Pregenerated sensors for CARMAL (Homo sapiens)
Ensembl gene IDs: ENSG00000260123Ensembl transcript IDs: ENST00000565938.1, ENST00000668304.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAGCAAGCACATGGGTCACAGGACTAAAGGAGAAAGGGGACGTGTaGGTGGAGCATGAGCTTGCGATGCCTGCTCCTGTGGTTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RASTWVTGLKEKGDV*VEHELAMPAPVVFS Trigger: AGAGAAAACCACAGGAGCAGGCATCGCAAGCTCATGCTCCACCCACACGTCCCCTTTCTCCTTTAGTCCTGTGACCCATGTGCTTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS TCA 90 bp | TTTTTGAAGGTCTATGGGCTGAATTTGGTAGGGCAGCATTGGCGGTaGGGGAGCATGGCATTCCAGGTAGGCCCTTTGAGACTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: FLKVYGLNLVGQHWR*GSMAFQVGPLRLCC Trigger: GCAGCAGAGTCTCAAAGGGCCTACCTGGAATGCCATGCTCCCTCACCGCCAATGCTGCCCTACCAAATTCAGCCCATAGACCTTCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS TCA 90 bp | TCTTCCTCTACTCCTCCACTGGAACAGTTCTGGCAAAGGCCACTGTaGCCCCCACTCACTGCTGCATCCAGCAGTTGGCTTTCAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SSSTPPLEQFWQRPL*PPLTAASSSWLSVL Trigger: AAGAACTGAAAGCCAACTGCTGGATGCAGCAGTGAGTGGGGGTCACAGTGGCCTTTGCCAGAACTGTTCCAGTGGAGGAGTAGAGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS GCA 90 bp | TCCACTGGAACAGTTCTGGCAAAGGCCACTGTGACCCCCACTCACTaGTGCATCCAGCAGTTGGCTTTCAGTTCTTCTTTACTTGACATC | + |
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Preference number: 5 (lower is better) Translates to: STGTVLAKATVTPTH*CIQQLAFSSSLLDI Trigger: GATGTCAAGTAAAGAAGAACTGAAAGCCAACTGCTGGATGCAGCAGTGAGTGGGGGTCACAGTGGCCTTTGCCAGAACTGTTCCAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS CCA 90 bp | GAGTTACAGCCAATCCACAACATATTTGCTCATGATTCTGCAACGTaGGCAGAGCTCGGCAGCGGCAGTTCATCTCTGTTCCACATGGCA | + |
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Preference number: 5 (lower is better) Translates to: ELQPIHNIFAHDSAT*AELGSGSSSLFHMA Trigger: TGCCATGTGGAACAGAGATGAACTGCCGCTGCCGAGCTCTGCCCACGTTGCAGAATCATGAGCAAATATGTTGTGGATTGGCTGTAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS GCA 90 bp | CTCTTTTTCTTCTGCCTGGAGACTAGTAATGTTCCAGATAGAGCCTaGTCCTTCAGCCTGGATCCCAGAGCAGAGTTACAGCCAATCCAC | + |
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Preference number: 5 (lower is better) Translates to: LFFFCLETSNVPDRA*SFSLDPRAELQPIH Trigger: GTGGATTGGCTGTAACTCTGCTCTGGGATCCAGGCTGAAGGAGCAGGCTCTATCTGGAACATTACTAGTCTCCAGGCAGAAGAAAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565938.1 ENST00000668304.1 |
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| CDS GCA 90 bp | ACTGGAACAGTTCTGGCAAAGGCCACTGTGACCCCCACTCACTGCTaGATCCAGCAGTTGGCTTTCAGTTCTTCTTTACTTGACATCTTG | + |
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Preference number: 5 (lower is better) Translates to: TGTVLAKATVTPTHC*IQQLAFSSSLLDIL Trigger: CAAGATGTCAAGTAAAGAAGAACTGAAAGCCAACTGCTGGATGCAGCAGTGAGTGGGGGTCACAGTGGCCTTTGCCAGAACTGTTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS CCA 90 bp | TTCATCCATTCAATCATCCATTCCATTGTCTCTTTTTCTTCTGCCTaGAGACTAGTAATGTTCCAGATAGAGCCTGCTCCTTCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FIHSIIHSIVSFSSA*RLVMFQIEPAPSAW Trigger: CCAGGCTGAAGGAGCAGGCTCTATCTGGAACATTACTAGTCTCCAGGCAGAAGAAAAAGAGACAATGGAATGGATGATTGAATGGATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565938.1 ENST00000668304.1 |
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| CDS CCA 90 bp | GTGTCAGCAATAATTATTCAGAGGAGGCAGCAATTTCTTCTGACTTaGATTCTTGGAGATTTGAATTGGTTTTTGAAGGTCTATGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VSAIIIQRRQQFLLT*ILGDLNWFLKVYGL Trigger: CAGCCCATAGACCTTCAAAAACCAATTCAAATCTCCAAGAATCCAAGTCAGAAGAAATTGCTGCCTCCTCTGAATAATTATTGCTGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS CAA 72 bp | GTGGTAGAGACTGGGAAAGGGCCTGAGAGGGGGTTCTaGGGTGCCAGTGATGCCCTGTTCCTGAGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VVETGKGPERGF*GASDALFLSWV Trigger: CACCCAGCTCAGGAACAGGGCATCACTGGCACCCAAGAACCCCCTCTCAGGCCCTTTCCCAGTCTCTACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS TCA 72 bp | ACTCCTCCACTGGAACAGTTCTGGCAAAGGCCACTGTaGCCCCCACTCACTGCTGCATCCAGCAGTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TPPLEQFWQRPL*PPLTAASSSWL Trigger: AAGCCAACTGCTGGATGCAGCAGTGAGTGGGGGTCACAGTGGCCTTTGCCAGAACTGTTCCAGTGGAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS CCA 72 bp | ACATGGGTCACAGGACTAAAGGAGAAAGGGGACGTGTaGGTGGAGCATGAGCTTGCGATGCCTGCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TWVTGLKEKGDV*VEHELAMPAPV Trigger: CACAGGAGCAGGCATCGCAAGCTCATGCTCCACCCACACGTCCCCTTTCTCCTTTAGTCCTGTGACCCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS TCA 72 bp | GTCTATGGGCTGAATTTGGTAGGGCAGCATTGGCGGTaGGGGAGCATGGCATTCCAGGTAGGCCCTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VYGLNLVGQHWR*GSMAFQVGPLR Trigger: TCTCAAAGGGCCTACCTGGAATGCCATGCTCCCTCACCGCCAATGCTGCCCTACCAAATTCAGCCCATAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS CAA 72 bp | TTTGAAGGTCTATGGGCTGAATTTGGTAGGGCAGCATaGGCGGTGAGGGAGCATGGCATTCCAGGTAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FEGLWAEFGRAA*AVREHGIPGRP Trigger: GGGCCTACCTGGAATGCCATGCTCCCTCACCGCCAATGCTGCCCTACCAAATTCAGCCCATAGACCTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS GCA 72 bp | GGGAGCATGGCATTCCAGGTAGGCCCTTTGAGACTCTaGTGCAAGCTCACTCCATCCATAAAGGCTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GSMAFQVGPLRL*CKLTPSIKAFL Trigger: GAGGAAAGCCTTTATGGATGGAGTGAGCTTGCAGCAGAGTCTCAAAGGGCCTACCTGGAATGCCATGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS TCA 72 bp | AGCAGAGTTACAGCCAATCCACAACATATTTGCTCATaGTTCTGCAACGTGGGCAGAGCTCGGCAGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRVTANPQHICS*FCNVGRARQRQ Trigger: CTGCCGCTGCCGAGCTCTGCCCACGTTGCAGAATCATGAGCAAATATGTTGTGGATTGGCTGTAACTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS CAA 90 bp | GAATTGGTTTTTGAAGGTCTATGGGCTGAATTTGGTAGGGCAGCATaGGCGGTGAGGGAGCATGGCATTCCAGGTAGGCCCTTTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: ELVFEGLWAEFGRAA*AVREHGIPGRPFET Trigger: AGTCTCAAAGGGCCTACCTGGAATGCCATGCTCCCTCACCGCCAATGCTGCCCTACCAAATTCAGCCCATAGACCTTCAAAAACCAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS GCA 72 bp | TTCTGCCTGGAGACTAGTAATGTTCCAGATAGAGCCTaGTCCTTCAGCCTGGATCCCAGAGCAGAGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: FCLETSNVPDRA*SFSLDPRAELQ Trigger: CTGTAACTCTGCTCTGGGATCCAGGCTGAAGGAGCAGGCTCTATCTGGAACATTACTAGTCTCCAGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565938.1 ENST00000668304.1 |
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| CDS GCA 72 bp | AGCATGGCATTCCAGGTAGGCCCTTTGAGACTCTGCTaGAAGCTCACTCCATCCATAAAGGCTTTCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: SMAFQVGPLRLC*KLTPSIKAFLI Trigger: GATGAGGAAAGCCTTTATGGATGGAGTGAGCTTGCAGCAGAGTCTCAAAGGGCCTACCTGGAATGCCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS GCA 72 bp | GTTCTGGCAAAGGCCACTGTGACCCCCACTCACTGCTaGATCCAGCAGTTGGCTTTCAGTTCTTCTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: VLAKATVTPTHC*IQQLAFSSSLL Trigger: AAGTAAAGAAGAACTGAAAGCCAACTGCTGGATGCAGCAGTGAGTGGGGGTCACAGTGGCCTTTGCCAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS CCA 72 bp | GATTCTTGGAGATTTGAATTGGTTTTTGAAGGTCTATaGGCTGAATTTGGTAGGGCAGCATTGGCGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DSWRFELVFEGL*AEFGRAALAVR Trigger: CCTCACCGCCAATGCTGCCCTACCAAATTCAGCCCATAGACCTTCAAAAACCAATTCAAATCTCCAAGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS CAA 90 bp | GAGGAGGCAGCAATTTCTTCTGACTTGGATTCTTGGAGATTTGAATaGGTTTTTGAAGGTCTATGGGCTGAATTTGGTAGGGCAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: EEAAISSDLDSWRFE*VFEGLWAEFGRAAL Trigger: CAATGCTGCCCTACCAAATTCAGCCCATAGACCTTCAAAAACCAATTCAAATCTCCAAGAATCCAAGTCAGAAGAAATTGCTGCCTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS TCA 72 bp | GTTGAGATGAAAGATTGGCCATGGATTGATCATTGCTaGAGGTGGATGATATCTACCTGGACTTCACTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VEMKDWPWIDHC*RWMISTWTSLY Trigger: GTACAGTGAAGTCCAGGTAGATATCATCCACCTTCAGCAATGATCAATCCATGGCCAATCTTTCATCTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668304.1 |
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| CDS CCA 72 bp | TCAATCATCCATTCCATTGTCTCTTTTTCTTCTGCCTaGAGACTAGTAATGTTCCAGATAGAGCCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SIIHSIVSFSSA*RLVMFQIEPAP Trigger: AGGAGCAGGCTCTATCTGGAACATTACTAGTCTCCAGGCAGAAGAAAAAGAGACAATGGAATGGATGATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565938.1 ENST00000668304.1 |
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| CDS CAA 90 bp | ATTCAGAGGAGGCAGCAATTTCTTCTGACTTGGATTCTTGGAGATTaGAATTGGTTTTTGAAGGTCTATGGGCTGAATTTGGTAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: IQRRQQFLLTWILGD*NWFLKVYGLNLVGQ Trigger: CTGCCCTACCAAATTCAGCCCATAGACCTTCAAAAACCAATTCAAATCTCCAAGAATCCAAGTCAGAAGAAATTGCTGCCTCCTCTGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS CAA 72 bp | AGGCAGCAATTTCTTCTGACTTGGATTCTTGGAGATTaGAATTGGTTTTTGAAGGTCTATGGGCTGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: RQQFLLTWILGD*NWFLKVYGLNL Trigger: CAAATTCAGCCCATAGACCTTCAAAAACCAATTCAAATCTCCAAGAATCCAAGTCAGAAGAAATTGCTGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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| CDS CCA 72 bp | ATAATTATTCAGAGGAGGCAGCAATTTCTTCTGACTTaGATTCTTGGAGATTTGAATTGGTTTTTGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: IIIQRRQQFLLT*ILGDLNWFLKV Trigger: GACCTTCAAAAACCAATTCAAATCTCCAAGAATCCAAGTCAGAAGAAATTGCTGCCTCCTCTGAATAATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565938.1 |
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