Pregenerated sensors for CAPSL (Homo sapiens)
Ensembl gene IDs: ENSG00000152611Ensembl transcript IDs: ENST00000397366.5, ENST00000397367.6, ENST00000513623.5, ENST00000514524.2, ENST00000651391.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCTCATTTGGAGCCACATaGCTGTCCCAGGGCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLRQGKLTVGYSMSFISASFGAT*LSQGLV Trigger: GACCAGGCCCTGGGACAGCCATGTGGCTCCAAATGA...GGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| 3UTR-3UTR TCA 90 bp | TTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCTGTTTTCTGGTTTTTGAGCTaGCATTTAGTCATTTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LGKANSQLATQCLLFLPVFWFLS*HLVIWS Trigger: GCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAA...AACAGGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | AGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCGGTCGGTGGCCGTGGTaGGCTTTTTCTTGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLRQGKLTVGYSMSFISAGRWPW*AFSWPG Trigger: TCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACC...GGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | ACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGGCCATCTCTCGGTCATaGCGCGCTGTCCCTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: TVLGKANSQLATQCLLFLAISRS*RAVPAI Trigger: GATGGCAGGGACAGCGCGCCATGACCGAGAGATGGC...CAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAATGGCGCGCTGTCCCTaGCATCTGTCTTCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQMARCP*HLSSSG Trigger: CCCTGAGGAAGACAGATGGCAGGGACAGCGCGCCAT...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS-3UTR GCA 90 bp | AGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCCCCCTGGCCAGGCACTaGAGTCGGAGTCTTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: SLRQGKLTVGYSMSFISAPLARH*SRSLSM Trigger: CATTGAAAGACTCCGACTGCAGTGCCTGGCCAGGGG...GGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | TTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCTGTTCCCCTGGCCAGGCACTaGAGTCGGAGTCTTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LGKANSQLATQCLLFLPVPLARH*SRSLSM Trigger: CATTGAAAGACTCCGACTGCAGTGCCTGGCCAGGGG...AACAGGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATCATTTGGAGCCACATaGCTGTCCCAGGGCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQSFGAT*LSQGLV Trigger: GACCAGGCCCTGGGACAGCCATGTGGCTCCAAATGA...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCCCCTGGCCAGGCACTaGAGTCGGAGTCTTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: YFRTKETVLGKANSQLATPLARH*SRSLSM Trigger: CATTGAAAGACTCCGACTGCAGTGCCTGGCCAGGGG...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATGCCATCTCTCGGTCATaGCGCGCTGTCCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHAISRS*RAVPAI Trigger: GATGGCAGGGACAGCGCGCCATGACCGAGAGATGGC...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATGGTCGGTGGCCGTGGTaGGCTTTTTCTTGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHGRWPW*AFSWPG Trigger: TCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACC...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | AGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCCCAGTTGCTTCGAACTaGAACTATGGACGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLRQGKLTVGYSMSFISAPVASN*NYGRCL Trigger: GAGACAGCGTCCATAGTTTCAGTTCGAAGCAACTGG...GGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | AGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCCTTCCTCAGGGGCCCTaGTCCACTCTCTTAGTATTA | + |
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Preference number: 4 (lower is better) Translates to: SLRQGKLTVGYSMSFISALPQGP*STLLVL Trigger: TAATACTAAGAGAGTGGACCAGGGCCCCTGAGGAAG...GGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS-3UTR TCA 90 bp | TTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCTGTTCTGCATAGTAGTTCATaGACTCCTCAGGGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKANSQLATQCLLFLPVLHSSS*TPQGSP Trigger: TGGTGACCCCTGAGGAGTTCATGAACTACTATGCAG...AACAGGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATTCATTTGGAGCCACATaGCTGTCCCAGGGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHSFGAT*LSQGLV Trigger: GACCAGGCCCTGGGACAGCCATGTGGCTCCAAATGA...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAGGATGCGCTCACACCTaGATAGTAGTTCATGAACTC | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQGCAHT*IVVHEL Trigger: GAGTTCATGAACTACTATGCAGGTGTGAGCGCATCC...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTAGCTTTTTCTTGGCCTaGATCGCCATCTCTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFRTKETVLGKANSQLATSFFLA*IAISRS Trigger: TGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCT...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | AGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCCCTCTTTTCTGGCTCTaGACATTGGAGGTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRQGKLTVGYSMSFISAPLFWL*TLEVLM Trigger: CATTAAGACCTCCAATGTCCAGAGCCAGAAAAGAGG...GGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATTGCAGATTCACAGCCTaGTTGGCTCAGCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHCRFTA*LAQLTV Trigger: GACAGTGAGCTGAGCCAATCAGGCTGTGAATCTGCA...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS-3UTR TCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACTGCATAGTAGTTCATaGACTCCTCAGGGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPLHSSS*TPQGSP Trigger: TGGTGACCCCTGAGGAGTTCATGAACTACTATGCAG...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACCAGTTGCTTCGAACTaGAACTATGGACGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPPVASN*NYGRCL Trigger: GAGACAGCGTCCATAGTTTCAGTTCGAAGCAACTGG...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | ACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGATCAGTGTCAATGGATaGGCTCACACCTGCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: TVLGKANSQLATQCLLFLISVNG*AHTCIV Trigger: TACTATGCAGGTGTGAGCGCATCCATTGACACTGAT...CAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | ACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCTCTTTTCTGGCTCTaGACATTGGAGGTCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: TVLGKANSQLATQCLLFLPLFWL*TLEVLM Trigger: CATTAAGACCTCCAATGTCCAGAGCCAGAAAAGAGG...CAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGCCTGTTCCTCTTTTCTGGCTCTaGACATTGGAGGTCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: LGKANSQLATQCLLFLPVPLFWL*TLEVLM Trigger: CATTAAGACCTCCAATGTCCAGAGCCAGAAAAGAGG...AACAGGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAACTCCATTCCCCATTCTaGTACTTTGGGTGGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQLHSPF*YFGWCF Trigger: AAAACACCACCCAAAGTACCAGAATGGGGAATGGAG...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | ACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGTTCGAACTGAAACTATaGACGCTGTCTCCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: TVLGKANSQLATQCLLFLFELKL*TLSPAS Trigger: AGATGCAGGAGACAGCGTCCATAGTTTCAGTTCGAA...CAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCCTTTTGCCACCAGTTaGTTCGAACTGAAACTATGG | + |
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Preference number: 4 (lower is better) Translates to: YFRTKETVLGKANSQLATPFATS*FELKLW Trigger: CCATAGTTTCAGTTCGAAGCAACTGGTGGCAAAAGG...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTATTAATTGGAGGACCTaGGATCACTGCTGCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: YFRTKETVLGKANSQLATINWRT*DHCCRF Trigger: GAATCTGCAGCAGTGATCCCAGGTCCTCCAATTAAT...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS-3UTR CCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATCTCTTAGTATTAATTaGAGGACCTGGGATCACTGC | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQSLSIN*RTWDHC Trigger: GCAGTGATCCCAGGTCCTCCAATTAATACTAAGAGA...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS-3UTR CCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATAGCTTTTTCTTGGCCTaGATCGCCATCTCTCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHSFFLA*IAISRS Trigger: TGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCT...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTTTCGAACTGAAACTATaGACGCTGTCTCCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: YFRTKETVLGKANSQLATFELKL*TLSPAS Trigger: AGATGCAGGAGACAGCGTCCATAGTTTCAGTTCGAA...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACCTTTTGCCACCAGTTaGTTCGAACTGAAACTATGG | + |
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Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPPFATS*FELKLW Trigger: CCATAGTTTCAGTTCGAAGCAACTGGTGGCAAAAGG...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACTCCATTCCCCATTCTaGTACTTTGGGTGGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPLHSPF*YFGWCF Trigger: AAAACACCACCCAAAGTACCAGAATGGGGAATGGAG...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAACCTCTTCTTTTTCCATaGCCACAGCATAATCATTTA | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQPLLFP*PQHNHL Trigger: TAAATGATTATGCTGTGGTCATGGAAAAAGAAGAGG...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTTTCTGGTTTTTGAGCTaGCATTTAGTCATTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: YFRTKETVLGKANSQLATFWFLS*HLVIWS Trigger: GCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAA...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR GCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATATCAGTGTCAATGGATaGGCTCACACCTGCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHISVNG*AHTCIV Trigger: TACTATGCAGGTGTGAGCGCATCCATTGACACTGAT...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATCTCCATTCCCCATTCTaGTACTTTGGGTGGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHLHSPF*YFGWCF Trigger: AAAACACCACCCAAAGTACCAGAATGGGGAATGGAG...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAAGGCAAACTCACAGTTaGCTACTCAATGTCTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: FRTKETVLGKANSQLATQRQTHS*LLNVFY Trigger: ATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCT...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| 3UTR CAA 72 bp | ACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTaGGCTACTCAATGTCTTTTATTTCTGCCTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: TKETVLGKANSQ*ATQCLLFLPVF Trigger: AAAAACAGGCAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCATTCTGGTTTTTGAGCTaGCATTTAGTCATTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPFWFLS*HLVIWS Trigger: GCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAA...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACCTCTTCTTTTTCCATaGCCACAGCATAATCATTTA | + |
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Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPPLLFP*PQHNHL Trigger: TAAATGATTATGCTGTGGTCATGGAAAAAGAAGAGG...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR TCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATTTCTGGTTTTTGAGCTaGCATTTAGTCATTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHFWFLS*HLVIWS Trigger: GCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAA...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCAAGGCAAACTCACAGTTaGCTACTCAATGTCTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: VKSNTILVFELTFSHLEPRQTHS*LLNVFY Trigger: ATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCT...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CCA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATAGGCAAACTCACAGTTaGCTACTCAATGTCTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: KSNTILVFELTFSHLEPHRQTHS*LLNVFY Trigger: ATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCT...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS TCA 90 bp | CCAGGCACTGCAGTCGGAGTCTTTCAATGGGGTCGGTGGCCGTGGTaGGCTTTTTCTTGGCCTGGATCGCCATCTCTCGGTCATGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: PGTAVGVFQWGRWPW*AFSWPGSPSLGHGA Trigger: CGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACCCCATTGAAAGACTCCGACTGCAGTGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS GCA 90 bp | ACTCTGCCAAGTCCTTTGATCCCAGCAGAGCCCCTGGCCAGGCACTaGAGTCGGAGTCTTTCAATGGGGTCGGTGGCCGTGGTGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TLPSPLIPAEPLARH*SRSLSMGSVAVVSF Trigger: AAAGCTCACCACGGCCACCGACCCCATTGAAAGACTCCGACTGCAGTGCCTGGCCAGGGGCTCTGCTGGGATCAAAGGACTTGGCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CCA 90 bp | AGTCTTTCAATGGGGTCGGTGGCCGTGGTGAGCTTTTTCTTGGCCTaGATCGCCATCTCTCGGTCATGGCGCGCTGTCCCTGCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: SLSMGSVAVVSFFLA*IAISRSWRAVPAIC Trigger: ACAGATGGCAGGGACAGCGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACCCCATTGAAAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS CCA 90 bp | AGTCTTTCAATGGGGTCGGTGGCCGTGGTGAGCTTTTTCTTGGCCTaGATCGCCATCTCTCGGTCATGGCGCGCTGTCCCTGCCATCTTA | + |
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Preference number: 5 (lower is better) Translates to: SLSMGSVAVVSFFLA*IAISRSWRAVPAIL Trigger: TAAGATGGCAGGGACAGCGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACCCCATTGAAAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000397366.5 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CCA 90 bp | GAGCTGACATTTAGTCATTTGGAGCCACATGGCTGTCCCAGGGCCTaGTCCCCAGGTCATGTGCTTAAAGCTTCCAGGCGGTTCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: ELTFSHLEPHGCPRA*SPGHVLKASRRFSS Trigger: TGATGAGAACCGCCTGGAAGCTTTAAGCACATGACCTGGGGACCAGGCCCTGGGACAGCCATGTGGCTCCAAATGACTAAATGTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS TCA 90 bp | CCTGCCATCTTAAATGCTAACCTTTTGCCACCAGTTGCTTCGAACTaGAACTATGGACGCTGTCTCCTGCATCTAGGAAAACTGGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: PAILNANLLPPVASN*NYGRCLLHLGKLVP Trigger: AGGGACCAGTTTTCCTAGATGCAGGAGACAGCGTCCATAGTTTCAGTTCGAAGCAACTGGTGGCAAAAGGTTAGCATTTAAGATGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000397366.5 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS GCA 90 bp | CATGATGATGAAGTACACATCAGTGTCAATGGATGCGCTCACACCTaGATAGTAGTTCATGAACTCCTCAGGGGTCACCAATCCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: HDDEVHISVNGCAHT*IVVHELLRGHQSIF Trigger: AAAGATGGATTGGTGACCCCTGAGGAGTTCATGAACTACTATGCAGGTGTGAGCGCATCCATTGACACTGATGTGTACTTCATCATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAGTGGTGAGCTTTTTCTaGGCCTGGATCGCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: FRTKETVLGKANSQLATQVVSFF*AWIAIS Trigger: AGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCAC...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | AAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCACATGTGGTGAGCTTTTTCTaGGCCTGGATCGCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: KSNTILVFELTFSHLEPHVVSFF*AWIAIS Trigger: AGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCAC...ATGTGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAACCTTTTGCCACCAGTaGCTTCGAACTGAAACTATG | + |
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Preference number: 5 (lower is better) Translates to: FRTKETVLGKANSQLATQTFCHQ*LRTETM Trigger: CATAGTTTCAGTTCGAAGCAACTGGTGGCAAAAGGT...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS GCA 90 bp | TTGTTCCTCACTCCATTCCCCATTCTGGTACTTTGGGTGGTGTTTTaGATTATATACTTCACGAAGGTCTTCGATTGTTATAACACCATC | + |
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Preference number: 5 (lower is better) Translates to: LFLTPFPILVLWVVF*IIYFTKVFDCYNTI Trigger: GATGGTGTTATAACAATCGAAGACCTTCGTGAAGTATATAATGCAAAACACCACCCAAAGTACCAGAATGGGGAATGGAGTGAGGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAAAATTTCCTAAATACTaGTTCCTCACTCCATTCCCC | + |
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Preference number: 5 (lower is better) Translates to: FRTKETVLGKANSQLATQKFPKY*FLTPFP Trigger: GGGGAATGGAGTGAGGAACAAGTATTTAGGAAATTT...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | ACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGAAGGCAAACTCACAGTaGGCTACTCAATGTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: TVLGKANSQLATQCLLFLKANSQ*ATQCLL Trigger: TAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTT...CAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCAACCTTTTGCCACCAGTaGCTTCGAACTGAAACTATG | + |
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Preference number: 5 (lower is better) Translates to: VKSNTILVFELTFSHLEPTFCHQ*LRTETM Trigger: CATAGTTTCAGTTCGAAGCAACTGGTGGCAAAAGGT...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | TTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAAACTTTGGGTGGTGTTTaGCATTATATACTTCACGAA | + |
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Preference number: 5 (lower is better) Translates to: FRTKETVLGKANSQLATQTLGGV*HYILHE Trigger: TTCGTGAAGTATATAATGCAAAACACCACCCAAAGT...TTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | ACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTCAATGTCTTTTATTTCTGACTTTGGGTGGTGTTTaGCATTATATACTTCACGAA | + |
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Preference number: 5 (lower is better) Translates to: TVLGKANSQLATQCLLFLTLGGV*HYILHE Trigger: TTCGTGAAGTATATAATGCAAAACACCACCCAAAGT...CAGAAATAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTAAGGCAAACTCACAGTaGGCTACTCAATGTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: YFRTKETVLGKANSQLATKANSQ*ATQCLL Trigger: TAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTT...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCATTAAATGCTAACCTTTaGCCACCAGTTGCTTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: VKSNTILVFELTFSHLEPLNANL*PPVASN Trigger: GTTCGAAGCAACTGGTGGCAAAAGGTTAGCATTTAA...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397366.5 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | TATTTTAGAACAAAGGAAACAGTCTTAGGCAAGGCAAACTCACAGTTGGCTACTACTTTGGGTGGTGTTTaGCATTATATACTTCACGAA | + |
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Preference number: 5 (lower is better) Translates to: YFRTKETVLGKANSQLATTLGGV*HYILHE Trigger: TTCGTGAAGTATATAATGCAAAACACCACCCAAAGT...AGTAGCCAACTGTGAGTTTGCCTTGCCTAAGACTGTTTCCTTTGTTCTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCAAAATTTCCTAAATACTaGTTCCTCACTCCATTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VKSNTILVFELTFSHLEPKFPKY*FLTPFP Trigger: GGGGAATGGAGTGAGGAACAAGTATTTAGGAAATTT...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS-3UTR CAA 90 bp | GTGAAATCAAATACGATTCTGGTTTTTGAGCTGACATTTAGTCATTTGGAGCCAAAGGCAAACTCACAGTaGGCTACTCAATGTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: VKSNTILVFELTFSHLEPKANSQ*ATQCLL Trigger: TAAAAGACATTGAGTAGCCAACTGTGAGTTTGCCTT...TGGCTCCAAATGACTAAATGTCAGCTCAAAAACCAGAATCGTATTTGATTTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS CCA 72 bp | ATGGGGTCGGTGGCCGTGGTGAGCTTTTTCTTGGCCTaGATCGCCATCTCTCGGTCATGGCGCGCTGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: MGSVAVVSFFLA*IAISRSWRAVP Trigger: AGGGACAGCGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CAA 90 bp | AGTCGGAGTCTTTCAATGGGGTCGGTGGCCGTGGTGAGCTTTTTCTaGGCCTGGATCGCCATCTCTCGGTCATGGCGCGCTGTCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRSLSMGSVAVVSFF*AWIAISRSWRAVPA Trigger: GGCAGGGACAGCGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACCCCATTGAAAGACTCCGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CCA 72 bp | AGCTTTTTCTTGGCCTGGATCGCCATCTCTCGGTCATaGCGCGCTGTCCCTGCCATCTGTCTTCCTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SFFLAWIAISRS*RAVPAICLPQG Trigger: CCCCTGAGGAAGACAGATGGCAGGGACAGCGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397367.6 |
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| CDS TCA 72 bp | GCAGTCGGAGTCTTTCAATGGGGTCGGTGGCCGTGGTaGGCTTTTTCTTGGCCTGGATCGCCATCTCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: AVGVFQWGRWPW*AFSWPGSPSLG Trigger: ACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCTCACCACGGCCACCGACCCCATTGAAAGACTCCGACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CCA 72 bp | TTTAGTCATTTGGAGCCACATGGCTGTCCCAGGGCCTaGTCCCCAGGTCATGTGCTTAAAGCTTCCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: FSHLEPHGCPRA*SPGHVLKASRR Trigger: CCGCCTGGAAGCTTTAAGCACATGACCTGGGGACCAGGCCCTGGGACAGCCATGTGGCTCCAAATGACTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS CCA 72 bp | AGCTTTTTCTTGGCCTGGATCGCCATCTCTCGGTCATaGCGCGCTGTCCCTGCCATCTTAAATGCTAACCTT | + |
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Preference number: 6 (lower is better) Translates to: SFFLAWIAISRS*RAVPAILNANL Trigger: AAGGTTAGCATTTAAGATGGCAGGGACAGCGCGCCATGACCGAGAGATGGCGATCCAGGCCAAGAAAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000397366.5 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS GCA 72 bp | GAAGTACACATCAGTGTCAATGGATGCGCTCACACCTaGATAGTAGTTCATGAACTCCTCAGGGGTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: EVHISVNGCAHT*IVVHELLRGHQ Trigger: TTGGTGACCCCTGAGGAGTTCATGAACTACTATGCAGGTGTGAGCGCATCCATTGACACTGATGTGTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000651391.1 |
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| CDS TCA 72 bp | TTAAATGCTAACCTTTTGCCACCAGTTGCTTCGAACTaGAACTATGGACGCTGTCTCCTGCATCTAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LNANLLPPVASN*NYGRCLLHLGK Trigger: TTTTCCTAGATGCAGGAGACAGCGTCCATAGTTTCAGTTCGAAGCAACTGGTGGCAAAAGGTTAGCATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000397366.5 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CAA 72 bp | CACTCCATTCCCCATTCTGGTACTTTGGGTGGTGTTTaGCATTATATACTTCACGAAGGTCTTCGATTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HSIPHSGTLGGV*HYILHEGLRLL Trigger: TAACAATCGAAGACCTTCGTGAAGTATATAATGCAAAACACCACCCAAAGTACCAGAATGGGGAATGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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| CDS CAA 90 bp | TATACTTCACGAAGGTCTTCGATTGTTATAACACCATCTCCAGTCTaGTCTAACTTTCTAAAAGCTTGCATGATTACCTCTTTTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: YTSRRSSIVITPSPV*SNFLKACMITSFLA Trigger: AGCCAGAAAAGAGGTAATCATGCAAGCTTTTAGAAAGTTAGACAAGACTGGAGATGGTGTTATAACAATCGAAGACCTTCGTGAAGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000397366.5 ENST00000397367.6 ENST00000513623.5 ENST00000514524.2 ENST00000651391.1 |
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