RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPZA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000177938

Ensembl transcript IDs: ENST00000317658.5

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TTTCCATCGATGCAGAGTGGTACAGAATATTTTTGGCAGTGTTGGTaGCCTGCACACTCACCTTGGTGGTGCATAAGTTTTTCATCACGG +
Preference number: 5 (lower is better)
Translates to: FPSMQSGTEYFWQCW*PAHSPWWCISFSSR
Trigger: CCGTGATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 90 bp AAGAGTACTGGATTTCCATCGATGCAGAGTGGTACAGAATATTTTTaGCAGTGTTGGTGGCCTGCACACTCACCTTGGTGGTGCATAAGT +
Preference number: 5 (lower is better)
Translates to: KSTGFPSMQSGTEYF*QCWWPAHSPWWCIS
Trigger: ACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCCAGTACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS GCA 90 bp CCTAATTTAGGATACATCACCAGATTCAAGTCAGAGAGTATCCTGTaGCAGTCAATAAGAGTGCGGGTCACTGGAAGATCCCTTCGTAGA +
Preference number: 5 (lower is better)
Translates to: PNLGYITRFKSESIL*QSIRVRVTGRSLRR
Trigger: TCTACGAAGGGATCTTCCAGTGACCCGCACTCTTATTGACTGGCACAGGATACTCTCTGACTTGAATCTGGTGATGTATCCTAAATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 90 bp GGATTTCCATCGATGCAGAGTGGTACAGAATATTTTTGGCAGTGTTaGTGGCCTGCACACTCACCTTGGTGGTGCATAAGTTTTTCATCA +
Preference number: 5 (lower is better)
Translates to: GFPSMQSGTEYFWQC*WPAHSPWWCISFSS
Trigger: TGATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS TCA 90 bp AGGCGCACAGAAGAACAACTCTCAGGTATTCTGCCTCATTCTGAATaGTACCATGACTTTGGATGTCTTTCAGCTGATTTTGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: RRTEEQLSGILPHSE*YHDFGCLSADFEAG
Trigger: ACCTGCTTCAAAATCAGCTGAAAGACATCCAAAGTCATGGTATCATTCAGAATGAGGCAGAATACCTGAGAGTTGTTCTTCTGTGCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 90 bp GGGTCACTGGAAGATCCCTTCGTAGAATTTTTCTCAGGGCTTCATTaGATAACTCCTGTAATTCTTCCAAGACTGCAGCTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: GSLEDPFVEFFSGLH*ITPVILPRLQLEIC
Trigger: ACAAATTTCAAGCTGCAGTCTTGGAAGAATTACAGGAGTTATCCAATGAAGCCCTGAGAAAAATTCTACGAAGGGATCTTCCAGTGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 90 bp TCCCCTGGAGGGGCCTGTAATAACAGTCTGCGAATTACTCTTTCCTaGTCCTTCCTGCTCAGCACGCTAAGTGTCATGTTTGGTTGCAAC +
Preference number: 6 (lower is better)
Translates to: SPGGACNNSLRITLS*SFLLSTLSVMFGCN
Trigger: GTTGCAACCAAACATGACACTTAGCGTGCTGAGCAGGAAGGACAAGGAAAGAGTAATTCGCAGACTGTTATTACAGGCCCCTCCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS GCA 72 bp TGGCAGTGTTGGTGGCCTGCACACTCACCTTGGTGGTaGATAAGTTTTTCATCACGGATAAGCAGACAGAGA +
Preference number: 6 (lower is better)
Translates to: WQCWWPAHSPWW*ISFSSRISRQR
Trigger: TCTCTGTCTGCTTATCCGTGATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 72 bp GGATTTCCATCGATGCAGAGTGGTACAGAATATTTTTaGCAGTGTTGGTGGCCTGCACACTCACCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: GFPSMQSGTEYF*QCWWPAHSPWW
Trigger: CCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 72 bp TTTTGGCAGTGTTGGTGGCCTGCACACTCACCTTGGTaGTGCATAAGTTTTTCATCACGGATAAGCAGACAG +
Preference number: 6 (lower is better)
Translates to: FWQCWWPAHSPW*CISFSSRISRQ
Trigger: CTGTCTGCTTATCCGTGATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 72 bp TGGATTTCCATCGATGCAGAGTGGTACAGAATATTTTaGGCAGTGTTGGTGGCCTGCACACTCACCTTGGTG +
Preference number: 6 (lower is better)
Translates to: WISIDAEWYRIF*AVLVACTLTLV
Trigger: CACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 90 bp CAAGAGTACTGGATTTCCATCGATGCAGAGTGGTACAGAATATTTTaGGCAGTGTTGGTGGCCTGCACACTCACCTTGGTGGTGCATAAG +
Preference number: 6 (lower is better)
Translates to: QEYWISIDAEWYRIF*AVLVACTLTLVVHK
Trigger: CTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCCAGTACTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS GCA 72 bp TTACAAATTCCCCTGGAGGGGCCTGTAATAACAGTCTaGGAATTACTCTTTCCTTGTCCTTCCTGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: LQIPLEGPVITV*ELLFPCPSCSA
Trigger: TGCTGAGCAGGAAGGACAAGGAAAGAGTAATTCGCAGACTGTTATTACAGGCCCCTCCAGGGGAATTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 72 bp GGGGCCTGTAATAACAGTCTGCGAATTACTCTTTCCTaGTCCTTCCTGCTCAGCACGCTAAGTGTCATGTTT +
Preference number: 6 (lower is better)
Translates to: GACNNSLRITLS*SFLLSTLSVMF
Trigger: AAACATGACACTTAGCGTGCTGAGCAGGAAGGACAAGGAAAGAGTAATTCGCAGACTGTTATTACAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 90 bp TGGATTTCCATCGATGCAGAGTGGTACAGAATATTTTTGGCAGTGTaGGTGGCCTGCACACTCACCTTGGTGGTGCATAAGTTTTTCATC +
Preference number: 6 (lower is better)
Translates to: WISIDAEWYRIFLAV*VACTLTLVVHKFFI
Trigger: GATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 72 bp TATTTTTGGCAGTGTTGGTGGCCTGCACACTCACCTTaGTGGTGCATAAGTTTTTCATCACGGATAAGCAGA +
Preference number: 6 (lower is better)
Translates to: YFWQCWWPAHSP*WCISFSSRISR
Trigger: TCTGCTTATCCGTGATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 72 bp ATATTTTTGGCAGTGTTGGTGGCCTGCACACTCACCTaGGTGGTGCATAAGTTTTTCATCACGGATAAGCAG +
Preference number: 6 (lower is better)
Translates to: IFLAVLVACTLT*VVHKFFITDKQ
Trigger: CTGCTTATCCGTGATGAAAAACTTATGCACCACCAAGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS TCA 72 bp TGCTCTTCCACAAGCCTTGCAAAACTTAGAGCCAGTTaGGCTTGGTTAACTATTTCCAAGCTTTCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: CSSTSLAKLRAS*AWLTISKLSFR
Trigger: CCTGAAAGAAAGCTTGGAAATAGTTAACCAAGCTCAACTGGCTCTAAGTTTTGCAAGGCTTGTGGAAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS GCA 72 bp CATTGTGGTGAGACAAGAGTACTGGATTTCCATCGATaGAGAGTGGTACAGAATATTTTTGGCAGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: HCGETRVLDFHR*RVVQNIFGSVG
Trigger: ACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCCAGTACTCTTGTCTCACCACAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 72 bp GTAGTCGCCCATTACATTGTGGTGAGACAAGAGTACTaGATTTCCATCGATGCAGAGTGGTACAGAATATTT +
Preference number: 6 (lower is better)
Translates to: VVAHYIVVRQEY*ISIDAEWYRIF
Trigger: AAATATTCTGTACCACTCTGCATCGATGGAAATCCAGTACTCTTGTCTCACCACAATGTAATGGGCGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CCA 72 bp GAAGATCCCTTCGTAGAATTTTTCTCAGGGCTTCATTaGATAACTCCTGTAATTCTTCCAAGACTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: EDPFVEFFSGLH*ITPVILPRLQL
Trigger: AAGCTGCAGTCTTGGAAGAATTACAGGAGTTATCCAATGAAGCCCTGAGAAAAATTCTACGAAGGGATCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317658.5
CDS CAA 90 bp CTCATTCTGAATGATACCATGACTTTGGATGTCTTTCAGCTGATTTaGAAGCAGGTCATATTTGAAAGAAAGTTTGCTTTGATGGTCAAA +
Preference number: 6 (lower is better)
Translates to: LILNDTMTLDVFQLI*KQVIFERKFALMVK
Trigger: TTTGACCATCAAAGCAAACTTTCTTTCAAATATGACCTGCTTCAAAATCAGCTGAAAGACATCCAAAGTCATGGTATCATTCAGAATGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317658.5