RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARHSP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153048

Ensembl transcript IDs: ENST00000311052.10, ENST00000396593.6, ENST00000561530.5, ENST00000562586.1, ENST00000562843.5, ENST00000563815.5, ENST00000565287.5, ENST00000567554.5, ENST00000567626.1, ENST00000567908.5, ENST00000568117.5, ENST00000568968.1, ENST00000569398.5, ENST00000569572.1, ENST00000570125.5, ENST00000610831.4, ENST00000611932.4, ENST00000614449.4, ENST00000618335.4, ENST00000619881.4

Found 822 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGAGAGGCTTGGGGCAGTGAAAGCCCTCTCGGGTCTTGGCTGTaGAAGTGTGGACTGTACCAGCAGATGGGCCCTTGGGAAGCCAAC +
Preference number: 1 (lower is better)
Translates to: RREAWGSESPLGSWL*KCGLYQQMGPWEAN
Trigger: GTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTCCACACTTCCACAGCCAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGG +
Preference number: 1 (lower is better)
Translates to: RLKPRLVWKNVISSV*CLLPAKSPTSTGQG
Trigger: CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 90 bp AACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTGTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: NCFAQAPGEAQGALR*KFALEKSRKVPVRL
Trigger: CAGCCTGACAGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTG +
Preference number: 1 (lower is better)
Translates to: LKPRLVWKNVISSVC*LLPAKSPTSTGQGV
Trigger: CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 90 bp GCCCTCTCGGGTCTTGGCTGTGGAAGTGTGGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACAGGGAACAATTCAAGGCTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: ALSGLGCGSVDCTSR*ALGKPTGNNSRLER
Trigger: TCTCTCCAGCCTTGAATTGTTCCCTGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTCCACACTTCCACAGCCAAGACCCGAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATC +
Preference number: 1 (lower is better)
Translates to: SRVEECHLQCLLPPP*KVSHKHRTRGASTI
Trigger: GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 90 bp GCAGCTGGAGAAATACCACCCTTGATCCACTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACCAGTGGGCACCTCTCCTTTTTAAAT +
Preference number: 1 (lower is better)
Translates to: AAGEIPPLIHSLGWG*NLHSATSGHLSFLN
Trigger: ATTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp TCGCAGGCGAGGAAACAATGGCCAGGACCTAACTGTGGTGGGAACTaGCTTTGTCTCCACACACTCGCAATCAACATGCGTATTTGCTAT +
Preference number: 1 (lower is better)
Translates to: SQARKQWPGPNCGGN*LCLHTLAINMRICY
Trigger: ATAGCAAATACGCATGTTGATTGCGAGTGTGTGGAGACAAAGGCAGTTCCCACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR TCA 90 bp AGGAGTTTCCCCTTGTGTAAACCGGTATCGCGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAATACCCATTGATTGAAAGAGCTGTG +
Preference number: 1 (lower is better)
Translates to: RSFPLCKPVSRPFQL*HPAVLEYPLIERAV
Trigger: CACAGCTCTTTCAATCAATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACGCGATACCGGTTTACACAAGGGGAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp GGGAACTGCCTTTGTCTCCACACACTCGCAATCAACATGCGTATTTaGTATTCTCAAACAACTCCCTTCCACCCCCTTAGGCTGAAAGGA +
Preference number: 1 (lower is better)
Translates to: GNCLCLHTLAINMRI*YSQTTPFHPLRLKG
Trigger: TCCTTTCAGCCTAAGGGGGTGGAAGGGAGTTGTTTGAGAATAGCAAATACGCATGTTGATTGCGAGTGTGTGGAGACAAAGGCAGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp TCAGTCTCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAAT +
Preference number: 1 (lower is better)
Translates to: SVSHPAKKFAMSAAK*KQSRLWVKALVMKN
Trigger: ATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGAGACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 90 bp AGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGC +
Preference number: 1 (lower is better)
Translates to: RSTYLMKLFMLPASN*TFTVCPKASFQKVC
Trigger: GCAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR TCA 90 bp TGCGTATTTGCTATTCTCAAACAACTCCCTTCCACCCCCTTAGGCTaGAAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAA +
Preference number: 1 (lower is better)
Translates to: CVFAILKQLPSTPLG*KDKLIRVEEYLPDE
Trigger: TTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTTTCAGCCTAAGGGGGTGGAAGGGAGTTGTTTGAGAATAGCAAATACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp GTATGTTTCTCCTTCAACTTTCTTGACTTTGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTCTGGATGGATCGGGACAAAGTTTTT +
Preference number: 1 (lower is better)
Translates to: VCFSFNFLDFARLSG*KLPTLFWMDRDKVF
Trigger: AAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAGAAACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 90 bp AACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGATTCTTGACTACATATAGGTCATAT +
Preference number: 1 (lower is better)
Translates to: NWTFTVCPKASFQKV*LPLFSGFLTTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 90 bp AACAAAAATTTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTaGATTCAGGAATCCTCAATTTTAGCTCTCGCTCTGTCACCAAAA +
Preference number: 1 (lower is better)
Translates to: NKNLLGERWLMGGKI*IQESSILALALSPK
Trigger: TTTTGGTGACAGAGCGAGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAAATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CAA 90 bp TTGCCCAGGCCCCAGGAGAGGCGCAAGGGGCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCAAGGTCCCTGTCAGGCTGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: LPRPQERRKGHLGGN*PWRSHARSLSGCQG
Trigger: CCCCTGGCAGCCTGACAGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGCCTCTCCTGGGGCCTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: AMVIGCADGREHPTPHTCPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACCAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: QHFERPRWADHLRSGVQDQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAACCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: QPSQELENCFAQAPGEAQPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: QHFERPRWADHLRSGVQDLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: AQGALRWKFALEKSRKVPEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CAA 90 bp AGCAGCTGGAGAAATACCACCCTTGATCCACTCCCTGGGATGGGGTaGGAACCTCCACTCAGCCACCAGTGGGCACCTCTCCTTTTTAAA +
Preference number: 2 (lower is better)
Translates to: SSWRNTTLDPLPGMG*EPPLSHQWAPLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCCAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTCTCCCAGTACCAGCCTaGTGTGCCCAGGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHALPVPA*CAQGWE
Trigger: CTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAG...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 2 (lower is better)
Translates to: LIRVEEYLPDEAVHASSISLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 2 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: LLGERWLMGGKIWIQESSPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 2 (lower is better)
Translates to: KMADGRQDLDSGILNFSSGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KMADGRQDLDSGILNFSSAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: LLGERWLMGGKIWIQESSQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAACAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: LLGERWLMGGKIWIQESSRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGCCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: KMADGRQDLDSGILNFSSRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: LLGERWLMGGKIWIQESSISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCCCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 2 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 2 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 2 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LLGERWLMGGKIWIQESSARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCATTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: LLGERWLMGGKIWIQESSFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: KMADGRQDLDSGILNFSSLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHALLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: KMADGRQDLDSGILNFSSKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: KMADGRQDLDSGILNFSSGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGCTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 2 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 2 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKEMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR GCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 2 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR TCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 2 (lower is better)
Translates to: LIRVEEYLPDEAVHASSISTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CCA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAACTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 2 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp CACAACCCCAACCCAACACACACACAGGAGCACAGCTaGAGCACCAGCCACAGGCAGAGTCACACAGGCCCA +
Preference number: 3 (lower is better)
Translates to: HNPNPTHTQEHS*STSHRQSHTGP
Trigger: TGGGCCTGTGTGACTCTGCCTGTGGCTGGTGCTCCAGCTGTGCTCCTGTGTGTGTGTTGGGTTGGGGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562843.5
3UTR TCA 72 bp ATGGTGAGAGGTTGTTGCAATGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCACACCCCACACCTGCCC +
Preference number: 3 (lower is better)
Translates to: MVRGCCNGHRLC*WPGTPHTPHLP
Trigger: GGGCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTCTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp GAGAGGCGCAAGGGGCACTTAGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCCCTGTCAGGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: ERRKGHLGGNLP*RSHARSLSGCQ
Trigger: CTGGCAGCCTGACAGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR TCA 72 bp GCCCATGTGTCTGAGCAGCTGGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGGGTTGGAACCTCCACT +
Preference number: 3 (lower is better)
Translates to: AHVSEQLEKYHP*STPWDGVGTST
Trigger: AGTGGAGGTTCCAACCCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 72 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGA +
Preference number: 3 (lower is better)
Translates to: RLVWKNVISSVC*LLPAKSPTSTG
Trigger: TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp CTGTGGAAGTGTGGACTGTACCAGCAGATGGGCCCTTaGGAAGCCAACAGGGAACAATTCAAGGCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: LWKCGLYQQMGP*EANREQFKAGE
Trigger: CTCTCCAGCCTTGAATTGTTCCCTGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTCCACACTTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp GGTCTTGGCTGTGGAAGTGTGGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACAGGGAACAATTCAAGG +
Preference number: 3 (lower is better)
Translates to: GLGCGSVDCTSR*ALGKPTGNNSR
Trigger: CCTTGAATTGTTCCCTGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTCCACACTTCCACAGCCAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR TCA 72 bp GAGGAAGAGGGATTCTGTGGGTTGAGCCCATGTGTCTaGGCAGCTGGAGAAATACCACCCTTGATCCACTCC +
Preference number: 3 (lower is better)
Translates to: EEEGFCGLSPCV*AAGEIPPLIHS
Trigger: GGAGTGGATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACATGGGCTCAACCCACAGAATCCCTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp GAGGATGTACAAGGAGCATCGCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGTGGGAACTGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: EDVQGASQARKQ*PGPNCGGNCLC
Trigger: ACAAAGGCAGTTCCCACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTGCGATGCTCCTTGTACATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAATCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 3 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 3 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 72 bp AGGAAACAATGGCCAGGACCTAACTGTGGTGGGAACTaGCTTTGTCTCCACACACTCGCAATCAACATGCGT +
Preference number: 3 (lower is better)
Translates to: RKQWPGPNCGGN*LCLHTLAINMR
Trigger: ACGCATGTTGATTGCGAGTGTGTGGAGACAAAGGCAGTTCCCACCACAGTTAGGTCCTGGCCATTGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 3 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 3 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 72 bp CACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTT +
Preference number: 3 (lower is better)
Translates to: HPAKKFAMSAAK*KQSRLWVKALV
Trigger: AACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR TCA 72 bp CGCCATAATTACAGGGGCTGTGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAGGCAGATGAAAAGGTC +
Preference number: 3 (lower is better)
Translates to: RHNYRGCEMAVE*WSHNQKADEKV
Trigger: GACCTTTTCATCTGCCTTCTGGTTGTGTGACCATCACTCAACAGCCATTTCACAGCCCCTGTAATTATGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: LLGERWLMGGKIWIQESSRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 3 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCTTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 3 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 72 bp GGAACTGCCTTTGTCTCCACACACTCGCAATCAACATaGGTATTTGCTATTCTCAAACAACTCCCTTCCACC +
Preference number: 3 (lower is better)
Translates to: GTAFVSTHSQST*VFAILKQLPST
Trigger: GGTGGAAGGGAGTTGTTTGAGAATAGCAAATACGCATGTTGATTGCGAGTGTGTGGAGACAAAGGCAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR-3UTR CAA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR GCA 72 bp TTCATGCTTCCAGCATCAAACTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAAAAGGTTTGCTTGCCT +
Preference number: 3 (lower is better)
Translates to: FMLPASNWTFTV*PKASFQKVCLP
Trigger: AGGCAAGCAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp GCCAGGCTGTCAGGATGCAAGCTACCTACTCTTTTCTaGATGGATCGGGACAAAGTTTTTAAACAAAGACTG +
Preference number: 3 (lower is better)
Translates to: ARLSGCKLPTLF*MDRDKVFKQRL
Trigger: CAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp TACCTGATGAAGCTGTTCATGCTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: YLMKLFMLPASN*TFTVCPKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGCATGAACAGCTTCATCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTaGATTCAGGAATCCTCAATTTTAGCTCTCGCTCTG +
Preference number: 3 (lower is better)
Translates to: LLGERWLMGGKI*IQESSILALAL
Trigger: CAGAGCGAGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CCA 72 bp GGCTGTCAGGATGCAAGCTACCTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTAAACAAAGACTGTGTC +
Preference number: 3 (lower is better)
Translates to: GCQDASYLLFSG*IGTKFLNKDCV
Trigger: GACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAGGTAGCTTGCATCCTGACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCCCGCAGAGGGGATGGTaGGCGCTCACGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCPQRGW*ALTAPR
Trigger: CCTCGGAGCCGTGAGCGCTCACCATCCCCTCTGCGG...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGCCGCAGAGGGGATGGTaGGCGCTCACGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGPQRGW*ALTAPR
Trigger: CCTCGGAGCCGTGAGCGCTCACCATCCCCTCTGCGG...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LLPPPCKVSHKHRTRGASVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...GGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCCCGCAGAGGGGATGGTaGGCGCTCACGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: HARLKPRLVWKNVISSVCPQRGW*ALTAPR
Trigger: CCTCGGAGCCGTGAGCGCTCACCATCCCCTCTGCGG...GCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: AMVIGCADGREHPTPHTCRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCACCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAACCCAAGGCCCTGCCTaGAGCGGGACGTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPTQGPA*SGTSPP
Trigger: AGGCGGAGACGTCCCGCTCCAGGCAGGGCCTTGGGT...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR TCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCGCAGAGGGGATGGTaGGCGCTCACGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSPQRGW*ALTAPR
Trigger: CCTCGGAGCCGTGAGCGCTCACCATCCCCTCTGCGG...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR TCA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGCCGCAGAGGGGATGGTaGGCGCTCACGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKPQRGW*ALTAPR
Trigger: CCTCGGAGCCGTGAGCGCTCACCATCCCCTCTGCGG...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR TCA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCCTCCCAGTACCAGCCTaGTGTGCCCAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCLPVPA*CAQGWE
Trigger: CTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAG...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAAGTGGGCAGTGGGCTTaGGACCACGTTGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPSGQWA*DHVAPQ
Trigger: CTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACT...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCATCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTACCCAAGGCCCTGCCTaGAGCGGGACGTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLTQGPA*SGTSPP
Trigger: AGGCGGAGACGTCCCGCTCCAGGCAGGGCCTTGGGT...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396593.6
CDS-3UTR TCA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: AMVIGCADGREHPTPHTCGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCGCCTGTGGGCGCGGGTaGAGTTTTTCTCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTACGRG*SFSPAP
Trigger: AGGCGCTGGAGAAAAACTTCACCCGCGCCCACAGGC...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396593.6
CDS-3UTR TCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCCAAGGAGGAACTCCTaGGTCCGGGGAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRPRRNS*VRGAPT
Trigger: GGTGGGGGCTCCCCGGACTCAGGAGTTCCTCCTTGG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610831.4
ENST00000614449.4
CDS-3UTR GCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGGGCTTGGGACCACGTTaGCCCGCAGAGGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLGLGPR*PAEGMV
Trigger: CACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCC...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACCTCCCAGTACCAGCCTaGTGTGCCCAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VVAMVIGCADGREHPTPHLPVPA*CAQGWE
Trigger: CTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAG...GTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGAGTGGGCAGTGGGCTTaGGACCACGTTGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLSGQWA*DHVAPQ
Trigger: CTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACAGTGGGCAGTGGGCTTaGGACCACGTTGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VVAMVIGCADGREHPTPHSGQWA*DHVAPQ
Trigger: CTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACT...GTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCATCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGAVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGTCCCCACTCCCTCTGTaGCCCCTGCCAGGCGATTTC +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLSPLPL*PLPGDF
Trigger: GAAATCGCCTGGCAGGGGTCACAGAGGGAGTGGGGA...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGGCCAGGGCCCCCGCATaGCCTACCAGCACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRARAPA*PTSTGH
Trigger: ATGACCTGTGCTGGTAGGTCATGCGGGGGCCCTGGC...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610831.4
ENST00000614449.4
CDS-3UTR GCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCCCTGCAATCCGTTCTaGTCCGCCAGCCGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLPCNPF*SASRFA
Trigger: AGCGAAGCGGCTGGCGGAGCAGAACGGATTGCAGGG...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311052.10
CDS-3UTR GCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCGGCTTGGGACCACGTTaGCCCGCAGAGGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSGLGPR*PAEGMV
Trigger: CACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCC...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR GCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTGGCTTGGGACCACGTTaGCCCGCAGAGGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSGLGPR*PAEGMV
Trigger: CACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCC...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPPPCKVSHKHRTRGASPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...GGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGCCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCCTCCCAGTACCAGCCTaGTGTGCCCAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLLPVPA*CAQGWE
Trigger: CTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAG...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCGCCTGCAATCCGTTCTaGTCCGCCAGCCGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFACNPF*SASRFA
Trigger: AGCGAAGCGGCTGGCGGAGCAGAACGGATTGCAGGC...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611932.4
CDS-3UTR GCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTATGGTGCCGCGAAAATaGCAAGCGCACGGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGAMVPRK*QAHGGL
Trigger: GAGCCCGCCGTGCGCTTGGCATTTTCGCGGCACCAT...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619881.4
CDS-3UTR GCA 90 bp GTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACTCCCTCTGTGACCCCTaGCAGGCGATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: VVAMVIGCADGREHPTPHSLCDP*QAISPP
Trigger: GGGCGGTGAAATCGCCTGGCAGGGGTCACAGAGGGA...GTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCAGTGGGCAGTGGGCTTaGGACCACGTTGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLSGQWA*DHVAPQ
Trigger: CTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACT...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGEVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCCTGAGATTGAGCCCTaGCTGGTCCCCACTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVPEIEP*LVPTPS
Trigger: AGAGGGAGTGGGGACCAGTCAGGGCTCAATCTCAGG...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619881.4
CDS-3UTR TCA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACGCCAGGGCCCCCGCATaGCCTACCAGCACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHARAPA*PTSTGH
Trigger: ATGACCTGTGCTGGTAGGTCATGCGGGGGCCCTGGC...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610831.4
ENST00000614449.4
CDS-3UTR GCA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGCTTGGGACCACGTTaGCCCGCAGAGGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQGLGPR*PAEGMV
Trigger: CACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCC...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: AMVIGCADGREHPTPHTCMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCACCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AMVIGCADGREHPTPHTCVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGCTCCCAGTACCAGCCTaGTGTGCCCAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKLPVPA*CAQGWE
Trigger: CTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAG...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCGGGAAGAGCTTCCCCTaGACGCAGAGAACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIGKSFP*TQRTGG
Trigger: GCCACCTGTTCTCTGCGTGCAGGGGAAGCTCTTCCC...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618335.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCCTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTISLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLSLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCATCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPSLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
3UTR CAA 72 bp CCCCAGGAGAGGCGCAAGGGGCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCAAGGTCCCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PQERRKGHLGGN*PWRSHARSLSG
Trigger: GCCTGACAGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGCCTCTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: QHFERPRWADHLRSGVQDGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIEVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTREVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFEVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCCGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: LLPPPCKVSHKHRTRGASMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...GGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCTATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AMVIGCADGREHPTPHTCYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCTCCCAGTACCAGCCTaGTGTGCCCAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLLPVPA*CAQGWE
Trigger: CTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAG...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCGGCACGGGGCTAGCTaGCTCCTTTTACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLRHGAS*LLLLSH
Trigger: GTGTGAGAGTAAAAGGAGGCAGCTAGCCCCGTGCCG...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396593.6
ENST00000618335.4
CDS-3UTR GCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAACTCACTCAGAGATGTaGAGGAAGATGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPTHSEM*RKMSGP
Trigger: CGGCCCCGACATCTTCCTGCACATCTCTGAGTGAGT...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGCTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPTRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPATRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGATRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLTRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HARLKPRLVWKNVISSVCTRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...GCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATGCCTCCAGGGAACTGTaGAACACGTCGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ASSLQSLPQAQDKGCFHHASREL*NTSQRA
Trigger: AGCTCTCTGCGACGTGTTCCACAGTTCCCTGGAGGC...ATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR TCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCGTGCCTGGTGCCAGGTaGGTGATGACGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLVPGAR*VMTTST
Trigger: CGTGGAGGTCGTCATCACTCACCTGGCACCAGGCAC...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: AQGALRWKFALEKSRKVPPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: HARLKPRLVWKNVISSVCEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...GCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ASSLQSLPQAQDKGCFHHEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...ATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLEVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGGTAATCCCAGCACTTTaGGAGGCCGAGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLVIPAL*EAEMGR
Trigger: TCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTAC...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: QHFERPRWADHLRSGVQDGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPARKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGCGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTATGACATGGCTGACCTaGACCGCCAGCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSMTWLT*TASAAC
Trigger: GCAGGCTGCGCTGGCGGTTCAGGTCAGCCATGTCAT...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561530.5
CDS-3UTR GCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: VVAMVIGCADGREHPTPHAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...GTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAACTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGAVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCTATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACCCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QHFERPRWADHLRSGVQDPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAACCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCGGCACGGGGCTAGCTaGCTCCTTTTACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSRHGAS*LLLLSH
Trigger: GTGTGAGAGTAAAAGGAGGCAGCTAGCCCCGTGCCG...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGGAGGCTCAGATGACATaGCTGACCCTGCAATCCGTT +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGEAQMT*LTLQSV
Trigger: AACGGATTGCAGGGTCAGCCATGTCATCTGAGCCTC...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311052.10
CDS-3UTR CCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCACTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTCTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGALMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKTRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLTRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSSLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAACAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGCAGGGGTGGGAGTGCTaGGAGAACTGTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKQGWEC*ENCLPQ
Trigger: CTGGGGAAGACAGTTCTCCCAGCACTCCCACCCCTG...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLPPPCKVSHKHRTRGASQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...GGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCGAGGCTCAGATGACATaGCTGACGTGTCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSEAQMT*LTCLPA
Trigger: TGCCGGGAGACACGTCAGCCATGTCATCTGAGCCTC...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTGCCTCCAGGGAACTGTaGAACACGTCGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSASREL*NTSQRA
Trigger: AGCTCTCTGCGACGTGTTCCACAGTTCCCTGGAGGC...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR CCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCGAGGCTCAGATGACATaGCTGACCTTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIEAQMT*LTFWRR
Trigger: CCTCCTCCAGAAGGTCAGCCATGTCATCTGAGCCTC...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610831.4
CDS-3UTR CCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTGAGGCTCAGATGACATaGCTGACCTCCTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLEAQMT*LTSCPF
Trigger: GAAGGGACAGGAGGTCAGCCATGTCATCTGAGCCTC...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567554.5
3UTR CAA 72 bp GGAGAGGCGCAAGGGGCACTTAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTCCCTGTCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GEAQGALRWKFA*EKSRKVPVRLP
Trigger: TGGCAGCCTGACAGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACACCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGTAATCCCAGCACTTTaGGAGGCCGAGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTVIPAL*EAEMGR
Trigger: TCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTAC...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCATGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR GCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCATATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATTATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASSLQSLPQAQDKGCFHHYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...ATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGCCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAACCGCCAGCGCAGCCTaGGGAAAGGGGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSTASAA*GKGACG
Trigger: CCCACAGGCCCCCTTTCCGCAGGCTGCGCTGGCGGT...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396593.6
CDS-3UTR GCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCATTTCACTTCCGGCCTaGAAACCTGAACCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSISLPA*KPEPPA
Trigger: CGCTGGCGGTTCAGGTTTGCAGGCCGGAAGTGAAAT...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR GCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCTCACACACCCTCTCATaGCAGAAGAAGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFSHTLS*QKKSEP
Trigger: GGGCTCTGACTTCTTCTGGCATGAGAGGGTGTGTGA...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396593.6
ENST00000618335.4
CDS-3UTR GCA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAACGGCACGGGGCTAGCTaGCTCCTTTTACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQRHGAS*LLLLSH
Trigger: GTGTGAGAGTAAAAGGAGGCAGCTAGCCCCGTGCCG...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396593.6
ENST00000618335.4
CDS-3UTR CCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCAGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPGAAIS*SNEAMA
Trigger: GGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCC...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACCTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAACTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAACTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCCCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: APSRVEECHLQCLLPPPCPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSSLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGTCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRSLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCATCCCTGGGATGGGGTTaGAACCTCCACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPSLGWG*NLHSAT
Trigger: GGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGA...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AMVIGCADGREHPTPHTCQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAACGGAAAGGGGGCCTGTaGGCGCGGGTGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQRKGGL*ARVKFF
Trigger: GAAAAACTTCACCCGCGCCCACAGGCCCCCTTTCCG...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396593.6
CDS-3UTR CCA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAGAGAGGCCTCCTATTTaGCAGAGATTTCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: THPGTITSTVSPPASHPPERPPI*QRFPHL
Trigger: TAGGTGGGGAAATCTCTGCCAAATAGGAGGCCTCTC...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGGAGGCTCAGATGACATaGCTGACGTGTCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKEAQMT*LTCLPA
Trigger: TGCCGGGAGACACGTCAGCCATGTCATCTGAGCCTC...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396593.6
ENST00000618335.4
CDS-3UTR TCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTGTAGACGGGGCCCTGTaGAGCCCGCACCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAVDGAL*SPHRRR
Trigger: TCGGCGACGGTGCGGGCTTCACAGGGCCCCGTCTAC...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGAGAAATACCACCCTTaGTCCACTCCCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQEKYHP*STPWDG
Trigger: CCCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTC...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VVAMVIGCADGREHPTPHLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...GTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTEVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCAGAGGTTGCAGTAAGCTaGGATCGGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPEVAVS*DRATAL
Trigger: GAGTGCAGTGGCCCGATCTCAGCTTACTGCAACCTC...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QHFERPRWADHLRSGVQDRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCTGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAACTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSLLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACATATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCTATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTGGAGGGCAGAGGTTaGAGTAAGCTGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSLEGRG*SKLRSG
Trigger: GCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAG...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAATTTCACTTCCGGCCTaGAAACCTGAACCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKISLPA*KPEPPA
Trigger: CGCTGGCGGTTCAGGTTTGCAGGCCGGAAGTGAAAT...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396593.6
CDS-3UTR GCA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCTCACACACCCTCTCATaGCAGAAGAAGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSSHTLS*QKKSEP
Trigger: GGGCTCTGACTTCTTCTGGCATGAGAGGGTGTGTGA...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSPASGQ*AWDHVA
Trigger: GGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQALVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCTCGTCGCCTTCCACTaGGACATACTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKLVAFH*DILPFH
Trigger: GTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAG...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQATRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTCCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASSLQSLPQAQDKGCFHHGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...ATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLTGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTITGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLTGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLTGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGCTCAAGCGCCACGTTTaGATCCCTGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: MSSPVSAASSLQSLPQAQLKRHV*IPEQLS
Trigger: TGACAGCTGCTCAGGGATCCAAACGTGGCGCTTGAG...CTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR TCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLEMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPEMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGTAATCCCAGCACTTTaGGAGGCCGAGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTVIPAL*EAEMGR
Trigger: TCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTAC...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAGTAATCCCAGCACTTTaGGAGGCCGAGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTVIPAL*EAEMGR
Trigger: TCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTAC...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGGTAATCCCAGCACTTTaGGAGGCCGAGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGVIPAL*EAEMGR
Trigger: TCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTAC...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACACGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCTGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGAACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCATGCTTGGTGCCTGGTaGCAGGTGAGTGATGACGAC +
Preference number: 4 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSMLGAW*QVSDDD
Trigger: GTCGTCATCACTCACCTGGCACCAGGCACCAAGCAT...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQAAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGCCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTCCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGAPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACTCACACACCCTCTCATaGCAGAAGAAGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHSHTLS*QKKSEP
Trigger: GGGCTCTGACTTCTTCTGGCATGAGAGGGTGTGTGA...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396593.6
ENST00000618335.4
CDS-3UTR CCA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQAGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRGVMKP*PLDRQK
Trigger: CTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQAIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QHFERPRWADHLRSGVQDGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTTGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPLPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGCTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRLPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCCTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PPPCKVSHKHRTRGASTILPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGLLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACGAGAGGCCTCCTATTTaGCAGAGATTTCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDERPPI*QRFPHL
Trigger: TAGGTGGGGAAATCTCTGCCAAATAGGAGGCCTCTC...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396593.6
CDS-3UTR CCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGAGGCTCAGATGACATaGCTGACCCTCACGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQEAQMT*LTLTQC
Trigger: ACACTGCGTGAGGGTCAGCCATGTCATCTGAGCCTC...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR CCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGACATGGCTGACCTTCTaGAGGAGGTGGCATCCTACC +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGTWLTF*RRWHPT
Trigger: GGTAGGATGCCACCTCCTCCAGAAGGTCAGCCATGT...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610831.4
CDS-3UTR TCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAACCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPEMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCRIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGCCAAGGAGGAACTCCTaGGTCCGGGGAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKPRRNS*VRGAPT
Trigger: GGTGGGGGCTCCCCGGACTCAGGAGTTCCTCCTTGG...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610831.4
ENST00000614449.4
CDS-3UTR GCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTAGGTCCCTGTCAGGCTaGCAGGGGGCCAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: KMADGRQDLDSGILNFSSRSLSG*QGARSG
Trigger: CCCAGATCTGGCCCCCTGGCAGCCTGACAGGGACCT...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAATATGCCGCCTCCCACTaGAAAGGCACCAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQYAASH*KGTKRQ
Trigger: TTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATA...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAGCCCAGGGGTGGGAGTaGTGGGAGAACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSAQGWE*WENCLP
Trigger: GGGAAGACAGTTCTCCCAGCACTCCCACCCCTGGGC...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACACCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ASSLQSLPQAQDKGCFHHWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...ATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACACCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: KMADGRQDLDSGILNFSSSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLSSSGE*AVGLGP
Trigger: TGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGA...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGAGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCAGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAACAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGAAACAGAGCCGGCTCTaGGTGAAAGCTTTAGTTATG +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVKQSRL*VKALVM
Trigger: CATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTT...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCAAACAGAGCCGGCTCTaGGTGAAAGCTTTAGTTATG +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLKQSRL*VKALVM
Trigger: CATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAATTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAATTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTTTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AQGALRWKFALEKSRKVPFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACACTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTLPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGCTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRLPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCATTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPLLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTTTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLLLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: AQGALRWKFALEKSRKVPMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQEMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKEMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQALLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAGGCGGGAGAGGAGGGTaGGGATGTACAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSGGRGG*GCTRSI
Trigger: GATGCTCCTTGTACATCCTCACCCTCCTCTCCCGCC...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAAGAGGCTTGGGGCAGTaGAAGCCCTCTCGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKRGLGQ*KPSRVL
Trigger: CAAGACCCGAGAGGGCTTTCACTGCCCCAAGCCTCT...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGARIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLRIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACCAGACAGGCAGCTATaGCGCCTCCCACTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSPDRQL*RLPLQR
Trigger: CCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTCCCTGCCAAAAAGTTTaGAATGTCGGCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AQGALRWKFALEKSRKVPPCQKV*NVGSKV
Trigger: CACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGG...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLSFQKV*LPLFSG
Trigger: TCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAATGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGCCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCACCAGGTCTCATGCTTaGTGCCTGGTGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LIRVEEYLPDEAVHASSITRSHA*CLVPGE
Trigger: CTCACCTGGCACCAGGCACCAAGCATGAGACCTGGT...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQAKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAACCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGCCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGGTGGAAATTTGCCTTaGAGAAGTCACGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QPSQELENCFAQAPGEAQGGNLP*RSHARS
Trigger: GGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACC...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCCAAGGGGCACTTAGGTaGAAATTTGCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPQGALR*KFALEK
Trigger: CTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTG...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKTGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCATTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTTTGAGAGGCCGAGATaGGCAGATCATCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGFERPR*ADHLRS
Trigger: TGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAA...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAACTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKLPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCCGGACGCTGTGCAGATaGTGCCGCGAAAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIRTLCR*CRENAK
Trigger: CTTGGCATTTTCGCGGCACCATCTGCACAGCGTCCG...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619881.4
CDS-3UTR TCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGCCTCCAGGAGATACTTaGGAGGGACCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLPPGDT*EGPCPA
Trigger: AGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGG...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGGGTCATAGGCTGTGCTaGTGGCCGGGAACACCCCAC +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKGHRLC*WPGTPH
Trigger: GTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACC...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGGAAATGGCTGTTGAGTaGTGGTCACACAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSREMAVE*WSHNQK
Trigger: CTTCTGGTTGTGTGACCATCACTCAACAGCCATTTC...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDRIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRRIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAACGTCCCTTCCAGCTCTaGCATCCTGCGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKRPFQL*HPAVLE
Trigger: TTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACG...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCACAGGACAAGGGGTaGTTCCACCATCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKAQDKG*FHHLLG
Trigger: TCCTAGGAGATGGTGGAAGCACCCCTTGTCCTGTGC...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCGTCATCTCCAGTGTCTaGTGCCTCCTCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIVISSV*CLLPAK
Trigger: CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTATGGTGAGAGGTTGTTaGAATGGTCATAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSMVRGC*NGHRLC
Trigger: GCACAGCCTATGACCATTGCAACAACCTCTCACCAT...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDSFQKV*LPLFSG
Trigger: TCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACT...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLSFQKV*LPLFSG
Trigger: TCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACT...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQSFQKV*LPLFSG
Trigger: TCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACT...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCCACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCCCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTCTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGALLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCACTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPALLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQAAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCATCCACTCCCTGGGATaGGGTTGGAACCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIIHSLG*GWNLHS
Trigger: TGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGAT...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCAAACAGAGCCGGCTCTaGGTGAAAGCTTTAGTTATG +
Preference number: 4 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPKQSRL*VKALVM
Trigger: CATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTT...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACTTCCAGCATCAAACTaGACGTTTACTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPLPASN*TFTVCP
Trigger: TGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAG...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKLLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: LQCLLPPPCKVSHKHRTRSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...CCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAAGAAAAGGCCACCTTTaGCCCAGCAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKRKGHL*PSRRQR
Trigger: CCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCT...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAATGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTCCACGTTTGGATCCCTaGGCAGCTGTCACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAPRLDP*AAVTSL
Trigger: CAGGCTTGTGACAGCTGCTCAGGGATCCAAACGTGG...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR TCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTCCACGTTTGGATCCCTaGGCAGCTGTCACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KMADGRQDLDSGILNFSSPRLDP*AAVTSL
Trigger: CAGGCTTGTGACAGCTGCTCAGGGATCCAAACGTGG...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR GCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGCCAGACCAGGTCTCATaGTTGGTGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKPDQVS*LVPGAR
Trigger: CCTGGCACCAGGCACCAAGCATGAGACCTGGTCTGG...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTCTGCTGCCTCCTCCCTaGAAAGTCTCCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHALLPPP*KVSHKH
Trigger: GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AQGALRWKFALEKSRKVPSFQKV*LPLFSG
Trigger: TCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACT...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGTGGACGTTTACTGTCTaGCCAAAAGCCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRWTFTV*PKASFQ
Trigger: TTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCA...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: EVVAMVIGCADGREHPTPHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCACACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTCACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGAHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCATGTGTCTGAGCAGCTaGAGAAATACCACCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSMCLSS*RNTTLD
Trigger: ATCAAGGGTGGTATTTCTCCAGCTGCTCAGACACAT...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LIRVEEYLPDEAVHASSIELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGTTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKLLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAATTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQLLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCATTATTGGGAGAAAGATaGCTGATGGGAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RMSSPVSAASSLQSLPQALLGER*LMGGKI
Trigger: GATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTGAGGCTCAGATGACATaGCTGACGTGTCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAEAQMT*LTCLPA
Trigger: TGCCGGGAGACACGTCAGCCATGTCATCTGAGCCTC...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396593.6
ENST00000618335.4
CDS-3UTR CCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCCTCAAGCGCCACGTTTaGATCCCTGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPLKRHV*IPEQLS
Trigger: TGACAGCTGCTCAGGGATCCAAACGTGGCGCTTGAG...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR CCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAGAGGCTCAGATGACATaGCTGACCCTCACGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSEAQMT*LTLTQC
Trigger: ACACTGCGTGAGGGTCAGCCATGTCATCTGAGCCTC...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611932.4
ENST00000614449.4
CDS-3UTR TCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKSTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGGTAATCCCAGCACTTTaGGAGGCCGAGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLVIPAL*EAEMGR
Trigger: TCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTAC...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: CHLQCLLPPPCKVSHKHRSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...CCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACATCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSRIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCCAGGCTGTCAGGATaGAAGCTACCTACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKARLSG*KLPTLF
Trigger: GAAAAGAGTAGGTAGCTTGCATCCTGACAGCCTGGC...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KMADGRQDLDSGILNFSSMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTATGTCGGCAGCAAAGTaGAAACAGAGCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAMSAAK*KQSRLW
Trigger: CCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACAT...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCCACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGCTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAACTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGCTCATGCTTGGTGCCTaGTGCCAGGTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKLMLGA*CQVSDD
Trigger: GTCATCACTCACCTGGCACCAGGCACCAAGCATGAG...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAAAGCCCCGTCTCGTGTaGAAGAATGTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKKPRLV*KNVISS
Trigger: ACTGGAGATGACATTCTTCCACACGAGACGGGGCTT...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LLPAKSPTSTGQGVLPPSLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...AGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACACTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: KMADGRQDLDSGILNFSSDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAATGCTCTTCAGATGGTaGGAGGTTGTTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKMLFRW*EVVAMV
Trigger: GACCATTGCAACAACCTCTCACCATCTGAAGAGCAT...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGAGGGATTCTGTGGGTTaGGCCCATGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKRDSVG*AHVSEQ
Trigger: CTGCTCAGACACATGGGCTCAACCCACAGAATCCCT...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCTTCCAGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAACTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASSIKLDVYCLPKSQFPKLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...TTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACTCTACTTTGAAATCATaGCTAAAGCCAAACCACAAC +
Preference number: 4 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHSTLKS*LKPNHN
Trigger: GTTGTGGTTTGGCTTTAGTCATGATTTCAAAGTAGA...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCGCTGACAAAGGATTCTaGCAAGACAGAATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPADKGF*QDRIPG
Trigger: CCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGC...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACACTTCTCATTCTTGGGTaGGATGGAGCACATTTTATA +
Preference number: 4 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTLLILG*DGAHFI
Trigger: TATAAAATGTGCTCCATCCCACCCAAGAATGAGAAG...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGGGAAGAGGGATTCTGTaGGTTGAGCCCATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKGRGIL*VEPMCL
Trigger: CAGACACATGGGCTCAACCCACAGAATCCCTCTTCC...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGCTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGGAATTGCCAGAACCCTaGAGGGCAGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLELPEP*RAEVAV
Trigger: TACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTC...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGGACTGTACCAGCAGATaGGCCCTTGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKDCTSR*ALGKPT
Trigger: TGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTC...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHASTFYR*PRRLPL
Trigger: CAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCT...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGTGGGAGAAAGATGGCTaGTGGGAGGCAAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKWEKDG*WEARSG
Trigger: TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCA...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGACCGGCAGAAGCATTTaGAGACTCCTTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKTGRSI*RLLCRR
Trigger: CCGTCTACAAAGGAGTCTGCAAATGCTTCTGCCGGT...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGATCTCCAGTGTCTGCTaGCTCCTCCCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKISSVC*LLPAKS
Trigger: AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp CTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: LPKSLQCRQQSANRAGSGINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...CCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCACTCGCAATCAACATaGGTATTTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRHSQST*VFAILK
Trigger: TTTGAGAATAGCAAATACGCATGTTGATTGCGAGTG...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCCCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACCAGCTCTGACATCCTaGGGTTCTAGAATACCCATT +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSPALTS*GSRIPI
Trigger: AATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGCCACTCAGCCACCAGTaGGCACCTCTCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLPLSHQ*APLLFK
Trigger: TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGG...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTACAGGGGCTGTGAAATaGCTGTTGAGTGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHATGAVK*LLSDGH
Trigger: GTGACCATCACTCAACAGCCATTTCACAGCCCCTGT...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TCCCACCCTGCCAAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SHPAKKFAMSAAKCKQSRLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...CCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGCAGGCGAGGAAACAATaGCCAGGACCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKQARKQ*PGPNCG
Trigger: ACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTG...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGCTCCTTCAACTTTCTTaGCTTTGCCAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKLLQLS*LCQAVR
Trigger: CCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAG...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TGGATGGATCGGGACAAAGTTTTTAAACAAAGACTGTGTCCTCTCCACAAGCCCAAACAGAGCCGGCTCTaGGTGAAAGCTTTAGTTATG +
Preference number: 4 (lower is better)
Translates to: WMDRDKVFKQRLCPLHKPKQSRL*VKALVM
Trigger: CATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTT...GGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR TCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAAGAATACCCATTGATTaGAAGAGCTGTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSRIPID*KSCGQT
Trigger: TGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCT...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGGCAGCTTCTCATTCTTaGGTGGGATGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKAASHS*VGWSTF
Trigger: AAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGC...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTAAACAGAGCCGGCTCTaGGTGAAAGCTTTAGTTATG +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAKQSRL*VKALVM
Trigger: CATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTT...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGAGTTTCCAAAAGGTTTaGTTGCCTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKSFQKV*LPLFSG
Trigger: TCCACTGAACAGAGGCAAGCAAACCTTTTGGAAACT...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CCA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCACTACTCTTTTCTGGATaGATCGGGACAAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LLGERWLMGGKIWIQESSLLFSG*IGTKFL
Trigger: TAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp AGCATCAAACTGGACGTTTACTGTCTGCCCAAAAGCCAGTTTCCAAAAGGTTTGATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: SIKLDVYCLPKSQFPKGLINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...CAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR GCA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGATCAACATGCGTATTTaGTATTCTCAAACAACTCCC +
Preference number: 4 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKINMRI*YSQTTP
Trigger: GGGAGTTGTTTGAGAATAGCAAATACGCATGTTGAT...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 90 bp CCTGTGAAGCCCGCACCGTCGCCGAGAAGGTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCACGTTGCCCCGCAGAGGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PVKPAPSPRRSSSGE*AVGLGPRCPAEGMV
Trigger: CACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGACGGTGCGGGCTTCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562843.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS GCA 90 bp AGAAGGTCCTCGTCCGGCGAGTGGGCAGTGGGCTTGGGACCACGTTaGCCCGCAGAGGGGATGGTGAGCGCTCACGGCTCCGAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: RRSSSGEWAVGLGPR*PAEGMVSAHGSEGC
Trigger: ACACCCCTCGGAGCCGTGAGCGCTCACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562586.1
ENST00000562843.5
ENST00000563815.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000569572.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 90 bp CCAGCCTGCTCCAGACTCACGCCGAGAAGGTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCACGTTGCCCCGCAGAGGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PACSRLTPRRSSSGE*AVGLGPRCPAEGMV
Trigger: CACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGTGAGTCTGGAGCAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS GCA 90 bp TCAAAGGGGACAGGAGCGGTGCTGCGTCGCAGGGCTCGGACGCTGTaGAGATGGTGCCGCGAAAATGCCAAGCGCACGGCGGGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SKGTGAVLRRRARTL*RWCRENAKRTAGSV
Trigger: GACTGAGCCCGCCGTGCGCTTGGCATTTTCGCGGCACCATCTGCACAGCGTCCGAGCCCTGCGACGCAGCACCGCTCCTGTCCCCTTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568117.5
ENST00000619881.4
CDS-3UTR CAA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: AMVIGCADGREHPTPHTCEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS GCA 90 bp CTCTGGCCTCAGGCAAGAGATCCATCTGAGAACGCGTCCCCAGCCTaGTCCAGACTCACGCCGAGAAGGTCCTCGTCCGGCGAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LWPQARDPSENASPA*SRLTPRRSSSGEWA
Trigger: TGCCCACTCGCCGGACGAGGACCTTCTCGGCGTGAGTCTGGAGCAGGCTGGGGACGCGTTCTCAGATGGATCTCTTGCCTGAGGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS-3UTR CAA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: THPGTITSTVSPPASHPPEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CAA 90 bp TGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: CLLPPPCKVSHKHRTRGAEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...AGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS TCA 90 bp CCCCATCAAGCCCTGGCCAGGACCGCCATGTACAGTCACACAGGCTaGGGACTGCACAACCCTCAACCCTGGGAGCCGCTCACAAAGACG +
Preference number: 5 (lower is better)
Translates to: PHQALARTAMYSHTG*GLHNPQPWEPLTKT
Trigger: CGTCTTTGTGAGCGGCTCCCAGGGTTGAGGGTTGTGCAGTCCTCAGCCTGTGTGACTGTACATGGCGGTCCTGGCCAGGGCTTGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS GCA 90 bp CCCCAGCCAGGCCACCCAGACCTGCCGCTGACTCACTCAGAGATGTaGAGGAAGATGTCGGGGCCGCCATCAGCTGGAGTAATGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PQPGHPDLPLTHSEM*RKMSGPPSAGVMKP
Trigger: TGGCTTCATTACTCCAGCTGATGGCGGCCCCGACATCTTCCTGCACATCTCTGAGTGAGTCAGCGGCAGGTCTGGGTGGCCTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562843.5
ENST00000563815.5
CDS CCA 90 bp CCAGGGAACTGTGGAACACGTCGCAGAGAGCTCAAGCGCCACGTTTaGATCCCTGAGCAGCTGTCACAAGCCTGCACCCAGGACTGGGGG +
Preference number: 5 (lower is better)
Translates to: PGNCGTRRRELKRHV*IPEQLSQACTQDWG
Trigger: CCCCCAGTCCTGGGTGCAGGCTTGTGACAGCTGCTCAGGGATCCAAACGTGGCGCTTGAGCTCTCTGCGACGTGTTCCACAGTTCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000565287.5
ENST00000567626.1
ENST00000569398.5
ENST00000569572.1
ENST00000611932.4
ENST00000614449.4
CDS-3UTR CAA 90 bp TCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCGGGCTTGGGACCACGTaGCCCCGCAGAGGGGATGGT +
Preference number: 5 (lower is better)
Translates to: SSLQSLPQAQDKGCFHHLGLGTT*PRRGDG
Trigger: ACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCC...GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAAGACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCGGGCTTGGGACCACGTaGCCCCGCAGAGGGGATGGT +
Preference number: 5 (lower is better)
Translates to: KDTPRDNHKYRVAPSLTSGLGTT*PRRGDG
Trigger: ACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCC...GGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CAA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACGGGCTTGGGACCACGTaGCCCCGCAGAGGGGATGGT +
Preference number: 5 (lower is better)
Translates to: QHFERPRWADHLRSGVQDGLGTT*PRRGDG
Trigger: ACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCC...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS TCA 90 bp GGCCAGAGACACAGTGAATCTCTGGCCTCAGGCAAGAGATCCATCTaGGAACGCGTCCCCAGCCTGCTCCAGACTCACGCCGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GQRHSESLASGKRSI*ERVPSLLQTHAEKV
Trigger: GACCTTCTCGGCGTGAGTCTGGAGCAGGCTGGGGACGCGTTCTCAGATGGATCTCTTGCCTGAGGCCAGAGATTCACTGTGTCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS-3UTR CAA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCGGGCTTGGGACCACGTaGCCCCGCAGAGGGGATGGT +
Preference number: 5 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSGLGTT*PRRGDG
Trigger: ACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCC...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGGCTTGGGACCACGTaGCCCCGCAGAGGGGATGGT +
Preference number: 5 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTGLGTT*PRRGDG
Trigger: ACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCC...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: WKNVISSVCCLLPAKSPTEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...TGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PPPCKVSHKHRTRGASTISSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp ACACACCCAGGGACAATCACAAGTACCGTGTCGCCCCCAGCCTCACATCCCCCAATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: THPGTITSTVSPPASHPPMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...TGGGGGATGTGAGGCTGGGGGCGACACGGTACTTGTGATTGTCCCTGGGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562843.5
CDS-3UTR CAA 90 bp CTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: LLPPPCKVSHKHRTRGASMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...GGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 90 bp GTCCGGGACATAGGCCCAAAAATGGCCAGAGACACAGTGAATCTCTaGCCTCAGGCAAGAGATCCATCTGAGAACGCGTCCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VRDIGPKMARDTVNL*PQARDPSENASPAC
Trigger: GCAGGCTGGGGACGCGTTCTCAGATGGATCTCTTGCCTGAGGCCAGAGATTCACTGTGTCTCTGGCCATTTTTGGGCCTATGTCCCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS-3UTR CAA 90 bp CCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCATCATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: PPPCKVSHKHRTRGASTIMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...GATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: RLKPRLVWKNVISSVCCLMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...GAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: PRLVWKNVISSVCCLLPAMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...TGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: AQGALRWKFALEKSRKVPSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: QCLLPPPCKVSHKHRTRGGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...ACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: CLLPAKSPTSTGQGVLPPGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...TGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGATGGCTGACCTGAGATaGAGCCCTGACTGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPVSAASSLQSLPQAQDKMADLR*SPDWSP
Trigger: TGGGGACCAGTCAGGGCTCAATCTCAGGTCAGCCAT...CTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619881.4
CDS-3UTR CAA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCTGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: APSRVEECHLQCLLPPPCCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...GCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCATCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPSSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: LLPPPCKVSHKHRTRGASAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...GGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCCACACCTGCTCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: AMVIGCADGREHPTPHTCSTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...GCAGGTGTGGGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 90 bp TTCCACATCAGAGATGTGCAGGAAGATGTCGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCCCTTGGACCGGCAGAAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: FHIRDVQEDVGAAIS*SNEAMALGPAEAFA
Trigger: TGCAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCCGACATCTTCCTGCACATCTCTGATGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 90 bp GCAACTGCCCACCCATTGCCACTCCCAGCTGGTAACAGGTTCTTCTaGGCTGGGCAGTACCCTGAATTTACAAGGCGCCTTCCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: ATAHPLPLPAGNRFF*AGQYPEFTRRLPSF
Trigger: GAAACTAGGAAGGCGCCTTGTAAATTCAGGGTACTGCCCAGCCCAGAAGAACCTGTTACCAGCTGGGAGTGGCAATGGGTGGGCAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563815.5
ENST00000569572.1
CDS-3UTR CAA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGGAGAAATACCACCCTaGATCCACTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PSRVEECHLQCLLPPPCKGEIPP*IHSLGW
Trigger: CCATCCCAGGGAGTGGATCAAGGGTGGTATTTCTCC...TTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: SSVCCLLPAKSPTSTGQGRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...CCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GAGGTTGTTGCAATGGTCATAGGCTGTGCTGATGGCCGGGAACACCCCACACCCGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: EVVAMVIGCADGREHPTPAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: HARLKPRLVWKNVISSVCAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...GCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: VSAASSLQSLPQAQDKGCSTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...GCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: AASSLQSLPQAQDKGCFHQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...GTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp ATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ISSVCCLLPAKSPTSTGQEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...TTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS GCA 90 bp TGCATCTGCCAGGCATTATGTGGGTCCTTTGCAGCCCTGGTGCTGTaGCCATTTTGCAGCTGCAGAATTCACAGTCTCACAGGGAACCAG +
Preference number: 5 (lower is better)
Translates to: CICQALCGSFAALVL*PFCSCRIHSLTGNQ
Trigger: CTGGTTCCCTGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTGGCAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS GCA 90 bp AGACCTGCATCTGCCAGGCATTATGTGGGTCCTTTGCAGCCCTGGTaGTGTGCCCATTTTGCAGCTGCAGAATTCACAGTCTCACAGGGA +
Preference number: 5 (lower is better)
Translates to: RPASARHYVGPLQPW*CAHFAAAEFTVSQG
Trigger: TCCCTGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTGGCAGATGCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS CCA 90 bp CTGAGACCTGCATCTGCCAGGCATTATGTGGGTCCTTTGCAGCCCTaGTGCTGTGCCCATTTTGCAGCTGCAGAATTCACAGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: LRPASARHYVGPLQP*CCAHFAAAEFTVSQ
Trigger: CTGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTGGCAGATGCAGGTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS-3UTR CAA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAEWAVG*GPRCPA
Trigger: TGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTC...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAATGAAGCCATGGCCCTaGGACCGGCAGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: GRMSSPVSAASSLQSLPQMKPWP*DRQKHL
Trigger: CAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCAT...TTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: PVSCGRMSSPVSAASSLQRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...TTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: SSPVSAASSLQSLPQAQDAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...GTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTTCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: VCCLLPAKSPTSTGQGVLSTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...AAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: SPVSCGRMSSPVSAASSLTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...CAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: SVCCLLPAKSPTSTGQGVTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...CACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACCTTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: LPPPCKVSHKHRTRGASTFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...GGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCAGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS TCA 90 bp CCTGCAGCTTCTCATTCTTGGGTGGGATGGAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTGGGACATACTCCCCTTCCACATCAG +
Preference number: 5 (lower is better)
Translates to: PAASHSWVGWSTFYR*PRRLPLGHTPLPHQ
Trigger: CTGATGTGGAAGGGGAGTATGTCCCAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 90 bp CAGCTGCAGAATTCACAGTCTCACAGGGAACCAGACTCTCATGTGTaGTTAAAGCCCAGCGATTCTGACCCCAGCAACTGCCCACCCATT +
Preference number: 5 (lower is better)
Translates to: QLQNSQSHREPDSHV*LKPSDSDPSNCPPI
Trigger: AATGGGTGGGCAGTTGCTGGGGTCAGAATCGCTGGGCTTTAACCACACATGAGAGTCTGGTTCCCTGTGAGACTGTGAATTCTGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS-3UTR CAA 90 bp CTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTCCAGCATCTCCTCCAGGAGATACTaGAGAGGGACCATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LIRVEEYLPDEAVHASSISSRRY*RGTMPG
Trigger: GCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGA...GATGCTGGAAGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: QHFERPRWADHLRSGVQDRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACACACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: HLQCLLPPPCKVSHKHRTHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...TGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTTTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: PAEAPSRVEECHLQCLLPFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...AGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCAGTTCTAGAATACCCATaGATTGAAAGAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPVLEYP*IERAVA
Trigger: GGCCACAGCTCTTTCAATCAATGGGTATTCTAGAAC...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS GCA 90 bp TTATGTGGGTCCTTTGCAGCCCTGGTGCTGTGCCCATTTTGCAGCTaGAGAATTCACAGTCTCACAGGGAACCAGACTCTCATGTGTGGT +
Preference number: 5 (lower is better)
Translates to: LCGSFAALVLCPFCS*RIHSLTGNQTLMCG
Trigger: ACCACACATGAGAGTCTGGTTCCCTGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS-3UTR CAA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCTGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTTGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCTGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: SCGRMSSPVSAASSLQSLCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...GAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000567554.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTAGGTGGAAATTTGCCTaGGAGAAGTCACGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VSCGRMSSPVSAASSLQSRWKFA*EKSRKV
Trigger: GACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCT...ACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCGCAAGGGGCACTTAGGTGGAAATTTGCCTTGGAGAAGTCACGCAAGGTCCCTTCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: AQGALRWKFALEKSRKVPSTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...AGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: ECHLQCLLPPPCKVSHKHTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...GTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGATTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: VISSVCCLLPAKSPTSTGFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...TCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: QHFERPRWADHLRSGVQDQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: VWKNVISSVCCLLPAKSPQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...GGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: SRVEECHLQCLLPPPCKVHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...GACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCATCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: RMSSPVSAASSLQSLPQASTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...TGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCATCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPSTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCTTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: LVWKNVISSVCCLLPAKSQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...AGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: PVSAASSLQSLPQAQDKGNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...CCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCGTTCTAGAATACCCATaGATTGAAAGAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RVEECHLQCLLPPPCKVSVLEYP*IERAVA
Trigger: GGCCACAGCTCTTTCAATCAATGGGTATTCTAGAAC...GGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp ATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGTTCTAGAATACCCATaGATTGAAAGAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: MSSPVSAASSLQSLPQAQVLEYP*IERAVA
Trigger: GGCCACAGCTCTTTCAATCAATGGGTATTCTAGAAC...CTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CCATGCCCGGCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGTTCAGTGGATTCTaGACTACATATAGGTCATAT +
Preference number: 5 (lower is better)
Translates to: PCPAEAPSRVEECHLQCLLFSGF*TTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAG...CAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGCCGGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCCACTGTTCAGTGGATTCTaGACTACATATAGGTCATAT +
Preference number: 5 (lower is better)
Translates to: CCLLPAKSPTSTGQGVLPLFSGF*TTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAG...TGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCATTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGTTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: EECHLQCLLPPPCKVSHKFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...CTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACAGGACAAGGGGTGCTTCAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: SAASSLQSLPQAQDKGCFNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...GAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CAACCAAGCCAAGAATTAGAAAACTGCTTTGCCCAGGCCCCAGGAGAGGCGCAAGTTCTAGAATACCCATaGATTGAAAGAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: QPSQELENCFAQAPGEAQVLEYP*IERAVA
Trigger: GGCCACAGCTCTTTCAATCAATGGGTATTCTAGAAC...TTGCGCCTCTCCTGGGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp TGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCAGTTCTAGAATACCCATaGATTGAAAGAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CGRMSSPVSAASSLQSLPVLEYP*IERAVA
Trigger: GGCCACAGCTCTTTCAATCAATGGGTATTCTAGAAC...TGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCTGTTCAGTGGATTCTaGACTACATATAGGTCATAT +
Preference number: 5 (lower is better)
Translates to: LKPRLVWKNVISSVCCLLLFSGF*TTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAG...GAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCTGAAGCCCCGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: AEAPSRVEECHLQCLLPPNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...AGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACGGGGCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS TCA 90 bp AATGATTTACTATTAATAACACAAGCATCCTCCACTCGCAAGGCCTaGGACCTGCATCTGCCAGGCATTATGTGGGTCCTTTGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: NDLLLITQASSTRKA*DLHLPGIMWVLCSP
Trigger: AGGGCTGCAAAGGACCCACATAATGCCTGGCAGATGCAGGTCTCAGGCCTTGCGAGTGGAGGATGCTTGTGTTATTAATAGTAAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS-3UTR CAA 90 bp TTATTGGGAGAAAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCATGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: LLGERWLMGGKIWIQESSCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...TGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAACACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CAGCACTTTGAGAGGCCGAGATGGGCAGATCATCTGAGGTCAGGGGTTCAAGACCTGTTCAGTGGATTCTaGACTACATATAGGTCATAT +
Preference number: 5 (lower is better)
Translates to: QHFERPRWADHLRSGVQDLFSGF*TTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAG...GTCTTGAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACCTGTTCAGTGGATTCTaGACTACATATAGGTCATAT +
Preference number: 5 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHLFSGF*TTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAG...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CGTCTCGTGTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: RLVWKNVISSVCCLLPAKNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...CTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCACACGAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GTGGAAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: VEECHLQCLLPPPCKVSHNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...GTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTCCCACTGCAAAGGCACCAAAAGGCAACATCCGTCCAATCCAAAGACCGCCACAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: LPLQRHQKATSVQSKDRHNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...GTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGGAGAAAAGGCCACCTTaGACCCAGCAGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKEKRPP*TQQKAE
Trigger: CTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTC...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCACACTGTTCAGTGGATTCTaGACTACATATAGGTCATAT +
Preference number: 5 (lower is better)
Translates to: NVISSVCCLLPAKSPTSTLFSGF*TTYRSY
Trigger: ATATGACCTATATGTAGTCAAGAATCCACTGAACAG...TGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGAATGTCATCTCCAGTGTCTGCTGCCTCCTCCCTGCAAAGTCTCCCACAAGCAATCAACATGCGTATTaGCTATTCTCAAACAACTCC +
Preference number: 5 (lower is better)
Translates to: KNVISSVCCLLPAKSPTSNQHAY*LFSNNS
Trigger: GGAGTTGTTTGAGAATAGCAAATACGCATGTTGATT...GCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAAAAGTTTGCAATGTCGGCAGCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGTTCTAGAATACCCATaGATTGAAAGAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: KKFAMSAAKCKQSRLWVKVLEYP*IERAVA
Trigger: GGCCACAGCTCTTTCAATCAATGGGTATTCTAGAAC...TTTCACCCAGAGCCGGCTCTGTTTGCACTTTGCTGCCGACATTGCAAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGTGCAGCTTCTCATTCTaGGGTGGGATGGAGCACATT +
Preference number: 5 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKCSFSF*GGMEHI
Trigger: AATGTGCTCCATCCCACCCAAGAATGAGAAGCTGCA...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGGCTGTGAAATGGCTGTaGAGTGATGGTCACACAACC +
Preference number: 5 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKAVKWL*SDGHTT
Trigger: GGTTGTGTGACCATCACTCAACAGCCATTTCACAGC...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTTCAACTTTCTTGACTTaGCCAGGCTGTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: KMADGRQDLDSGILNFSSSTFLT*PGCQDA
Trigger: TGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGA...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTACCCTGCCAAAAAGTTaGCAATGTCGGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: KMADGRQDLDSGILNFSSTLPKS*QCRQQS
Trigger: ACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGT...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp CTAGAATACCCATTGATTGAAAGAGCTGTGGCCAAACAGGAAGGACAGAGTAAGCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: LEYPLIERAVAKQEGQSKQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...CTTACTCTGTCCTTCCTGTTTGGCCACAGCTCTTTCAATCAATGGGTATTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGATGGCTGATGGGAGGCAAGATCTGGATTCAGGAATCCTCAATTTTAGCTCTCAGTTTCCAAAAGGTTaGCTTGCCTCTGTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: KMADGRQDLDSGILNFSSQFPKG*LASVQW
Trigger: CCACTGAACAGAGGCAAGCAAACCTTTTGGAAACTG...AGAGCTAAAATTGAGGATTCCTGAATCCAGATCTTGCCTCCCATCAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp GCAAAGTGCAAACAGAGCCGGCTCTGGGTGAAAGCTTTAGTTATGAAAAATAAGCACTTAGGTGGAAATTaGCCTTGGAGAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: AKCKQSRLWVKALVMKNKHLGGN*PWRSHA
Trigger: TGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTG...CTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTTGCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS-3UTR CAA 90 bp AAGGACAAACTCATCAGAGTTGAGGAGTACCTACCTGATGAAGCTGTTCATGCTTTCCAAAAGGTTTGCTaGCCTCTGTTCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: KDKLIRVEEYLPDEAVHAFQKVC*PLFSGF
Trigger: GAATCCACTGAACAGAGGCAAGCAAACCTTTTGGAA...AGCATGAACAGCTTCATCAGGTAGGTACTCCTCAACTCTGATGAGTTTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 72 bp CCCGCACCGTCGCCGAGAAGGTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCACGTTGCCCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: PAPSPRRSSSGE*AVGLGPRCPAE
Trigger: CTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGACGGTGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562843.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CAA 90 bp GCACCGTCGCCGAGAAGGTCCTCGTCCGGCGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCAGAGGGGATGGTGAGCGCTCACGGC +
Preference number: 6 (lower is better)
Translates to: APSPRRSSSGEWAVG*GPRCPAEGMVSAHG
Trigger: GCCGTGAGCGCTCACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGACGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562843.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS GCA 72 bp TCGTCCGGCGAGTGGGCAGTGGGCTTGGGACCACGTTaGCCCGCAGAGGGGATGGTGAGCGCTCACGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSGEWAVGLGPR*PAEGMVSAHGS
Trigger: GGAGCCGTGAGCGCTCACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562586.1
ENST00000562843.5
ENST00000563815.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000569572.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 72 bp CGTCGCCGAGAAGGTCCTCGTCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCCCCGCAGAGGGGATGG +
Preference number: 6 (lower is better)
Translates to: RRREGPRPASGQ*AWDHVAPQRGW
Trigger: CCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562843.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CAA 72 bp CTCGTCCGGCGAGTGGGCAGTGGGCTTGGGACCACGTaGCCCCGCAGAGGGGATGGTGAGCGCTCACGGCTC +
Preference number: 6 (lower is better)
Translates to: LVRRVGSGLGTT*PRRGDGERSRL
Trigger: GAGCCGTGAGCGCTCACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562586.1
ENST00000562843.5
ENST00000563815.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000569572.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CAA 90 bp AGACTCACGCCGAGAAGGTCCTCGTCCGGCGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCAGAGGGGATGGTGAGCGCTCACGGC +
Preference number: 6 (lower is better)
Translates to: RLTPRRSSSGEWAVG*GPRCPAEGMVSAHG
Trigger: GCCGTGAGCGCTCACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGTGAGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS CCA 72 bp TCACGCCGAGAAGGTCCTCGTCCGGCGAGTGGGCAGTaGGCTTGGGACCACGTTGCCCCGCAGAGGGGATGG +
Preference number: 6 (lower is better)
Translates to: SRREGPRPASGQ*AWDHVAPQRGW
Trigger: CCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS CCA 72 bp TCATCACCGAGGCCACCCAGGGAGTGCAGAGGGCGGTaGGGTCTCCAAGGAGGACCCCGAGCCCAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSPRPPRECRGR*GLQGGPRAQRR
Trigger: CCTCCTCTGGGCTCGGGGTCCTCCTTGGAGACCCCACCGCCCTCTGCACTCCCTGGGTGGCCTCGGTGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567908.5
CDS CAA 72 bp CCGAGAAGGTCCTCGTCCGGCGAGTGGGCAGTGGGCTaGGGACCACGTTGCCCCGCAGAGGGGATGGTGAGC +
Preference number: 6 (lower is better)
Translates to: PRRSSSGEWAVG*GPRCPAEGMVS
Trigger: GCTCACCATCCCCTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562586.1
ENST00000562843.5
ENST00000563815.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000569398.5
ENST00000569572.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS GCA 72 bp GTGCTGCGTCGCAGGGCTCGGACGCTGTGCAGATGGTaGCGCGAAAATGCCAAGCGCACGGCGGGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: VLRRRARTLCRW*RENAKRTAGSV
Trigger: GACTGAGCCCGCCGTGCGCTTGGCATTTTCGCGGCACCATCTGCACAGCGTCCGAGCCCTGCGACGCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568117.5
ENST00000619881.4
CDS GCA 72 bp ACAGGAGCGGTGCTGCGTCGCAGGGCTCGGACGCTGTaGAGATGGTGCCGCGAAAATGCCAAGCGCACGGCG +
Preference number: 6 (lower is better)
Translates to: TGAVLRRRARTL*RWCRENAKRTA
Trigger: CGCCGTGCGCTTGGCATTTTCGCGGCACCATCTGCACAGCGTCCGAGCCCTGCGACGCAGCACCGCTCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568117.5
ENST00000619881.4
CDS CCA 72 bp TCCAGACTCACGCCGAGAAGGTCCTCGTCCGGCGAGTaGGCAGTGGGCTTGGGACCACGTTGCCCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: SRLTPRRSSSGE*AVGLGPRCPAE
Trigger: CTCTGCGGGGCAACGTGGTCCCAAGCCCACTGCCCACTCGCCGGACGAGGACCTTCTCGGCGTGAGTCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS TCA 72 bp GCCCTGGCCAGGACCGCCATGTACAGTCACACAGGCTaGGGACTGCACAACCCTCAACCCTGGGAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: ALARTAMYSHTG*GLHNPQPWEPL
Trigger: GAGCGGCTCCCAGGGTTGAGGGTTGTGCAGTCCTCAGCCTGTGTGACTGTACATGGCGGTCCTGGCCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS GCA 72 bp CAGGCAAGAGATCCATCTGAGAACGCGTCCCCAGCCTaGTCCAGACTCACGCCGAGAAGGTCCTCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: QARDPSENASPA*SRLTPRRSSSG
Trigger: GCCGGACGAGGACCTTCTCGGCGTGAGTCTGGAGCAGGCTGGGGACGCGTTCTCAGATGGATCTCTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS CCA 72 bp ATCCCTGAGCAGCTGTCACAAGCCTGCACCCAGGACTaGGGGGCCTGCTGCGAGAGCCCAAAGGGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: IPEQLSQACTQD*GACCESPKGKG
Trigger: TCCCTTTCCCTTTGGGCTCTCGCAGCAGGCCCCCCAGTCCTGGGTGCAGGCTTGTGACAGCTGCTCAGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567626.1
CDS TCA 72 bp ACGTCGCAGAGAGCTCAAGCGCCACGTTTGGATCCCTaGGCAGCTGTCACAAGCCTGCACCCAGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: TSQRAQAPRLDP*AAVTSLHPGLG
Trigger: CCCCAGTCCTGGGTGCAGGCTTGTGACAGCTGCTCAGGGATCCAAACGTGGCGCTTGAGCTCTCTGCGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000565287.5
ENST00000567626.1
ENST00000569398.5
ENST00000569572.1
ENST00000611932.4
ENST00000614449.4
CDS CCA 72 bp GAGATTTCCCCACCTATTAAGACCCAAGGCCCTGCCTaGAGCGGGACGTCTCCGCCTCCCCCAGCACACACA +
Preference number: 6 (lower is better)
Translates to: EISPPIKTQGPA*SGTSPPPPAHT
Trigger: TGTGTGTGCTGGGGGAGGCGGAGACGTCCCGCTCCAGGCAGGGCCTTGGGTCTTAATAGGTGGGGAAATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396593.6
ENST00000562586.1
ENST00000562843.5
CDS CCA 72 bp GCTGACCCTCACGCAGTGTCCGCCTCCAGGGAACTGTaGAACACGTCGCAGAGAGCTCAAGCGCCACGTTTG +
Preference number: 6 (lower is better)
Translates to: ADPHAVSASREL*NTSQRAQAPRL
Trigger: CAAACGTGGCGCTTGAGCTCTCTGCGACGTGTTCCACAGTTCCCTGGAGGCGGACACTGCGTGAGGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000565287.5
ENST00000569398.5
ENST00000569572.1
ENST00000611932.4
ENST00000614449.4
CDS TCA 72 bp CACAGTGAATCTCTGGCCTCAGGCAAGAGATCCATCTaGGAACGCGTCCCCAGCCTGCTCCAGACTCACGCC +
Preference number: 6 (lower is better)
Translates to: HSESLASGKRSI*ERVPSLLQTHA
Trigger: GGCGTGAGTCTGGAGCAGGCTGGGGACGCGTTCTCAGATGGATCTCTTGCCTGAGGCCAGAGATTCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562586.1
ENST00000563815.5
ENST00000569572.1
CDS CCA 72 bp TGTGGAACACGTCGCAGAGAGCTCAAGCGCCACGTTTaGATCCCTGAGCAGCTGTCACAAGCCTGCACCCAG +
Preference number: 6 (lower is better)
Translates to: CGTRRRELKRHV*IPEQLSQACTQ
Trigger: CTGGGTGCAGGCTTGTGACAGCTGCTCAGGGATCCAAACGTGGCGCTTGAGCTCTCTGCGACGTGTTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000565287.5
ENST00000567626.1
ENST00000569398.5
ENST00000569572.1
ENST00000611932.4
ENST00000614449.4
CDS CCA 72 bp ATGTCGGGGCCGCCATCAGCTGGAGTAATGAAGCCATaGCCCTTGGACCGGCAGAAGCATTTGCAGACTCCT +
Preference number: 6 (lower is better)
Translates to: MSGPPSAGVMKP*PLDRQKHLQTP
Trigger: AGGAGTCTGCAAATGCTTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCCGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562843.5
ENST00000563815.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 72 bp AGAGATGTGCAGGAAGATGTCGGGGCCGCCATCAGCTaGAGTAATGAAGCCATGGCCCTTGGACCGGCAGAA +
Preference number: 6 (lower is better)
Translates to: RDVQEDVGAAIS*SNEAMALGPAE
Trigger: TTCTGCCGGTCCAAGGGCCATGGCTTCATTACTCCAGCTGATGGCGGCCCCGACATCTTCCTGCACATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000562843.5
ENST00000563815.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000568117.5
ENST00000568968.1
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS TCA 72 bp ACCAGACTCTCATGTGTGGTTAAAGCCCAGCGATTCTaGCCCCAGCAACTGCCCACCCATTGCCACTCCCAG +
Preference number: 6 (lower is better)
Translates to: TRLSCVVKAQRF*PQQLPTHCHSQ
Trigger: CTGGGAGTGGCAATGGGTGGGCAGTTGCTGGGGTCAGAATCGCTGGGCTTTAACCACACATGAGAGTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS CAA 72 bp GGAGCCGCTCACAAAGACGCTGGGGGAAAGGACTCTTaGGATGACCCTGGCCAATTTTCTCGGGCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: GAAHKDAGGKDS*DDPGQFSRACF
Trigger: AAAACAGGCCCGAGAAAATTGGCCAGGGTCATCCAAAGAGTCCTTTCCCCCAGCGTCTTTGTGAGCGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS GCA 72 bp TCCTTTGCAGCCCTGGTGCTGTGCCCATTTTGCAGCTaGAGAATTCACAGTCTCACAGGGAACCAGACTCTC +
Preference number: 6 (lower is better)
Translates to: SFAALVLCPFCS*RIHSLTGNQTL
Trigger: GAGAGTCTGGTTCCCTGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS GCA 72 bp TCTGCCAGGCATTATGTGGGTCCTTTGCAGCCCTGGTaGTGTGCCCATTTTGCAGCTGCAGAATTCACAGTC +
Preference number: 6 (lower is better)
Translates to: SARHYVGPLQPW*CAHFAAAEFTV
Trigger: GACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS CCA 72 bp GCATCTGCCAGGCATTATGTGGGTCCTTTGCAGCCCTaGTGCTGTGCCCATTTTGCAGCTGCAGAATTCACA +
Preference number: 6 (lower is better)
Translates to: ASARHYVGPLQP*CCAHFAAAEFT
Trigger: TGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTGGCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS CAA 90 bp CCAGGCATTATGTGGGTCCTTTGCAGCCCTGGTGCTGTGCCCATTTaGCAGCTGCAGAATTCACAGTCTCACAGGGAACCAGACTCTCAT +
Preference number: 6 (lower is better)
Translates to: PGIMWVLCSPGAVPI*QLQNSQSHREPDSH
Trigger: ATGAGAGTCTGGTTCCCTGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS GCA 72 bp CAGGCATTATGTGGGTCCTTTGCAGCCCTGGTGCTGTaGCCATTTTGCAGCTGCAGAATTCACAGTCTCACA +
Preference number: 6 (lower is better)
Translates to: QALCGSFAALVL*PFCSCRIHSLT
Trigger: TGTGAGACTGTGAATTCTGCAGCTGCAAAATGGGCACAGCACCAGGGCTGCAAAGGACCCACATAATGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS TCA 72 bp TCTCATTCTTGGGTGGGATGGAGCACATTTTATAGGTaGCCTCGTCGCCTTCCACTGGGACATACTCCCCTT +
Preference number: 6 (lower is better)
Translates to: SHSWVGWSTFYR*PRRLPLGHTPL
Trigger: AAGGGGAGTATGTCCCAGTGGAAGGCGACGAGGTCACCTATAAAATGTGCTCCATCCCACCCAAGAATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000311052.10
ENST00000396593.6
ENST00000561530.5
ENST00000565287.5
ENST00000567554.5
ENST00000567908.5
ENST00000570125.5
ENST00000610831.4
ENST00000611932.4
ENST00000614449.4
ENST00000618335.4
ENST00000619881.4
CDS CCA 72 bp AATTCACAGTCTCACAGGGAACCAGACTCTCATGTGTaGTTAAAGCCCAGCGATTCTGACCCCAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: NSQSHREPDSHV*LKPSDSDPSNC
Trigger: GCAGTTGCTGGGGTCAGAATCGCTGGGCTTTAACCACACATGAGAGTCTGGTTCCCTGTGAGACTGTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563815.5
CDS TCA 72 bp TTCTCGGGCCTGTTTTCCCTCCTGGAAAGAGGGAGTTaGACTAAAACATCACTGAACATCCCTCCAGAAACT +
Preference number: 6 (lower is better)
Translates to: FSGLFSLLERGS*TKTSLNIPPET
Trigger: AGTTTCTGGAGGGATGTTCAGTGATGTTTTAGTTCAACTCCCTCTTTCCAGGAGGGAAAACAGGCCCGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563815.5