RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARD14 (Homo sapiens)

Ensembl gene IDs: ENSG00000141527

Ensembl transcript IDs: ENST00000344227.6, ENST00000570421.5, ENST00000571427.1, ENST00000571450.1, ENST00000571861.5, ENST00000572838.1, ENST00000573489.5, ENST00000573754.5, ENST00000573882.5, ENST00000574148.5, ENST00000575465.6, ENST00000575500.5, ENST00000575666.1, ENST00000648128.1, ENST00000648509.2, ENST00000649277.1, ENST00000650806.1, ENST00000650867.1, ENST00000651068.1, ENST00000651388.1, ENST00000651672.1, ENST00000652599.1

Found 1901 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: LAASRQPRPAPAASG*APPAPVGSPAPRPG
Trigger: GCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCC +
Preference number: 1 (lower is better)
Translates to: CSRCLSAATARSRSE*MRSTSSCRLPRASS
Trigger: GGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp GGGCGCAAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGC +
Preference number: 1 (lower is better)
Translates to: GRKAIWSAAEPGVTR*MKMPVRFPPMTLIC
Trigger: GCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 90 bp GGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GGSPSSGPRTPLPPG*CPLSGSRPHTPPGS
Trigger: TGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 90 bp CGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCCGCCAGGCTGAAAGTCAGCGAGCGC +
Preference number: 1 (lower is better)
Translates to: RSTSSCRLPRASSRL*SRMSFSARLKVSER
Trigger: GCGCTCGCTGACTTTCAGCCTGGCGGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp CCCCTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTCTCCGAGACATCAAGCCT +
Preference number: 1 (lower is better)
Translates to: PLERQHGDLAQDPAG*PPPHEDAALRDIKP
Trigger: AGGCTTGATGTCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 90 bp ACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCC +
Preference number: 1 (lower is better)
Translates to: TVHHRGLCSVHTTFF*SSAMAWRTQLSRPS
Trigger: GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 90 bp ATCTGCTCCAGCAATGCATCCCCCTGGAACGCCAGCATGGTGACCTaGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCATGAGGACGCCG +
Preference number: 1 (lower is better)
Translates to: ICSSNASPWNASMVT*LRILRAGLRRMRTP
Trigger: CGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp CTCTGCTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCA +
Preference number: 1 (lower is better)
Translates to: LCSVHTTFFCSSAMA*RTQLSRPSRSLQPS
Trigger: TGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAGCAGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 90 bp GGCTCTGCCTGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACCTGCCTGCGGAGGGAGTCCTTCTCC +
Preference number: 1 (lower is better)
Translates to: GSACSWRSCVRSSQT*SVSSNTCLRRESFS
Trigger: GGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 90 bp CGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGCAATGCACCTGCAGCTCCCCTTTGG +
Preference number: 1 (lower is better)
Translates to: RGGHASSRSPGTWCR*RAGPRCNAPAAPLW
Trigger: CCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp TCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: SRRAWVFFSMRDSTA*RVTQQRPPDTSPSW
Trigger: CCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 90 bp GGAGCCCACAGCTGTGCCAAGAGGGCCTGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: GAHSCAKRAWAEEQD*INRHTEAPTVPGRG
Trigger: GCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCCTCTTGGCACAGCTGTGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp AGGTTCCCGCCGATGACGCTGATCTGCTCCAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: RFPPMTLICSSNASP*NASMVTWLRILRAG
Trigger: GCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGGCGGGAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp CAGCGGCCCCCGGACACCTCTCCCTCCTGGATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: QRPPDTSPSWMMSPL*LQASYSSWLKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 90 bp CTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGCTCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: LRRESFSTRLWEISL*ALSLAEYAWSRSFC
Trigger: GCAGAAGGAGCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 90 bp AGGACGCCGCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGAGC +
Preference number: 1 (lower is better)
Translates to: RTPLSETSSLPGETG*RLLSSCGRSAVSRS
Trigger: GCTCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGCGGCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 90 bp TGGAACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTGCCCTCCATGGCCAGGTTGACCCGG +
Preference number: 1 (lower is better)
Translates to: WNMVSVTCRTSLQCT*SSPLALPSMARLTR
Trigger: CCGGGTCAACCTGGCCATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp CAGCCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGCCAGGTTG +
Preference number: 1 (lower is better)
Translates to: QPWNMVSVTCRTSLQ*TCSSPLALPSMARL
Trigger: CAACCTGGCCATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp GTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAATCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: VCAARRPGPSARTPA*GGSPSPPGSGKSPS
Trigger: AGAGGGAGATTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 90 bp AGCTGTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAATCTCC +
Preference number: 1 (lower is better)
Translates to: SCVRSSQTWSVSSNT*LRRESFSTRLWEIS
Trigger: GGAGATTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp GCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGGGCCTaGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCC +
Preference number: 1 (lower is better)
Translates to: AGLMCQGAHSCAKRA*AEEQDCINRHTEAP
Trigger: GGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCCTCTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCT +
Preference number: 1 (lower is better)
Translates to: PWSSWGWCRARQYPS*CKSSRGGHASSRSP
Trigger: AGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp GATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCT +
Preference number: 1 (lower is better)
Translates to: DAREVPADDADLLQQ*IPLERQHGDLAQDP
Trigger: AGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 90 bp GAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCAGAGCCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: EAPRPPPGSCPPGLP*TRALRLRNQPEPLW
Trigger: CCACAGAGGCTCTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR GCA 90 bp TCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: SSPDSWSLAVLRDCS*NSSSQEETMLARCS
Trigger: GCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 90 bp AGCTCCTCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGC +
Preference number: 1 (lower is better)
Translates to: SSSSPDSWSLAVLRD*SCNSSSQEETMLAR
Trigger: GCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 90 bp GAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCATCACAATCTGGG +
Preference number: 1 (lower is better)
Translates to: EAPRPPPGSCPPGLP*TRALRLRNQPSQSG
Trigger: CCCAGATTGTGATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp CGCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGAGCTCATAAT +
Preference number: 1 (lower is better)
Translates to: RSPRHQAFQGRLAAG*FPAAEGLPCLGAHN
Trigger: ATTATGAGCTCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 90 bp TCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGG +
Preference number: 1 (lower is better)
Translates to: SLTETWMTMGKMSIL*RVQTLSSWTSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: AVFQRSPGPPVLGKA*EDVPPVPLQKHSQG
Trigger: ACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp ATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCC +
Preference number: 1 (lower is better)
Translates to: MGKMSILCRVQTLSS*TSRRAWVFFSMRDS
Trigger: GGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 90 bp TGTCAAAGGACAAACGCAGAGGGCTGGCCTTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCTGTGGTCCCCCAGAAGATGGCTTGC +
Preference number: 1 (lower is better)
Translates to: CQRTNAEGWPWLCPY*RCGPASVVPQKMAC
Trigger: GCAAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGTCCTTTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 90 bp GGTCTCTGTAAACTGGAGTTCCTGAGGCATCGCAGCCTCAGAAGCTaGGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: GLCKLEFLRHRSLRS*EKVASVTAYVGFCL
Trigger: GAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTGCGATGCCTCAGGAACTCCAGTTTACAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp TACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTaGAGGAGGCACAGTTTCTCGCTCAGGATCTTCCCAACCGCCCTG +
Preference number: 1 (lower is better)
Translates to: YSSWLKYSARHFLNP*RRHSFSLRIFPTAL
Trigger: CAGGGCGGTTGGGAAGATCCTGAGCGAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp TCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: SGTALAIPAHRRKPC*LAAAPASVDTALGC
Trigger: ACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp ACCCGGTTAGCACATTGTCAATTCGCAAGTTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCATGTCACCGTCCACAGATTCAAAAAG +
Preference number: 1 (lower is better)
Translates to: TRLAHCQFASSQLLQ*SSWAGHVTVHRFKK
Trigger: CTTTTTGAATCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 90 bp TGTTTCCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGTTCAAGGTTAGACCCCAGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: CFHRKVCSYKWLHCV*PARGEGSRLDPSQW
Trigger: CCACTGGCTGGGGTCTAACCTTGAACCCTCACCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 90 bp CTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTaGGGCATCGCAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCA +
Preference number: 1 (lower is better)
Translates to: LYLQVNTLVSVNWSS*GIAASEAEKRWPAS
Trigger: TGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTGCGATGCCTCAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 90 bp ATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAAGTGTGCAGTTACAAGTGGCTTCAC +
Preference number: 1 (lower is better)
Translates to: ILRVSSSDHAKPGKG*RCFHRKVCSYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 90 bp GAACTCATTTATGATGATACCAACCTGAATTCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTCAAAATGACATTCAGTCTGCAACAG +
Preference number: 1 (lower is better)
Translates to: ELIYDDTNLNSRTAS*FLDTAVKMTFSLQQ
Trigger: CTGTTGCAGACTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGAATTCAGGTTGGTATCATCATAAATGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR TCA 90 bp TATACAGAAGTTCTTTTTCTGAACTCATTTATGATGATACCAACCTaGATTCTAGAACAGCTTCCTGATTCTTGGACACTGCTGTCAAAA +
Preference number: 1 (lower is better)
Translates to: YTEVLFLNSFMMIPT*ILEQLPDSWTLLSK
Trigger: TTTTGACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGAATTCAGGTTGGTATCATCATAAATGAGTTCAGAAAAAGAACTTCTGTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 2 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: QRHSICGLLPLPRARVAACPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: HQGIGHQGEAALGPEARASRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: RSLQPSGARLLYRQGARSRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLLVRGY*CQASLG
Trigger: TCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 2 (lower is better)
Translates to: ASQHMWASASAPGKGGSDEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PASQHMWASASAPGKGGSPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CAA 90 bp CAGCCGCAGCCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: QPQPWNMVSVTCRTS*QCTCSSPLALPSMA
Trigger: GGCCATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: MWASASAPGKGGSDLGDHRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 2 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCCTGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: ACSWRSCVRSSQTWSVSSSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTGCCAGGCTTCTCTaGGACACCCCCACCGAACAG +
Preference number: 2 (lower is better)
Translates to: LGCKARSGEGRVRWALYGGARLL*DTPTEQ
Trigger: CTGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: HQGIGHQGEAALGPEARAPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 2 (lower is better)
Translates to: RSLQPSGARLLYRQGARSQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGAGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 2 (lower is better)
Translates to: QGIGHQGEAALGPEARAGDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTGCTCCGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: MRSTSSCRLPRASSRLCSAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...GGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 2 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp ACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: TFFCSSAMAWRTQLSRPSVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: QRHSICGLLPLPRARVAAWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: SICGLLPLPRARVAATLGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGATGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGCTCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: SGKSPSEHCPSRSTPGLAQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...AGCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCATATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 2 (lower is better)
Translates to: LRPHHLLLLVGDGLADTASSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 2 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 2 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTCTGCAATGGTCCAGCTaGGCTGGGCATGTCACCGTC +
Preference number: 2 (lower is better)
Translates to: APSAARTPGPAAHSPSPCLQWSS*AGHVTV
Trigger: GACGGTGACATGCCCAGCCCAGCTGGACCATTGCAG...ACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRSQLLQ*SSWAGH
Trigger: ATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGA...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGGGGCACAGACCCACTaGAAGTACCGTCTCCACCAC +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEGAQTH*KYRLHH
Trigger: GTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 2 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAERAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: PASQHMWASASAPGKGGSHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCACCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGAPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSREGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 2 (lower is better)
Translates to: RSLQPSGARLLYRQGARSRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTGTGGCCAAGAAGGATGGTCCAGCTGGGCTaGGCATGTCACCGTCCACAG +
Preference number: 2 (lower is better)
Translates to: ARCSSCFSRYSPGLWPRRMVQLG*ACHRPQ
Trigger: CTGTGGACGGTGACATGCCCAGCCCAGCTGGACCAT...CCTTCTTGGCCACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp CCAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTAAGGACCTTTCCACCTaGACTCTCCCCTCCCGACAC +
Preference number: 2 (lower is better)
Translates to: PGSGKSPSEHCPSRSTPGKDLST*TLPSRH
Trigger: GTGTCGGGAGGGGAGAGTCCAGGTGGAAAGGTCCTT...ACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CAA 90 bp GGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACGATGCGGACCAGCTTCTGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GSNWPLSKDKRRGLA*ALSILTMRTSFCGP
Trigger: GGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CAA 90 bp CTCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LIPGLLVAGCPQGLL*QFQLTGGNHVGSLQ
Trigger: CTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 2 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGARAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 2 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: SVVPQKMACGSRCTAESCRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: RNRTALTGTQKPPQSREGLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGAEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: SVVPQKMACGSRCTAESCPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 2 (lower is better)
Translates to: SLAPGLILLLAQVLCQALQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 2 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp TCTCGCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCTACAGCCCTGGGCTGTaGCCAAGAAGGACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: SRSFCSSHTWACSAFTFSYSPGL*PRRTFP
Trigger: TGGAAAGGTCCTTCTTGGCCACAGCCCAGGGCTGTA...GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp CTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LAHLGLQRIHLLPVELAGRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GCCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCAACCAGAGCCTCTGTaGGGCCTTCACACCTCTAGT +
Preference number: 2 (lower is better)
Translates to: RSPTASSRVVSSRTALNKQPEPL*GLHTSS
Trigger: ACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR CAA 90 bp GACCTTTCCACCTGGACTCTCCCCTCCCGACACCCGGTTAGCACATaGTCAATTCGCAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: DLSTWTLPSRHPVST*SIRKFPAPAMVQLG
Trigger: GCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGAGAGTCCAGGTGGAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: LGCKARSGEGRVRWALYGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: SICGLLPLPRARVAATLGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: QGADTVQLDVQEGMGVLFACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...GAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 2 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR-3UTR GCA 90 bp CAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 2 (lower is better)
Translates to: QGADTVQLDVQEGMGVLFPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...GAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 2 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: SGASGSREGMGRRPSCPTAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 2 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGAVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
3UTR CAA 90 bp CTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: LRDCSCNSSSQEETM*ARCSSCFSRYSPGL
Trigger: CAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASQHMWASASAPGKGGSDKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: SICGLLPLPRARVAATLGKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: PASQHMWASASAPGKGGSFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGADLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: MWASASAPGKGGSDLGDHNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: APSAARTPGPAAHSPSPCLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...ACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 2 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAG +
Preference number: 2 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSLEQGL*GFVINQ
Trigger: CTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 2 (lower is better)
Translates to: QRHSICGLLPLPRARVAALILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 2 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CAA 90 bp CCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGC +
Preference number: 2 (lower is better)
Translates to: PNRCRPFLSFFAIFS*TETWMTMGKMSILC
Trigger: GCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCATCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTC +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGASRTAS*FLDTAV
Trigger: GACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGA...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGGAGCTGCTCCTCTGAGGTGCCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 2 (lower is better)
Translates to: RSCSSEVPNRCRPFLSFFEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...AAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 2 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTTGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: SLAPGLILLLAQVLCQALNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: TWMTMGKMSILCRVQTLSNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...GGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 2 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLLILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 2 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWLEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651068.1
3UTR-3UTR TCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR GCA 72 bp TCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCT +
Preference number: 3 (lower is better)
Translates to: SRQPRPAPAASG*APPAPVGSPAP
Trigger: AGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp TGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGC +
Preference number: 3 (lower is better)
Translates to: CLSAATARSRSE*MRSTSSCRLPR
Trigger: GCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp CGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTCTCCGAGAC +
Preference number: 3 (lower is better)
Translates to: RQHGDLAQDPAG*PPPHEDAALRD
Trigger: GTCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR CCA 72 bp GCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGGTTCCCGCCGATGACG +
Preference number: 3 (lower is better)
Translates to: AIWSAAEPGVTR*MKMPVRFPPMT
Trigger: CGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp ACCATCACAATCTGGGTGCCCGGGCGCAAGGCCATCTaGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATG +
Preference number: 3 (lower is better)
Translates to: TITIWVPGRKAI*SAAEPGVTRWM
Trigger: CATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp CAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCTCCACCAGCTCCTGTCGGCCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: QPRPAPAASGCAPPAPVGQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...GCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp GGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: GRPGRSSRQEPG*CIDRAPGPGLP
Trigger: AGGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: RSLQPSGARLLYRQGARSPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp GTCCCGGGAAGGGGCACGGTGCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTCTTCTGCTCGTCGGCG +
Preference number: 3 (lower is better)
Translates to: VPGRGTVHHRGL*SVHTTFFCSSA
Trigger: CGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 72 bp CCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCCAGGCCTCATACTCCT +
Preference number: 3 (lower is better)
Translates to: PSSGPRTPLPPG*CPLSGSRPHTP
Trigger: AGGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 72 bp GTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTaGCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCA +
Preference number: 3 (lower is better)
Translates to: VASVTAYVGFCL*PGQGWQRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR GCA 72 bp CTGTCCCTCGCGGAGTACGCCTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCCTGCAGCGCATTCACC +
Preference number: 3 (lower is better)
Translates to: LSLAEYAWSRSF*SSHTWACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAGGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp CGCAGCTCGCAGACCTGGTCCGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: RSSQTWSVSSNT*LRRESFSTRLW
Trigger: CCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTC +
Preference number: 3 (lower is better)
Translates to: VHTTFFCSSAMA*RTQLSRPSRSL
Trigger: GAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 72 bp TGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACCTGCCTGCGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: CSWRSCVRSSQT*SVSSNTCLRRE
Trigger: CTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp TCCTGCTTGAGCACACCCGGAGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGCTCGCAGACCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SCLSTPGGSACS*RSCVRSSQTWS
Trigger: GGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTGCTCAAGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CAA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 3 (lower is better)
Translates to: HQGIGHQGEAALGPEARAPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp AGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCCGCCAGGCTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: SSCRLPRASSRL*SRMSFSARLKV
Trigger: GACTTTCAGCCTGGCGGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp GGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGACACCCCCACCGAACA +
Preference number: 3 (lower is better)
Translates to: GRQSPLGLVRGY*CQASLGHPHRT
Trigger: TGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CCA 72 bp GGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: GCKARSGEGRVR*ALYGGTGARLL
Trigger: GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CCA 72 bp GAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACGTGCAGGACCTCGTTG +
Preference number: 3 (lower is better)
Translates to: EFTRWACQQPQP*NMVSVTCRTSL
Trigger: CAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp GCCAGGTGCTGGCGGACCTGGGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTTTGGCCCAAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: ARCWRTWVLPEP*RWSKDVWPKKG
Trigger: GCCCTTCTTGGGCCAAACATCTTTACTCCACCTTCAGGGCTCGGGGAGGACCCAGGTCCGCCAGCACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR GCA 72 bp GCTCTGAGGCTTCGTAATCAACCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGC +
Preference number: 3 (lower is better)
Translates to: ALRLRNQPSQSG*PGARPSGPPPS
Trigger: GCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGATTACGAAGCCTCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp CAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGCACCTGCAGCTCCCCT +
Preference number: 3 (lower is better)
Translates to: QQPQPWNMVSVT*RTSLQCTCSSP
Trigger: AGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp GCTCGCAGACCTGGTCCGTCAGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: ARRPGPSARTPA*GGSPSPPGSGK
Trigger: TTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp GCACGTGGTGAGGGTTCAAGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACA +
Preference number: 3 (lower is better)
Translates to: ARGEGSRLDPSQ*GEPASCAKEPT
Trigger: TGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGAACCCTCACCACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 72 bp GCCGCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAGCTGCGGAAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: AALRDIKPSRGD*LQAAFQLRKVC
Trigger: GCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR CCA 72 bp GCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCT +
Preference number: 3 (lower is better)
Translates to: AWVFFSMRDSTA*RVTQQRPPDTS
Trigger: AGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CAA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCC +
Preference number: 3 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQRVRWA*YGGTGA
Trigger: GGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CAA 90 bp GGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTGCTCACCCGGTTAGCACATaGTCAATTCGCAAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: GCAPPAPVGSPAPRPGSAHPVST*SIRKFP
Trigger: TGGGAACTTGCGAATTGACAATGTGCTAACCGGGTG...AGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CAA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 3 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 72 bp CATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGCAATGCACCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: HASSRSPGTWCR*RAGPRCNAPAA
Trigger: AGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp GAGTCCTTCTCCACCAGGCTCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: ESFSTRLWEISL*ALSLAEYAWSR
Trigger: GCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGGAGAAGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp CTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTG +
Preference number: 3 (lower is better)
Translates to: LSETSSLPGETG*RLLSSCGRSAV
Trigger: CACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR CCA 72 bp GGCGGTTCAGCTCCTCATCCCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCTCTTGCAATTCCAGCT +
Preference number: 3 (lower is better)
Translates to: GGSAPHPRTPGR*LSSGTALAIPA
Trigger: AGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAGGAGCTGAACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CAA 90 bp TCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: SCAGCRHCPAGRPGGHGCAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...ACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 72 bp CCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGGGCTATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PPEDGLRVTVHC*VMSWMRAMSCC
Trigger: GCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp AGCTGTGCCAAGAGGGCCTGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAAGCCCCCACAGTCCCG +
Preference number: 3 (lower is better)
Translates to: SCAKRAWAEEQD*INRHTEAPTVP
Trigger: CGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCCTCTTGGCACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR GCA 72 bp AAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCCTGGAACGCCAGCATG +
Preference number: 3 (lower is better)
Translates to: KMPVRFPPMTLI*SSNASPWNASM
Trigger: CATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp AACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATG +
Preference number: 3 (lower is better)
Translates to: NMVSVTCRTSLQ*TCSSPLALPSM
Trigger: CATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp AGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: SWGWCRARQYPS*CKSSRGGHASS
Trigger: GCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp GGTCGTGTCCTCCAGGACTGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAGAGCCTCTGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GRVLQDCLEQGL*GFVINQSLCGA
Trigger: GGCCCCACAGAGGCTCTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR TCA 72 bp CGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCAGAG +
Preference number: 3 (lower is better)
Translates to: RPPPGSCPPGLP*TRALRLRNQPE
Trigger: CTCTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR GCA 72 bp AGACATCAAGCCTTCCAGGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGA +
Preference number: 3 (lower is better)
Translates to: RHQAFQGRLAAG*FPAAEGLPCLG
Trigger: TCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 72 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCCAGCTGGACGTCCAGG +
Preference number: 3 (lower is better)
Translates to: ETWMTMGKMSIL*RVQTLSSWTSR
Trigger: CCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 72 bp TCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCACAGGAGGAAACCATG +
Preference number: 3 (lower is better)
Translates to: SPDSWSLAVLRD*SCNSSSQEETM
Trigger: CATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp CAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTCCCACTGCAGAAACAT +
Preference number: 3 (lower is better)
Translates to: QRSPGPPVLGKA*EDVPPVPLQKH
Trigger: ATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 72 bp GGCTTTGTCCATACTGACGATGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCA +
Preference number: 3 (lower is better)
Translates to: GFVHTDDADQLL*SPRRWLAGHGA
Trigger: TGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: SLAPGLILLLAQVLCQALAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
3UTR TCA 72 bp CGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCATCA +
Preference number: 3 (lower is better)
Translates to: RPPPGSCPPGLP*TRALRLRNQPS
Trigger: TGATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp ACAAACGCAGAGGGCTGGCCTTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCTGTGGTCCCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: TNAEGWPWLCPY*RCGPASVVPQK
Trigger: CTTCTGGGGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp TCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCCCTGGGCTGTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: SQEETMLARCSS*FSRYSPGLWPR
Trigger: TCTTGGCCACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp GACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAGGAAACCATGTTGGCT +
Preference number: 3 (lower is better)
Translates to: DSWSLAVLRDCS*NSSSQEETMLA
Trigger: AGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp ATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATG +
Preference number: 3 (lower is better)
Translates to: MSILCRVQTLSS*TSRRAWVFFSM
Trigger: CATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 72 bp GCACATTGTCAATTCGCAAGTTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCATGTCACCGTCCACAGA +
Preference number: 3 (lower is better)
Translates to: AHCQFASSQLLQ*SSWAGHVTVHR
Trigger: TCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 72 bp GGTCGTGTCCTCCAGGACTGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCATCACAATCTGGGTGCC +
Preference number: 3 (lower is better)
Translates to: GRVLQDCLEQGL*GFVINHHNLGA
Trigger: GGCACCCAGATTGTGATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp ATGTCCCCTCTCTGGCTCCAGGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCT +
Preference number: 3 (lower is better)
Translates to: MSPLWLQASYSS*LKYSARHFLNP
Trigger: AGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGAGGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp GCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCC +
Preference number: 3 (lower is better)
Translates to: ALAIPAHRRKPC*LAAAPASVDTA
Trigger: GGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 72 bp GAACAGCTTCCTGATTCTTGGACACTGCTGTCAAAATaGCATTCAGTCTGCAACAGCCCCAGGAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: EQLPDSWTLLSK*HSVCNSPRRQG
Trigger: CCCCTGCCTCCTGGGGCTGTTGCAGACTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAGGAAGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CCA 72 bp CGCAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTaGGCATGTCACCGTCCACAGATTCAAAAAGTAAAA +
Preference number: 3 (lower is better)
Translates to: RKFPAPAMVQLG*ACHRPQIQKVK
Trigger: TTTTACTTTTTGAATCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 72 bp AGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGTTCAAGGTTAGACCCC +
Preference number: 3 (lower is better)
Translates to: RKVCSYKWLHCV*PARGEGSRLDP
Trigger: GGGGTCTAACCTTGAACCCTCACCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 72 bp TTGAGCTTCTTTGCCATCTTCTCGTTGACAGAGACGTaGATGACGATGGGGAAGATGTCCATCCTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: LSFFAIFSLTET*MTMGKMSILCR
Trigger: CCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAGAAGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 72 bp GTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAAGTGTGCAGTTACAAG +
Preference number: 3 (lower is better)
Translates to: VSSSDHAKPGKG*RCFHRKVCSYK
Trigger: CTTGTAACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CSRCLSAATARSRSEWMRAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...GCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CSRCLSAATARSRSEWMRRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATGAAGATGCCCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: KAIWSAAEPGVTRWMKMPRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HSMAGHPAAAPGHLSLLDPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...ATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HSMAGHPAAAPGHLSLLDAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...ATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCARSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AATCTGGGTGCCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: NLGARAQGHLVRRRARGDGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...GTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCATGAGGTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ASMVTWLRILRAGLRRMRFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...CCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: VHAVGMPAAAALEHGVGDPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...GTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AATCTGGGTGCCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: NLGARAQGHLVRRRARGDPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...GTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: PSRSLQPSGARLLYRQGACPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCCCCATGGCTGGGCGCTaGGAGGACCGCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TFFCSSAMAWRTQLSRPSPMAGR*EDRSCG
Trigger: CCCACAGGAGCGGTCCTCCCAGCGCCCAGCCATGGG...GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650867.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp ACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTAGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TAEQAVQVAPAVRSQAAVAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...TACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAASRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCATGAGGTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASMVTWLRILRAGLRRMRWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...CCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTTCTCTTCCCAGTACTGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLFPVLLSLPLGSHGPLPPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...CGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTGGGAAGAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TFFCSSAMAWRTQLSRPSFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSRSLQPSGARLLYRQGAPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGATGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCARTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: LERQHGDLAQDPAGWPPPRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCAGGGGAGACTGGCTGCAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTGTCAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGDWLQAAFQLRKVCRVSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...GACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR TCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTAVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGIGHQGEAALGPEARAGRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: QALGNLPLSTVPRGVRLVRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTGGAGCCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVWSPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGCTCCA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTGGAGCCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAWSPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGCTCCA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCCATGGCTGGGCGCTaGGAGGACCCAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPMAGR*EDPRFS
Trigger: TGAGAACCTTGGGTCCTCCCAGCGCCCAGCCATGGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: HSMAGHPAAAPGHLSLLDSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...ATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: VFFSMRDSTAWRVTQQRPPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...GGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRATGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVARDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVASSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp TCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACACTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SWCKSSRGGHASSRSPGTLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...TGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR TCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRALASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCTCCACCAGCTCCTGTCGGCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QPRPAPAASGCAPPAPVGLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...GCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVALVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSRSLQPSGARLLYRQGARAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCCGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000650867.1
CDS-3UTR CCA 90 bp GTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VFFSMRDSTAWRVTQQRPLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...GGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SCAGCRHCPAGRPGGHGCAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...ACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVALAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGCCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGCT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCCAGAAGCACGTGCTaGAGCCCTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPRSTC*SPPSCW
Trigger: CCAGCAGGATGGAGGGCTCCAGCACGTGCTTCTGGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCCCAGAAGCACGTGCTaGAGCCCTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSPRSTC*SPPSCW
Trigger: CCAGCAGGATGGAGGGCTCCAGCACGTGCTTCTGGG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTGCTTACAGCCCTGGGCTGTaGCCAAGAAGGACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCAPPAPVGSPAPRPGSAYSPGL*PRRTFP
Trigger: TGGAAAGGTCCTTCTTGGCCACAGCCCAGGGCTGTA...AGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAASAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGATGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571450.1
ENST00000575500.5
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCTATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCTCCGTAGGCTaGGCCCTCCGTAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRSPSVG*ALRRLT
Trigger: GGTCAGCCTACGGAGGGCTCAGCCTACGGAGGGGCT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCTGGCCTCCGCCGCATaGGGACGCCGCTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQLASAA*GRRCCL
Trigger: TAAGCAGCAGCGGCGTCCTCATGCGGCGGAGGCCAG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SWCKSSRGGHASSRSPGTVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTGGGCATGTCACCGTCCACAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVPSSCNGPAGLGMSPSTRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGARPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGCTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: SGKSPSEHCPSRSTPGLASASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...AGCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGATCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAAAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTTCTCTTCCCAGTACTGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLFPVLLSLPLGSHGPLPASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTGGGAAGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LAHLGLQRIHLLPVELAGPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GCCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QALGNLPLSTVPRGVRLVHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...GACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGACCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGIGHQGEAALGPEARAGPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: SVVPQKMACGSRCTAESCPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCTGGGAAGTGGAGGTTaGAGAGAGCTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCALGSGG*RELRWC
Trigger: GCACCATCTCAGCTCTCTGCAACCTCCACTTCCCAG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp TGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: CAGCRHCPAGRPGGHGCSRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...AGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCGGCCCAGAAGCACGTaGTGGAGCCTGTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTRPRST*WSLWRR
Trigger: TCTCCTCCACAGGCTCCAGCACGTGCTTCTGGGCCG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QGIGHQGEAALGPEARAGRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTCGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTARFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAGCCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGCT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCCCAGAAGCACGTGCTaGAGCCCTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTPRSTC*SPPSCW
Trigger: CCAGCAGGATGGAGGGCTCCAGCACGTGCTTCTGGG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATGGCCCAAGAAGGGCTaGGGTGCAAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAWPKKG*GAKPGQ
Trigger: CTGACCTGGCTTTGCACCCCAGCCCTTCTTGGGCCA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTGGGTGGGACGGAGCTaGGCAGAAGGAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKWVGRS*AEGRAC
Trigger: ACAGGCTCTTCCTTCTGCCCAGCTCCGTCCCACCCA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCCAGAAGCACGTGCTaGAGCCTGTGGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGPRSTC*SLWRRG
Trigger: TCCTCTCCTCCACAGGCTCCAGCACGTGCTTCTGGG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651672.1
3UTR CAA 72 bp AAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCCAGGCTTCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KARSGEGRVRWA*YGGTGARLLWD
Trigger: GTCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CAA 72 bp CCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PWNMVSVTCRTS*QCTCSSPLALP
Trigger: GGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCACCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTAWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTAAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: TAEQAVQVAPAVRSQAAVRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...TACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651388.1
CDS-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGASRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: DVDDDGEDVHPVQGADTVPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...GACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGAGCCCTCCGTAGGCTaGCCTGCTCTTCGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLREPSVG*PALRRM
Trigger: CATCCGGCGAAGAGCAGGTCAGCCTACGGAGGGCTC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRALGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVADLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTAGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: TAEQAVQVAPAVRSQAAVDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...TACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGARGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGCGGTGGCTCACGCCTaGAATCCAGCACTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDAVAHA*NPALSE
Trigger: CTCTGAAAGTGCTGGATTGCAGGCGTGAGCCACCGC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVATILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: VQLDVQEGMGVLFHEGLHAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...GTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCTCGCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SRSFCSSHTWACSAFTFSRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAATGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTGCAATTCCAGCTCACGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTPGRWLSSGTALAIPAHGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...GTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882