCCGAGACCTGGAGCCTGCTTCCGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: LQEGLRARRCAG*APRPGACFRFG
Trigger: CCCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCATCCAGCACACCTACGAGCCCGAAGCCCCTCCTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp GGCGGTTCTTGGTTTCTGCGGGATGACGGGCCGTGCTaGCAGACTGGGTTTGGGGGACTGCAGGAGGGGCTT +
Preference number: 6 (lower is better)
Translates to: GGSWFLRDDGPC*QTGFGGLQEGL
Trigger: AAGCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp GCCCATCACCTGGACCCCATACCTCCGCCCTGCCTGTaGGCTGCTCTTGCTGTCACTCCGTTCCACCTTCCC +
Preference number: 6 (lower is better)
Translates to: AHHLDPIPPPCL*AALAVTPFHLP
Trigger: GGGAAGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp CATCAGGCCGTGAGGCGGTTCTTGGTTTCTGCGGGATaGCGGGCCGTGCTGCCAGACTGGGTTTGGGGGACT +
Preference number: 6 (lower is better)
Translates to: HQAVRRFLVSAG*RAVLPDWVWGT
Trigger: AGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGCCTCACGGCCTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp ACCACTGCCCATCACCTGGACCCCATACCTCCGCCCTaGCTGTGGGCTGCTCTTGCTGTCACTCCGTTCCAC +
Preference number: 6 (lower is better)
Translates to: TTAHHLDPIPPP*LWAALAVTPFH
Trigger: GTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp GCTTTCATCTCTGCCAGCAGACCACTGCCCATCACCTaGACCCCATACCTCCGCCCTGCCTGTGGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: AFISASRPLPIT*TPYLRPACGLL
Trigger: GAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGATGGGCAGTGGTCTGCTGGCAGAGATGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp GTTCTTGGTTTCTGCGGGATGACGGGCCGTGCTGCCAGACTGGGTTaGGGGGACTGCAGGAGGGGCTTCGGGCTCGTAGGTGTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: VLGFCGMTGRAARLG*GDCRRGFGLVGVLD
Trigger: ATCCAGCACACCTACGAGCCCGAAGCCCCTCCTGCAGTCCCCCAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp GGAATGTCATCAGGCCGTGAGGCGGTTCTTGGTTTCTaGGGGATGACGGGCCGTGCTGCCAGACTGGGTTTG +
Preference number: 6 (lower is better)
Translates to: GMSSGREAVLGF*GMTGRAARLGL
Trigger: CAAACCCAGTCTGGCAGCACGGCCCGTCATCCCGCAGAAACCAAGAACCGCCTCACGGCCTGATGACATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp AGGCCAGGAAATATCTTCCTCAGGCAGGTGCCTATGTaGGCCAGCACCTCACTCACGTCCTCGGGTGACGCC +
Preference number: 6 (lower is better)
Translates to: RPGNIFLRQVPM*ASTSLTSSGDA
Trigger: GGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGATATTTCCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS GCA 72 bp TCACCTGGACCCCATACCTCCGCCCTGCCTGTGGGCTaGTCTTGCTGTCACTCCGTTCCACCTTCCCTATTT +
Preference number: 6 (lower is better)
Translates to: SPGPHTSALPVG*SCCHSVPPSLF
Trigger: AAATAGGGAAGGTGGAACGGAGTGACAGCAAGAGCAGCCCACAGGCAGGGCGGAGGTATGGGGTCCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp CCCACCTCCATCCGACCGTTCTACGCCGCTCAAAGCTaGGCTGGAAGAATCCTGGGATACGGCATCATTCCC +
Preference number: 6 (lower is better)
Translates to: PTSIRPFYAAQS*AGRILGYGIIP
Trigger: GGGAATGATGCCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTAGAACGGTCGGATGGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp TGCAGTGCTTTGGCCAGCATCTTCGCTCCCATGTCCCCCATTCCGTaGCCGCTAATGTCCACTTTGGTCAGGGAGGTGTTGCTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: CSALASIFAPMSPIP*PLMSTLVREVLLPR
Trigger: CCTGGGAAGCAACACCTCCCTGACCAAAGTGGACATTAGCGGCAACGGAATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp AAAAGAGTTGCAAATGCGAGGCGGATTTGCTGCTGCTaGTACATGACGCCTCCTCGCAGTTCCCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: KRVANARRICCC*YMTPPRSSRRL
Trigger: CAGCCGCCGGGAACTGCGAGGAGGCGTCATGTAGCAGCAGCAGCAAATCCGCCTCGCATTTGCAACTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS GCA 72 bp CTCCCTGGGAACGTCAGAGCTCTCCTCGGTCATGGTTaGCCTGTAGGTGTGGGGGTTATTGCAGGTCCAACT +
Preference number: 6 (lower is better)
Translates to: LPGNVRALLGHG*PVGVGVIAGPT
Trigger: AGTTGGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS GCA 72 bp CTGGAGAGAGGCCAGGAAATATCTTCCTCAGGCAGGTaGCTATGTGAGCCAGCACCTCACTCACGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: LERGQEISSSGR*LCEPAPHSRPR
Trigger: CCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGATATTTCCTGGCCTCTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS CCA 72 bp TCAACTCCCTGGGAACGTCAGAGCTCTCCTCGGTCATaGTTGCCCTGTAGGTGTGGGGGTTATTGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: STPWERQSSPRS*LPCRCGGYCRS
Trigger: GGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CAA 72 bp ACTCCCTGGGAACGTCAGAGCTCTCCTCGGTCATGGTaGCCCTGTAGGTGTGGGGGTTATTGCAGGTCCAAC +
Preference number: 6 (lower is better)
Translates to: TPWERQSSPRSW*PCRCGGYCRSN
Trigger: GTTGGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS TCA 72 bp GGCTTTAGGCCCATCAGCCACAACTACAGACACAGCTaGGCCTGCTTCACCATCTTCCGTAGTCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GFRPISHNYRHS*ACFTIFRSPRL
Trigger: CAGCCTGGGACTACGGAAGATGGTGAAGCAGGCTCAGCTGTGTCTGTAGTTGTGGCTGATGGGCCTAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS GCA 72 bp CCTCGGTCATGGTTGCCCTGTAGGTGTGGGGGTTATTaGAGGTCCAACTCTGATTTATGGCCCCCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: PRSWLPCRCGGY*RSNSDLWPPAL
Trigger: AAGGGCAGGGGGCCATAAATCAGAGTTGGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS GCA 72 bp CCAAGCTTCTTCTGCGCACACGCAGCTCTCTTCTCTTaGTTGGCTTTCATCTCTGCCAGCAGACCACTGCCC +
Preference number: 6 (lower is better)
Translates to: PSFFCAHAALFS*LAFISASRPLP
Trigger: GGGCAGTGGTCTGCTGGCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGCGTGTGCGCAGAAGAAGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp TCATCTCCACGAAGGACGTTCCCTGAGAGGTCGAGGTaGACAAGGGTAGAGGCGGTCAATGGATTGGCACTG +
Preference number: 6 (lower is better)
Translates to: SSPRRTFPERSR*TRVEAVNGLAL
Trigger: CAGTGCCAATCCATTGACCGCCTCTACCCTTGTCCACCTCGACCTCTCAGGGAACGTCCTTCGTGGAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CCA 72 bp CTCCATCCGACCGTTCTACGCCGCTCAAAGCTGGGCTaGAAGAATCCTGGGATACGGCATCATTCCCAAGCT +
Preference number: 6 (lower is better)
Translates to: LHPTVLRRSKLG*KNPGIRHHSQA
Trigger: AGCTTGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTAGAACGGTCGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp TGGTGTTCCCAAACCAAAGCGGTTCTCTGGAAGACCTaGGTGCAGTTTAGGCACTGCCCCACCTCCATCCGA +
Preference number: 6 (lower is better)
Translates to: WCSQTKAVLWKT*VQFRHCPTSIR
Trigger: TCGGATGGAGGTGGGGCAGTGCCTAAACTGCACCCAGGTCTTCCAGAGAACCGCTTTGGTTTGGGAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 72 bp TTGGCCAGCATCTTCGCTCCCATGTCCCCCATTCCGTaGCCGCTAATGTCCACTTTGGTCAGGGAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: LASIFAPMSPIP*PLMSTLVREVL
Trigger: CAACACCTCCCTGACCAAAGTGGACATTAGCGGCAACGGAATGGGGGACATGGGAGCGAAGATGCTGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp GCCTATGTGAGCCAGCACCTCACTCACGTCCTCGGGTaGCGCCATCTTCATGGAAATGCTGCACTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: AYVSQHLTHVLG*RHLHGNAALLS
Trigger: ACTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS CCA 72 bp CTCCAGCCATTGATTCCAGGGTCTCCTGAATTGGACTaGATAGTAAGCCACTGGCTCCCGCCCAAGATGCAC +
Preference number: 6 (lower is better)
Translates to: LQPLIPGSPELD*IVSHWLPPKMH
Trigger: GTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp GATAAATCCCGAGCTCCGCTTCTCCTGTCTGAGGGATaGGAAGGGCGGGTCTTCGATGTGAATTGGTACCTC +
Preference number: 6 (lower is better)
Translates to: DKSRAPLLLSEG*EGRVFDVNWYL
Trigger: GAGGTACCAATTCACATCGAAGACCCGCCCTTCCCATCCCTCAGACAGGAGAAGCGGAGCTCGGGATTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp GCTTCTTCTGCGCACACGCAGCTCTCTTCTCTTGCTTaGCTTTCATCTCTGCCAGCAGACCACTGCCCATCA +
Preference number: 6 (lower is better)
Translates to: ASSAHTQLSSLA*LSSLPADHCPS
Trigger: TGATGGGCAGTGGTCTGCTGGCAGAGATGAAAGCCAAGCAAGAGAAGAGAGCTGCGTGTGCGCAGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp CGTTCTACGCCGCTCAAAGCTGGGCTGGAAGAATCCTaGGATACGGCATCATTCCCAAGCTTCTTCTGCGCA +
Preference number: 6 (lower is better)
Translates to: RSTPLKAGLEES*DTASFPSFFCA
Trigger: TGCGCAGAAGAAGCTTGGGAATGATGCCGTATCCCAGGATTCTTCCAGCCCAGCTTTGAGCGGCGTAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp TTGTGTCCTTCCTGGGACAGTCCACAGGTGGACTTCTaGCTGCCCCTTTTGGTGAGGAGGGTTCTTCTGTCA +
Preference number: 6 (lower is better)
Translates to: LCPSWDSPQVDF*LPLLVRRVLLS
Trigger: TGACAGAAGAACCCTCCTCACCAAAAGGGGCAGTCAGAAGTCCACCTGTGGACTGTCCCAGGAAGGACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp CCAGGGTCTCCTGAATTGGACTGGATAGTAAGCCACTaGCTCCCGCCCAAGATGCACCACCAACATGGTATA +
Preference number: 6 (lower is better)
Translates to: PGSPELDWIVSH*LPPKMHHQHGI
Trigger: TATACCATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 72 bp CTGGATGAGCTCCGAGACCTGGAGCCTGCTTCCGCTTaGGGTTCTGCTTTGGTATTCTTTTCTGGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: LDELRDLEPASA*GSALVFFSGVP
Trigger: GGGAACACCAGAAAAGAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp CCGCTAATGTCCACTTTGGTCAGGGAGGTGTTGCTTCCCAGGGCATaGATGATGATGGTGACCTCAGTCTTGAGTTTCGAGTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PLMSTLVREVLLPRA*MMMVTSVLSFESAR
Trigger: CCTGGCTGACTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGGGAAGCAACACCTCCCTGACCAAAGTGGACATTAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp ACTTGCTGCAAACGACGCCATGAATCTCCAAGTAGCTaGAGGTTAACTCGAGCTTGGTGGGGATTCGCGCTG +
Preference number: 6 (lower is better)
Translates to: TCCKRRHESPSS*RLTRAWWGFAL
Trigger: CAGCGCGAATCCCCACCAAGCTCGAGTTAACCTTCAGCTACTTGGAGATTCATGGCGTCGTTTGCAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS TCA 72 bp CTTGTAACTTCTCCAGCCATTGATTCCAGGGTCTCCTaGATTGGACTGGATAGTAAGCCACTGGCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LVTSPAIDSRVS*IGLDSKPLAPA
Trigger: GGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp CACTCTCCCCATGAGACCATTCTGTTCACCATCTTGTaGGACTATGTTGGCAGCACAGACCGCTGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: HSPHETILFTIL*DYVGSTDRCLG
Trigger: ACCCAAGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAGATGGTGAACAGAATGGTCTCATGGGGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp ACAGTCCACAGGTGGACTTCTGACTGCCCCTTTTGGTaGGGAGGGTTCTTCTGTCATCAAGATCGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: TVHRWTSDCPFW*GGFFCHQDRWW
Trigger: CCACCAACGATCTTGATGACAGAAGAACCCTCCTCACCAAAAGGGGCAGTCAGAAGTCCACCTGTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp TGGATGAGCTCCGAGACCTGGAGCCTGCTTCCGCTTTaGGTTCTGCTTTGGTATTCTTTTCTGGTGTTCCCA +
Preference number: 6 (lower is better)
Translates to: WMSSETWSLLPL*VLLWYSFLVFP
Trigger: TGGGAACACCAGAAAAGAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 72 bp CTTCCCAGGGCATTGATGATGATGGTGACCTCAGTCTaGAGTTTCGAGTCAGCCAGGGACAAGGACTGCAGA +
Preference number: 6 (lower is better)
Translates to: LPRALMMMVTSV*SFESARDKDCR
Trigger: TCTGCAGTCCTTGTCCCTGGCTGACTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 72 bp ATGAGACCATTCTGTTCACCATCTTGTGAGACTATGTaGGCAGCACAGACCGCTGCTTGGGTGGGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: MRPFCSPSCETM*AAQTAAWVGCC
Trigger: GCAGCAACCCACCCAAGCAGCGGTCTGTGCTGCCAACATAGTCTCACAAGATGGTGAACAGAATGGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp GTAGGTGTGCTGGATGAGCTCCGAGACCTGGAGCCTGCTTCCGCTTaGGGTTCTGCTTTGGTATTCTTTTCTGGTGTTCCCAAACCAAAG +
Preference number: 6 (lower is better)
Translates to: VGVLDELRDLEPASA*GSALVFFSGVPKPK
Trigger: CTTTGGTTTGGGAACACCAGAAAAGAATACCAAAGCAGAACCCAAAGCGGAAGCAGGCTCCAGGTCTCGGAGCTCATCCAGCACACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp TTTCTATCAACTCCCTGGGAACGTCAGAGCTCTCCTCGGTCATGGTaGCCCTGTAGGTGTGGGGGTTATTGCAGGTCCAACTCTGATTTA +
Preference number: 6 (lower is better)
Translates to: FLSTPWERQSSPRSW*PCRCGGYCRSNSDL
Trigger: TAAATCAGAGTTGGACCTGCAATAACCCCCACACCTACAGGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CAA 90 bp AAGGAGTCAGGTGTTTTTATCTCCTCTATCCGTTCAGAATTGCCATaGTGCTCGGCGGCCTTTGTGTCCTTCCTGGGACAGTCCACAGGT +
Preference number: 6 (lower is better)
Translates to: KESGVFISSIRSELP*CSAAFVSFLGQSTG
Trigger: ACCTGTGGACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACCTGACTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp TCCTGTCTGAGGGATGGGAAGGGCGGGTCTTCGATGTaGATTGGTACCTCTTCCAGCGCTTTATCTAGATCA +
Preference number: 6 (lower is better)
Translates to: SCLRDGKGGSSM*IGTSSSALSRS
Trigger: TGATCTAGATAAAGCGCTGGAAGAGGTACCAATTCACATCGAAGACCCGCCCTTCCCATCCCTCAGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp CACTCACGTCCTCGGGTGACGCCATCTTCATGGAAATaGTGCACTTCTCAGTTTCCACAATCATCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: HSRPRVTPSSWK*CTSQFPQSSEL
Trigger: CAGCTCAGATGATTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS GCA 72 bp CCATATTACAGTCCTGAGCTTAGTGTTGATCTGCAGTaGTTTGGCCAGCATCTTCGCTCCCATGTCCCCCAT +
Preference number: 6 (lower is better)
Translates to: PYYSPELSVDLQ*FGQHLRSHVPH
Trigger: ATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCAACACTAAGCTCAGGACTGTAATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp GTTTTTATCTCCTCTATCCGTTCAGAATTGCCATTGTaGTCGGCGGCCTTTGTGTCCTTCCTGGGACAGTCC +
Preference number: 6 (lower is better)
Translates to: VFISSIRSELPL*SAAFVSFLGQS
Trigger: GGACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp GCACCTCACTCACGTCCTCGGGTGACGCCATCTTCATaGAAATGCTGCACTTCTCAGTTTCCACAATCATCT +
Preference number: 6 (lower is better)
Translates to: APHSRPRVTPSS*KCCTSQFPQSS
Trigger: AGATGATTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS CAA 72 bp TCCACTTTGGTCAGGGAGGTGTTGCTTCCCAGGGCATaGATGATGATGGTGACCTCAGTCTTGAGTTTCGAG +
Preference number: 6 (lower is better)
Translates to: STLVREVLLPRA*MMMVTSVLSFE
Trigger: CTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGGGAAGCAACACCTCCCTGACCAAAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 72 bp GGTGTTTTTATCTCCTCTATCCGTTCAGAATTGCCATaGTGCTCGGCGGCCTTTGTGTCCTTCCTGGGACAG +
Preference number: 6 (lower is better)
Translates to: GVFISSIRSELP*CSAAFVSFLGQ
Trigger: CTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp TCTTCAAAGGAGTCAGGTGTTTTTATCTCCTCTATCCGTTCAGAATaGCCATTGTGCTCGGCGGCCTTTGTGTCCTTCCTGGGACAGTCC +
Preference number: 6 (lower is better)
Translates to: SSKESGVFISSIRSE*PLCSAAFVSFLGQS
Trigger: GGACTGTCCCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACCTGACTCCTTTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp AGGGTAGAGGCGGTCAATGGATTGGCACTGAGTGACTaGGAAAGGCTGTTCACCCCTTTAGGTGATAATGAG +
Preference number: 6 (lower is better)
Translates to: RVEAVNGLALSD*ERLFTPLGDNE
Trigger: CTCATTATCACCTAAAGGGGTGAACAGCCTTTCTCAGTCACTCAGTGCCAATCCATTGACCGCCTCTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS TCA 72 bp TTCTCCTCAGCCAGCTCGATCTCTAAGGATTCTTGTTaGGGAAGGGTCTTGCCACGTCTGCTGAAATGGTCA +
Preference number: 6 (lower is better)
Translates to: FSSASSISKDSC*GRVLPRLLKWS
Trigger: TGACCATTTCAGCAGACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGAGATCGAGCTGGCTGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp TCACGTCCTCGGGTGACGCCATCTTCATGGAAATGCTaGACTTCTCAGTTTCCACAATCATCTGAGCTGACT +
Preference number: 6 (lower is better)
Translates to: SRPRVTPSSWKC*TSQFPQSSELT
Trigger: AGTCAGCTCAGATGATTGTGGAAACTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS GCA 72 bp TTGTCCCATATTACAGTCCTGAGCTTAGTGTTGATCTaGAGTGCTTTGGCCAGCATCTTCGCTCCCATGTCC +
Preference number: 6 (lower is better)
Translates to: LSHITVLSLVLI*SALASIFAPMS
Trigger: GGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCAACACTAAGCTCAGGACTGTAATATGGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp AGTCAGGTGTTTTTATCTCCTCTATCCGTTCAGAATTaGCATTGTGCTCGGCGGCCTTTGTGTCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SQVFLSPLSVQN*HCARRPLCPSW
Trigger: CCAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp CTATCCTCCAGTGGGTTGCCAGCAAGGTTAATTGTGTaGAGTCCTGAGTTGGGATTATGTGCTAGAGCACTG +
Preference number: 6 (lower is better)
Translates to: LSSSGLPARLIV*SPELGLCARAL
Trigger: CAGTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS CAA 72 bp GAGTCAGGTGTTTTTATCTCCTCTATCCGTTCAGAATaGCCATTGTGCTCGGCGGCCTTTGTGTCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: ESGVFISSIRSE*PLCSAAFVSFL
Trigger: CAGGAAGGACACAAAGGCCGCCGAGCACAATGGCAATTCTGAACGGATAGAGGAGATAAAAACACCTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp GCTGCTTGGGTGGGTTGCTGCTTCTTATTCCTTTTTGGCCTTAACTaGGTAAAGTGTTCCAGCTTCTTCCCCTCTTCAGAGGGCAACTCA +
Preference number: 6 (lower is better)
Translates to: AAWVGCCFLFLFGLN*VKCSSFFPSSEGNS
Trigger: TGAGTTGCCCTCTGAAGAGGGGAAGAAGCTGGAACACTTTACCAAGTTAAGGCCAAAAAGGAATAAGAAGCAGCAACCCACCCAAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp AAGACAGTTCTGGAGAGGTTGAGCACAGCTAAATATTaGAGGCATCCACGGAGAAGAGCTCCACAGACCATG +
Preference number: 6 (lower is better)
Translates to: KTVLERLSTAKY*RHPRRRAPQTM
Trigger: CATGGTCTGTGGAGCTCTTCTCCGTGGATGCCTTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS GCA 72 bp ACTATGTTGGCAGCACAGACCGCTGCTTGGGTGGGTTaGTGCTTCTTATTCCTTTTTGGCCTTAACTTGGTA +
Preference number: 6 (lower is better)
Translates to: TMLAAQTAAWVG*CFLFLFGLNLV
Trigger: TACCAAGTTAAGGCCAAAAAGGAATAAGAAGCAGCAACCCACCCAAGCAGCGGTCTGTGCTGCCAACATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp TCACGCATGAGCCGCTCTGCTGATTTTAAATCTTCCTaGATAGCGTCTCCCCCACAATTTCGTAAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SRMSRSADFKSS*IASPPQFRKEL
Trigger: CAACTCCTTACGAAATTGTGGGGGAGACGCTATCCAGGAAGATTTAAAATCAGCAGAGCGGCTCATGCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp ATCCAGCTAGTATACTTTTTCCCTGGCCGATTCAGTTaGCTAGAGCTCTTCAGGGACCACACTGCAATTCTG +
Preference number: 6 (lower is better)
Translates to: IQLVYFFPGRFS*LELFRDHTAIL
Trigger: CAGAATTGCAGTGTGGTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACTAGCTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS CAA 72 bp GGGTTGCCAGCAAGGTTAATTGTGTGGAGTCCTGAGTaGGGATTATGTGCTAGAGCACTGGCCAGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: GLPARLIVWSPE*GLCARALASFC
Trigger: ACAAAAACTGGCCAGTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS CAA 72 bp AATGAGAACTCTGCAGTACCTCTATCCTCCAGTGGGTaGCCAGCAAGGTTAATTGTGTGGAGTCCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: NENSAVPLSSSG*PARLIVWSPEL
Trigger: CAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTACTGCAGAGTTCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS CAA 90 bp TCCTCCAGTGGGTTGCCAGCAAGGTTAATTGTGTGGAGTCCTGAGTaGGGATTATGTGCTAGAGCACTGGCCAGTTTTTGTGCAAAATCT +
Preference number: 6 (lower is better)
Translates to: SSSGLPARLIVWSPE*GLCARALASFCAKS
Trigger: AGATTTTGCACAAAAACTGGCCAGTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS CAA 90 bp GAGGAGGTATATCCAGCTAGTATACTTTTTCCCTGGCCGATTCAGTaGGCTAGAGCTCTTCAGGGACCACACTGCAATTCTGGATTTCCT +
Preference number: 6 (lower is better)
Translates to: EEVYPASILFPWPIQ*ARALQGPHCNSGFP
Trigger: AGGAAATCCAGAATTGCAGTGTGGTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACTAGCTGGATATACCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS CAA 90 bp GCCCTAGAAACAGGCCGCAGCATTCGGCTATGGATACTCTTCCTTTaGGATTTAGGGGTCATACTTGTACAGCAGAGAGTCATACAGGTA +
Preference number: 6 (lower is better)
Translates to: ALETGRSIRLWILFL*DLGVILVQQRVIQV
Trigger: TACCTGTATGACTCTCTGCTGTACAAGTATGACCCCTAAATCCAAAAGGAAGAGTATCCATAGCCGAATGCTGCGGCCTGTTTCTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS CAA 90 bp GAGGAGGGTTCTTCTGTCATCAAGATCGTTGGTGGTCGCTCGGATTaGGACCGGGATTTGATTAAATTGAGAAAGCCACTACTTTTCCGA +
Preference number: 6 (lower is better)
Translates to: EEGSSVIKIVGGRSD*DRDLIKLRKPLLFR
Trigger: TCGGAAAAGTAGTGGCTTTCTCAATTTAATCAAATCCCGGTCCAAATCCGAGCGACCACCAACGATCTTGATGACAGAAGAACCCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp TTCCTTTCCGGTGAGAGAAGACAGTTCTGGAGAGGTTaGGCACAGCTAAATATTGAAGGCATCCACGGAGAA +
Preference number: 6 (lower is better)
Translates to: FLSGERRQFWRG*AQLNIEGIHGE
Trigger: TTCTCCGTGGATGCCTTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTGTCTTCTCTCACCGGAAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS TCA 72 bp AGGATTCTTGTTGAGGAAGGGTCTTGCCACGTCTGCTaGAATGGTCAGCCAGTTTATGATGGCAATGTGAGA +
Preference number: 6 (lower is better)
Translates to: RILVEEGSCHVC*NGQPVYDGNVR
Trigger: TCTCACATTGCCATCATAAACTGGCTGACCATTTCAGCAGACGTGGCAAGACCCTTCCTCAACAAGAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CCA 72 bp GTCCAGCATTTTCCAACACCAATTCTTCCAGTCGATTaGACCTACTCACCACCCTCAAGATCTGTTCACAGA +
Preference number: 6 (lower is better)
Translates to: VQHFPTPILPVD*TYSPPSRSVHR
Trigger: TCTGTGAACAGATCTTGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATTGGTGTTGGAAAATGCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS CCA 72 bp GAGCTCCACAGACCATGTCCAGGGAACATTCTGTATTaGATAAATCCAGATGAACAATGGCATTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ELHRPCPGNILY*INPDEQWHLAG
Trigger: CCCAGCCAAATGCCATTGTTCATCTGGATTTATCCAATACAGAATGTTCCCTGGACATGGTCTGTGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CCA 72 bp AAAGAGGAGGTATATCCAGCTAGTATACTTTTTCCCTaGCCGATTCAGTTGGCTAGAGCTCTTCAGGGACCA +
Preference number: 6 (lower is better)
Translates to: KEEVYPASILFP*PIQLARALQGP
Trigger: TGGTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACTAGCTGGATATACCTCCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS CAA 72 bp AGTCCAGCATTTTCCAACACCAATTCTTCCAGTCGATaGGACCTACTCACCACCCTCAAGATCTGTTCACAG +
Preference number: 6 (lower is better)
Translates to: SPAFSNTNSSSR*DLLTTLKICSQ
Trigger: CTGTGAACAGATCTTGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATTGGTGTTGGAAAATGCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS CAA 72 bp ATACTTAAAGAGGACACACCTCTATCCTCCAGTGGGTaGCCAGCAAGGTTAATTGTGTGGAGTCCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: ILKEDTPLSSSG*PARLIVWSPEL
Trigger: CAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTGTGTCCTCTTTAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CAA 72 bp ACAGGCCGCAGCATTCGGCTATGGATACTCTTCCTTTaGGATTTAGGGGTCATCATACAGGTATCCAGATCT +
Preference number: 6 (lower is better)
Translates to: TGRSIRLWILFL*DLGVIIQVSRS
Trigger: AGATCTGGATACCTGTATGATGACCCCTAAATCCAAAAGGAAGAGTATCCATAGCCGAATGCTGCGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS CAA 72 bp TATCCAGCTAGTATACTTTTTCCCTGGCCGATTCAGTaGGCTAGAGCTCTTCAGGGACCACACTGCAATTCT +
Preference number: 6 (lower is better)
Translates to: YPASILFPWPIQ*ARALQGPHCNS
Trigger: AGAATTGCAGTGTGGTCCCTGAAGAGCTCTAGCCAACTGAATCGGCCAGGGAAAAAGTATACTAGCTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461945.1
CDS CAA 90 bp TCTGTTCTAAGTCCAGCATTTTCCAACACCAATTCTTCCAGTCGATaGGACCTACTCACCACCCTCAAGATCTGTTCACAGACATCAGTG +
Preference number: 6 (lower is better)
Translates to: SVLSPAFSNTNSSSR*DLLTTLKICSQTSV
Trigger: CACTGATGTCTGTGAACAGATCTTGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATTGGTGTTGGAAAATGCTGGACTTAGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS CAA 90 bp TCTGTCATCAAGATCGTTGGTGGTCGCTCGGATTTGGACCGGGATTaGATTAAATTGAGAAAGCCACTACTTTTCCGAGAATCTCGCTTT +
Preference number: 6 (lower is better)
Translates to: SVIKIVGGRSDLDRD*IKLRKPLLFRESRF
Trigger: AAAGCGAGATTCTCGGAAAAGTAGTGGCTTTCTCAATTTAATCAAATCCCGGTCCAAATCCGAGCGACCACCAACGATCTTGATGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 90 bp ATCAATGATAATGAGAACTCTGCAGTACCTCTATCCTCCAGTGGGTaGCCAGCAAGGTTAATTGTGTGGAGTCCTGAGTTGGGATTATGT +
Preference number: 6 (lower is better)
Translates to: INDNENSAVPLSSSG*PARLIVWSPELGLC
Trigger: ACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTACTGCAGAGTTCTCATTATCATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS CCA 72 bp AAGCCACTGGCTCCCGCCCAAGATGCACCACCAACATaGTATAAATTTGGTAACAACGTTTTAGAGTTCTTA +
Preference number: 6 (lower is better)
Translates to: KPLAPAQDAPPT*YKFGNNVLEFL
Trigger: TAAGAACTCTAAAACGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS CAA 72 bp TCTTCTGTCATCAAGATCGTTGGTGGTCGCTCGGATTaGGACCGGGATTTGATTAAATTGAGAAAGCCACTA +
Preference number: 6 (lower is better)
Translates to: SSVIKIVGGRSD*DRDLIKLRKPL
Trigger: TAGTGGCTTTCTCAATTTAATCAAATCCCGGTCCAAATCCGAGCGACCACCAACGATCTTGATGACAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp ATGTTGTGTATTTCAGCAATGCAACCTTCTAATACTTaGGCACCTCCTGATCTCAGCTCACAGTTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: MLCISAMQPSNT*APPDLSSQLLR
Trigger: TCTCAGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCATTGCTGAAATACACAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329474.7
CDS TCA 72 bp ATGTTGTGTATTTCAGCAATGCAACCTTCTAATACTTaGGCACCTCCTGATCTCAGACAATGGCCAAGCTCA +
Preference number: 6 (lower is better)
Translates to: MLCISAMQPSNT*APPDLRQWPSS
Trigger: TGAGCTTGGCCATTGTCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCATTGCTGAAATACACAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635618.1
CDS GCA 72 bp CTTTTCCATAGCAACAGCTATATCCTGAAAGCCTTGTaGAGTGATGTTGTTCTTGTCCCATATTACAGTCCT +
Preference number: 6 (lower is better)
Translates to: LFHSNSYILKAL*SDVVLVPYYSP
Trigger: AGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS GCA 72 bp AGAGGTTGGTATCAGAATTTGCTTGAAAAACCTCCTTaGTCTGAGAGAAATCCTACCTCTAAGTCCATACCA +
Preference number: 6 (lower is better)
Translates to: RGWYQNLLEKPP*SERNPTSKSIP
Trigger: TGGTATGGACTTAGAGGTAGGATTTCTCTCAGAGCAAGGAGGTTTTTCAAGCAAATTCTGATACCAACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS CAA 90 bp TCTGTTTCCTACTTCCAAAGGAAAGAGGTTGGTATCAGAATTTGCTaGAAAAACCTCCTTGCTCTGAGAGAAATCCTACCTCTAAGTCCA +
Preference number: 6 (lower is better)
Translates to: SVSYFQRKEVGIRIC*KNLLALREILPLSP
Trigger: TGGACTTAGAGGTAGGATTTCTCTCAGAGCAAGGAGGTTTTTCAAGCAAATTCTGATACCAACCTCTTTCCTTTGGAAGTAGGAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS TCA 72 bp AATTGTATCCACATCCCATTGTACTTCTTCCCTGTATaGAAATCCAAGCCAGTCACAAACACAGGCATACAT +
Preference number: 6 (lower is better)
Translates to: NCIHIPLYFFPV*KSKPVTNTGIH
Trigger: ATGTATGCCTGTGTTTGTGACTGGCTTGGATTTTCATACAGGGAAGAAGTACAATGGGATGTGGATACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000461945.1
CDS GCA 72 bp TCCTACTTCCAAAGGAAAGAGGTTGGTATCAGAATTTaGTTGAAAAACCTCCTTGCTCTGAGAGAAATCCTA +
Preference number: 6 (lower is better)
Translates to: SYFQRKEVGIRI*LKNLLALREIL
Trigger: TAGGATTTCTCTCAGAGCAAGGAGGTTTTTCAAGCAAATTCTGATACCAACCTCTTTCCTTTGGAAGTAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497227.1
CDS CAA 72 bp GTTCTTTTCCATAGCAACAGCTATATCCTGAAAGCCTaGTGCAGTGATGTTGTTCTTGTCCCATATTACAGT +
Preference number: 6 (lower is better)
Translates to: VLFHSNSYILKA*CSDVVLVPYYS
Trigger: ACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1
CDS TCA 72 bp AGTTTTAGATCCTTAGAGGACAGTTTTGTGAACCACTaGTTATATTCCAGAGCAGCAATGATAGGTATTAGG +
Preference number: 6 (lower is better)
Translates to: SFRSLEDSFVNH*LYSRAAMIGIR
Trigger: CCTAATACCTATCATTGCTGCTCTGGAATATAATCAGTGGTTCACAAAACTGTCCTCTAAGGATCTAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000497227.1
CDS TCA 72 bp CAGATTCTAAACCATTGTCAGAGATGTCTAAGCTGGTaGTGTTGTGTATTTCAGCAATGCAACCTTCTAATA +
Preference number: 6 (lower is better)
Translates to: QILNHCQRCLSW*CCVFQQCNLLI
Trigger: TATTAGAAGGTTGCATTGCTGAAATACACAACATCACCAGCTTAGACATCTCTGACAATGGTTTAGAATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329474.7
ENST00000635618.1