RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARD14 (Homo sapiens)

Ensembl gene IDs: ENSG00000141527

Ensembl transcript IDs: ENST00000344227.6, ENST00000570421.5, ENST00000571427.1, ENST00000571450.1, ENST00000571861.5, ENST00000572838.1, ENST00000573489.5, ENST00000573754.5, ENST00000573882.5, ENST00000574148.5, ENST00000575465.6, ENST00000575500.5, ENST00000575666.1, ENST00000648128.1, ENST00000648509.2, ENST00000649277.1, ENST00000650806.1, ENST00000650867.1, ENST00000651068.1, ENST00000651388.1, ENST00000651672.1, ENST00000652599.1

Found 1901 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: LAASRQPRPAPAASG*APPAPVGSPAPRPG
Trigger: GCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCC +
Preference number: 1 (lower is better)
Translates to: CSRCLSAATARSRSE*MRSTSSCRLPRASS
Trigger: GGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp GGGCGCAAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGC +
Preference number: 1 (lower is better)
Translates to: GRKAIWSAAEPGVTR*MKMPVRFPPMTLIC
Trigger: GCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 90 bp GGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GGSPSSGPRTPLPPG*CPLSGSRPHTPPGS
Trigger: TGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 90 bp CGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCCGCCAGGCTGAAAGTCAGCGAGCGC +
Preference number: 1 (lower is better)
Translates to: RSTSSCRLPRASSRL*SRMSFSARLKVSER
Trigger: GCGCTCGCTGACTTTCAGCCTGGCGGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp CCCCTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTCTCCGAGACATCAAGCCT +
Preference number: 1 (lower is better)
Translates to: PLERQHGDLAQDPAG*PPPHEDAALRDIKP
Trigger: AGGCTTGATGTCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 90 bp ACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCC +
Preference number: 1 (lower is better)
Translates to: TVHHRGLCSVHTTFF*SSAMAWRTQLSRPS
Trigger: GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 90 bp ATCTGCTCCAGCAATGCATCCCCCTGGAACGCCAGCATGGTGACCTaGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCATGAGGACGCCG +
Preference number: 1 (lower is better)
Translates to: ICSSNASPWNASMVT*LRILRAGLRRMRTP
Trigger: CGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp CTCTGCTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCA +
Preference number: 1 (lower is better)
Translates to: LCSVHTTFFCSSAMA*RTQLSRPSRSLQPS
Trigger: TGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAGCAGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 90 bp GGCTCTGCCTGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACCTGCCTGCGGAGGGAGTCCTTCTCC +
Preference number: 1 (lower is better)
Translates to: GSACSWRSCVRSSQT*SVSSNTCLRRESFS
Trigger: GGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 90 bp CGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGCAATGCACCTGCAGCTCCCCTTTGG +
Preference number: 1 (lower is better)
Translates to: RGGHASSRSPGTWCR*RAGPRCNAPAAPLW
Trigger: CCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp TCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: SRRAWVFFSMRDSTA*RVTQQRPPDTSPSW
Trigger: CCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 90 bp GGAGCCCACAGCTGTGCCAAGAGGGCCTGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: GAHSCAKRAWAEEQD*INRHTEAPTVPGRG
Trigger: GCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCCTCTTGGCACAGCTGTGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp AGGTTCCCGCCGATGACGCTGATCTGCTCCAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: RFPPMTLICSSNASP*NASMVTWLRILRAG
Trigger: GCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGGCGGGAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp CAGCGGCCCCCGGACACCTCTCCCTCCTGGATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: QRPPDTSPSWMMSPL*LQASYSSWLKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 90 bp CTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGCTCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: LRRESFSTRLWEISL*ALSLAEYAWSRSFC
Trigger: GCAGAAGGAGCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 90 bp AGGACGCCGCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGAGC +
Preference number: 1 (lower is better)
Translates to: RTPLSETSSLPGETG*RLLSSCGRSAVSRS
Trigger: GCTCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGCGGCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 90 bp TGGAACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTGCCCTCCATGGCCAGGTTGACCCGG +
Preference number: 1 (lower is better)
Translates to: WNMVSVTCRTSLQCT*SSPLALPSMARLTR
Trigger: CCGGGTCAACCTGGCCATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp CAGCCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGCCAGGTTG +
Preference number: 1 (lower is better)
Translates to: QPWNMVSVTCRTSLQ*TCSSPLALPSMARL
Trigger: CAACCTGGCCATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp GTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAATCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: VCAARRPGPSARTPA*GGSPSPPGSGKSPS
Trigger: AGAGGGAGATTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 90 bp AGCTGTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAATCTCC +
Preference number: 1 (lower is better)
Translates to: SCVRSSQTWSVSSNT*LRRESFSTRLWEIS
Trigger: GGAGATTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp GCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGGGCCTaGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCC +
Preference number: 1 (lower is better)
Translates to: AGLMCQGAHSCAKRA*AEEQDCINRHTEAP
Trigger: GGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCCTCTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCT +
Preference number: 1 (lower is better)
Translates to: PWSSWGWCRARQYPS*CKSSRGGHASSRSP
Trigger: AGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp GATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCT +
Preference number: 1 (lower is better)
Translates to: DAREVPADDADLLQQ*IPLERQHGDLAQDP
Trigger: AGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 90 bp GAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCAGAGCCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: EAPRPPPGSCPPGLP*TRALRLRNQPEPLW
Trigger: CCACAGAGGCTCTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR GCA 90 bp TCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: SSPDSWSLAVLRDCS*NSSSQEETMLARCS
Trigger: GCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 90 bp AGCTCCTCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGC +
Preference number: 1 (lower is better)
Translates to: SSSSPDSWSLAVLRD*SCNSSSQEETMLAR
Trigger: GCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 90 bp GAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCATCACAATCTGGG +
Preference number: 1 (lower is better)
Translates to: EAPRPPPGSCPPGLP*TRALRLRNQPSQSG
Trigger: CCCAGATTGTGATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 90 bp CGCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGAGCTCATAAT +
Preference number: 1 (lower is better)
Translates to: RSPRHQAFQGRLAAG*FPAAEGLPCLGAHN
Trigger: ATTATGAGCTCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 90 bp TCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGG +
Preference number: 1 (lower is better)
Translates to: SLTETWMTMGKMSIL*RVQTLSSWTSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: AVFQRSPGPPVLGKA*EDVPPVPLQKHSQG
Trigger: ACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp ATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCC +
Preference number: 1 (lower is better)
Translates to: MGKMSILCRVQTLSS*TSRRAWVFFSMRDS
Trigger: GGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 90 bp TGTCAAAGGACAAACGCAGAGGGCTGGCCTTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCTGTGGTCCCCCAGAAGATGGCTTGC +
Preference number: 1 (lower is better)
Translates to: CQRTNAEGWPWLCPY*RCGPASVVPQKMAC
Trigger: GCAAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGTCCTTTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 90 bp GGTCTCTGTAAACTGGAGTTCCTGAGGCATCGCAGCCTCAGAAGCTaGGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: GLCKLEFLRHRSLRS*EKVASVTAYVGFCL
Trigger: GAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTGCGATGCCTCAGGAACTCCAGTTTACAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 90 bp TACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTaGAGGAGGCACAGTTTCTCGCTCAGGATCTTCCCAACCGCCCTG +
Preference number: 1 (lower is better)
Translates to: YSSWLKYSARHFLNP*RRHSFSLRIFPTAL
Trigger: CAGGGCGGTTGGGAAGATCCTGAGCGAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 90 bp TCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: SGTALAIPAHRRKPC*LAAAPASVDTALGC
Trigger: ACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 90 bp ACCCGGTTAGCACATTGTCAATTCGCAAGTTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCATGTCACCGTCCACAGATTCAAAAAG +
Preference number: 1 (lower is better)
Translates to: TRLAHCQFASSQLLQ*SSWAGHVTVHRFKK
Trigger: CTTTTTGAATCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 90 bp TGTTTCCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGTTCAAGGTTAGACCCCAGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: CFHRKVCSYKWLHCV*PARGEGSRLDPSQW
Trigger: CCACTGGCTGGGGTCTAACCTTGAACCCTCACCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 90 bp CTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTaGGGCATCGCAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCA +
Preference number: 1 (lower is better)
Translates to: LYLQVNTLVSVNWSS*GIAASEAEKRWPAS
Trigger: TGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTGCGATGCCTCAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 90 bp ATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAAGTGTGCAGTTACAAGTGGCTTCAC +
Preference number: 1 (lower is better)
Translates to: ILRVSSSDHAKPGKG*RCFHRKVCSYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 90 bp GAACTCATTTATGATGATACCAACCTGAATTCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTCAAAATGACATTCAGTCTGCAACAG +
Preference number: 1 (lower is better)
Translates to: ELIYDDTNLNSRTAS*FLDTAVKMTFSLQQ
Trigger: CTGTTGCAGACTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGAATTCAGGTTGGTATCATCATAAATGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR TCA 90 bp TATACAGAAGTTCTTTTTCTGAACTCATTTATGATGATACCAACCTaGATTCTAGAACAGCTTCCTGATTCTTGGACACTGCTGTCAAAA +
Preference number: 1 (lower is better)
Translates to: YTEVLFLNSFMMIPT*ILEQLPDSWTLLSK
Trigger: TTTTGACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGAATTCAGGTTGGTATCATCATAAATGAGTTCAGAAAAAGAACTTCTGTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 2 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: QRHSICGLLPLPRARVAACPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: HQGIGHQGEAALGPEARASRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: RSLQPSGARLLYRQGARSRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLLVRGY*CQASLG
Trigger: TCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 2 (lower is better)
Translates to: ASQHMWASASAPGKGGSDEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PASQHMWASASAPGKGGSPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CAA 90 bp CAGCCGCAGCCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: QPQPWNMVSVTCRTS*QCTCSSPLALPSMA
Trigger: GGCCATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: MWASASAPGKGGSDLGDHRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 2 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCCTGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: ACSWRSCVRSSQTWSVSSSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTGCCAGGCTTCTCTaGGACACCCCCACCGAACAG +
Preference number: 2 (lower is better)
Translates to: LGCKARSGEGRVRWALYGGARLL*DTPTEQ
Trigger: CTGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: HQGIGHQGEAALGPEARAPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 2 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 2 (lower is better)
Translates to: RSLQPSGARLLYRQGARSQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGAGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 2 (lower is better)
Translates to: QGIGHQGEAALGPEARAGDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTGCTCCGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: MRSTSSCRLPRASSRLCSAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...GGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 2 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp ACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: TFFCSSAMAWRTQLSRPSVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: QRHSICGLLPLPRARVAAWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: SICGLLPLPRARVAATLGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGATGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGCTCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: SGKSPSEHCPSRSTPGLAQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...AGCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCATATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: RARVAATLGTTQAPHPLPFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 2 (lower is better)
Translates to: LRPHHLLLLVGDGLADTASSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 2 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 2 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTCTGCAATGGTCCAGCTaGGCTGGGCATGTCACCGTC +
Preference number: 2 (lower is better)
Translates to: APSAARTPGPAAHSPSPCLQWSS*AGHVTV
Trigger: GACGGTGACATGCCCAGCCCAGCTGGACCATTGCAG...ACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRSQLLQ*SSWAGH
Trigger: ATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGA...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGGGGCACAGACCCACTaGAAGTACCGTCTCCACCAC +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEGAQTH*KYRLHH
Trigger: GTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 2 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAERAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: PASQHMWASASAPGKGGSHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCACCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGAPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSREGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 2 (lower is better)
Translates to: RSLQPSGARLLYRQGARSRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp GCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTGTGGCCAAGAAGGATGGTCCAGCTGGGCTaGGCATGTCACCGTCCACAG +
Preference number: 2 (lower is better)
Translates to: ARCSSCFSRYSPGLWPRRMVQLG*ACHRPQ
Trigger: CTGTGGACGGTGACATGCCCAGCCCAGCTGGACCAT...CCTTCTTGGCCACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp CCAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTAAGGACCTTTCCACCTaGACTCTCCCCTCCCGACAC +
Preference number: 2 (lower is better)
Translates to: PGSGKSPSEHCPSRSTPGKDLST*TLPSRH
Trigger: GTGTCGGGAGGGGAGAGTCCAGGTGGAAAGGTCCTT...ACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CAA 90 bp GGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACGATGCGGACCAGCTTCTGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GSNWPLSKDKRRGLA*ALSILTMRTSFCGP
Trigger: GGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CAA 90 bp CTCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LIPGLLVAGCPQGLL*QFQLTGGNHVGSLQ
Trigger: CTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 2 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGARAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 2 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: SVVPQKMACGSRCTAESCRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: RNRTALTGTQKPPQSREGLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 2 (lower is better)
Translates to: GQRHSICGLLPLPRARVAEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGAEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: SVVPQKMACGSRCTAESCPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 2 (lower is better)
Translates to: SLAPGLILLLAQVLCQALQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 2 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp TCTCGCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCTACAGCCCTGGGCTGTaGCCAAGAAGGACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: SRSFCSSHTWACSAFTFSYSPGL*PRRTFP
Trigger: TGGAAAGGTCCTTCTTGGCCACAGCCCAGGGCTGTA...GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp CTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LAHLGLQRIHLLPVELAGRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GCCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCAACCAGAGCCTCTGTaGGGCCTTCACACCTCTAGT +
Preference number: 2 (lower is better)
Translates to: RSPTASSRVVSSRTALNKQPEPL*GLHTSS
Trigger: ACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR CAA 90 bp GACCTTTCCACCTGGACTCTCCCCTCCCGACACCCGGTTAGCACATaGTCAATTCGCAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: DLSTWTLPSRHPVST*SIRKFPAPAMVQLG
Trigger: GCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGAGAGTCCAGGTGGAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: LGCKARSGEGRVRWALYGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: SICGLLPLPRARVAATLGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: QGADTVQLDVQEGMGVLFACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...GAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 2 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR-3UTR GCA 90 bp CAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 2 (lower is better)
Translates to: QGADTVQLDVQEGMGVLFPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...GAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 2 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: SGASGSREGMGRRPSCPTAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 2 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 2 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGAVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
3UTR CAA 90 bp CTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: LRDCSCNSSSQEETM*ARCSSCFSRYSPGL
Trigger: CAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASQHMWASASAPGKGGSDKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: SICGLLPLPRARVAATLGKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: PASQHMWASASAPGKGGSFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGADLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: MWASASAPGKGGSDLGDHNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: APSAARTPGPAAHSPSPCLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...ACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 2 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAG +
Preference number: 2 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSLEQGL*GFVINQ
Trigger: CTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 2 (lower is better)
Translates to: QRHSICGLLPLPRARVAALILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 2 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CAA 90 bp CCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGC +
Preference number: 2 (lower is better)
Translates to: PNRCRPFLSFFAIFS*TETWMTMGKMSILC
Trigger: GCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCATCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTC +
Preference number: 2 (lower is better)
Translates to: NRTALTGTQKPPQSREGASRTAS*FLDTAV
Trigger: GACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGA...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CCA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 2 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CCA 90 bp AGGAGCTGCTCCTCTGAGGTGCCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 2 (lower is better)
Translates to: RSCSSEVPNRCRPFLSFFEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...AAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR TCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR TCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 2 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTTGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 2 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: SLAPGLILLLAQVLCQALNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp ACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: TWMTMGKMSILCRVQTLSNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...GGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 2 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLLILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR GCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 2 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR TCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 2 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWLEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651068.1
3UTR-3UTR TCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR GCA 72 bp TCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCT +
Preference number: 3 (lower is better)
Translates to: SRQPRPAPAASG*APPAPVGSPAP
Trigger: AGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp TGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGC +
Preference number: 3 (lower is better)
Translates to: CLSAATARSRSE*MRSTSSCRLPR
Trigger: GCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp CGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTCTCCGAGAC +
Preference number: 3 (lower is better)
Translates to: RQHGDLAQDPAG*PPPHEDAALRD
Trigger: GTCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR CCA 72 bp GCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGGTTCCCGCCGATGACG +
Preference number: 3 (lower is better)
Translates to: AIWSAAEPGVTR*MKMPVRFPPMT
Trigger: CGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp ACCATCACAATCTGGGTGCCCGGGCGCAAGGCCATCTaGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATG +
Preference number: 3 (lower is better)
Translates to: TITIWVPGRKAI*SAAEPGVTRWM
Trigger: CATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp CAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCTCCACCAGCTCCTGTCGGCCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: QPRPAPAASGCAPPAPVGQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...GCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp GGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: GRPGRSSRQEPG*CIDRAPGPGLP
Trigger: AGGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: RSLQPSGARLLYRQGARSPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp GTCCCGGGAAGGGGCACGGTGCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTCTTCTGCTCGTCGGCG +
Preference number: 3 (lower is better)
Translates to: VPGRGTVHHRGL*SVHTTFFCSSA
Trigger: CGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 72 bp CCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCCAGGCCTCATACTCCT +
Preference number: 3 (lower is better)
Translates to: PSSGPRTPLPPG*CPLSGSRPHTP
Trigger: AGGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 72 bp GTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTaGCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCA +
Preference number: 3 (lower is better)
Translates to: VASVTAYVGFCL*PGQGWQRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR GCA 72 bp CTGTCCCTCGCGGAGTACGCCTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCCTGCAGCGCATTCACC +
Preference number: 3 (lower is better)
Translates to: LSLAEYAWSRSF*SSHTWACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAGGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp CGCAGCTCGCAGACCTGGTCCGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: RSSQTWSVSSNT*LRRESFSTRLW
Trigger: CCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTC +
Preference number: 3 (lower is better)
Translates to: VHTTFFCSSAMA*RTQLSRPSRSL
Trigger: GAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 72 bp TGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACCTGCCTGCGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: CSWRSCVRSSQT*SVSSNTCLRRE
Trigger: CTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp TCCTGCTTGAGCACACCCGGAGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGCTCGCAGACCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SCLSTPGGSACS*RSCVRSSQTWS
Trigger: GGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTGCTCAAGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CAA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 3 (lower is better)
Translates to: HQGIGHQGEAALGPEARAPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp AGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCCGCCAGGCTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: SSCRLPRASSRL*SRMSFSARLKV
Trigger: GACTTTCAGCCTGGCGGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp GGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGACACCCCCACCGAACA +
Preference number: 3 (lower is better)
Translates to: GRQSPLGLVRGY*CQASLGHPHRT
Trigger: TGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CCA 72 bp GGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: GCKARSGEGRVR*ALYGGTGARLL
Trigger: GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CCA 72 bp GAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACGTGCAGGACCTCGTTG +
Preference number: 3 (lower is better)
Translates to: EFTRWACQQPQP*NMVSVTCRTSL
Trigger: CAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp GCCAGGTGCTGGCGGACCTGGGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTTTGGCCCAAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: ARCWRTWVLPEP*RWSKDVWPKKG
Trigger: GCCCTTCTTGGGCCAAACATCTTTACTCCACCTTCAGGGCTCGGGGAGGACCCAGGTCCGCCAGCACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR GCA 72 bp GCTCTGAGGCTTCGTAATCAACCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGC +
Preference number: 3 (lower is better)
Translates to: ALRLRNQPSQSG*PGARPSGPPPS
Trigger: GCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGATTACGAAGCCTCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp CAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGCACCTGCAGCTCCCCT +
Preference number: 3 (lower is better)
Translates to: QQPQPWNMVSVT*RTSLQCTCSSP
Trigger: AGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp GCTCGCAGACCTGGTCCGTCAGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: ARRPGPSARTPA*GGSPSPPGSGK
Trigger: TTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp GCACGTGGTGAGGGTTCAAGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACA +
Preference number: 3 (lower is better)
Translates to: ARGEGSRLDPSQ*GEPASCAKEPT
Trigger: TGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGAACCCTCACCACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 72 bp GCCGCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAGCTGCGGAAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: AALRDIKPSRGD*LQAAFQLRKVC
Trigger: GCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR CCA 72 bp GCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCT +
Preference number: 3 (lower is better)
Translates to: AWVFFSMRDSTA*RVTQQRPPDTS
Trigger: AGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR-3UTR CAA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCC +
Preference number: 3 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQRVRWA*YGGTGA
Trigger: GGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR-3UTR CAA 90 bp GGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTGCTCACCCGGTTAGCACATaGTCAATTCGCAAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: GCAPPAPVGSPAPRPGSAHPVST*SIRKFP
Trigger: TGGGAACTTGCGAATTGACAATGTGCTAACCGGGTG...AGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CAA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 3 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 72 bp CATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGCAATGCACCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: HASSRSPGTWCR*RAGPRCNAPAA
Trigger: AGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp GAGTCCTTCTCCACCAGGCTCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: ESFSTRLWEISL*ALSLAEYAWSR
Trigger: GCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGGAGAAGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp CTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTG +
Preference number: 3 (lower is better)
Translates to: LSETSSLPGETG*RLLSSCGRSAV
Trigger: CACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR CCA 72 bp GGCGGTTCAGCTCCTCATCCCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCTCTTGCAATTCCAGCT +
Preference number: 3 (lower is better)
Translates to: GGSAPHPRTPGR*LSSGTALAIPA
Trigger: AGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAGGAGCTGAACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR-3UTR CAA 90 bp TCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: SCAGCRHCPAGRPGGHGCAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...ACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR TCA 72 bp CCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGGGCTATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PPEDGLRVTVHC*VMSWMRAMSCC
Trigger: GCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp AGCTGTGCCAAGAGGGCCTGGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAAGCCCCCACAGTCCCG +
Preference number: 3 (lower is better)
Translates to: SCAKRAWAEEQD*INRHTEAPTVP
Trigger: CGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCCTCTTGGCACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR GCA 72 bp AAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCCTGGAACGCCAGCATG +
Preference number: 3 (lower is better)
Translates to: KMPVRFPPMTLI*SSNASPWNASM
Trigger: CATGCTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp AACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATG +
Preference number: 3 (lower is better)
Translates to: NMVSVTCRTSLQ*TCSSPLALPSM
Trigger: CATGGAGGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp AGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: SWGWCRARQYPS*CKSSRGGHASS
Trigger: GCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp GGTCGTGTCCTCCAGGACTGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAGAGCCTCTGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GRVLQDCLEQGL*GFVINQSLCGA
Trigger: GGCCCCACAGAGGCTCTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR TCA 72 bp CGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCAGAG +
Preference number: 3 (lower is better)
Translates to: RPPPGSCPPGLP*TRALRLRNQPE
Trigger: CTCTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
3UTR GCA 72 bp AGACATCAAGCCTTCCAGGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGA +
Preference number: 3 (lower is better)
Translates to: RHQAFQGRLAAG*FPAAEGLPCLG
Trigger: TCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
3UTR GCA 72 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCCAGCTGGACGTCCAGG +
Preference number: 3 (lower is better)
Translates to: ETWMTMGKMSIL*RVQTLSSWTSR
Trigger: CCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR GCA 72 bp TCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCACAGGAGGAAACCATG +
Preference number: 3 (lower is better)
Translates to: SPDSWSLAVLRD*SCNSSSQEETM
Trigger: CATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp CAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTCCCACTGCAGAAACAT +
Preference number: 3 (lower is better)
Translates to: QRSPGPPVLGKA*EDVPPVPLQKH
Trigger: ATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 72 bp GGCTTTGTCCATACTGACGATGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCA +
Preference number: 3 (lower is better)
Translates to: GFVHTDDADQLL*SPRRWLAGHGA
Trigger: TGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: SLAPGLILLLAQVLCQALAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
3UTR TCA 72 bp CGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTTCGTAATCAACCATCA +
Preference number: 3 (lower is better)
Translates to: RPPPGSCPPGLP*TRALRLRNQPS
Trigger: TGATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR TCA 72 bp ACAAACGCAGAGGGCTGGCCTTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCTGTGGTCCCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: TNAEGWPWLCPY*RCGPASVVPQK
Trigger: CTTCTGGGGGACCACAGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR GCA 72 bp TCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCCCTGGGCTGTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: SQEETMLARCSS*FSRYSPGLWPR
Trigger: TCTTGGCCACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR GCA 72 bp GACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAGGAAACCATGTTGGCT +
Preference number: 3 (lower is better)
Translates to: DSWSLAVLRDCS*NSSSQEETMLA
Trigger: AGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CCA 72 bp ATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATG +
Preference number: 3 (lower is better)
Translates to: MSILCRVQTLSS*TSRRAWVFFSM
Trigger: CATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR CCA 72 bp GCACATTGTCAATTCGCAAGTTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCATGTCACCGTCCACAGA +
Preference number: 3 (lower is better)
Translates to: AHCQFASSQLLQ*SSWAGHVTVHR
Trigger: TCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 72 bp GGTCGTGTCCTCCAGGACTGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCATCACAATCTGGGTGCC +
Preference number: 3 (lower is better)
Translates to: GRVLQDCLEQGL*GFVINHHNLGA
Trigger: GGCACCCAGATTGTGATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGACACGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp ATGTCCCCTCTCTGGCTCCAGGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCT +
Preference number: 3 (lower is better)
Translates to: MSPLWLQASYSS*LKYSARHFLNP
Trigger: AGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGAGGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CCA 72 bp GCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCC +
Preference number: 3 (lower is better)
Translates to: ALAIPAHRRKPC*LAAAPASVDTA
Trigger: GGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 72 bp GAACAGCTTCCTGATTCTTGGACACTGCTGTCAAAATaGCATTCAGTCTGCAACAGCCCCAGGAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: EQLPDSWTLLSK*HSVCNSPRRQG
Trigger: CCCCTGCCTCCTGGGGCTGTTGCAGACTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAGGAAGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CCA 72 bp CGCAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTaGGCATGTCACCGTCCACAGATTCAAAAAGTAAAA +
Preference number: 3 (lower is better)
Translates to: RKFPAPAMVQLG*ACHRPQIQKVK
Trigger: TTTTACTTTTTGAATCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR TCA 72 bp AGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGTTCAAGGTTAGACCCC +
Preference number: 3 (lower is better)
Translates to: RKVCSYKWLHCV*PARGEGSRLDP
Trigger: GGGGTCTAACCTTGAACCCTCACCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CCA 72 bp TTGAGCTTCTTTGCCATCTTCTCGTTGACAGAGACGTaGATGACGATGGGGAAGATGTCCATCCTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: LSFFAIFSLTET*MTMGKMSILCR
Trigger: CCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAGAAGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
3UTR-3UTR CAA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR-3UTR CAA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 3 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR TCA 72 bp GTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAAGTGTGCAGTTACAAG +
Preference number: 3 (lower is better)
Translates to: VSSSDHAKPGKG*RCFHRKVCSYK
Trigger: CTTGTAACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CSRCLSAATARSRSEWMRAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...GCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CSRCLSAATARSRSEWMRRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATGAAGATGCCCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: KAIWSAAEPGVTRWMKMPRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HSMAGHPAAAPGHLSLLDPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...ATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HSMAGHPAAAPGHLSLLDAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...ATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCARSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AATCTGGGTGCCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: NLGARAQGHLVRRRARGDGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...GTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCATGAGGTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ASMVTWLRILRAGLRRMRFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...CCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: VHAVGMPAAAALEHGVGDPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...GTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AATCTGGGTGCCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: NLGARAQGHLVRRRARGDPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...GTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: PSRSLQPSGARLLYRQGACPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCCCCATGGCTGGGCGCTaGGAGGACCGCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TFFCSSAMAWRTQLSRPSPMAGR*EDRSCG
Trigger: CCCACAGGAGCGGTCCTCCCAGCGCCCAGCCATGGG...GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650867.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp ACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTAGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TAEQAVQVAPAVRSQAAVAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...TACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAASRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCATGAGGTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASMVTWLRILRAGLRRMRWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...CCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTTCTCTTCCCAGTACTGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLFPVLLSLPLGSHGPLPPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...CGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTGGGAAGAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TFFCSSAMAWRTQLSRPSFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...GGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSRSLQPSGARLLYRQGAPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGATGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCARTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: LERQHGDLAQDPAGWPPPRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCAGGGGAGACTGGCTGCAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTGTCAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGDWLQAAFQLRKVCRVSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...GACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR TCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTAVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGIGHQGEAALGPEARAGRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: QALGNLPLSTVPRGVRLVRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTGGAGCCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVWSPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGCTCCA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTGGAGCCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAWSPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGCTCCA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCCATGGCTGGGCGCTaGGAGGACCCAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPMAGR*EDPRFS
Trigger: TGAGAACCTTGGGTCCTCCCAGCGCCCAGCCATGGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LHSMAGHPAAAPGHLSLLQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...CAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: HSMAGHPAAAPGHLSLLDSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...ATCCAGGAGGGAGAGGTGTCCGGGGGCCGCTGCTGGGTGACCCGCCATGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: VFFSMRDSTAWRVTQQRPPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...GGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRATGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVARDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVASSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp TCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACACTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SWCKSSRGGHASSRSPGTLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...TGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR TCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRALASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCTCCACCAGCTCCTGTCGGCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QPRPAPAASGCAPPAPVGLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...GCCGACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVALVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSRSLQPSGARLLYRQGARAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCCGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000650867.1
CDS-3UTR CCA 90 bp GTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VFFSMRDSTAWRVTQQRPLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...GGGCCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SCAGCRHCPAGRPGGHGCAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...ACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVALAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGCCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGCT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCCAGAAGCACGTGCTaGAGCCCTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPRSTC*SPPSCW
Trigger: CCAGCAGGATGGAGGGCTCCAGCACGTGCTTCTGGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCCCAGAAGCACGTGCTaGAGCCCTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSPRSTC*SPPSCW
Trigger: CCAGCAGGATGGAGGGCTCCAGCACGTGCTTCTGGG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTTGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RARVAATLGTTQAPHPLPWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGATGCGCTCCACCAGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTGCTTACAGCCCTGGGCTGTaGCCAAGAAGGACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCAPPAPVGSPAPRPGSAYSPGL*PRRTFP
Trigger: TGGAAAGGTCCTTCTTGGCCACAGCCCAGGGCTGTA...AGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCTGGTGGAGCGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAASAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGATGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571450.1
ENST00000575500.5
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCTATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCTCCGTAGGCTaGGCCCTCCGTAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRSPSVG*ALRRLT
Trigger: GGTCAGCCTACGGAGGGCTCAGCCTACGGAGGGGCT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCTGGCCTCCGCCGCATaGGGACGCCGCTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQLASAA*GRRCCL
Trigger: TAAGCAGCAGCGGCGTCCTCATGCGGCGGAGGCCAG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SWCKSSRGGHASSRSPGTVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSLQPSGARLLYRQGARSKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTGGGCATGTCACCGTCCACAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVPSSCNGPAGLGMSPSTRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGARPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCTCGCTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: SGKSPSEHCPSRSTPGLASASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...AGCGAGACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGATCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAAAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTTCTCTTCCCAGTACTGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLFPVLLSLPLGSHGPLPASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTGGGAAGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LAHLGLQRIHLLPVELAGPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GCCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTGGTCCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QALGNLPLSTVPRGVRLVHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...GACCAGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGACCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGIGHQGEAALGPEARAGPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: SVVPQKMACGSRCTAESCPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCAGGCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FFCSSAMAWRTQLSRPSRPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...CCTGGACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCCTGGGAAGTGGAGGTTaGAGAGAGCTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCALGSGG*RELRWC
Trigger: GCACCATCTCAGCTCTCTGCAACCTCCACTTCCCAG...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp TGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: CAGCRHCPAGRPGGHGCSRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...AGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCGGCCCAGAAGCACGTaGTGGAGCCTGTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTRPRST*WSLWRR
Trigger: TCTCCTCCACAGGCTCCAGCACGTGCTTCTGGGCCG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCTCCGTGCAGCAGGGTaGGGTCCACAGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQLRAAG*GPQSPQ
Trigger: CTGCGGGGACTGTGGACCCCACCCTGCTGCACGGAG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTGGACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QGIGHQGEAALGPEARAGRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TCCAGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTCGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTARFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAGCCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGCT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTCCCAGAAGCACGTGCTaGAGCCCTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTPRSTC*SPPSCW
Trigger: CCAGCAGGATGGAGGGCTCCAGCACGTGCTTCTGGG...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATGGCCCAAGAAGGGCTaGGGTGCAAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAWPKKG*GAKPGQ
Trigger: CTGACCTGGCTTTGCACCCCAGCCCTTCTTGGGCCA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTGGGTGGGACGGAGCTaGGCAGAAGGAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKWVGRS*AEGRAC
Trigger: ACAGGCTCTTCCTTCTGCCCAGCTCCGTCCCACCCA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCCAGAAGCACGTGCTaGAGCCTGTGGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGPRSTC*SLWRRG
Trigger: TCCTCTCCTCCACAGGCTCCAGCACGTGCTTCTGGG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651672.1
3UTR CAA 72 bp AAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCCAGGCTTCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KARSGEGRVRWA*YGGTGARLLWD
Trigger: GTCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CAA 72 bp CCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PWNMVSVTCRTS*QCTCSSPLALP
Trigger: GGGCAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGTCACCGACACCATGTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCACCTCGTCCAGTGCCGTaGGTGCGGAGTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPPRPVP*VRSPCG
Trigger: GCCGCAGGGACTCCGCACTCACGGCACTGGACGAGG...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRGAGRG*GGWGRC
Trigger: GCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCC...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTAWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTAAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: TAEQAVQVAPAVRSQAAVRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...TACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651388.1
CDS-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGASRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: DVDDDGEDVHPVQGADTVPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...GACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGAGCCCTCCGTAGGCTaGCCTGCTCTTCGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLREPSVG*PALRRM
Trigger: CATCCGGCGAAGAGCAGGTCAGCCTACGGAGGGCTC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRALGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVADLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTAGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: TAEQAVQVAPAVRSQAAVDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...TACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTACGGGGGTACTGGTaGCAGGCTTCTCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGVRGYW*QASLGH
Trigger: GTGTCCCAGAGAAGCCTGGCACCAGTACCCCCGTAC...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGARGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGCGGTGGCTCACGCCTaGAATCCAGCACTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDAVAHA*NPALSE
Trigger: CTCTGAAAGTGCTGGATTGCAGGCGTGAGCCACCGC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVATILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: VQLDVQEGMGVLFHEGLHAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...GTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCTCGCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SRSFCSSHTWACSAFTFSRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAATGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAACGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTGCAATTCCAGCTCACGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTPGRWLSSGTALAIPAHGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...GTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSREPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: CAGCRHCPAGRPGGHGCSSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...AGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGAGGGACTCCACAGCATaGCGGGTCACCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRRDSTA*RVTQQR
Trigger: CCGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGTGGGTGGGACGGAGCTaGGCAGAAGGAAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLWVGRS*AEGRAN
Trigger: ATTGGCTCTTCCTTCTGCCCAGCTCCGTCCCACCCA...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR TCA 90 bp GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: VQLDVQEGMGVLFHEGLHQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...GTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp CCACCAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGSGKSPSEHCPSRSTPSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...AGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp GCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: ARTPGPAAHSPSPCRVGRWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...CCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLLEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLAPGLILLLAQVLCQALSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCAGGTCTCCCTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QPSGARLLYRQGARSRSPYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...GGGAGACCTGGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWCKSSRGGHASSRSPGTYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...TGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTAGCCTGCCAACATGGTaGAACCCCATTTCTACTAGA +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLSLPTW*NPISTR
Trigger: TCTAGTAGAAATGGGGTTTCACCATGTTGGCAGGCT...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAATGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTACAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571450.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCTCCTTCTGCAGCTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: APSAARTPGPAAHSPSPCARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...ACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCAGAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTACACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPIRTSR*FSRGQG
Trigger: GCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGAT...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCACAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTADLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACCAGGGTATAGGGCACCAGGGTGAGGCAGCTCTCGGCCCAGAAGCACGTGCTCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: HQGIGHQGEAALGPEARAPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...AGCACGTGCTTCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATACCCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAARTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRARQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QGADTVQLDVQEGMGVLFREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...GAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGAGGGGCAAGGCCAGGTaGTGGCGGACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGRGKAR*WRTWVL
Trigger: GAGGACCCAGGTCCGCCAGCACCTGGCCTTGCCCCT...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGPHPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRELRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTGGAGGAGGCACCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LLLAQVLCQALLKPLEEAPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...TGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGCCGTCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HLLLLVGDGLADTAEQAVRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GACGGCCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRERSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGGGGCGCGGGGCTGCTaGAGCGGAAGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRGARGC*SGSCPP
Trigger: TGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGGCCATCTGGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATGAAGATGCCCCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: KAIWSAAEPGVTRWMKMPRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...GGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGCCCGGGGTGACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: EPGVTRWMKMPVRFPPMTTSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...CGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGTCACCCCGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVDRDVDDDGEDVHPVQGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTGGCCTCCGCCGGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: LERQHGDLAQDPAGWPPPEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...CGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGLVRGY*CQASLG
Trigger: TCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGGCAAGGCCAGGTGCTaGCGGACCTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLGKARC*RTWVLP
Trigger: GGGGAGGACCCAGGTCCGCCAGCACCTGGCCTTGCC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCTGGGTGGGACGGAGCTaGGCAGAAGGAAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPWVGRS*AEGRAN
Trigger: ATTGGCTCTTCCTTCTGCCCAGCTCCGTCCCACCCA...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGTGGGTGGGACGGAGCTaGGCAGAAGGAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKWVGRS*AEGRAC
Trigger: ACAGGCTCTTCCTTCTGCCCAGCTCCGTCCCACCCA...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGAGCCGTCCACCCTCCTaGGAAGCCCCACGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLSRPPS*EAPRPP
Trigger: AGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCT...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAAYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLWLCPY*RCGPAS
Trigger: AGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCA...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGWLCPY*RCGPAS
Trigger: AGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCA...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTACACTGCTGTCAAAATaGCATTCAGTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLTLLSK*HSVCNS
Trigger: GCTGTTGCAGACTGAATGTCATTTTGACAGCAGTGT...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGGAGGTTGCAGAGAGCTaGGATGGTGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGEVAES*DGATAF
Trigger: GAATGCAGTGGCACCATCTCAGCTCTCTGCAACCTC...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR TCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGAGCCCCTCCGTAGGCTaGGCCCTCCGTAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLSPSVG*ALRRLT
Trigger: GGTCAGCCTACGGAGGGCTCAGCCTACGGAGGGGCT...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREPFSAG*WVGRSW
Trigger: CCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAGTCCAGTGCCGTGAGTaGGGAGTCCCTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPVQCRE*GVPAAQ
Trigger: CTGTGCCGCAGGGACTCCGCACTCACGGCACTGGAC...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAAGGTGCTCCTGCAGCTaGTGGCACCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRRCSCS*WHRRSS
Trigger: GCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCT...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp CTTCTCTTCCCAGTACTGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLFPVLLSLPLGSHGPLPHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...CGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTGGGAAGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGGGGTGCAAAGCCAGGTCAGGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGCKARSGEGRVRWALYGAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...CCCGTACAAGGCCCAGCGGACTCTGCCTTCCCCTGACCTGGCTTTGCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp TCCCCTCCCGACACCCGGTTAGCACATTGTCAATTCGCAAGTTCCCAGCTCCTGCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SPPDTRLAHCQFASSQLLQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...CAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CTGGCGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LADTAEQAVQVAPAVRSQLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...CTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGATGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAGCTCGAACACCTGCCTGCGGAGGGAGTCCTTCTCCACCAGGCTCTGGGAAAGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SARTPACGGSPSPPGSGKVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...TTTCCCAGAGCCTGGTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CCATCCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: PSCWGPTGPCQRTNAEGWPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...CCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAERAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSPGVVGDGAVRGSILHGRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...ACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCTGCTCCTCTGAGGTaGCCAACCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGAAPLR*PTAVGP
Trigger: AGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSPGVVGDGAVRGSILHGHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...ACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CGGACACAGCTGAGCAGGCCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: RTQLSRPSRSLQPSGARLAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...CAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGGCCTGCTCAGCTGTGTCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCCATTCACCTTCTCCCTaGTCTCGCTGCCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSHSPSP*SRCLSA
Trigger: TGCCGAGAGGCAGCGAGAGCAGGGAGAAGGTGAATG...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCTCCGTAGGCTGACCTaGTCTTCGCCGGATGGACTG +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHLRRLT*SSPDGL
Trigger: CAGTCCATCCGGCGAAGAGCAGGTCAGCCTACGGAG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651388.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCCCATGGCTGGGCGCTaGGAGGACCCAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGPMAGR*EDPRFS
Trigger: TGAGAACCTTGGGTCCTCCCAGCGCCCAGCCATGGG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQTILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCACCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGGCTGTCCTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: LAVLRDCSCNSSSQEETMWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...CATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGARFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAACSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPPLLLP*TGLPGP
Trigger: AGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCCCGGGGTGACCCGGTaGATGAAGATGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPPGVTR*MKMPVR
Trigger: CCTCACGGGCATCTTCATCCACCGGGTCACCCCGGG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGCCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGSPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGCT...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVTSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDTSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGGTGCCAGGCTTCTCTaGGACACCCCCACCGAACAG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGGARLL*DTPTEQ
Trigger: CTGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTGGCCCAAGAAGGGCTaGGGTGCAAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQWPKKG*GAKPGQ
Trigger: CTGACCTGGCTTTGCACCCCAGCCCTTCTTGGGCCA...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCTGTCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSPVITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGACAGG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp CAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTGGGCATGTCACCGTCCACAATGGTCCAGCTGGGCTaGGCATGTCACCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QVPSSCNGPAGLGMSPSTMVQLG*ACHRPQ
Trigger: CTGTGGACGGTGACATGCCCAGCCCAGCTGGACCAT...TGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CCACCAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCCTAAGGACCTTTCCACCTaGACTCTCCCCTCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PPGSGKSPSEHCPSRSTPKDLST*TLPSRH
Trigger: GTGTCGGGAGGGGAGAGTCCAGGTGGAAAGGTCCTT...AGGCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGATGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGCCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGGGGCACAGACCCACTaGAAGTACCGTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVGAQTH*KYRLHH
Trigger: GTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCC...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGGGGCACAGACCCACTaGAAGTACCGTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGGAQTH*KYRLHH
Trigger: GTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAG +
Preference number: 4 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLLEQGL*GFVINQ
Trigger: CTGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTASQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGATGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCATGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGAGCTGCTCCTCTGAGGTGCCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSCSSEVPNRCRPFLSFFWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...AAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTTCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAATCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GGACTCTCCCCTCCCGACACCCGGTTAGCACATTGTCAATTCGCAAGTTCCCAGTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLSPPDTRLAHCQFASSQWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...CTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLAPGLILLLAQVLCQALWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGPGETG*RLLSSC
Trigger: GCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGG...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSPSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LSPGVVGDGAVRGSILHGACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...ACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: SGASGSREGMGRRPSCPTKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: VHTTFFCSSAMAWRTQLSKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...GCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGAGCTGCTCCTCTGAGGTGCCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSCSSEVPNRCRPFLSFFRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...AAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAACCACTGGAGACAGATaGCTCTTGCAGGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGTTGDR*LLQGSV
Trigger: TACAGATCCCTGCAAGAGGCATCTGTCTCCAGTGGT...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCACTCCGTAGGCTGACCTaGTCTTCGCCGGATGGACTG +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGALRRLT*SSPDGL
Trigger: CAGTCCATCCGGCGAAGAGCAGGTCAGCCTACGGAG...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCAGAGAGTCAACTaGCAACCCTTCCCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHGQRVN*QPFPSR
Trigger: TCGACTGGGGAAGGGTTGGCAGTTGACTCTCTGGCC...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp CGCCAGGCTGAAAGTCAGCGAGCGCAGTTTCTCATTCTCCTCCTTCAGGCGGTTAGTCAGAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: RQAESQRAQFLILLLQAVSQSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTCTGACT...AACCGCCTGAAGGAGGAGAATGAGAAACTGCGCTCGCTGACTTTCAGCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAELQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCCATGGCTGGGCGCTaGGAGGACCCAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPMAGR*EDPRFS
Trigger: TGAGAACCTTGGGTCCTCCCAGCGCCCAGCCATGGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCCCATGGCTGGGCGCTaGGAGGACCCAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLAPGLILLLAQVLCQALPMAGR*EDPRFS
Trigger: TGAGAACCTTGGGTCCTCCCAGCGCCCAGCCATGGG...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCCCATGGCTGGGCGCTaGGAGGACCCAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPPMAGR*EDPRFS
Trigger: TGAGAACCTTGGGTCCTCCCAGCGCCCAGCCATGGG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAETILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACCAGGCTCTGGGAAATCTCCCTCTGAGCACTGTCCCTCGCGGAGTACGCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LHQALGNLPLSTVPRGVRRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GCGTACTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCAGAGCCTGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATCGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGACGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAATGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRECSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DTVQLDVQEGMGVLFHEGLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...TCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVVPQKMACGSRCTAESCPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCATCCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: PSCWGPTGPCQRTNAEGWMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...CCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VHAVGMPAAAALEHGVGDSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...GTCACCGACACCATGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGTGCCAGGCTTCTCTaGGACACCCCCACCGAACAG +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREGARLL*DTPTEQ
Trigger: CTGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACC...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACTGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASQHMWASASAPGKGGSDWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GQRHSICGLLPLPRARVAWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTGGAGTAAAGATGTTTaGCCCAAGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGQRHSICGLLPLPRARVWSKDV*PKKGWG
Trigger: ACCCCAGCCCTTCTTGGGCCAAACATCTTTACTCCA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCCAGAAGCACGTGCTaGAGCCAGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLPRSTC*SQASPS
Trigger: GGAGGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGG...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGGATAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HVLDEGYELLLSPGVVGDSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...ATCCCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: PASQHMWASASAPGKGGSLEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCATCCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSCWGPTGPCQRTNAEGWYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...CCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR TCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGGTCCTCCCCGAGCCCTaGAGGTGGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQVLPEP*RWSKDV
Trigger: AACATCTTTACTCCACCTTCAGGGCTCGGGGAGGAC...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCTCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLSRTAS*FLDTAV
Trigger: GACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGA...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGTCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SICGLLPLPRARVAATLGSRTAS*FLDTAV
Trigger: GACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGA...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: DVDDDGEDVHPVQGADTVFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...GACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGGCGGCTGGGGCAGATaGAGCGTACGATCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFGGWGR*SVRSCG
Trigger: GCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVVSRGL*STSSSS
Trigger: GGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCAC...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAAKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTAGGCCCAGGTGCTCCTaGAGCTGCTGGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGRPRCS*SCWHRR
Trigger: GCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCT...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RWPASQHMWASASAPGKGHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTGGGCATGTCACCGTCCACATCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QVPSSCNGPAGLGMSPSTSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...TGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LCGAFTPLVMRATHSAGQRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...CTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACAGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SWCKSSRGGHASSRSPGTARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...TGTTCCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCGCACACCTGGGCCTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LAHLGLQRIHLLPVELAGAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...GCCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CCATCCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSCWGPTGPCQRTNAEGWAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...CCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCCTCCCGACACCCGGTTAGCACATTGTCAATTCGCAAGTTCCCAGCTCCTGTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPPDTRLAHCQFASSQLLSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...CAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp CTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLVDRDVDDDGEDVHPVQPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...CTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGACTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGACCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPRTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTGGAGGAGGCACGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LLLAQVLCQALLKPLEEARQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...TGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCACACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGTILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVTILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CGTAATCAACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RNQPEPLWGLHTSSDACYSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...GTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTGATTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGCTCCTCATCCCCGGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTTGCGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSPDSWSLAVLRDCSCAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...GCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCGGGGATGAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTGCTTCAGTAGATTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: PAHRRKPCWLAAAPASVDCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...ATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp CAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTGCTTCAGCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: QFQLTGGNHVGSLQLLLQRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...CTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp CAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: QGADTVQLDVQEGMGVLFSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...GAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp CCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGACTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSVLTFTDRQQKPSTLLRLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...TCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGCCCTGGAGTAGTTaGGGATGGTGCCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSEPWSS*GWCRAR
Trigger: CCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAELLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TWMTMGKMSILCRVQTLSQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...GGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAATTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRELDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGAAGGCAGAGTCCGCTaGGCCTTGTACGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREEGRVR*ALYGGT
Trigger: AGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTC...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTATAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GALLSHVLDEGYELLLSPITITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTAT...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571450.1
CDS-3UTR CCA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGAGAGGCTGGACCACTaGAGACAGATGCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEERLDH*RQMPLA
Trigger: TGCAAGAGGCATCTGTCTCCAGTGGTCCAGCCTCTC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACCAACCAGAGCCTCTGTaGGGCCTTCACACCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHQPEPL*GLHTSS
Trigger: ACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTG...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp TCCACCTGGACTCTCCCCTCCCGACACCCGGTTAGCACATTGTCAATTCGCAAGCTGCAATGGTCCAGCTaGGCTGGGCATGTCACCGTC +
Preference number: 4 (lower is better)
Translates to: STWTLPSRHPVSTLSIRKLQWSS*AGHVTV
Trigger: GACGGTGACATGCCCAGCCCAGCTGGACCATTGCAG...CTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGAGAGTCCAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCCAGGCTGCAGCCCGGTaGCCAGGGTGTAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGQAAAR*PGCRRQ
Trigger: CTGACGTCTACACCCTGGTCACCGGGCTGCAGCCTG...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPLEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGACCCGGATGTAGAATaGGTCCCCCGAGGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSDPDVE*VPRGRH
Trigger: GTGGCGACCTCGGGGGACTCATTCTACATCCGGGTC...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGGGTGTTCTTTTCCATaGGGGACTCCACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRGCSFP*GTPQHG
Trigger: GCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCC...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATCCTGGCGGACACAGCTaGGCAGGCCGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDPGGHS*AGRPGR
Trigger: GCGACCTGGACGGCCTGCTCAGCTGTGTCCGCCAGG...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGGATGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: HVLDEGYELLLSPGVVGDVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...ATCCCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAATGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCATCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRASQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCATCCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PSCWGPTGPCQRTNAEGWQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...CCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RSPTASSRVVSSRTALNKQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...CTTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGATGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp CTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LCGAFTPLVMRATHSAGQKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...CTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGSASSW*RPSARV
Trigger: GACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGA...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGCTCCTCCTGCAGGCTaGGGCAGCGTGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDAPPAG*GSVRRP
Trigger: TGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGC...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGACCTGGTCCGTCAGCTCGAACACCTGCCTGCGGAGGGAGTCCTTCTCCACTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ADLVRQLEHLPAEGVLLHLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...GTGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGACGGACCAGGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CTGCAGCGCATTCACCTTCTCCCTGTAGAGTTGGCAGGCCATCTTACTCTTCTGGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: LQRIHLLPVELAGHLTLLAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...CAGAAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAGGTGAATGCGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR GCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGLGQMA*IRTSRC
Trigger: GCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAG...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGGATAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HVLDEGYELLLSPGVVGDRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...ATCCCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: DTVQLDVQEGMGVLFHEGPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...TCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKRTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: GHGALLSHVLDEGYELLLMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGATTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRESSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTTGGAGCCCTCCATCCTaGTGGGGTCCAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGWSPPS*WGPTGP
Trigger: GGGGCCAGTTGGACCCCAGCAGGATGGAGGGCTCCA...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGCGGCCCAGAAGCACGTaGTGGAGCCCTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWRPRST*WSPPSC
Trigger: GCAGGATGGAGGGCTCCAGCACGTGCTTCTGGGCCG...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp AGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCAGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SSWGWCRARQYPSWCKSSAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...TGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTGGAGGAGGCAAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLAQVLCQALLKPLEEARAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...TGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCANVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCTGGGAAGTGGAGGTTaGAGAGAGCTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGLGSGG*RELRWC
Trigger: GCACCATCTCAGCTCTCTGCAACCTCCACTTCCCAG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp CAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGTTGCAGGGATCTGTATaGAAGGTTCTCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QRHSICGLLPLPRARVAALQGSV*KVLRFA
Trigger: AGCAAACCTGAGAACCTTGCATACAGATCCCTGCAA...CGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCTAATTTTTCTCCACTaGTCACAGAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGLIFLH*SQSCSH
Trigger: GTGGCTGCAGCTCTGTGAGCAGTGGAGAAAAATTAG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCTGCGGGCTGCTGGGTaGGACGGAGCTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHLRAAG*DGAGQK
Trigger: CTTCTGCCCAGCTCCGTCCCACCCAGCAGCCCGCAG...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000650867.1
CDS-3UTR CCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: EKPHGLLQGRVLQDCLEQAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...TTGTTCAAGGCAGTCCTGGAGGACACGACCCTGGAGGAGGCCGTGGGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCACTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGALIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCATGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: DVDDDGEDVHPVQGADTVADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...GACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCTGTGGTCCCCCAGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: SVVPQKMACGSRCTAESCLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...ACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGGACCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAAASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTTCGTCGGCGATGGCCTaGCGGACACAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CHLLVDRDVDDDGEDVHPSSAMA*RTQLSR
Trigger: CCTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGA...AGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTGGGTGGCAGCGACCTTaGGGACCACCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVGWQRP*GPPRRP
Trigger: GGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCC...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGGTGCCAGGCTTCTCTaGGACACCCCCACCGAACAG +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFGARLL*DTPTEQ
Trigger: CTGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATCCCATGGCTGGGCGCTaGGAGGACCGCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDPMAGR*EDRSCG
Trigger: CCCACAGGAGCGGTCCTCCCAGCGCCCAGCCATGGG...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTGCTCCCAGCTCCTGCAATaGTCCAGCTGGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCNSSSQEETMLARCSSCSQLLQ*SSWAGH
Trigger: ATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGA...GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
3UTR CAA 72 bp TGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACGATGCGGACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WPLSKDKRRGLA*ALSILTMRTSF
Trigger: GAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
3UTR CAA 72 bp GGACTCCTGGTCGCTGGCTGTCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGAGGAAACCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: GLLVAGCPQGLL*QFQLTGGNHVG
Trigger: GCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGGAACGCCAGCATGGTaGCCTGGCTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGGTPAW*PGSGSC
Trigger: GCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTATGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVWLCPY*RCGPAS
Trigger: AGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCA...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCTCTCCCTCCTGGATaGTGTCCCCTCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRPLPPG*CPLSGS
Trigger: GGAGCCAGAGAGGGGACATCATCCAGGAGGGAGAGG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGGGGCACAGACCCACTaGAAGTACCGTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSGAQTH*KYRLHH
Trigger: GTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCC...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACACTGCTGTCAAAATaGCATTCAGTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPTLLSK*HSVCNS
Trigger: GCTGTTGCAGACTGAATGTCATTTTGACAGCAGTGT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: DVDDDGEDVHPVQGADTVQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...GACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGATCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ALLSHVLDEGYELLLSPGSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...TCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLAPGLILLLAQVLCQALSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTACTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SPGVVGDGAVRGSILHGVLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...TACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAAAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EKSGASGSREGMGRRPSCLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGCTGGCGAAGCTGTGTaGGCAGCTCGCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRAGEAV*AARRPG
Trigger: ACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FAIFSLTETWMTMGKMSIPGGSA*SWRSCV
Trigger: CACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGG...GATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCCTGGCTCAGGATCCTaGGGGCTGGCCTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVPGSGS*GLASAA
Trigger: TGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGG...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRERTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSREMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTCGGCCCAGAAGCACGTaGTGGAGCCCTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGRPRST*WSPPSC
Trigger: GCAGGATGGAGGGCTCCAGCACGTGCTTCTGGGCCG...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGCAGCCTCCAGGAGCTaGTCCTCTGAGGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPAASRS*SSEVPN
Trigger: GTTGGGCACCTCAGAGGAGCAGCTCCTGGAGGCTGC...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTCGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GEGRVRWALYGGTGARLLFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACCACCCGCTGCCTCTGTaGTTTTGGTCACTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: VQLDVQEGMGVLFHEGLHHPLPL*FWSLQK
Trigger: CTTTTGGAGTGACCAAAAGCACAGAGGCAGCGGGTG...GTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 4 (lower is better)
Translates to: MWASASAPGKGGSDLGDHLILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGAGACAGATGCCTCTTaGAGGGATCTGTATGCAAGG +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPETDAS*RDLYAR
Trigger: CCTTGCATACAGATCCCTGCAAGAGGCATCTGTCTC...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGATCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRSSQSG*PGARPS
Trigger: AGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGA...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp GTCGCTGGCTGTCCTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VAGCPQGLLLQFQLTGGNARCSS*FSRYSP
Trigger: AGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...GTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGCCAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTTILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp CGTAATCAACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: RNQPEPLWGLHTSSDACYQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...GTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTGATTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTTCCTCCTCGTCCAGCTaGCACAGCACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVSSSSS*HSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGA...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRRFMRL*SASSWC
Trigger: GCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACGGACTCCTGGTCGCTaGCTGTCCTCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRRTPGR*LSSGTA
Trigger: AGCAGTCCCTGAGGACAGCCAGCGACCAGGAGTCCG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACGTCTCTGGGGCAGATaGCATGCATCCGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRRLWGR*HASAPA
Trigger: GGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGCTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGAGCTGCTCCTCTGAGGTGCCCAACCGCTGTAGGCCCTTCTTGAGCTTCTTTCTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSCSSEVPNRCRPFLSFFLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...AAAGAAGCTCAAGAAGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCATCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTGGAGGAGGCAGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLAQVLCQALLKPLEEAADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...TGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: TWMTMGKMSILCRVQTLSMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...GGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRTSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: VQLDVQEGMGVLFHEGLHTSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...GTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATTGCCCCGGGCAAGGGTaGCAGCGACCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDCPGQG*QRPWGP
Trigger: TGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCA...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGAGAGAGGCTGGACCACTaGAGACAGATGCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: DTVQLDVQEGMGVLFHEGERLDH*RQMPLA
Trigger: TGCAAGAGGCATCTGTCTCCAGTGGTCCAGCCTCTC...TCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650867.1
CDS-3UTR CCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTCACCCTCCATCCTGCTaGGGTCCAACTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPHPPSC*GPTGPC
Trigger: ACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTG...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
3UTR CAA 72 bp ACCTGGACTCTCCCCTCCCGACACCCGGTTAGCACATaGTCAATTCGCAAGTTCCCAGCTCCTGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: TWTLPSRHPVST*SIRKFPAPAMV
Trigger: GACCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGGAGGGGAGAGTCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGSAARG*ASRPSA
Trigger: GGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACT...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: CAGCRHCPAGRPGGHGCSLEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...AGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LCGAFTPLVMRATHSAGQYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...CTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR TCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCATGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPWLCPY*RCGPAS
Trigger: AGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCA...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGGGCACAGACCCACTaGAAGTACCGTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPGAQTH*KYRLHH
Trigger: GTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCC...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp CTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGCAGGGAAGCGAGGACTaGATGTGGCCCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLVDRDVDDDGEDVHPVQQGSED*MWPNLW
Trigger: CCAGAGATTGGGCCACATTCAGTCCTCGCTTCCCTG...CTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650867.1
CDS-3UTR TCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGAGCCCTCCGTAGGCTaGCCTGCTCTTCGCCGGATG +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDEPSVG*PALRRM
Trigger: CATCCGGCGAAGAGCAGGTCAGCCTACGGAGGGCTC...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: CHLLVDRDVDDDGEDVHPFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...AGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCGAFTPLVMRATHSAGQSQVCF*RSSVQQ
Trigger: CTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGA...CTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCTGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTTGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CGTAATCAACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RNQPEPLWGLHTSSDACYSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...GTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTGATTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCACTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp TCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSWTSRRAWVFFSMRDSTAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...TGTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFASSRL*SRMSFS
Trigger: GGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATCAGTACTGCTCTCGCTaGCTCTCGGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDQYCSR*LSAATA
Trigger: GGCCGTGGCTGCCGAGAGGCAGCGAGAGCAGTACTG...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCATTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRALLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGTCAGCTCGAACACCTaGCTGCGGAGGGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRVSSNT*LRRESF
Trigger: GAAGGACTCCCTCCGCAGGCAGGTGTTCGAGCTGAC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCACCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCCGTGCAGGACCTCGTTaGAATGCACCTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGRAGPR*NAPAAP
Trigger: GGGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACG...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTTCACGCGGTGGGCATaGCAGCAGCCGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVFTRWA*QQPQPW
Trigger: CCAGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: VDLHRQAAEAVHPPEKPHAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...GTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCGTCCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LRPHHLLLLVGDGLADTAFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...AGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGGACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 4 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGLILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACCACTGGAGACAGATaGCTCTTGCAGGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: AEEQDCINRHTEAPTVPGTTGDR*LLQGSV
Trigger: TACAGATCCCTGCAAGAGGCATCTGTCTCCAGTGGT...TCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACCTAATTTTTCTCCACTaGTCACAGAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDLIFLH*SQSCSH
Trigger: GTGGCTGCAGCTCTGTGAGCAGTGGAGAAAAATTAG...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATCCTTTCTCTGCGGGCTaGTGGGTGGGACGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDPFSAG*WVGRSS
Trigger: CGAGCTCCGTCCCACCCAGCAGCCCGCAGAGAAAGG...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS-3UTR CCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp AGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCAACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSWGWCRARQYPSWCKSSTILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...TGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571450.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTACAGGGACTGCTGGCTaGGGGGCGCGGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSTGTAG*GARGCW
Trigger: CCAGCAGCCCCGCGCCCCCCAGCCAGCAGTCCCTGT...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCAGCAGCCGCAGCCCTaGAACATGGTGTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: FAIFSLTETWMTMGKMSIQQPQP*NMVSVT
Trigger: CGTCACCGACACCATGTTCCAGGGCTGCGGCTGCTG...GATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATTCTTCCCAACCGCCCTaGGCACGAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDSSQPP*ARGAQA
Trigger: GGCCTGTGCTCCTCGTGCCCAGGGCGGTTGGGAAGA...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRETSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCCCATGGCTGGGCGCTaGGAGGACCGCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWPMAGR*EDRSCG
Trigger: CCCACAGGAGCGGTCCTCCCAGCGCCCAGCCATGGG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGCTGGCCTCCGCCGCATaGGGACGCCGCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLLASAA*GRRSPR
Trigger: TCTCGGAGAGCGGCGTCCTCATGCGGCGGAGGCCAG...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCTCCAGGACTGCCTTaGACAAGGGCTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVPPGLP*TRALRL
Trigger: AAGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGTCACGGTGCACTGCTaGGTCATGTCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGVTVHC*VMSWMR
Trigger: CCTCATCCAGGACATGACTCAGCAGTGCACCGTGAC...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCTGTAGGCCCTTCTTaGGCTTCTTTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SSWTSRRAWVFFSMRDSTAVGPS*ASLPSS
Trigger: AGAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGC...TGTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTGGCTTCACTGTGTGTaGCCTGCACGTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPWLHCV*PARGEG
Trigger: ACCCTCACCACGTGCAGGTCACACACAGTGAAGCCA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCCGGTGGATGAAGATGCCCGTGAGGTTCCCGCCGATGACGCTGATCTGCTCCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: TRWMKMPVRFPPMTLICSKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...GGAGCAGATCAGCGTCATCGGCGGGAACCTCACGGGCATCTTCATCCACCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGACCCATGAATTCCTGTaGCTTGATTCTTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKTHEFL*LDSFHL
Trigger: CAAATGAAAAGAATCAAGTCACAGGAATTCATGGGT...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTAAGTCAACATCAGGCTaGAGCCCGGTGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVKSTSG*SPVTRV
Trigger: CACCCTGGTCACCGGGCTGCAGCCTGATGTTGACTT...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571450.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNRTALTGTQKPPQSREGLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATTGGTCTCGCTCCTTCTaGAGCTCGCACACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDWSRSF*SSHTWA
Trigger: GGCCCAGGTGTGCGAGCTGCAGAAGGAGCGAGACCA...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVRLAAG*FPAAEG
Trigger: ACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCT...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGATCTGCTCCAGCAATaGATCCCCCTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRDLLQQ*IPLERQ
Trigger: CTGGCGTTCCAGGGGGATGCATTGCTGGAGCAGATC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGAAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCATCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RDVDDDGEDVHPVQGADTDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...AGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GCGGTTTTCCAGAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACTTGCAGGGATCTGTATaGAAGGTTCTCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: AVFQRSPGPPVLGKAWEDLQGSV*KVLRFA
Trigger: AGCAAACCTGAGAACCTTGCATACAGATCCCTGCAA...GTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTCTGGAAAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAGAGACAGATGCCTCTTaGAGGGATCTGTATGCAAGG +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPETDAS*RDLYAR
Trigger: CCTTGCATACAGATCCCTGCAAGAGGCATCTGTCTC...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGACCACTGGAGACAGATaGCTCTTGCAGGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGTTGDR*LLQGSV
Trigger: TACAGATCCCTGCAAGAGGCATCTGTCTCCAGTGGT...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVLQSPV*CQLPPF
Trigger: GAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGCTGGCACAGCACCTTaGCCTGGCGCAGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWAGTAP*PGAGRG
Trigger: CCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSPAGCR*PQPGTR
Trigger: CCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTGCTTCAGTAGATAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: PAHRRKPCWLAAAPASVDSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...ATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CCA 90 bp ACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TWMTMGKMSILCRVQTLSAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...GGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RWLAGHGALLSHVLDEGYRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...ATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCACGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLRQYPS*CKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCG...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGCGGACCAGCTTCTGTaGTCCCCCAGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGADQLL*SPRRWL
Trigger: AAGCCATCTTCTGGGGGACCACAGAAGCTGGTCCGC...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCACTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAATGATGTCCCCTCTCTaGCTCCAGGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSMMSPL*LQASYS
Trigger: GGAGTATGAGGCCTGGAGCCAGAGAGGGGACATCAT...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGGTGCCAGGCTTCTCTaGGACACCCCCACCGAACAG +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCAGARLL*DTPTEQ
Trigger: CTGTTCGGTGGGGGTGTCCCAGAGAAGCCTGGCACC...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVLVRGY*CQASLG
Trigger: TCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTTGGCCCAAGAAGGGCTaGGGTGCAAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGWPKKG*GAKPGQ
Trigger: CTGACCTGGCTTTGCACCCCAGCCCTTCTTGGGCCA...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTTTGATTCTTTTCATTTaGAAGGAGAGGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFLILFI*KERLDH
Trigger: GTGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAA...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLAWRCW*AGGCAA
Trigger: TGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGCCTCCATGGCCAGGTTaGCCCGGATGTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWPPWPG*PGCRMS
Trigger: ACTCATTCTACATCCGGGTCAACCTGGCCATGGAGG...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR TCA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCAACACTGCTGTCAAAATaGCATTCAGTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: NRTALTGTQKPPQSREGATLLSK*HSVCNS
Trigger: GCTGTTGCAGACTGAATGTCATTTTGACAGCAGTGT...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp AAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACCCATGAATTCCTGTaGCTTGATTCTTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: KSGASGSREGMGRRPSCPTHEFL*LDSFHL
Trigger: CAAATGAAAAGAATCAAGTCACAGGAATTCATGGGT...GGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTGGAGGAGGCACAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LLLAQVLCQALLKPLEEAQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...TGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR GCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: REGMGRRPSCPTAETFSGLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWHTRRL*LQLAKL
Trigger: CAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCAGGTGTGGGTCGCCTaGCTTAGCTCCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFQVWVA*LSSRQG
Trigger: GCCCTGCCGGGAGCTAAGGCAGGCGACCCACACCTG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGCGGCCCAGAAGCACGTaGTGGAGCCAGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLRPRST*WSQASP
Trigger: GGGTGAGGCCTGGCTCCAGCACGTGCTTCTGGGCCG...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGTTCTCTGCGGGCTGCTaGGTGGGACGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWFSAGC*VGRSWA
Trigger: TGCCCAGCTCCGTCCCACCCAGCAGCCCGCAGAGAA...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSWSASS*CRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSSLSTS*KCALTS
Trigger: TGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCT...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGRRKPC*LAAAPA
Trigger: AGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCT...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCGCTCCCGCAGCGAGTaGATGCGCTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSRSRSE*MRSTSS
Trigger: GGAGCTGGTGGAGCGCATCCACTCGCTGCGGGAGCG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCTCGCGGAGTACGCCTaGTCTCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVLAEYA*SRSFCS
Trigger: GCTGCAGAAGGAGCGAGACCAGGCGTACTCCGCGAG...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCGCAGCTCGCAGACCTaGTCCGTCAGCTCGAACACC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVRSSQT*SVSSNT
Trigger: GGTGTTCGAGCTGACGGACCAGGTCTGCGAGCTGCG...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWGSACS*RSCVRS
Trigger: GCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSPPARG*TWHSGP
Trigger: CGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDPSRGD*LQAAFQ
Trigger: CTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGG...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLQDPAG*PPPHED
Trigger: GTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTG...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTCTGCTGGGGTCCAACTaGCCCCTGTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPLLGSN*PLSKDK
Trigger: TTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAG...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAACGTCCAGGAGGGCATaGGTGTTCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSTSRRA*VFFSMR
Trigger: CCTCATGGAAAAGAACACCCATGCCCTCCTGGACGT...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CHLLVDRDVDDDGEDVHPVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...AGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTCTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGLVRGY*CQASLG
Trigger: TCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAG...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
3UTR CAA 72 bp TGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGC +
Preference number: 4 (lower is better)
Translates to: CSCNSSSQEETM*ARCSSCFSRYS
Trigger: GCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR TCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGTCCTGGCTTCCTGCTTaGGCACACCCGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLSWLPA*AHPEAL
Trigger: CAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGA...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTTATAACCGTCCGTGTTaGCCTTCACAGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGYNRPC*PSQTGS
Trigger: GCTGCCTGTCTGTGAAGGTCAACACGGACGGTTATA...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGATGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRWLCPY*RCGPAS
Trigger: AGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCA...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCAVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAGGTTGCAGAGAGCTaGGATGGTGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGEVAES*DGATAF
Trigger: GAATGCAGTGGCACCATCTCAGCTCTCTGCAACCTC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTGTCTCCTCGTCCAGTaGCGTGAGTGCGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVCLLVQ*RECGVP
Trigger: AGGGACTCCGCACTCACGGCACTGGACGAGGAGACA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGCCCGCAGCGAGTGGATaGGCTCCACCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLPAASG*APPAPV
Trigger: GACAGGAGCTGGTGGAGCGCATCCACTCGCTGCGGG...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGATTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCATCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCASLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATAGGACCTCGTTGCAATaGACCTGCAGCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHRTSLQ*TCSSPL
Trigger: CAAAGGGGAGCTGCAGGTGCATTGCAACGAGGTCCT...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCATTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCALGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCGGCCCAGAAGCACGTaGTGGAGCCCTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSRPRST*WSPPSC
Trigger: GCAGGATGGAGGGCTCCAGCACGTGCTTCTGGGCCG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAAAGATGTCCATCCTGTaGAGGGTGCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRKMSIL*RVQTLS
Trigger: GGACAGTGTCTGCACCCTGCACAGGATGGACATCTT...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCGGGAAGGGGCACGGTaGATCATCGGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSREGAR*IIGGSA
Trigger: AGCAGAGCCCCCGATGATGCACCGTGCCCCTTCCCG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: AEKRWPASQHMWASASAPNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGGCGCCCCACCCGCTaGCTCTGTGCTTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWRRPTR*LCAFGH
Trigger: GTGACCAAAAGCACAGAGGCAGCGGGTGGGGCGCCT...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAATTGCAGGGATCTGTATaGAAGGTTCTCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRNRTALTGTQKPPQSRELQGSV*KVLRFA
Trigger: AGCAAACCTGAGAACCTTGCATACAGATCCCTGCAA...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCAGACACTGTCCAGCTaGACGTCCAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVQTLSS*TSRRAW
Trigger: CCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTG...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: GKTSLLSHCRNILRVSSSEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...TGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCACTTGTACGGGGGTACTaGTGCCAGGCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCALVRGY*CQASLG
Trigger: TCCCAGAGAAGCCTGGCACCAGTACCCCCGTACAAG...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGTGGGAAATCTCCCTCTaGGCACTGTCCCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWWEISL*ALSLAE
Trigger: CTCCGCGAGGGACAGTGCTCAGAGGGAGATTTCCCA...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTATAGGGCACCAGGGTaGGGCAGCTCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSYRAPG*GSSRPR
Trigger: TCTGGGCCGAGAGCTGCCTCACCCTGGTGCCCTATA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTGTGACCTGCACGTGGTaGGGGTTCAAGGTTAGACCC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVVTCTW*GFKVRP
Trigger: GGGTCTAACCTTGAACCCTCACCACGTGCAGGTCAC...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLAPGLILLLAQVLCQALKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...AAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGCCTGGAGCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCTGGTTCAGCTCCTCCTaGAGGCTGCCGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFWFSSS*RLPMAP
Trigger: TGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCA...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGAGATACAGCTCCTCCTaGAGGCTGCGGCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLRYSSS*RLRQRE
Trigger: CTCACGCTGCCGCAGCCTGCAGGAGGAGCTGTATCT...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCTCAGGGACTGCTCTTaGAATTCCAGCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHLRDCS*NSSSQE
Trigger: CTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTTACTCTTCTGGAACTaGAGCAGGGTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFLLFWN*SRVCSF
Trigger: GAAGGAACAGACCCTGCTGCAGTTCCAGAAGAGTAA...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTCCTGGCTTCCTaGTTGAGCACACCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFLVLAS*LSTPGG
Trigger: GCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACCAG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTTGGGGATGGTGCCGTaGGCGGCAGTATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVLGMVP*AAVSFM
Trigger: CATGAAGGATACTGCCGCGCACGGCACCATCCCCAA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCGTCAGGAGCCAGGCTaGTGTATAGACAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSRQEPG*CIDRAP
Trigger: GGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCACACCACCTTCTTCTaGTCGTCGGCGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWHTTFF*SSAMAW
Trigger: CCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGCTGAGGAACAGGACTaGATTAACAGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFAEEQD*INRHTE
Trigger: TTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGAGAGCCGGCCTCATGTaGCAAGGAGCCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLRAGLM*QGAHSC
Trigger: ACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCT...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLSPGRR*PRSSLE
Trigger: CTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGA...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTGCAGCTCGCACACCTaGGCCTGCAGCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSCSSHT*ACSAFT
Trigger: GGTGAATGCGCTGCAGGCCCAGGTGTGCGAGCTGCA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLARGWT*HSGPTR
Trigger: TCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCCGAGGTCGCCACTTTaGCCTCCAGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLPRSPL*PPGPGV
Trigger: TACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CCACAGAAAAGTGTGCAGTTACAAGTGGCTTCACTGTGTGTGACCTGCACGTGGTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PQKSVQLQVASLCVTCTWSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...CCACGTGCAGGTCACACACAGTGAAGCCACTTGTAACTGCACACTTTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCTAGGGAAGGCATaGGAAGACGTCCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCAVLGKA*EDVPPV
Trigger: GACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAAC...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGGAACATGGTGTCGGTaGCGTGCAGGACCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSGTWCR*RAGPRC
Trigger: GCAACGAGGTCCTGCACGTCACCGACACCATGTTCC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCTCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGSRTAS*FLDTAV
Trigger: GACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGA...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTTTGCAGGAGCTCCGTaGAGCAGGGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSFAGAP*SRVGST
Trigger: TGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LCHLLVDRDVDDDGEDVHQGSQV*FCRSSV
Trigger: CACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTG...ATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCGCACACCTGGGCCTaGAGCGCATTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSSHTWA*SAFTFS
Trigger: GGAGAAGGTGAATGCGCTGCAGGCCCAGGTGTGCGA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCGCTCGAACACCTGCCTaGGGAGGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFARTPA*GGSPSP
Trigger: TGGAGAAGGACTCCCTCCGCAGGCAGGTGTTCGAGC...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWSSWGW*RARQYP
Trigger: AGGATACTGCCGCGCACGGCACCATCCCCAACTACT...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTTGCGGGTCACGGTaGACTGCTGAGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLACGSR*TAESCP
Trigger: AGGACATGACTCAGCAGTGCACCGTGACCCGCAAGC...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCATCATCGGGGGCTCTaGTCCGTCCACACCACCTTC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFHHRGL*SVHTTF
Trigger: GAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: DVDDDGEDVHPVQGADTVNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...GACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: ETWMTMGKMSILCRVQTLNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...CAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACTAATTTTTCTCCACTaGTCACAGAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRLIFLH*SQSCSH
Trigger: GTGGCTGCAGCTCTGTGAGCAGTGGAGAAAAATTAG...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCGCTGTCGTCTCTaGGGCAGATGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWSRCRL*GRWHAS
Trigger: GGATGCATGCCATCTGCCCCAGAGACGACAGCGACT...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCTCAACCATCACAATCTaGGTGCCCGGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFSTITI*VPGRKA
Trigger: GGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTGA...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTTCGTTGACAGAGACGTaGATGACGATGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGSLTET*MTMGKM
Trigger: CATCTTCCCCATCGTCATCCACGTCTCTGTCAACGA...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCTTAGACCCCAGCCAGTaGGGAGAGCCGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFLDPSQ*GEPASC
Trigger: ACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTGGCCCAAGAAGGGCTaGGGTGCAAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSWPKKG*GAKPGQ
Trigger: CTGACCTGGCTTTGCACCCCAGCCCTTCTTGGGCCA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTAGGTCCGACAAGAGCTaGGACTCTGTGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSRSDKS*DSVELT
Trigger: CGTCAGCTCCACAGAGTCTCAGCTCTTGTCGGACCT...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTTGAACAAGGGCTCTaGGGCTTCGTAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: FAIFSLTETWMTMGKMSILEQGL*GFVINH
Trigger: ATGGTTGATTACGAAGCCTCAGAGCCCTTGTTCAAG...GATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR TCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAAGCCTGGTAAAGGGTaGAGATGTTTCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFKPGKG*RCFHRK
Trigger: TTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTT...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCACACCTCATGGAAGTGTaGGCTAACCTCACGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCAHLMEV*ANLTLH
Trigger: ATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTG...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWARCSS*FSRYSS
Trigger: GGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTGCTGTCCTCAGGGACTaGTCTTGCAATTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVAVLRD*SCNSSS
Trigger: TGAGCTGGAATTGCAAGAGCAGTCCCTGAGGACAGC...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCCGATGACGCTGATCTaGTCCAGCAATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFPMTLI*SSNASP
Trigger: GGGGGATGCATTGCTGGAGCAGATCAGCGTCATCGG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCGTTGCAATGCACCTaGAGCTCCCCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSSLQCT*SSPLAL
Trigger: CAGGGCCAAAGGGGAGCTGCAGGTGCATTGCAACGA...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGCGGTGGCTCACGCCTaGAATCCAGCACTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSAVAHA*NPALSE
Trigger: CTCTGAAAGTGCTGGATTGCAGGCGTGAGCCACCGC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTACGATCCTGTGGCGGTaGCTCTCCATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSTILWR*LSIISH
Trigger: GTGGGAGATGATGGAGAGCCACCGCCACAGGATCGT...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCAGCGTACGATCCTGTaGCGGTGGCTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFQRTIL*RWLSII
Trigger: GATGATGGAGAGCCACCGCCACAGGATCGTACGCTG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGCTCATAATCCAGGTGTaGGTCGCCTGCCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWLIIQV*VACLSS
Trigger: GGAGCTAAGGCAGGCGACCCACACCTGGATTATGAG...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCAGCAATGCATCCCCCTaGAACGCCAGCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFSNASP*NASMVT
Trigger: GGTCACCATGCTGGCGTTCCAGGGGGATGCATTGCT...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLWSSWG*CRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCA...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGAGAGGCTGGACCACTaGAGACAGATGCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWERLDH*RQMPLA
Trigger: TGCAAGAGGCATCTGTCTCCAGTGGTCCAGCCTCTC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGCAAAGCCCAGTGTGGTaGCAGCTGCCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLQSPVW*QLPPFS
Trigger: AGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTG...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTAGCAGCACCTCCTTCTaGCCCTTTTCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSSSTSF*PFSWFS
Trigger: GCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCT...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGTCTCCTGCAGCGCATTaGTATAGTGCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLSPAAH*YSAARG
Trigger: GCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGA...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGATGGTGTCGGTGACGTaGAGGACCTCGTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLMVSVT*RTSLQC
Trigger: GCATTGCAACGAGGTCCTGCACGTCACCGACACCAT...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp GAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGATTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: EDVPPVPLQKHSQGFQFRFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...TCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGCCTCATACTCCTCCTaGCTCAAGTACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLASYSS*LKYSAR
Trigger: CCTGGCAGAGTACTTGAGCCAGGAGGAGTATGAGGC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp TGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTTTGATTCTTTTCATTTaGAAGGAGAGGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: CHLLVDRDVDDDGEDVHPLILFI*KERLDH
Trigger: GTGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAA...AGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650867.1
CDS-3UTR TCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCTGGCTTTGTCCATACTaGCGATGCGGACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFWLCPY*RCGPAS
Trigger: AGAAGCTGGTCCGCATCGTCAGTATGGACAAAGCCA...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTTCTAGAACAGCTTCCTaGTTCTTGGACACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVSRTAS*FLDTAV
Trigger: GACAGCAGTGTCCAAGAATCAGGAAGCTGTTCTAGA...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR TCA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTAGCCTGCCAACATGGTaGAACCCCATTTCTACTAGA +
Preference number: 4 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVSLPTW*NPISTR
Trigger: TCTAGTAGAAATGGGGTTTCACCATGTTGGCAGGCT...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR GCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGTCCCTCCTGTCCCACTaGAGAAACATTCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWSLLSH*RNILRV
Trigger: AACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGA...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCGATTTGAATCGGGCCTaGAGACAGGCGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFDLNRA*RQAVFQ
Trigger: CTGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATC...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAATGTAAAAGGGAAGTaGAGCCCCCATAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGNVKGK*SPHRFE
Trigger: TTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR GCA 90 bp TCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTCTGATTCTTGGACACTaGTGTCAAAATGACATTCAG +
Preference number: 4 (lower is better)
Translates to: SHCRNILRVSSSDHAKPGLILGH*CQNDIQ
Trigger: CTGAATGTCATTTTGACAGCAGTGTCCAAGAATCAG...ACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCGCCATCTTACTCTTCTaGAACTGCAGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFAILLF*NCSRVC
Trigger: ACAGACCCTGCTGCAGTTCCAGAAGAGTAAGATGGC...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCGAAGCTGAGAAAAGGTaGCCAGCGTCACAGCATATG +
Preference number: 4 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFEAEKR*PASQHM
Trigger: CATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTC...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CCA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCATTGATTCTTTTCATTTaGAAGGAGAGGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCALILFI*KERLDH
Trigger: GTGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAA...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGACACTGCTGTCAAAATaGCATTCAGTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWTLLSK*HSVCNS
Trigger: GCTGTTGCAGACTGAATGTCATTTTGACAGCAGTGT...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR GCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGTTCCACAGAAAAGTGTaGAGTTACAAGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLFHRKV*SYKWLH
Trigger: GTGAAGCCACTTGTAACTGCACACTTTTCTGTGGAA...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR TCA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGACCCATGAATTCCTGTaGCTTGATTCTTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLTHEFL*LDSFHL
Trigger: CAAATGAAAAGAATCAAGTCACAGGAATTCATGGGT...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PQPVGRAGLMCQGAHSCAARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...GGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RARVAATLGTTQAPHPLPRVRWA*YGGTGA
Trigger: GGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCT...AGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTTGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS TCA 90 bp CCTCGTCCAGCTGGCACAGCACCTTGGCCTGGCGCAGGTAGGGGGTaGGGCGGCTGGGGCAGATGCAGCGTACGATCCTGTGGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: PRPAGTAPWPGAGRG*GGWGRCSVRSCGGG
Trigger: GCCACCGCCACAGGATCGTACGCTGCATCTGCCCCAGCCGCCTCACCCCCTACCTGCGCCAGGCCAAGGTGCTGTGCCAGCTGGACGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575465.6
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 90 bp AGCAAGTGCCCGGCCCGCATGGCGCTGTTGGTGAGCCGGGGGCTGTaGAGCACCTCCTCCTCGTCCAGCTGGCACAGCACCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SKCPARMALLVSRGL*STSSSSSWHSTLAW
Trigger: CCAGGCCAAGGTGCTGTGCCAGCTGGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGCCGGGCACTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp GCACGGCTCACCATCACAATCTGGGTGCCCGGGCGCAAGGCCATCTaGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: ARLTITIWVPGRKAI*SAAEPGVTRWMKMP
Trigger: GGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGTGAGCCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS-3UTR CAA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ASQHMWASASAPGKGGSDARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS CCA 90 bp TGTGCGCTAACCTCACGCTTCATGCGGCTGTGGTCAGCCTCCAGCTaGTGCAGGCCCTCGGCACGGGTCTCGGCCAGGCCCAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: CALTSRFMRLWSASS*CRPSARVSARPRCS
Trigger: GGAGCACCTGGGCCTGGCCGAGACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCGTGAGGTTAGCGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp GGGGCGCGGGGCTGCTGGAGCGGAAGCTGTCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCGACAAGAGCTGAGACTCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GARGCWSGSCPPARG*TWHSGPTRAETLWS
Trigger: GCTCCACAGAGTCTCAGCTCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGGACAGCTTCCGCTCCAGCAGCCCCGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp CCCCTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTGCTGCTTACCTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PLERQHGDLAQDPAG*PPPHEDAAAAYLSE
Trigger: CTCGGAGAGGTAAGCAGCAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS CCA 90 bp CCCCTGGAACGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTGCCGTGTCTAGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: PLERQHGDLAQDPAG*PPPHEDAAAVSRSS
Trigger: TGAGCTCCTAGACACGGCAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCGTTCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649277.1
CDS-3UTR CAA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CSRCLSAATARSRSEWMRQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...GCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS CCA 90 bp GCAGGGTGGGGTCCACAGTCCCCGCAGTGTCTCCAAAGCCCAGTGTaGTGCCAGCTGCCTCCTTTCTCTGCGGGCTGCTGGGTGGGACGG +
Preference number: 5 (lower is better)
Translates to: AGWGPQSPQCLQSPV*CQLPPFSAGCWVGR
Trigger: CCGTCCCACCCAGCAGCCCGCAGAGAAAGGAGGCAGCTGGCACCACACTGGGCTTTGGAGACACTGCGGGGACTGTGGACCCCACCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571427.1
ENST00000573489.5
ENST00000573882.5
ENST00000575465.6
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS-3UTR CAA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MWASASAPGKGGSDLGDHSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS TCA 90 bp CTGGGCAGAAGGAAGAGCCTGTGTCGGCTGAGCCCCTCCGTAGGCTaGGCCCTCCGTAGGCTGACCTGCTCTTCGCCGGATGGACTGCGC +
Preference number: 5 (lower is better)
Translates to: LGRRKSLCRLSPSVG*ALRRLTCSSPDGLR
Trigger: GCGCAGTCCATCCGGCGAAGAGCAGGTCAGCCTACGGAGGGCTCAGCCTACGGAGGGGCTCAGCCGACACAGGCTCTTCCTTCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650806.1
ENST00000651672.1
CDS GCA 90 bp GAGCTGACGAGGCTGCAGTCGCTGTCGTCTCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGCTTCTCCCGTGGACAGGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: ELTRLQSLSSLGQMA*IRTSRCFSRGQGSL
Trigger: CAGGGAGCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACGACAGCGACTGCAGCCTCGTCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp GTCCTGGCTTCCTGCTTGAGCACACCCGGAGGCTCTGCCTGCAGCTaGCGAAGCTGTGTGCGCAGCTCGCAGACCTGGTCCGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: VLASCLSTPGGSACS*RSCVRSSQTWSVSS
Trigger: CGAGCTGACGGACCAGGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp TCTGGGGCAGATGGCATGCATCCGCACCAGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCTGGCTTCCTGCTTGAGCACACCCGG +
Preference number: 5 (lower is better)
Translates to: SGADGMHPHQPLLLP*TGLPGPGFLLEHTR
Trigger: CCGGGTGTGCTCAAGCAGGAAGCCAGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp CACTTTCCTGTCATCACAATCTGGGTGCCCGGGCGCAAGGCCATCTaGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: HFPVITIWVPGRKAI*SAAEPGVTRWMKMP
Trigger: GGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGACAGGAAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CAA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GGQRHSICGLLPLPRARVSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HRQAAEAVHPPEKPHGLLSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...GAGGAGGCCGTGGGGCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CAA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: GGQRHSICGLLPLPRARVPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AAGGGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: KGGSDLGDHPGAPPAASVAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...CACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCC +
Preference number: 5 (lower is better)
Translates to: GGQRHSICGLLPLPRARVRVRWA*YGGTGA
Trigger: GGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCT...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS GCA 90 bp TCGCTGTCGTCTCTGGGGCAGATGGCATGCATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGCTCCCTGGTCCTGGCTTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SLSSLGQMACIRTSR*FSRGQGSLVLASCL
Trigger: CAAGCAGGAAGCCAGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACGACAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp AGCACCTCATGGAAGTGTGCGCTAACCTCACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGCAGGCCCTCGGCACGGGTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: STSWKCALTSRFMRL*SASSWCRPSARVSA
Trigger: GGCCGAGACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp GTGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTaGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGG +
Preference number: 5 (lower is better)
Translates to: VGLSGDAPSSRQLLT*SSWGWCRARQYPSW
Trigger: CCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGCGTCCCCAGAGAGGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS CCA 90 bp CCTCTTATAACCATCACAATCTGGGTGCCCGGGCGCAAGGCCATCTaGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: PLITITIWVPGRKAI*SAAEPGVTRWMKMP
Trigger: GGGCATCTTCATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGTTATAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571450.1
CDS-3UTR CAA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CAA 90 bp CCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PGPPVLGKAWEDVPPVPLVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...CAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCACACCACCTTCTTCTGCTCGTCGGCGATGGCCTGGCGGACACAGCTGAGCAGTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PHHLLLLVGDGLADTAEQSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...CTGCTCAGCTGTGTCCGCCAGGCCATCGCCGACGAGCAGAAGAAGGTGGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: RWPASQHMWASASAPGKGPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS GCA 90 bp ATTTCCCTGTGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTaGTCACCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATC +
Preference number: 5 (lower is better)
Translates to: ISLWASLGTHRARGS*SPGVVGDGAVRGSI
Trigger: GATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGCGTCCCCAGAGAGGCCCACAGGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS CCA 90 bp TCTGGGGCAGATGGCATGCATCCGCACCAGCCGCTGCTTCTCCCGTaGACAGGGCTCCCTGGTCCTGGCTTCCTGCTTGAGCTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SGADGMHPHQPLLLP*TGLPGPGFLLELPK
Trigger: CTTTGGCAGCTCAAGCAGGAAGCCAGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000649277.1
CDS CCA 90 bp CCTACTGTGTGCAAGGCCCAAGGCTGGGAGCCGGTCGCGCCGAGGTaGAAAGGATTAAGGCACCCACCCATGACGGGCCCATGGACTTGG +
Preference number: 5 (lower is better)
Translates to: PTVCKAQGWEPVAPR*KGLRHPPMTGPWTW
Trigger: CCAAGTCCATGGGCCCGTCATGGGTGGGTGCCTTAATCCTTTCCACCTCGGCGCGACCGGCTCCCAGCCTTGGGCCTTGCACACAGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS-3UTR CAA 90 bp TCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACAGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SSWTSRRAWVFFSMRDSTARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...TGTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp GCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ASQHMWASASAPGKGGSDQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...GTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGQRHSICGLLPLPRARVQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TGCTCTCGCTGCCTCTCGGCAGCCACGGCCCGCTCCCGCAGCGAGTGGATGCGCCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: CSRCLSAATARSRSEWMRLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...GCGCATCCACTCGCTGCGGGAGCGGGCCGTGGCTGCCGAGAGGCAGCGAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CAA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LDPSQWGEPASCAKEPTAVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EKSGASGSREGMGRRPSCPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CAA 90 bp GCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: AYVGFCLCPGQGWQRPWGRRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...TCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: GQRHSICGLLPLPRARVARRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGGAGACAGATGCCTCTaGCAGGGATCTGTATGCAAG +
Preference number: 5 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLGDRCL*QGSVCK
Trigger: CTTGCATACAGATCCCTGCAAGAGGCATCTGTCTCC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS TCA 90 bp CCAGGGAGCAGCCTGCCAGGGTCGACGGCTGCAAGTCTCACTCTGTaGACCACACAGCAGAGCCAGGGCCAGCAGAGACCTGAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: PGSSLPGSTAASLTL*TTQQSQGQQRPESS
Trigger: GGAACTCTCAGGTCTCTGCTGGCCCTGGCTCTGCTGTGTGGTTCACAGAGTGAGACTTGCAGCCGTCGACCCTGGCAGGCTGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 90 bp GGACACCAGCAGACAGAGCGCAGCCGGCCTTTGGCTTACGCTGGCTaGCAGGCGGGACTTTCCCAAAGTGCAAGGTCGAGGCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: GHQQTERSRPLAYAG*QAGLSQSARSRPRS
Trigger: TGACCTTGGCCTCGACCTTGCACTTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTGCTGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS-3UTR CAA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: SICGLLPLPRARVAATLGRHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: GQRHSICGLLPLPRARVARHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGACCACCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: MWASASAPGKGGSDLGDHPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...GTGGTCCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAATCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ASGSREGMGRRPSCPTAESSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GGQRHSICGLLPLPRARVSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCATCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GQRHSICGLLPLPRARVASSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...TGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTCGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: LDPSQWGEPASCAKEPTARRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...AGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGAAGGGGCACGGTGCATCATCGGGGGCTCTGCTCCGTCCACACCACCTTCTTCCGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: GRGTVHHRGLCSVHTTFFRRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...GAAGAAGGTGGTGTGGACGGAGCAGAGCCCCCGATGATGCACCGTGCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGCGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGRRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCAGCGACCTTGGGGACCACCCAGGCGCCCCACCCGCTGCCTCTGTGCTTGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GGSDLGDHPGAPPAASVLALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...AAGCACAGAGGCAGCGGGTGGGGCGCCTGGGTGGTCCCCAAGGTCGCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCACAGCTGTGCCAAGGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: QPVGRAGLMCQGAHSCAKAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...CTTGGCACAGCTGTGGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: PASQHMWASASAPGKGGSAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...GCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS TCA 90 bp AGGCAGGAGGCCGCTCTCTGCTGCGGGGACCGGAACCTACCAGGCTaGAAGTCAGCGAGCGCAGTTTCTCATTCTCCTCCTTCAGGCGGT +
Preference number: 5 (lower is better)
Translates to: RQEAALCCGDRNLPG*KSASAVSHSPPSGG
Trigger: ACCGCCTGAAGGAGGAGAATGAGAAACTGCGCTCGCTGACTTTCAGCCTGGTAGGTTCCGGTCCCCGCAGCAGAGAGCGGCCTCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572838.1
ENST00000652599.1
CDS GCA 90 bp ACGCGGGACCGGGGCTGTTCAGACAGCAAAGCTCCTGTGTTGACTTaGAGTCTGTGTGCAGGGCCCTGGCCTTCCAGGGACTATCCCACC +
Preference number: 5 (lower is better)
Translates to: TRDRGCSDSKAPVLT*SLCAGPWPSRDYPT
Trigger: GGTGGGATAGTCCCTGGAAGGCCAGGGCCCTGCACACAGACTGCAAGTCAACACAGGAGCTTTGCTGTCTGAACAGCCCCGGTCCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 90 bp GCATTTCTGTGTGGCCGCAATCACTGGCACTGGCCAGCAGCTGCCTaGTCCTTACCCCAGACTCCTCTGCTTCCCAGCTGGTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: AFLCGRNHWHWPAAA*SLPQTPLLPSWWWQ
Trigger: CTGCCACCACCAGCTGGGAAGCAGAGGAGTCTGGGGTAAGGAGCAGGCAGCTGCTGGCCAGTGCCAGTGATTGCGGCCACACAGAAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 90 bp ACCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATaGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: TWSSWGWCRARQYPS*CKSSRGGHASSRSP
Trigger: AGGGCTGCGGCTGCTGGCATGCCCACCGCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS CCA 90 bp ACAAGGACACCAGCAGACAGAGCGCAGCCGGCCTTTGGCTTACGCTaGCTGGCAGGCGGGACTTTCCCAAAGTGCAAGGTCGAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: TRTPADRAQPAFGLR*LAGGTFPKCKVEAK
Trigger: CTTGGCCTCGACCTTGCACTTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTGCTGGTGTCCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS-3UTR CAA 90 bp TCCAGGGGAGACTGGCTGCAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTGTCAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: SRGDWLQAAFQLRKVCRVRHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...GACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575500.5
CDS-3UTR CAA 90 bp AAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: KVASVTAYVGFCLCPGQGRHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...CCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CAA 90 bp TCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SCAGCRHCPAGRPGGHGCQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...ACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp GGGGAAGGCAGAGTCCGCTGGGCCTTGTACGGGGGTACTGGTGCCAGGCTTCTCCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: GEGRVRWALYGGTGARLLPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...GAGAAGCCTGGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCTGCCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS-3UTR CAA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: AEKRWPASQHMWASASAPVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCACCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: NRTALTGTQKPPQSREGAPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: KMSILCRVQTLSSWTSRRPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...CCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: RSLQPSGARLLYRQGARSRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCC +
Preference number: 5 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVRVRWA*YGGTGA
Trigger: GGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCT...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS GCA 90 bp GCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCACGCGGT +
Preference number: 5 (lower is better)
Translates to: APSSRQLLTWSSWGW*RARQYPSWCKSSRG
Trigger: ACCGCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS GCA 90 bp GCTGTGCCTCGCCTCAGCCTGGCACCACTAAGCCACCCTGCCTGCTaGCTTCTGAAACCACTGGGAAGCCCAAGCGTTACAGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: AVPRLSLAPLSHPAC*LLKPLGSPSVTDQS
Trigger: GCTCTGATCTGTAACGCTTGGGCTTCCCAGTGGTTTCAGAAGGCAGCAGGCAGGGTGGCTTAGTGGTGCCAGGCTGAGGCGAGGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 90 bp CACGCTGTGCCTCGCCTCAGCCTGGCACCACTAAGCCACCCTGCCTaGTGCCTTCTGAAACCACTGGGAAGCCCAAGCGTTACAGATCAG +
Preference number: 5 (lower is better)
Translates to: HAVPRLSLAPLSHPA*CLLKPLGSPSVTDQ
Trigger: CTGATCTGTAACGCTTGGGCTTCCCAGTGGTTTCAGAAGGCAGCAGGCAGGGTGGCTTAGTGGTGCCAGGCTGAGGCGAGGCACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 90 bp TGGCCATGGGGTGAATTCCAAATGGGGAGCAAAGCACCTACTGTGTaGAAGGCCCAAGGCTGGGAGCCGGTCGCGCCGAGGTGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: WPWGEFQMGSKAPTV*KAQGWEPVAPRWKG
Trigger: TCCTTTCCACCTCGGCGCGACCGGCTCCCAGCCTTGGGCCTTGCACACAGTAGGTGCTTTGCTCCCCATTTGGAATTCACCCCATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 90 bp GCTGCTTACCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTaGAGGCTGCTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: AAYLSETSSLPGETG*RLLSSCGRSAVSRS
Trigger: GCTCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGGTAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS GCA 90 bp AGATGGCGGCAACTGCACGGTCAGGTGTGTGGACGGATGCAGTCTTaGCACTCTACACCGGGCAGGAGAGAAGCCACGGAAAAGCCACCC +
Preference number: 5 (lower is better)
Translates to: RWRQLHGQVCGRMQS*HSTPGRREATEKPP
Trigger: GGGTGGCTTTTCCGTGGCTTCTCTCCTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 90 bp GACAGCAAAGCTCCTGTGTTGACTTGCAGTCTGTGTGCAGGGCCCTaGCCTTCCAGGGACTATCCCACCAGGTCCTGCTGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DSKAPVLTCSLCAGP*PSRDYPTRSCWPPS
Trigger: GGAAGGAGGCCAGCAGGACCTGGTGGGATAGTCCCTGGAAGGCCAGGGCCCTGCACACAGACTGCAAGTCAACACAGGAGCTTTGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS CCA 90 bp GACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCACGC +
Preference number: 5 (lower is better)
Translates to: DAPSSRQLLTWSSWG*CRARQYPSWCKSSR
Trigger: GCGTGAACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS CCA 90 bp TCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTaGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: SGDAPSSRQLLTWSS*GWCRARQYPSWCKS
Trigger: ACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGCGTCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS-3UTR CAA 90 bp AGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RKGGQRHSICGLLPLPRAQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...TGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GAGCCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EPWSSWGWCRARQYPSWCQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...ACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp AGAAGATGGCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRWLAGHGALLSHVLDEGVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...GCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACCCGCAAGCCATCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp AGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SHVLDEGYELLLSPGVVGSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...CCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp CCTGCTGGGGTCCAACTGGCCCCTGTCAAAGGACAAACGCAGAGGGCTGGCCTTTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PAGVQLAPVKGQTQRAGLSSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...AAGGCCAGCCCTCTGCGTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp CATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGGAGTAGTTGGGGATCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HVLDEGYELLLSPGVVGDPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...ATCCCCAACTACTCCAGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp CTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LCGAFTPLVMRATHSAGQPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...CTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CAA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: REGMGRRPSCPTAETFSGPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLRNRTALTGTQKPPQSRTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...CCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ASGSREGMGRRPSCPTAETCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGCGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: AEKRWPASQHMWASASAPRRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCGGTCCTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: RSLQPSGARLLYRQGARSFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...GGACCGGGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGAGAGTCCGCTGGGCCTaGTACGGGGGTACTGGTGCC +
Preference number: 5 (lower is better)
Translates to: REGMGRRPSCPTAETFSGRVRWA*YGGTGA
Trigger: GGCACCAGTACCCCCGTACAAGGCCCAGCGGACTCT...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000651672.1
CDS TCA 90 bp GCTGCTTCTCCCGTGGACAGGGCTCCCTGGTCCTGGCTTCCTGCTTaGGCTGCCAAAGACAGGCCAGACAGGCTGGTTAATTCGGGAAAG +
Preference number: 5 (lower is better)
Translates to: AASPVDRAPWSWLPA*AAKDRPDRLVNSGK
Trigger: CTTTCCCGAATTAACCAGCCTGTCTGGCCTGTCTTTGGCAGCTCAAGCAGGAAGCCAGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000649277.1
CDS GCA 90 bp GAGGCTGAGCATCTCGTCCTTCAGCCTCAGCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCATGCGGCTGTGGTCAGCCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: EAEHLVLQPQHLMEV*ANLTLHAAVVSLQL
Trigger: CAGCTGGAGGCTGACCACAGCCGCATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCTGAAGGACGAGATGCTCAGCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 90 bp GCAAGGTCGAGGCCAAGGTCAAGGCCCAGGGCAGAAGTTGAGCTCTaGTTCTATCTGCCCTTTCCCTGGAGAGAGGCCCCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: ARSRPRSRPRAEVEL*FYLPFPWREAPAFS
Trigger: TGAGAAAGCCGGGGCCTCTCTCCAGGGAAAGGGCAGATAGAAGCAGAGCTCAACTTCTGCCCTGGGCCTTGACCTTGGCCTCGACCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 90 bp ATGTCACGCTGTGCCTCGCCTCAGCCTGGCACCACTAAGCCACCCTaGCTGCTGCCTTCTGAAACCACTGGGAAGCCCAAGCGTTACAGA +
Preference number: 5 (lower is better)
Translates to: MSRCASPQPGTTKPP*LLPSETTGKPKRYR
Trigger: TCTGTAACGCTTGGGCTTCCCAGTGGTTTCAGAAGGCAGCAGGCAGGGTGGCTTAGTGGTGCCAGGCTGAGGCGAGGCACAGCGTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 90 bp TCCCGAGAAGATGGCGGCAACTGCACGGTCAGGTGTGTGGACGGATaGAGTCTTGCCACTCTACACCGGGCAGGAGAGAAGCCACGGAAA +
Preference number: 5 (lower is better)
Translates to: SREDGGNCTVRCVDG*SLATLHRAGEKPRK
Trigger: TTTCCGTGGCTTCTCTCCTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCTTCTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 90 bp GAGGCCTGCCCTAGGCAAGCAGAATCCCGAGAAGATGGCGGCAACTaGACGGTCAGGTGTGTGGACGGATGCAGTCTTGCCACTCTACAC +
Preference number: 5 (lower is better)
Translates to: EACPRQAESREDGGN*TVRCVDGCSLATLH
Trigger: GTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCTTCTCGGGATTCTGCTTGCCTAGGGCAGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 90 bp TGCAGCGAGAGGCTGAGCATCTCGTCCTTCAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCACGCTTCATGCGGCTGTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: CSERLSISSFSLSTS*KCALTSRFMRLWSA
Trigger: GGCTGACCACAGCCGCATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp GCTGCCTGCTCCTTACCCCAGACTCCTCTGCTTCCCAGCTGGTGGTaGCAGGTCTCTGAGTTGTCAATCCTAGGACTAGAGGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: AACSLPQTPLLPSWW*QVSELSILGLEAPQ
Trigger: CTGGGGAGCCTCTAGTCCTAGGATTGACAACTCAGAGACCTGCCACCACCAGCTGGGAAGCAGAGGAGTCTGGGGTAAGGAGCAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS-3UTR CAA 90 bp TCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGASGSREGMGRRPSCPTFSGLL*QELRAA
Trigger: TGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAA...AGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPFSGLL*QELRAA
Trigger: TGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAA...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: RWPASQHMWASASAPGKGFSGLL*QELRAA
Trigger: TGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAA...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: ASGSREGMGRRPSCPTAERHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TWMTMGKMSILCRVQTLSVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...GGACAGTGTCTGCACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PWSSWGWCRARQYPSWCKTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GGQRHSICGLLPLPRARVALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...CACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTGGCAGCGACCTTGGGGGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: SICGLLPLPRARVAATLGALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...CCCCAAGGTCGCTGCCACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GAGAAGTCCGGGGCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTAGGCAGGCAGATCACTaGAGGTCAGAGTTCGAGACC +
Preference number: 5 (lower is better)
Translates to: EKSGASGSREGMGRRPSCRQADH*RSEFET
Trigger: GGTCTCGAACTCTGACCTCAAGTGATCTGCCTGCCT...ACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGCCCCGGACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS-3UTR CAA 90 bp TCAAGGTTAGACCCCAGCCAGTGGGGAGAGCCGGCCTCATGTGCCAAGGAGCCCGGAGACAGATGCCTCTaGCAGGGATCTGTATGCAAG +
Preference number: 5 (lower is better)
Translates to: SRLDPSQWGEPASCAKEPGDRCL*QGSVCK
Trigger: CTTGCATACAGATCCCTGCAAGAGGCATCTGTCTCC...GGGCTCCTTGGCACATGAGGCCGGCTCTCCCCACTGGCTGGGGTCTAACCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS TCA 90 bp CCAGCTCCTTCTCCTGCAGCGCATTGCTATAGTGCAGCGAGAGGCTaGGCATCTCGTCCTTCAGCCTCAGCACCTCATGGAAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: PAPSPAAHCYSAARG*ASRPSASAPHGSVR
Trigger: GCGCACACTTCCATGAGGTGCTGAGGCTGAAGGACGAGATGCTCAGCCTCTCGCTGCACTATAGCAATGCGCTGCAGGAGAAGGAGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS TCA 90 bp CTTACCCCAGACTCCTCTGCTTCCCAGCTGGTGGTGGCAGGTCTCTaGGTTGTCAATCCTAGGACTAGAGGCTCCCCAGGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: LTPDSSASQLVVAGL*VVNPRTRGSPGSPK
Trigger: CTTGGGAGACCCTGGGGAGCCTCTAGTCCTAGGATTGACAACTCAGAGACCTGCCACCACCAGCTGGGAAGCAGAGGAGTCTGGGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 90 bp AGGGAAAAACACAAGGACACCAGCAGACAGAGCGCAGCCGGCCTTTaGCTTACGCTGGCTGGCAGGCGGGACTTTCCCAAAGTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: REKHKDTSRQSAAGL*LTLAGRRDFPKVQG
Trigger: ACCTTGCACTTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTGCTGGTGTCCTTGTGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 90 bp CCAGCAGCTGCCTGCTCCTTACCCCAGACTCCTCTGCTTCCCAGCTaGTGGTGGCAGGTCTCTGAGTTGTCAATCCTAGGACTAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PAAACSLPQTPLLPS*WWQVSELSILGLEA
Trigger: AGCCTCTAGTCCTAGGATTGACAACTCAGAGACCTGCCACCACCAGCTGGGAAGCAGAGGAGTCTGGGGTAAGGAGCAGGCAGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 90 bp TGTTGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCTGTGCGGTaGGGAGGCGACAGGAAGGGCGATGGAAACAGCTTCTCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: CWLAAAPASVDTAVR*GGDRKGDGNSFSPD
Trigger: ATCAGGGGAGAAGCTGTTTCCATCGCCCTTCCTGTCGCCTCCCCACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS CCA 90 bp AAGCAGAATCCCGAGAAGATGGCGGCAACTGCACGGTCAGGTGTGTaGACGGATGCAGTCTTGCCACTCTACACCGGGCAGGAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: KQNPEKMAATARSGV*TDAVLPLYTGQERS
Trigger: GCTTCTCTCCTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCTTCTCGGGATTCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS-3UTR CAA 90 bp GCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCCCTGGGCTGTGGCCAAGAAGGCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: ARCSSCFSRYSPGLWPRRPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...CCTTCTTGGCCACAGCCCAGGGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CAA 90 bp GGGCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: GPGLRNRTALTGTQKPPQPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...CTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCCTCCGGTTCTAGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAACCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: ASGSREGMGRRPSCPTAEPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...TTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCTAGAACCGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGGCATCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: NRTALTGTQKPPQSREGASSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...TGCCCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ATGGGTGTTCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGTCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: MGVLFHEGLHSMAGHPAASSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...CGCTGCTGGGTGACCCGCCATGCTGTGGAGTCCCTCATGGAAAAGAACACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCAACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGCAAGGGTTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: RWPASQHMWASASAPGKGFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...ACCCTTGCCCGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCGTCCAGGTCGCTCCAGCCGTCAGGAGCCAGGCTGCTGTATAGACAGGGCGCCCTTGATTCTTTTCATTaGGAAGGAGAGGCTGGACCA +
Preference number: 5 (lower is better)
Translates to: PSRSLQPSGARLLYRQGALDSFH*EGEAGP
Trigger: TGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAAG...GGCGCCCTGTCTATACAGCAGCCTGGCTCCTGACGGCTGGAGCGACCTGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650867.1
CDS TCA 90 bp CAAAGACCCCTGGTCAGAAGCGCCGCATGGCAGCAGCACCACGGGTaGCATGCTGGGTTCTGCACGGCACGACTCTCATCTATAAATGAG +
Preference number: 5 (lower is better)
Translates to: QRPLVRSAAWQQHHG*HAGFCTARLSSINE
Trigger: CTCATTTATAGATGAGAGTCGTGCCGTGCAGAACCCAGCATGTCACCCGTGGTGCTGCTGCCATGCGGCGCTTCTGACCAGGGGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 90 bp TGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTaGAGCTCCTGCTTCAGTAGATACAGCTGGGAACGCGGGACCGGG +
Preference number: 5 (lower is better)
Translates to: CSCNSSSQEETMLAR*SSCFSRYSWERGTG
Trigger: CCCGGTCCCGCGTTCCCAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 90 bp AATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTGTGCGGTGGGGAGGCGACAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: NSSSQEETMLARCSS*FSRYSCAVGRRQEG
Trigger: CCCTTCCTGTCGCCTCCCCACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS GCA 90 bp ACCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTGGCTGCAGGCTaGTTTCCAGCTGCGGAAGGTCTGCCGTGTCTAGGAGCTCATAAT +
Preference number: 5 (lower is better)
Translates to: TSPRHQAFQGRLAAG*FPAAEGLPCLGAHN
Trigger: ATTATGAGCTCCTAGACACGGCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS GCA 90 bp CACCGTCCACAGATTCAAAAAGTAAAATCAAGTCAGAGCTCCTCCTaGAGGCTGCGGCAGCGTGAGGCGGCCAGCTCCTTCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: HRPQIQKVKSSQSSS*RLRQREAASSFSCS
Trigger: GCTGCAGGAGAAGGAGCTGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGCTCTGACTTGATTTTACTTTTTGAATCTGTGGACGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS CCA 90 bp GCGCCGAGGTGGAAAGGATTAAGGCACCCACCCATGACGGGCCCATaGACTTGGGAAGCAGAGAGGGCCGGTCCAATCACAAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: APRWKGLRHPPMTGP*TWEAERAGPITNRN
Trigger: ATTTCTGTTTGTGATTGGACCGGCCCTCTCTGCTTCCCAAGTCCATGGGCCCGTCATGGGTGGGTGCCTTAATCCTTTCCACCTCGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS-3UTR CAA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CAA 90 bp GGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: GALLSHVLDEGYELLLSPPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...AGGGCTCAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: NQSLCGAFTPLVMRATHSVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...ACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CAA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAATCCTCCAGGACTGCCTaGAACAAGGGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LRNRTALTGTQKPPQSRESSRTA*NKGSEA
Trigger: AGCCTCAGAGCCCTTGTTCAAGGCAGTCCTGGAGGA...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCCGAGGTCGCCACTTaGGCCTCCAGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVPEVAT*ASRSWS
Trigger: ACTCCAGGACCTGGAGGCCAAAGTGGCGACCTCGGG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGCCTCTGCCCCGGGAGACAGATGCCTCTaGCAGGGATCTGTATGCAAG +
Preference number: 5 (lower is better)
Translates to: AEKRWPASQHMWASASAPGDRCL*QGSVCK
Trigger: CTTGCATACAGATCCCTGCAAGAGGCATCTGTCTCC...CGGGGCAGAGGCAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS GCA 90 bp TGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTaGAGCTCCTGCTTCAGTAGATACAGCTCCTCCTGCAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: CSCNSSSQEETMLAR*SSCFSRYSSSCRLR
Trigger: CCGCAGCCTGCAGGAGGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000572838.1
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 90 bp TGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTaGAGCTCCTGCTTCAGTAGATACAGCTGTGCGGTGGGGAGGCGA +
Preference number: 5 (lower is better)
Translates to: CSCNSSSQEETMLAR*SSCFSRYSCAVGRR
Trigger: TCGCCTCCCCACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS CCA 90 bp TGTAGACGTCAGGGTTGTGGAACTTCAGGCTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAGTCTTCAGCAAATCCAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: CRRQGCGTSGSPGRR*PRSSLESSANPASA
Trigger: GGCACTTGCTGGATTTGCTGAAGACTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGAGCCTGAAGTTCCACAACCCTGACGTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp GGTCCTGGCTTCCTGCTTGAGCTGCCAAAGACAGGCCAGACAGGCTaGTTAATTCGGGAAAGGTTCCGCTTTGAGGCCCGTGGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: GPGFLLELPKTGQTG*LIRERFRFEARGVS
Trigger: AGAAACTCCACGGGCCTCAAAGCGGAACCTTTCCCGAATTAACCAGCCTGTCTGGCCTGTCTTTGGCAGCTCAAGCAGGAAGCCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575666.1
CDS-3UTR CAA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVFSGLL*QELRAA
Trigger: TGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAA...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CGTAATCAACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: RNQPEPLWGLHTSSDACYRHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...GTAGCACGCATCACTAGAGGTGTGAAGGCCCCACAGAGGCTCTGGTTGATTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CAA 90 bp CCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGACCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: PGVVGDGAVRGSILHGVRPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...TCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571450.1
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: LRNRTALTGTQKPPQSREPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: FAIFSLTETWMTMGKMSIPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...GATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp CTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGCGCAGAGGGCTGGCCTaGGCTTTGTCCATACTGACG +
Preference number: 5 (lower is better)
Translates to: LLVDRDVDDDGEDVHPVQRRGLA*ALSILT
Trigger: CGTCAGTATGGACAAAGCCAAGGCCAGCCCTCTGCG...CTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp CTCCTCCTGGCTCAAGTACTCTGCCAGGCACTTCTTAAACCCTTGGAGGAGGCAGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: LLLAQVLCQALLKPLEEAAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...TGCCTCCTCCAAGGGTTTAAGAAGTGCCTGGCAGAGTACTTGAGCCAGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp CAGCCTCAGAAGCTGAGAAAAGGTGGCCAGCGTCACAGCATATGTGGGCTTCTGGCAGCCCCCATAGATTaGAATCGGGCCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: QPQKLRKGGQRHSICGLLAAPID*NRACRQ
Trigger: CTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGC...CAGAAGCCCACATATGCTGTGACGCTGGCCACCTTTTCTCAGCTTCTGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AGGGAAGGCATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGAGGCAGGCAGATCACTaGAGGTCAGAGTTCGAGACC +
Preference number: 5 (lower is better)
Translates to: REGMGRRPSCPTAETFSGRQADH*RSEFET
Trigger: GGTCTCGAACTCTGACCTCAAGTGATCTGCCTGCCT...CCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCATGCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573882.5
ENST00000648509.2
CDS CCA 90 bp TCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCTGGGAACGCG +
Preference number: 5 (lower is better)
Translates to: SGTALAIPAHRRKPC*LAAAPASVDTAGNA
Trigger: CGCGTTCCCAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS CCA 90 bp TCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCTGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: SGTALAIPAHRRKPC*LAAAPASVDTAVRW
Trigger: CCACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS-3UTR CAA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSARMAL*VSRGLC
Trigger: GCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGC...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGACCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: CGAFTPLVMRATHSAGQRPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...TCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGGTGTGAAGGCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS-3UTR CAA 90 bp GGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: GHGALLSHVLDEGYELLLLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...CAGCAGCAGCTCATAGCCCTCATCCAGGACATGACTCAGCAGTGCACCGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571450.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: RNRTALTGTQKPPQSREGLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: SVLTFTDRQQKPSTLLRSLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...GCTTCTCAGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651068.1
ENST00000651388.1
CDS-3UTR CAA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCCTGGGCTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: AWAEEQDCINRHTEAPTVALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...GACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAGCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTTCCATGAGGGACTCCACGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: VQLDVQEGMGVLFHEGLHALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...GTGGAGTCCCTCATGGAAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAAGGGTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: RNRTALTGTQKPPQSREGFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...CCCTTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ATAACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: ITVRVDLHRQAAEAVHPPRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...AGGAGGGTGGACGGCTTCTGCTGCCTGTCTGTGAAGGTCAACACGGACGGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575500.5
ENST00000651068.1
CDS-3UTR CAA 90 bp GGGCCACGGGGCACAGACCCACTGAAAGTACCGTCTCCACCACGCAGAGGCTTTCTTGATTCTTTTCATTaGGAAGGAGAGGCTGGACCA +
Preference number: 5 (lower is better)
Translates to: GPRGTDPLKVPSPPRRGFLDSFH*EGEAGP
Trigger: TGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAAG...AAAGCCTCTGCGTGGTGGAGACGGTACTTTCAGTGGGTCTGTGCCCCGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648509.2
ENST00000651672.1
CDS TCA 90 bp AAAGACAGGCCAGACAGGCTGGTTAATTCGGGAAAGGTTCCGCTTTaGGGCCCGTGGAGTTTCTACCAGGTCAGCACCACCCATTTCACC +
Preference number: 5 (lower is better)
Translates to: KDRPDRLVNSGKVPL*GPWSFYQVSTTHFT
Trigger: GGTGAAATGGGTGGTGCTGACCTGGTAGAAACTCCACGGGCCTCAAAGCGGAACCTTTCCCGAATTAACCAGCCTGTCTGGCCTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575666.1
CDS GCA 90 bp CCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTaGCAACCCTTCCCCAGTCGAGATCGGGGGTTCTTTGTGATAAGC +
Preference number: 5 (lower is better)
Translates to: PLVMRATHSAGQRVN*QPFPSRDRGFFVIS
Trigger: GCTTATCACAAAGAACCCCCGATCTCGACTGGGGAAGGGTTGGCAGTTGACTCTCTGGCCAGCACTATGTGTAGCACGCATCACTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS GCA 90 bp TCCCATGCTTTACAATTGGCCAAGTCCACTCCAGAACACAGTCGCTaGAGTAAACCCACCAAGTCGGGCATTGTGATGCACCTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: SHALQLAKSTPEHSR*SKPTKSGIVMHLQR
Trigger: CCGCTGGAGGTGCATCACAATGCCCGACTTGGTGGGTTTACTGCAGCGACTGTGTTCTGGAGTGGACTTGGCCAATTGTAAAGCATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 90 bp CTCACTTCCCAGGAAGGAGCTTATAAACAGAGACACAATCCGGGCTaGAAGATGGCCAGTGCCCTGGGCCCAGTGAATGCTTATGGAAGG +
Preference number: 5 (lower is better)
Translates to: LTSQEGAYKQRHNPG*KMASALGPVNAYGR
Trigger: CCTTCCATAAGCATTCACTGGGCCCAGGGCACTGGCCATCTTGCAGCCCGGATTGTGTCTCTGTTTATAAGCTCCTTCCTGGGAAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 90 bp CAGGAGAGAAGCCACGGAAAAGCCACCCATCATGCCTGGGAAAAGTaGAGATTCATGGCCAAGGAGAAGGAACACAGGAAGCTGGCAACC +
Preference number: 5 (lower is better)
Translates to: QERSHGKATHHAWEK*RFMAKEKEHRKLAT
Trigger: GGTTGCCAGCTTCCTGTGTTCCTTCTCCTTGGCCATGAATCTGCACTTTTCCCAGGCATGATGGGTGGCTTTTCCGTGGCTTCTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 90 bp ACTCTACACCGGGCAGGAGAGAAGCCACGGAAAAGCCACCCATCATaGCTGGGAAAAGTGCAGATTCATGGCCAAGGAGAAGGAACACAG +
Preference number: 5 (lower is better)
Translates to: TLHRAGEKPRKSHPS*LGKVQIHGQGEGTQ
Trigger: CTGTGTTCCTTCTCCTTGGCCATGAATCTGCACTTTTCCCAGGCATGATGGGTGGCTTTTCCGTGGCTTCTCTCCTGCCCGGTGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 90 bp AGGTGGAAAGGATTAAGGCACCCACCCATGACGGGCCCATGGACTTaGGAAGCAGAGAGGGCCGGTCCAATCACAAACAGAAATGAGCTA +
Preference number: 5 (lower is better)
Translates to: RWKGLRHPPMTGPWT*EAERAGPITNRNEL
Trigger: TAGCTCATTTCTGTTTGTGATTGGACCGGCCCTCTCTGCTTCCCAAGTCCATGGGCCCGTCATGGGTGGGTGCCTTAATCCTTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 90 bp TACACCGGGCAGGAGAGAAGCCACGGAAAAGCCACCCATCATGCCTaGGAAAAGTGCAGATTCATGGCCAAGGAGAAGGAACACAGGAAG +
Preference number: 5 (lower is better)
Translates to: YTGQERSHGKATHHA*EKCRFMAKEKEHRK
Trigger: CTTCCTGTGTTCCTTCTCCTTGGCCATGAATCTGCACTTTTCCCAGGCATGATGGGTGGCTTTTCCGTGGCTTCTCTCCTGCCCGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS-3UTR CAA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCG +
Preference number: 5 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGRHSVS*DVSMRP
Trigger: CGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCT...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CTGAGGAACAGGACTGCATTAACAGGCACACAGAAGCCCCCACAGTCCCGGGAACTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: LRNRTALTGTQKPPQSRELLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...TTCCCGGGACTGTGGGGGCTTCTGTGTGCCTGTTAATGCAGTCCTGTTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TFSGFPVQTMPSLVKGEDVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...ATCTTCACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGTTCCCCCAGAAGATGGCTaGCGGGTCACGGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: TMPSLVKGEDVSTEKCAVPPEDG*RVTVHC
Trigger: GCAGTGCACCGTGACCCGCAAGCCATCTTCTGGGGG...AACTGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCGGTTTTCCATTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: GKCSPHRFESGLQTGGFPFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...TGGAAAACCGCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS TCA 90 bp CAGATTCATGGCCAAGGAGAAGGAACACAGGAAGCTGGCAACCTCTaGGGACACCAGTTCCTCCCTTTACCAGGTCAGCCTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: QIHGQGEGTQEAGNL*GHQFLPLPGQPSPS
Trigger: TGAAGGAGAAGGCTGACCTGGTAAAGGGAGGAACTGGTGTCCTCAGAGGTTGCCAGCTTCCTGTGTTCCTTCTCCTTGGCCATGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 90 bp CCCACCTTGACCTCCCAAACATGGACCTGCATTTCTACCCAGACCTaGACTACTGTACTACACGGCATTTCCACACTGGCCTGCATTTCC +
Preference number: 5 (lower is better)
Translates to: PTLTSQTWTCISTQT*TTVLHGISTLACIS
Trigger: GGAAATGCAGGCCAGTGTGGAAATGCCGTGTAGTACAGTAGTGCAGGTCTGGGTAGAAATGCAGGTCCATGTTTGGGAGGTCAAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 90 bp TGCCATGACAGGCTGGCTGTGCCTCTGCTACCAACAGCAGCCAGCTaGTCTTGCTCACTTTGTTCTGAACTTAGACACCTTCCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CHDRLAVPLLPTAAS*SCSLCSELRHLPSA
Trigger: AGCAGAAGGAAGGTGTCTAAGTTCAGAACAAAGTGAGCAAGACCAGCTGGCTGCTGTTGGTAGCAGAGGCACAGCCAGCCTGTCATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571427.1
CDS-3UTR CAA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGTCCTCGGCCACCCGCTaGTACAGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWSSATR*YRDCWL
Trigger: CAGCCAGCAGTCCCTGTACAAGCGGGTGGCCGAGGA...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CCCGACACCCGGTTAGCACATTGTCAATTCGCAAGTTCCCAGCTCCTGCAATGGCACCCGGTTAGCACATaGTCAATTCGCAAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PDTRLAHCQFASSQLLQWHPVST*SIRKFP
Trigger: TGGGAACTTGCGAATTGACAATGTGCTAACCGGGTG...CCATTGCAGGAGCTGGGAACTTGCGAATTGACAATGTGCTAACCGGGTGTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS GCA 90 bp GACAGGCTGGCTGTGCCTCTGCTACCAACAGCAGCCAGCTGGTCTTaGTCACTTTGTTCTGAACTTAGACACCTTCCTTCTGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: DRLAVPLLPTAASWS*SLCSELRHLPSAVF
Trigger: AAAGACAGCAGAAGGAAGGTGTCTAAGTTCAGAACAAAGTGAGCAAGACCAGCTGGCTGCTGTTGGTAGCAGAGGCACAGCCAGCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571427.1
CDS-3UTR CAA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVFSGLL*QELRAA
Trigger: TGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAA...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: WEDVPPVPLQKHSQGFQFLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...GAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLVDRDVDDDGEDVHPVQALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...CTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCTGTCAACGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575500.5
ENST00000650867.1
ENST00000651068.1
CDS-3UTR CAA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LSHCRNILRVSSSDHAKPRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...AGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS TCA 90 bp AGGTTTCACCATGTTGGCCAAGATGGTCTCGATCTCTTGAGCTCATaGTCCGCCCACCTTGACCTCCCAAACATGGACCTGCATTTCTAC +
Preference number: 5 (lower is better)
Translates to: RFHHVGQDGLDLLSS*SAHLDLPNMDLHFY
Trigger: GTAGAAATGCAGGTCCATGTTTGGGAGGTCAAGGTGGGCGGATCATGAGCTCAAGAGATCGAGACCATCTTGGCCAACATGGTGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS GCA 90 bp TCCAGGCAGAAAGGTTTCTTTCCCCCATCCTTAACGCGAATCCCATaGTTTACAATTGGCCAAGTCCACTCCAGAACACAGTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SRQKGFFPPSLTRIP*FTIGQVHSRTQSLQ
Trigger: CTGCAGCGACTGTGTTCTGGAGTGGACTTGGCCAATTGTAAAGCATGGGATTCGCGTTAAGGATGGGGGAAAGAAACCTTTCTGCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS-3UTR CAA 90 bp ATGGGAAGACGTCCCTCCTGTCCCACTGCAGAAACATTCTCAGGGTTTCCAGTTCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: MGRRPSCPTAETFSGFPVLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...AACTGGAAACCCTGAGAATGTTTCTGCAGTGGGACAGGAGGGACGTCTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGGTCCTGGCTTCCTGCTaGAGCACACCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLVLASC*STPGGS
Trigger: AGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGAC...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp AATGTAAAAGGGAAGTGCAGCCCCCATAGATTTGAATCGGGCCTGCAGACAGGCTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: NVKGKCSPHRFESGLQTGFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...GCCTGTCTGCAGGCCCGATTCAAATCTATGGGGGCTGCACTTCCCTTTTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS TCA 90 bp CTGGGCACAGATGGGAGCGATTCCTTACAGACCCATGAATTCCTGTaGCTTGATTCTTTTCATTTGGAAGGAGAGGCTGGACCACTGGAG +
Preference number: 5 (lower is better)
Translates to: LGTDGSDSLQTHEFL*LDSFHLEGEAGPLE
Trigger: CTCCAGTGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAAGTCACAGGAATTCATGGGTCTGTAAGGAATCGCTCCCATCTGTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp AGGTTTCTTTCCCCCATCCTTAACGCGAATCCCATGCTTTACAATTaGCCAAGTCCACTCCAGAACACAGTCGCTGCAGTAAACCCACCA +
Preference number: 5 (lower is better)
Translates to: RFLSPILNANPMLYN*PSPLQNTVAAVNPP
Trigger: TGGTGGGTTTACTGCAGCGACTGTGTTCTGGAGTGGACTTGGCCAATTGTAAAGCATGGGATTCGCGTTAAGGATGGGGGAAAGAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS-3UTR CAA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFQEETM*ARCSSC
Trigger: GCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGACGTGCAGGACCTCGTaGCAATGCACCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLTCRTS*QCTCSS
Trigger: GGAGCTGCAGGTGCATTGCAACGAGGTCCTGCACGT...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS GCA 90 bp ACACAATCCGGGCTGCAAGATGGCCAGTGCCCTGGGCCCAGTGAATaGTTATGGAAGGAATATCTCAATAAATACCAATCTACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: TQSGLQDGQCPGPSE*LWKEYLNKYQSTER
Trigger: CCTCTCAGTAGATTGGTATTTATTGAGATATTCCTTCCATAAGCATTCACTGGGCCCAGGGCACTGGCCATCTTGCAGCCCGGATTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 90 bp TCCTGTGACTTGATTCTTTTCATTTGGAAGGAGAGGCTGGACCACTaGAGACAGATGCCTCTTGCAGGGATCTGTATGCAAGGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SCDLILFIWKERLDH*RQMPLAGICMQGSQ
Trigger: CTGAGAACCTTGCATACAGATCCCTGCAAGAGGCATCTGTCTCCAGTGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAAGTCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 90 bp TTGTCAATTCGCAAGTTCCCAGCTCCTGCAATGGTCCAGCTGGGCTaGGCATGTCACCGTCCACAGATTCAAAAAGTAAAATCAAGTCAG +
Preference number: 5 (lower is better)
Translates to: LSIRKFPAPAMVQLG*ACHRPQIQKVKSSQ
Trigger: CTGACTTGATTTTACTTTTTGAATCTGTGGACGGTGACATGCCCAGCCCAGCTGGACCATTGCAGGAGCTGGGAACTTGCGAATTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS-3UTR CAA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCACTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCALLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CAGACCATGCCAAGCCTGGTAAAGGGTGAAGATGTTTCCACAGAAAAGTGTGCAGCACTTCTTAAACCCTaGGAGGAGGCACAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QTMPSLVKGEDVSTEKCAALLKP*EEAQFL
Trigger: GAGAAACTGTGCCTCCTCCAAGGGTTTAAGAAGTGC...TGCACACTTTTCTGTGGAAACATCTTCACCCTTTACCAGGCTTGGCATGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCCTCAGGGACTGCTCTaGCAATTCCAGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFPQGLL*QFQLTG
Trigger: TCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAGG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CTCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LHHAEALFTSKHTGLCKLRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...CAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCAGAAACATTCTCAGGGTTTCCAGTTCAGACCATGCCAAGCCTGGTAAAGGGTCTTGATTCTTTTCATTaGGAAGGAGAGGCTGGACCA +
Preference number: 5 (lower is better)
Translates to: AETFSGFPVQTMPSLVKGLDSFH*EGEAGP
Trigger: TGGTCCAGCCTCTCCTTCCAAATGAAAAGAATCAAG...ACCCTTTACCAGGCTTGGCATGGTCTGAACTGGAAACCCTGAGAATGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
CDS-3UTR CAA 90 bp TCCACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGTTTGCCATCTTCTCGTaGACAGAGACGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: STTQRLYLQVNTLVSVNWFAIFS*TETWMT
Trigger: CGTCATCCACGTCTCTGTCAACGAGAAGATGGCAAA...CCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp ACCACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: TTQRLYLQVNTLVSVNWSRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...ACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp GCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTGCGCTGTAGGCCCTTCTaGAGCTTCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: AEALFTSKHTGLCKLEFLRCRPF*SFFAIF
Trigger: GAAGATGGCAAAGAAGCTCAAGAAGGGCCTACAGCG...CAGGAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS-3UTR CAA 90 bp CACGCAGAGGCTTTATTTACAAGTAAACACACTGGTCTCTGTAAACTGGAGTTCCTTCTCCCTGTAGAGTaGGCAGGCCATCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: HAEALFTSKHTGLCKLEFLLPVE*AGHLTL
Trigger: AAGAGTAAGATGGCCTGCCAACTCTACAGGGAGAAG...GAACTCCAGTTTACAGAGACCAGTGTGTTTACTTGTAAATAAAGCCTCTGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344227.6
ENST00000573882.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651672.1
CDS TCA 90 bp CCTGGCTCACAGGCAAAAACCCATTGGGATCACATTCAAAGCCAATaGAATGAGCTGTGTACTCTGGATGTATTTGAGGTCAATTCCACT +
Preference number: 5 (lower is better)
Translates to: PGSQAKTHWDHIQSQ*NELCTLDVFEVNST
Trigger: AGTGGAATTGACCTCAAATACATCCAGAGTACACAGCTCATTTCATTGGCTTTGAATGTGATCCCAATGGGTTTTTGCCTGTGAGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS GCA 72 bp TGCAGGCCCTCGGCACGGGTCTCGGCCAGGCCCAGGTaGTCCTGCAGCTGCTGGCACCGCCGCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: CRPSARVSARPR*SCSCWHRRSST
Trigger: GGTGCTGCTGCGGCGGTGCCAGCAGCTGCAGGAGCACCTGGGCCTGGCCGAGACCCGTGCCGAGGGCCTGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp GGAGGGGCCTCGCACGGCTCACCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGC +
Preference number: 6 (lower is better)
Translates to: GGASHGSPSQSG*PGARPSGPPPS
Trigger: GCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGGTGAGCCGTGCGAGGCCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 72 bp TCACGCTTCATGCGGCTGTGGTCAGCCTCCAGCTGGTaGAGGCCCTCGGCACGGGTCTCGGCCAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SRFMRLWSASSW*RPSARVSARPR
Trigger: CCTGGGCCTGGCCGAGACCCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCGTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp GTCATCACAATCTGGGTGCCCGGGCGCAAGGCCATCTaGTCCGCCGCCGAGCCCGGGGTGACCCGGTGGATG +
Preference number: 6 (lower is better)
Translates to: VITIWVPGRKAI*SAAEPGVTRWM
Trigger: CATCCACCGGGTCACCCCGGGCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS CCA 72 bp CGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTGCCGTGTCT +
Preference number: 6 (lower is better)
Translates to: RQHGDLAQDPAG*PPPHEDAAAVS
Trigger: AGACACGGCAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649277.1
CDS CCA 72 bp CGCCAGCATGGTGACCTGGCTCAGGATCCTGCGGGCTaGCCTCCGCCGCATGAGGACGCCGCTGCTGCTTAC +
Preference number: 6 (lower is better)
Translates to: RQHGDLAQDPAG*PPPHEDAAAAY
Trigger: GTAAGCAGCAGCGGCGTCCTCATGCGGCGGAGGCCAGCCCGCAGGATCCTGAGCCAGGTCACCATGCTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS TCA 72 bp AATCCAGCAAGTGCCCGGCCCGCATGGCGCTGTTGGTaGGCCGGGGGCTGTGCAGCACCTCCTCCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: NPASARPAWRCW*AGGCAAPPPRP
Trigger: TGGACGAGGAGGAGGTGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGCCGGGCACTTGCTGGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp TGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTaGTCACCTGGAGTAGTTGGGGATGGTGCCGTGCGC +
Preference number: 6 (lower is better)
Translates to: WASLGTHRARGS*SPGVVGDGAVR
Trigger: GCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGCGTCCCCAGAGAGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS GCA 72 bp AGCTCCTGTCGGCTCCCCCGCGCCTCGTCCAGGCTCTaGTCCAGAATGTCCTTCTCCGCCTGGGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SSCRLPRASSRL*SRMSFSAWGRE
Trigger: CTCTCTGCCCCAGGCGGAGAAGGACATTCTGGAGCAGAGCCTGGACGAGGCGCGGGGGAGCCGACAGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CAA 72 bp AGCAAATCCAGCAAGTGCCCGGCCCGCATGGCGCTGTaGGTGAGCCGGGGGCTGTGCAGCACCTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SKSSKCPARMAL*VSRGLCSTSSS
Trigger: CGAGGAGGAGGTGCTGCACAGCCCCCGGCTCACCAACAGCGCCATGCGGGCCGGGCACTTGCTGGATTTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp CTGGCTTCCTGCTTGAGCACACCCGGAGGCTCTGCCTaGAGCTGGCGAAGCTGTGTGCGCAGCTCGCAGACC +
Preference number: 6 (lower is better)
Translates to: LASCLSTPGGSA*SWRSCVRSSQT
Trigger: GGTCTGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp GGTCCTGGCTTCCTGCTTGAGCACACCCGGAGGCTCTaGCTGCAGCTGGCGAAGCTGTGTGCGCAGCTCGCA +
Preference number: 6 (lower is better)
Translates to: GPGFLLEHTRRL*LQLAKLCAQLA
Trigger: TGCGAGCTGCGCACACAGCTTCGCCAGCTGCAGGCAGAGCCTCCGGGTGTGCTCAAGCAGGAAGCCAGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp TCTCTGGGGCAGATGGCATGCATCCGCACCAGCCGCTaGTTCTCCCGTGGACAGGGCTCCCTGGTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SLGQMACIRTSR*FSRGQGSLVLA
Trigger: AGCCAGGACCAGGGAGCCCTGTCCACGGGAGAAGCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp TGCAAGGCCCAAGGCTGGGAGCCGGTCGCGCCGAGGTaGAAAGGATTAAGGCACCCACCCATGACGGGCCCA +
Preference number: 6 (lower is better)
Translates to: CKAQGWEPVAPR*KGLRHPPMTGP
Trigger: TGGGCCCGTCATGGGTGGGTGCCTTAATCCTTTCCACCTCGGCGCGACCGGCTCCCAGCCTTGGGCCTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS TCA 72 bp GCTACAGGAGAAGCGCGAGGCCTCAGGGCCAGCGCCTaGGAGGAGAGATGCTCCCCGCAGGTAGATGTCACG +
Preference number: 6 (lower is better)
Translates to: ATGEARGLRASA*EERCSPQVDVT
Trigger: CGTGACATCTACCTGCGGGGAGCATCTCTCCTCTCAGGCGCTGGCCCTGAGGCCTCGCGCTTCTCCTGTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS TCA 72 bp AGGAAGAGCCTGTGTCGGCTGAGCCCCTCCGTAGGCTaGGCCCTCCGTAGGCTGACCTGCTCTTCGCCGGAT +
Preference number: 6 (lower is better)
Translates to: RKSLCRLSPSVG*ALRRLTCSSPD
Trigger: ATCCGGCGAAGAGCAGGTCAGCCTACGGAGGGCTCAGCCTACGGAGGGGCTCAGCCGACACAGGCTCTTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650806.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp AGGCTGCAGTCGCTGTCGTCTCTGGGGCAGATGGCATaGATCCGCACCAGCCGCTGCTTCTCCCGTGGACAG +
Preference number: 6 (lower is better)
Translates to: RLQSLSSLGQMA*IRTSRCFSRGQ
Trigger: CTGTCCACGGGAGAAGCAGCGGCTGGTGCGGATGCATGCCATCTGCCCCAGAGACGACAGCGACTGCAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp TGGAAGTGTGCGCTAACCTCACGCTTCATGCGGCTGTaGTCAGCCTCCAGCTGGTGCAGGCCCTCGGCACGG +
Preference number: 6 (lower is better)
Translates to: WKCALTSRFMRL*SASSWCRPSAR
Trigger: CCGTGCCGAGGGCCTGCACCAGCTGGAGGCTGACCACAGCCGCATGAAGCGTGAGGTTAGCGCACACTTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp GGCTGCTGGAGCGGAAGCTGTCCACCAGCTCGCGGCTaGACGTGGCACTCAGGTCCGACAAGAGCTGAGACT +
Preference number: 6 (lower is better)
Translates to: GCWSGSCPPARG*TWHSGPTRAET
Trigger: AGTCTCAGCTCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGGACAGCTTCCGCTCCAGCAGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp TCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTaGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTAT +
Preference number: 6 (lower is better)
Translates to: SGDAPSSRQLLT*SSWGWCRARQY
Trigger: ATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGCGTCCCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS GCA 72 bp GGCTTACGCTGGCTGGCAGGCGGGACTTTCCCAAAGTaGAAGGTCGAGGCCAAGGTCAAGGCCCAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: GLRWLAGGTFPK*KVEAKVKAQGR
Trigger: TCTGCCCTGGGCCTTGACCTTGGCCTCGACCTTGCACTTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 72 bp TGTGGCCGCAATCACTGGCACTGGCCAGCAGCTGCCTaGTCCTTACCCCAGACTCCTCTGCTTCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: CGRNHWHWPAAA*SLPQTPLLPSW
Trigger: CCAGCTGGGAAGCAGAGGAGTCTGGGGTAAGGAGCAGGCAGCTGCTGGCCAGTGCCAGTGATTGCGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 72 bp TGGAGCGGAAGCTGTCCACCAGCTCGCGGCTGGACGTaGCACTCAGGTCCGACAAGAGCTGAGACTCTGTGG +
Preference number: 6 (lower is better)
Translates to: WSGSCPPARGWT*HSGPTRAETLW
Trigger: CCACAGAGTCTCAGCTCTTGTCGGACCTGAGTGCCACGTCCAGCCGCGAGCTGGTGGACAGCTTCCGCTCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000573754.5
ENST00000573882.5
ENST00000574148.5
ENST00000575500.5
ENST00000575666.1
ENST00000648509.2
ENST00000649277.1
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp CTGCATTCCAGCCTAGGAGCCAGAGTGAAACTCCCATaGGGGGCAGAGGGTCACAAGCCCAGGAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LHSSLGARVKLP*GAEGHKPRRRG
Trigger: CCCCCTCCTCCTGGGCTTGTGACCCTCTGCCCCCCATGGGAGTTTCACTCTGGCTCCTAGGCTGGAATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571427.1
CDS CCA 72 bp GCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTaGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGG +
Preference number: 6 (lower is better)
Translates to: APSSRQLLTWSS*GWCRARQYPSW
Trigger: CCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCTCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS CCA 72 bp CAGACAGAGCGCAGCCGGCCTTTGGCTTACGCTGGCTaGCAGGCGGGACTTTCCCAAAGTGCAAGGTCGAGG +
Preference number: 6 (lower is better)
Translates to: QTERSRPLAYAG*QAGLSQSARSR
Trigger: CCTCGACCTTGCACTTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 72 bp CCAGCAGACAGAGCGCAGCCGGCCTTTGGCTTACGCTaGCTGGCAGGCGGGACTTTCCCAAAGTGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: PADRAQPAFGLR*LAGGTFPKCKV
Trigger: GACCTTGCACTTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CAA 72 bp GGGCGCTGGGAGGACCCAAGGTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCAGGGTGGGGTCCACAG +
Preference number: 6 (lower is better)
Translates to: GRWEDPRFSGLL*QELRAAGWGPQ
Trigger: CTGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTGGGTCCTCCCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000650806.1
ENST00000651068.1
ENST00000651388.1
CDS TCA 72 bp CTGGTCAGAAGCGCCGCATGGCAGCAGCACCACGGGTaGCATGCTGGGTTCTGCACGGCACGACTCTCATCT +
Preference number: 6 (lower is better)
Translates to: LVRSAAWQQHHG*HAGFCTARLSS
Trigger: AGATGAGAGTCGTGCCGTGCAGAACCCAGCATGTCACCCGTGGTGCTGCTGCCATGCGGCGCTTCTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 72 bp GGCGCTGGGAGGACCCAAGGTTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAGGGTGGGGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: GAGRTQGSQVCF*RSSVQQGGVHS
Trigger: ACTGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTGGGTCCTCCCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000650806.1
ENST00000651068.1
ENST00000651388.1
CDS GCA 72 bp TTCTCCCGTGGACAGGGCTCCCTGGTCCTGGCTTCCTaGTTGAGCTGCCAAAGACAGGCCAGACAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: FSRGQGSLVLAS*LSCQRQARQAG
Trigger: ACCAGCCTGTCTGGCCTGTCTTTGGCAGCTCAAGCAGGAAGCCAGGACCAGGGAGCCCTGTCCACGGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000649277.1
CDS GCA 72 bp TGTGCCTCGCCTCAGCCTGGCACCACTAAGCCACCCTaGCTGCTGCCTTCTGAAACCACTGGGAAGCCCAAG +
Preference number: 6 (lower is better)
Translates to: CASPQPGTTKPP*LLPSETTGKPK
Trigger: CTTGGGCTTCCCAGTGGTTTCAGAAGGCAGCAGGCAGGGTGGCTTAGTGGTGCCAGGCTGAGGCGAGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 72 bp CCTTTTCCTGGTTCAGCTCCTCCTGCAGGCTGCCGATaGCCCCAGCCAGGCACTCGGTCAGCTTGGATGTCT +
Preference number: 6 (lower is better)
Translates to: PFPGSAPPAGCR*PQPGTRSAWMS
Trigger: AGACATCCAAGCTGACCGAGTGCCTGGCTGGGGCCATCGGCAGCCTGCAGGAGGAGCTGAACCAGGAAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp CACAAGGACACCAGCAGACAGAGCGCAGCCGGCCTTTaGCTTACGCTGGCTGGCAGGCGGGACTTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: HKDTSRQSAAGL*LTLAGRRDFPK
Trigger: TTTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTGCTGGTGTCCTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 72 bp CCCGAGAAGATGGCGGCAACTGCACGGTCAGGTGTGTaGACGGATGCAGTCTTGCCACTCTACACCGGGCAG +
Preference number: 6 (lower is better)
Translates to: PEKMAATARSGV*TDAVLPLYTGQ
Trigger: CTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCTTCTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CAA 72 bp ACACAAGGACACCAGCAGACAGAGCGCAGCCGGCCTTaGGCTTACGCTGGCTGGCAGGCGGGACTTTCCCAA +
Preference number: 6 (lower is better)
Translates to: TQGHQQTERSRP*AYAGWQAGLSQ
Trigger: TTGGGAAAGTCCCGCCTGCCAGCCAGCGTAAGCCAAAGGCCGGCTGCGCTCTGTCTGCTGGTGTCCTTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS TCA 72 bp GCCGCTCTCTGCTGCGGGGACCGGAACCTACCAGGCTaGAAGTCAGCGAGCGCAGTTTCTCATTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: AALCCGDRNLPG*KSASAVSHSPP
Trigger: AGGAGGAGAATGAGAAACTGCGCTCGCTGACTTTCAGCCTGGTAGGTTCCGGTCCCCGCAGCAGAGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572838.1
ENST00000652599.1
CDS TCA 72 bp CCCGTGGACAGGGCTCCCTGGTCCTGGCTTCCTGCTTaGGCTGCCAAAGACAGGCCAGACAGGCTGGTTAAT +
Preference number: 6 (lower is better)
Translates to: PVDRAPWSWLPA*AAKDRPDRLVN
Trigger: ATTAACCAGCCTGTCTGGCCTGTCTTTGGCAGCTCAAGCAGGAAGCCAGGACCAGGGAGCCCTGTCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000649277.1
CDS GCA 72 bp AGGCCAAGGTCAAGGCCCAGGGCAGAAGTTGAGCTCTaGTTCTATCTGCCCTTTCCCTGGAGAGAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: RPRSRPRAEVEL*FYLPFPWREAP
Trigger: CGGGGCCTCTCTCCAGGGAAAGGGCAGATAGAAGCAGAGCTCAACTTCTGCCCTGGGCCTTGACCTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 72 bp CGCCTCAGCCTGGCACCACTAAGCCACCCTGCCTGCTaGCTTCTGAAACCACTGGGAAGCCCAAGCGTTACA +
Preference number: 6 (lower is better)
Translates to: RLSLAPLSHPAC*LLKPLGSPSVT
Trigger: TGTAACGCTTGGGCTTCCCAGTGGTTTCAGAAGGCAGCAGGCAGGGTGGCTTAGTGGTGCCAGGCTGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571861.5
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS GCA 72 bp CTGTGGAGGAGAGGATCCAGGCCTCACCCTCCATCCTaGTGGGGTCCAACTGGCCCCTGTCAAAGGACAAAC +
Preference number: 6 (lower is better)
Translates to: LWRRGSRPHPPS*WGPTGPCQRTN
Trigger: GTTTGTCCTTTGACAGGGGCCAGTTGGACCCCAGCAGGATGGAGGGTGAGGCCTGGATCCTCTCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651672.1
CDS GCA 72 bp GATGGCGGCAACTGCACGGTCAGGTGTGTGGACGGATaGAGTCTTGCCACTCTACACCGGGCAGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: DGGNCTVRCVDG*SLATLHRAGEK
Trigger: CTTCTCTCCTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 72 bp CTGGCCTGCATTTCCACACAGGCCTGCATTTCTGTGTaGCCGCAATCACTGGCACTGGCCAGCAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LACISTQACISV*PQSLALASSCL
Trigger: CAGGCAGCTGCTGGCCAGTGCCAGTGATTGCGGCCACACAGAAATGCAGGCCTGTGTGGAAATGCAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CAA 72 bp GCAACTGCACGGTCAGGTGTGTGGACGGATGCAGTCTaGCCACTCTACACCGGGCAGGAGAGAAGCCACGGA +
Preference number: 6 (lower is better)
Translates to: ATARSGVWTDAV*PLYTGQERSHG
Trigger: TCCGTGGCTTCTCTCCTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CAA 90 bp CATGGCTGGGCGCTGGGAGGACCGCTCCTGTGGGAGGATATCAGGTaGTGCCTAATTTTTCTCCACTGCTCACAGAGCTGCAGCCACCGC +
Preference number: 6 (lower is better)
Translates to: HGWALGGPLLWEDIR*CLIFLHCSQSCSHR
Trigger: GCGGTGGCTGCAGCTCTGTGAGCAGTGGAGAAAAATTAGGCACAACCTGATATCCTCCCACAGGAGCGGTCCTCCCAGCGCCCAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CAA 90 bp CCCCAGACTCCTCTGCTTCCCAGCTGGTGGTGGCAGGTCTCTGAGTaGTCAATCCTAGGACTAGAGGCTCCCCAGGGTCTCCCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: PQTPLLPSWWWQVSE*SILGLEAPQGLPSS
Trigger: AGAGCTTGGGAGACCCTGGGGAGCCTCTAGTCCTAGGATTGACAACTCAGAGACCTGCCACCACCAGCTGGGAAGCAGAGGAGTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CAA 90 bp AAGATGGCGGCAACTGCACGGTCAGGTGTGTGGACGGATGCAGTCTaGCCACTCTACACCGGGCAGGAGAGAAGCCACGGAAAAGCCACC +
Preference number: 6 (lower is better)
Translates to: KMAATARSGVWTDAV*PLYTGQERSHGKAT
Trigger: GGTGGCTTTTCCGTGGCTTCTCTCCTGCCCGGTGTAGAGTGGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS TCA 72 bp GGAAGCAGAGAGGGCCGGTCCAATCACAAACAGAAATaGGCTACAGGAGAAGCGCGAGGCCTCAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GSREGRSNHKQK*ATGEARGLRAS
Trigger: GCTGGCCCTGAGGCCTCGCGCTTCTCCTGTAGCTCATTTCTGTTTGTGATTGGACCGGCCCTCTCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS TCA 72 bp GACTCCTCTGCTTCCCAGCTGGTGGTGGCAGGTCTCTaGGTTGTCAATCCTAGGACTAGAGGCTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: DSSASQLVVAGL*VVNPRTRGSPG
Trigger: CCCTGGGGAGCCTCTAGTCCTAGGATTGACAACTCAGAGACCTGCCACCACCAGCTGGGAAGCAGAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS GCA 72 bp TCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTGGGAACGCGGGACCGGG +
Preference number: 6 (lower is better)
Translates to: SQEETMLARCSS*FSRYSWERGTG
Trigger: CCCGGTCCCGCGTTCCCAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 72 bp TTTGTGATAAGCACTTTCCTGTCATCACAATCTGGGTaGCCGGGCGCAAGGCCATCTGGTCCGCCGCCGAGC +
Preference number: 6 (lower is better)
Translates to: FVISTFLSSQSG*PGARPSGPPPS
Trigger: GCTCGGCGGCGGACCAGATGGCCTTGCGCCCGGGCACCCAGATTGTGATGACAGGAAAGTGCTTATCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS GCA 72 bp CCTAGGCAAGCAGAATCCCGAGAAGATGGCGGCAACTaGACGGTCAGGTGTGTGGACGGATGCAGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: PRQAESREDGGN*TVRCVDGCSLA
Trigger: GGCAAGACTGCATCCGTCCACACACCTGACCGTGCAGTTGCCGCCATCTTCTCGGGATTCTGCTTGCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 72 bp AGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGATaGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: SSRQLLTWSSWG*CRARQYPSWCK
Trigger: CTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS CCA 72 bp TTACCTCTCCGAGACATCAAGCCTTCCAGGGGAGACTaGCTGCAGGCTGCTTTCCAGCTGCGGAAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: LPLRDIKPSRGD*LQAAFQLRKVC
Trigger: GCAGACCTTCCGCAGCTGGAAAGCAGCCTGCAGCCAGTCTCCCCTGGAAGGCTTGATGTCTCGGAGAGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651068.1
CDS GCA 72 bp CATCTCGTCCTTCAGCCTCAGCACCTCATGGAAGTGTaGGCTAACCTCACGCTTCATGCGGCTGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: HLVLQPQHLMEV*ANLTLHAAVVS
Trigger: GCTGACCACAGCCGCATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCTGAAGGACGAGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp CAGAAGCGCCGCATGGCAGCAGCACCACGGGTGACATaGTGGGTTCTGCACGGCACGACTCTCATCTATAAA +
Preference number: 6 (lower is better)
Translates to: QKRRMAAAPRVT*WVLHGTTLIYK
Trigger: TTTATAGATGAGAGTCGTGCCGTGCAGAACCCAGCATGTCACCCGTGGTGCTGCTGCCATGCGGCGCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS GCA 72 bp TCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGATGGTaGCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGT +
Preference number: 6 (lower is better)
Translates to: SRQLLTWSSWGW*RARQYPSWCKS
Trigger: ACTCTTACACCATGAAGGATACTGCCGCGCACGGCACCATCCCCAACTACTCCAGGTGAGCAGCTGCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570421.5
CDS GCA 72 bp TCACAGGAGGAAACCATGTTGGCTCGCTGCAGCTCCTaGTTCAGTAGATACAGCTGTGCGGTGGGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: SQEETMLARCSS*FSRYSCAVGRR
Trigger: TCGCCTCCCCACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS CCA 72 bp AGGCTGAGCATCTCGTCCTTCAGCCTCAGCACCTCATaGAAGTGTGCGCTAACCTCACGCTTCATGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RLSISSFSLSTS*KCALTSRFMRL
Trigger: CAGCCGCATGAAGCGTGAGGTTAGCGCACACTTCCATGAGGTGCTGAGGCTGAAGGACGAGATGCTCAGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648128.1
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp GGATTAAGGCACCCACCCATGACGGGCCCATGGACTTaGGAAGCAGAGAGGGCCGGTCCAATCACAAACAGA +
Preference number: 6 (lower is better)
Translates to: GLRHPPMTGPWT*EAERAGPITNR
Trigger: TCTGTTTGTGATTGGACCGGCCCTCTCTGCTTCCCAAGTCCATGGGCCCGTCATGGGTGGGTGCCTTAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 72 bp TGGAAAGGATTAAGGCACCCACCCATGACGGGCCCATaGACTTGGGAAGCAGAGAGGGCCGGTCCAATCACA +
Preference number: 6 (lower is better)
Translates to: WKGLRHPPMTGP*TWEAERAGPIT
Trigger: TGTGATTGGACCGGCCCTCTCTGCTTCCCAAGTCCATGGGCCCGTCATGGGTGGGTGCCTTAATCCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575666.1
ENST00000650806.1
ENST00000652599.1
CDS CCA 72 bp GCCTGCTCCTTACCCCAGACTCCTCTGCTTCCCAGCTaGTGGTGGCAGGTCTCTGAGTTGTCAATCCTAGGA +
Preference number: 6 (lower is better)
Translates to: ACSLPQTPLLPS*WWQVSELSILG
Trigger: TCCTAGGATTGACAACTCAGAGACCTGCCACCACCAGCTGGGAAGCAGAGGAGTCTGGGGTAAGGAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CAA 72 bp AGGCTGCCGATGGCCCCAGCCAGGCACTCGGTCAGCTaGGATGTCTCCATGAGACCGCTAAAGTTACTGAAG +
Preference number: 6 (lower is better)
Translates to: RLPMAPARHSVS*DVSMRPLKLLK
Trigger: CTTCAGTAACTTTAGCGGTCTCATGGAGACATCCAAGCTGACCGAGTGCCTGGCTGGGGCCATCGGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS TCA 72 bp CCAGACAGGCTGGTTAATTCGGGAAAGGTTCCGCTTTaGGGCCCGTGGAGTTTCTACCAGGTCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: PDRLVNSGKVPL*GPWSFYQVSTT
Trigger: GGTGGTGCTGACCTGGTAGAAACTCCACGGGCCTCAAAGCGGAACCTTTCCCGAATTAACCAGCCTGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575666.1
CDS TCA 72 bp GGCCAAGGAGAAGGAACACAGGAAGCTGGCAACCTCTaGGGACACCAGTTCCTCCCTTTACCAGGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GQGEGTQEAGNL*GHQFLPLPGQP
Trigger: AGGCTGACCTGGTAAAGGGAGGAACTGGTGTCCTCAGAGGTTGCCAGCTTCCTGTGTTCCTTCTCCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 72 bp GCAGGGATCTGTATGCAAGGTTCTCAGGTTTGCTTTTaGAGGAGCTCCGTGCAGCAGGGTGGGGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: AGICMQGSQVCF*RSSVQQGGVHS
Trigger: ACTGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTGCATACAGATCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000573489.5
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp CCTCTTGCAGGGATCTGTATGCAAGGTTCTCAGGTTTaGTTTTGCAGGAGCTCCGTGCAGCAGGGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: PLAGICMQGSQV*FCRSSVQQGGV
Trigger: GACCCCACCCTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTGCATACAGATCCCTGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000573489.5
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp CAGGGTTGTGGAACTTCAGGCTCTCCAGGAAGGCGATaGCCCCGTTCTTCCCTCGAGTCTTCAGCAAATCCA +
Preference number: 6 (lower is better)
Translates to: QGCGTSGSPGRR*PRSSLESSANP
Trigger: TGGATTTGCTGAAGACTCGAGGGAAGAACGGGGCCATCGCCTTCCTGGAGAGCCTGAAGTTCCACAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650806.1
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CAA 72 bp TGCAGGGATCTGTATGCAAGGTTCTCAGGTTTGCTTTaGCAGGAGCTCCGTGCAGCAGGGTGGGGTCCACAG +
Preference number: 6 (lower is better)
Translates to: CRDLYARFSGLL*QELRAAGWGPQ
Trigger: CTGTGGACCCCACCCTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTGCATACAGATCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000573489.5
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CAA 72 bp GCCTCTTGCAGGGATCTGTATGCAAGGTTCTCAGGTTaGCTTTTGCAGGAGCTCCGTGCAGCAGGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: ASCRDLYARFSG*LLQELRAAGWG
Trigger: ACCCCACCCTGCTGCACGGAGCTCCTGCAAAAGCAAACCTGAGAACCTTGCATACAGATCCCTGCAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000573489.5
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CAA 90 bp CTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LRDCSCNSSSQEETM*ARCSSCFSRYSSSC
Trigger: GCAGGAGGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000572838.1
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CAA 90 bp CTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCTGGGAACGC +
Preference number: 6 (lower is better)
Translates to: LRDCSCNSSSQEETM*ARCSSCFSRYSWER
Trigger: GCGTTCCCAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573754.5
CDS CAA 90 bp CTCAGGGACTGCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTaGGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCTGTGCGGTG +
Preference number: 6 (lower is better)
Translates to: LRDCSCNSSSQEETM*ARCSSCFSRYSCAV
Trigger: CACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGCAGTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS GCA 72 bp ATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTaGCAACCCTTCCCCAGTCGAGATCGGGGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: MRATHSAGQRVN*QPFPSRDRGFF
Trigger: AAAGAACCCCCGATCTCGACTGGGGAAGGGTTGGCAGTTGACTCTCTGGCCAGCACTATGTGTAGCACGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651388.1
CDS GCA 72 bp CAGATTCAAAAAGTAAAATCAAGTCAGAGCTCCTCCTaGAGGCTGCGGCAGCGTGAGGCGGCCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: QIQKVKSSQSSS*RLRQREAASSF
Trigger: GAAGGAGCTGGCCGCCTCACGCTGCCGCAGCCTGCAGGAGGAGCTCTGACTTGATTTTACTTTTTGAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648128.1
CDS GCA 72 bp CAGGAAGGAGCTTATAAACAGAGACACAATCCGGGCTaGAAGATGGCCAGTGCCCTGGGCCCAGTGAATGCT +
Preference number: 6 (lower is better)
Translates to: QEGAYKQRHNPG*KMASALGPVNA
Trigger: AGCATTCACTGGGCCCAGGGCACTGGCCATCTTGCAGCCCGGATTGTGTCTCTGTTTATAAGCTCCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 72 bp TTCCTGCTTGAGCTGCCAAAGACAGGCCAGACAGGCTaGTTAATTCGGGAAAGGTTCCGCTTTGAGGCCCGT +
Preference number: 6 (lower is better)
Translates to: FLLELPKTGQTG*LIRERFRFEAR
Trigger: ACGGGCCTCAAAGCGGAACCTTTCCCGAATTAACCAGCCTGTCTGGCCTGTCTTTGGCAGCTCAAGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000649277.1
CDS TCA 72 bp CATGTTGGCCAAGATGGTCTCGATCTCTTGAGCTCATaGTCCGCCCACCTTGACCTCCCAAACATGGACCTG +
Preference number: 6 (lower is better)
Translates to: HVGQDGLDLLSS*SAHLDLPNMDL
Trigger: CAGGTCCATGTTTGGGAGGTCAAGGTGGGCGGATCATGAGCTCAAGAGATCGAGACCATCTTGGCCAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS GCA 72 bp AATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTaGAGCTCCTGCTTCAGTAGATACAGCTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: NSSSQEETMLAR*SSCFSRYSSSC
Trigger: GCAGGAGGAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000572838.1
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS GCA 72 bp AATTCCAGCTCACAGGAGGAAACCATGTTGGCTCGCTaGAGCTCCTGCTTCAGTAGATACAGCTGTGCGGTG +
Preference number: 6 (lower is better)
Translates to: NSSSQEETMLAR*SSCFSRYSCAV
Trigger: CACCGCACAGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571861.5
CDS CAA 72 bp TTTTCTCCACTGCTCACAGAGCTGCAGCCACCGCCTTaGTTAATCTCCTGGGCACAGATGGGAGCGATTCCT +
Preference number: 6 (lower is better)
Translates to: FSPLLTELQPPP*LISWAQMGAIP
Trigger: AGGAATCGCTCCCATCTGTGCCCAGGAGATTAACAAAGGCGGTGGCTGCAGCTCTGTGAGCAGTGGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000575465.6
ENST00000648509.2
ENST00000650867.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp GCTCTTGCAATTCCAGCTCACAGGAGGAAACCATGTTaGCTCGCTGCAGCTCCTGCTTCAGTAGATACAGCT +
Preference number: 6 (lower is better)
Translates to: ALAIPAHRRKPC*LAAAPASVDTA
Trigger: AGCTGTATCTACTGAAGCAGGAGCTGCAGCGAGCCAACATGGTTTCCTCCTGTGAGCTGGAATTGCAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000344227.6
ENST00000570421.5
ENST00000571450.1
ENST00000571861.5
ENST00000572838.1
ENST00000573754.5
ENST00000573882.5
ENST00000575500.5
ENST00000648509.2
ENST00000650867.1
ENST00000651068.1
ENST00000651388.1
ENST00000651672.1
ENST00000652599.1
CDS CCA 72 bp AGGCTGGCTGTGCCTCTGCTACCAACAGCAGCCAGCTaGTCTTGCTCACTTTGTTCTGAACTTAGACACCTT +
Preference number: 6 (lower is better)
Translates to: RLAVPLLPTAAS*SCSLCSELRHL
Trigger: AAGGTGTCTAAGTTCAGAACAAAGTGAGCAAGACCAGCTGGCTGCTGTTGGTAGCAGAGGCACAGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571427.1
CDS CCA 72 bp CAGGAGAGAAGCCACGGAAAAGCCACCCATCATGCCTaGGAAAAGTGCAGATTCATGGCCAAGGAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: QERSHGKATHHA*EKCRFMAKEKE
Trigger: TTCCTTCTCCTTGGCCATGAATCTGCACTTTTCCCAGGCATGATGGGTGGCTTTTCCGTGGCTTCTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 72 bp GCTGTGCCTCTGCTACCAACAGCAGCCAGCTGGTCTTaGTCACTTTGTTCTGAACTTAGACACCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: AVPLLPTAASWS*SLCSELRHLPS
Trigger: AGAAGGAAGGTGTCTAAGTTCAGAACAAAGTGAGCAAGACCAGCTGGCTGCTGTTGGTAGCAGAGGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571427.1
CDS GCA 72 bp TTACAATTGGCCAAGTCCACTCCAGAACACAGTCGCTaGAGTAAACCCACCAAGTCGGGCATTGTGATGCAC +
Preference number: 6 (lower is better)
Translates to: LQLAKSTPEHSR*SKPTKSGIVMH
Trigger: GTGCATCACAATGCCCGACTTGGTGGGTTTACTGCAGCGACTGTGTTCTGGAGTGGACTTGGCCAATTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS CCA 72 bp TCCCCCATCCTTAACGCGAATCCCATGCTTTACAATTaGCCAAGTCCACTCCAGAACACAGTCGCTGCAGTA +
Preference number: 6 (lower is better)
Translates to: SPILNANPMLYN*PSPLQNTVAAV
Trigger: TACTGCAGCGACTGTGTTCTGGAGTGGACTTGGCCAATTGTAAAGCATGGGATTCGCGTTAAGGATGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 72 bp GGGCTGCAAGATGGCCAGTGCCCTGGGCCCAGTGAATaGTTATGGAAGGAATATCTCAATAAATACCAATCT +
Preference number: 6 (lower is better)
Translates to: GLQDGQCPGPSE*LWKEYLNKYQS
Trigger: AGATTGGTATTTATTGAGATATTCCTTCCATAAGCATTCACTGGGCCCAGGGCACTGGCCATCTTGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS GCA 72 bp AAAGGTTTCTTTCCCCCATCCTTAACGCGAATCCCATaGTTTACAATTGGCCAAGTCCACTCCAGAACACAG +
Preference number: 6 (lower is better)
Translates to: KGFFPPSLTRIP*FTIGQVHSRTQ
Trigger: CTGTGTTCTGGAGTGGACTTGGCCAATTGTAAAGCATGGGATTCGCGTTAAGGATGGGGGAAAGAAACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652599.1
CDS TCA 72 bp CAGGCAAAAACCCATTGGGATCACATTCAAAGCCAATaGAATGAGCTGTGTACTCTGGATGTATTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: QAKTHWDHIQSQ*NELCTLDVFEV
Trigger: GACCTCAAATACATCCAGAGTACACAGCTCATTTCATTGGCTTTGAATGTGATCCCAATGGGTTTTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS GCA 72 bp CTGGATGTATTTGAGGTCAATTCCACTAAAAGTATATaGAACCAGGGCATTACGCAGAATCCTCACAGAGGA +
Preference number: 6 (lower is better)
Translates to: LDVFEVNSTKSI*NQGITQNPHRG
Trigger: TCCTCTGTGAGGATTCTGCGTAATGCCCTGGTTGCATATACTTTTAGTGGAATTGACCTCAAATACATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CAA 90 bp ATCACATTCAAAGCCAATGAAATGAGCTGTGTACTCTGGATGTATTaGAGGTCAATTCCACTAAAAGTATATGCAACCAGGGCATTACGC +
Preference number: 6 (lower is better)
Translates to: ITFKANEMSCVLWMY*RSIPLKVYATRALR
Trigger: GCGTAATGCCCTGGTTGCATATACTTTTAGTGGAATTGACCTCAAATACATCCAGAGTACACAGCTCATTTCATTGGCTTTGAATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1
CDS CCA 72 bp ATCACATTCAAAGCCAATGAAATGAGCTGTGTACTCTaGATGTATTTGAGGTCAATTCCACTAAAAGTATAT +
Preference number: 6 (lower is better)
Translates to: ITFKANEMSCVL*MYLRSIPLKVY
Trigger: ATATACTTTTAGTGGAATTGACCTCAAATACATCCAGAGTACACAGCTCATTTCATTGGCTTTGAATGTGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575666.1
ENST00000650806.1