RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000180881

Ensembl transcript IDs: ENST00000328705.7, ENST00000336815.10, ENST00000393284.7, ENST00000409004.5, ENST00000409445.7, ENST00000409799.5, ENST00000436898.5, ENST00000486196.1, ENST00000493070.1, ENST00000547320.1, ENST00000548035.1, ENST00000548958.2, ENST00000551829.5, ENST00000552497.5

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCAAGTCGGCTCTTCCATCTTCTCCTGCCTGGTTTATTCTAGCTaGCAGCCGATTGGATGTTGCCCACCCACATTGAGGTGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: QQVGSSIFSCLVYSS*QPIGCCPPTLRWVC
Trigger: GCAGACCCACCTCAATGTGGGTGGGCAACATCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGATGGAAGAGCCGACTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR GCA 90 bp ATCTTCTCCTGCCTGGTTTATTCTAGCTGGCAGCCGATTGGATGTTaGCCACCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTGCT +
Preference number: 1 (lower is better)
Translates to: IFSCLVYSSWQPIGC*PPTLRWVCFSQFTA
Trigger: AGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACATCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR GCA 90 bp TCTGGATCACTGATGACAGCCCTAGATAAGTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTCTTCTTCTCTGCAGCCACAATTTCC +
Preference number: 1 (lower is better)
Translates to: SGSLMTALDKWSIIT*SATICFFFSAATIS
Trigger: GGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR GCA 90 bp AGAGCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTaGAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATAT +
Preference number: 1 (lower is better)
Translates to: RASSHDQKRIHPCPP*RLSLLFSCLAYFIY
Trigger: ATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
3UTR-3UTR CCA 90 bp TTCTTGCCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATAACCTTGCTGTAAGATCGTGGGACCACTGGTaGGCAAGAATTCTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: FLPSVVYRKSCLHNLAVRSWDHW*ARILVC
Trigger: ACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGA...TCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR CCA 90 bp TTCTTGCCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATAACCTTGCTGTAAGAAAGTCGTGGGACCACTaGTGGGCAAGAATTCTGGTT +
Preference number: 2 (lower is better)
Translates to: FLPSVVYRKSCLHNLAVRKSWDH*WARILV
Trigger: AACCAGAATTCTTGCCCACCAGTGGTCCCACGACTT...TCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGACTGGAGTCTGATGTTTaGGGGCAGGAAGCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRLESDV*GQEASS
Trigger: GCTGGATGCTTCCTGCCCTCAAACATCAGACTCCAG...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR GCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTACATTGAGGTGGGTCTaGTTTTCCCAGTTCACTGCT +
Preference number: 2 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFTLRWV*FSQFTA
Trigger: AGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGT...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR CCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTTCCCAAATCAAGTCGTaGGACCACTGGTGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSSQIKS*DHWWAR
Trigger: TCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGA...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR TCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCACCTGGTAAACCACTaGTGTAAATCCGAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLHLVNH*CKSESP
Trigger: TGGACTCTCGGATTTACATCAGTGGTTTACCAGGTG...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR TCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTGTCCCATCTGTAAGTTaGGAAGCAAGGAAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSVPSVS*EARKPA
Trigger: TGCTGGCTTCCTTGCTTCTCAACTTACAGATGGGAC...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR CAA 90 bp TGCTGTAAGATGGCTTTCCTATCCAGAGTCGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACACACTTTTCATCTATCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: CCKMAFLSRVVRSSV*ASSSCTHFSSILFL
Trigger: AAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR GCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTCTTTTCCCAGTTCACTaGTCTCCTTTGGCAATACTC +
Preference number: 2 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSLFPVH*SPLAIL
Trigger: GAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAG...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR CCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSGGQEF*FVHDSE
Trigger: TTCTGAGTCATGGACAAACCAGAATTCTTGCCCACC...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR GCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCA +
Preference number: 2 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLCIQFS*PLLFIA
Trigger: TGCGATAAACAACAGAGGGCAAGAAAATTGGATGCA...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR GCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGACACTTCATCAGACTTaGTGCAGGCAACTTTTAATG +
Preference number: 2 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMTLHQT*CRQLLM
Trigger: CATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGT...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR TCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGGGCCTTTCGAACATATaGTTTCCTGTATTCATTCAT +
Preference number: 2 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMGLSNI*FPVFIH
Trigger: ATGAATGAATACAGGAAATCATATGTTCGAAAGGCC...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR CAA 90 bp TGCAACTTTGAATTTGTTGGGTTCACATGTATCACACTTCTCATGTaGCTGCCAAGTATAGATGGATACAGTGATATGTCTAAAGTCATA +
Preference number: 2 (lower is better)
Translates to: CNFEFVGFTCITLLM*LPSIDGYSDMSKVI
Trigger: TATGACTTTAGACATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAACAAATTCAAAGTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
3UTR-3UTR TCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTTCCTTGTCCAACTGTTaGAAATATTTTCCCAATCCA +
Preference number: 2 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSSLSNC*KYFPNP
Trigger: TGGATTGGGAAAATATTTTCAACAGTTGGACAAGGA...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
3UTR-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGATCAGACACTTCTAAGTaGAACACTTTTAGAGCTTGC +
Preference number: 2 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRSDTSK*NTFRAC
Trigger: GCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGA...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
3UTR-3UTR GCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCACTGTTTCTTCTTCTCTaGAGCCACAATTTCCAAATA +
Preference number: 2 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSLFLLL*SHNFQI
Trigger: TATTTGGAAATTGTGGCTGCAGAGAAGAAGAAACAG...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR GCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCAAAAATGTCAAGGTTaGACCTTTGTTTCATGTAGT +
Preference number: 2 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFQKCQG*TFVSCS
Trigger: ACTACATGAAACAAAGGTGCAACCTTGACATTTTTG...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336815.10
3UTR-3UTR CCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATTTTGTCTGTTGGTGCTaGCAAATTTTCAGGTATTAT +
Preference number: 2 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDFVCWC*QIFRYY
Trigger: ATAATACCTGAAAATTTGCCAGCACCAACAGACAAA...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGATGTTGCCATATTGTTTaGTGCAGATGTAACTTTCCT +
Preference number: 2 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRCCHIV*CRCNFP
Trigger: AGGAAAGTTACATCTGCATCAAACAATATGGCAACA...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
3UTR-3UTR GCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGATTGGCTTCTTCATCTTaGACACACTTTTCATCTATC +
Preference number: 2 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRLASSS*THFSSI
Trigger: GATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAA...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR GCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGACTTCATCAGACTTGCTaGAGGCAACTTTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRLHQTC*RQLLMF
Trigger: AAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAG...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
3UTR CCA 72 bp TGGCAGCCGATTGGATGTTGCCCACCCACATTGAGGTaGGTCTGCTTTTCCCAGTTCACTGCTCTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: WQPIGCCPPTLR*VCFSQFTALLW
Trigger: CCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACATCCAATCGGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR GCA 72 bp CCGATTGGATGTTGCCCACCCACATTGAGGTGGGTCTaGTTTTCCCAGTTCACTGCTCTCCTTTGGCAATAC +
Preference number: 3 (lower is better)
Translates to: PIGCCPPTLRWV*FSQFTALLWQY
Trigger: GTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACATCCAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR CCA 72 bp AGATTCAGCAAGTCGGCTCTTCCATCTTCTCCTGCCTaGTTTATTCTAGCTGGCAGCCGATTGGATGTTGCC +
Preference number: 3 (lower is better)
Translates to: RFSKSALPSSPA*FILAGSRLDVA
Trigger: GGCAACATCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGATGGAAGAGCCGACTTGCTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR CAA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATTGTTGCCCACCCACATaGAGGTGGGTCTGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNCCPPT*RWVCFS
Trigger: GGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACA...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR TCA 72 bp AAATGGAACGATATGTATGACAAGAGCCTCTTCTCATaGTCAGAAACGAATACATCCATGTCCACCCTGCAG +
Preference number: 3 (lower is better)
Translates to: KWNDMYDKSLFS*SETNTSMSTLQ
Trigger: CTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGCTCTTGTCATACATATCGTTCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
3UTR GCA 72 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTaGAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTAT +
Preference number: 3 (lower is better)
Translates to: SHDQKRIHPCPP*RLSLLFSCLAY
Trigger: ATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
3UTR-3UTR CAA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGGTGGTCTATCATCACTaGCTCTGCAACAATCTGTTT +
Preference number: 3 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMVVYHH*LCNNLF
Trigger: AAACAGATTGTTGCAGAGCAAGTGATGATAGACCAC...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR CAA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTGTCAAGGTTGCACCTTaGTTTCATGTAGTGTTCTTT +
Preference number: 3 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFVKVAP*FHVVFF
Trigger: AAAGAACACTACATGAAACAAAGGTGCAACCTTGAC...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336815.10
3UTR TCA 72 bp CTCACTGGCTTTGGGCCCAATTCTAATTTATCAAATTaGCCATGGTGGCAAATATATTCTGAGGAAGAGGTA +
Preference number: 3 (lower is better)
Translates to: LTGFGPNSNLSN*PWWQIYSEEEV
Trigger: TACCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGGGCCCAAAGCCAGTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
3UTR GCA 72 bp GTAAAAATGCTGACAACTTACTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATA +
Preference number: 3 (lower is better)
Translates to: VKMLTTYCIQFS*PLLFIARVVCI
Trigger: TATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGTAAGTTGTCAGCATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR-3UTR CAA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTTCCATAGAAGCAGTTTaGAGAGAATCCAAAGCTATT +
Preference number: 3 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLSIEAV*RESKAI
Trigger: AATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGA...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
3UTR-3UTR CAA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTTTCCTTGTCCAACTGTaGAAAATATTTTCCCAATCC +
Preference number: 3 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSFLVQL*KIFSQS
Trigger: GGATTGGGAAAATATTTTCAACAGTTGGACAAGGAA...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
3UTR GCA 72 bp AATCTTCAAATTCACCATATGACACTTCATCAGACTTaGTGCAGGCAACTTTTAATGTTTCTAGAAAGGATG +
Preference number: 3 (lower is better)
Translates to: NLQIHHMTLHQT*CRQLLMFLERM
Trigger: CATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CCA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCCCTAACTGGGATTCCTaGACAGGACAGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLPNWDS*TGQARG
Trigger: GCCCCTCGCCTGTCCTGTCCAGGAATCCCAGTTAGG...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR CCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTACTAACTGGGATTCCTaGACAGGACAGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSTNWDS*TGQARG
Trigger: GCCCCTCGCCTGTCCTGTCCAGGAATCCCAGTTAGT...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409799.5
CDS-3UTR TCA 90 bp GCTTTCCTATCCAGAGTCGTAAGGTCATCTGTGTTGGCTTCTTCATCTTGCACACTGGAGTCTGATGTTTaGGGGCAGGAAGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: AFLSRVVRSSVLASSSCTLESDV*GQEASS
Trigger: GCTGGATGCTTCCTGCCCTCAAACATCAGACTCCAG...TGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp ATCCGAGAGTCCAAAAGACGAAGAACCTGGAGTCTGATGTTTGAGGGCAGGAAGGTCCCATCTGTAAGTTaGGAAGCAAGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: IRESKRRRTWSLMFEGRKVPSVS*EARKPA
Trigger: TGCTGGCTTCCTTGCTTCTCAACTTACAGATGGGAC...CTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTCTTTTGGACTCTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp GCCGATTGGATGTTGCCCACCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTCAGACACTTCTAAGTaGAACACTTTTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ADWMLPTHIEVGLLFPVHSDTSK*NTFRAC
Trigger: GCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGA...GTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACATCCAATCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR CAA 72 bp CAAGTCGTGGGACCACTGGTGGGCAAGAATTCTGGTTaGTCCATGACTCAGAAGTCCACCTTTGATGATCTA +
Preference number: 4 (lower is better)
Translates to: QVVGPLVGKNSG*SMTQKSTFDDL
Trigger: TAGATCATCAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp GCCGATTGGATGTTGCCCACCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTGTTGCCATATTGTTTaGTGCAGATGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: ADWMLPTHIEVGLLFPVHCCHIV*CRCNFP
Trigger: AGGAAAGTTACATCTGCATCAAACAATATGGCAACA...GTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACATCCAATCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CCA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTCCCAAATCAAGTCGTaGGACCACTGGTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLSQIKS*DHWWAR
Trigger: TCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGA...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCCATCCCCTACCTAACTaGGATTCCTGGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLHPLPN*DSWTGQ
Trigger: CTGTCCTGTCCAGGAATCCCAGTTAGGTAGGGGATG...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR TCA 90 bp ATCCGAGAGTCCAAAAGACGAAGAACCTGGAGTCTGATGTTTGAGGGCAGGAAGCATCTTGAATTGCTTTaGAGACCAGCCTATCATTGG +
Preference number: 4 (lower is better)
Translates to: IRESKRRRTWSLMFEGRKHLELL*RPAYHW
Trigger: CCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATG...CTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTCTTTTGGACTCTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp ATCCGAGAGTCCAAAAGACGAAGAACCTGGAGTCTGATGTTTGAGGGCAGGAAGAAATGTAAGGACATGTaGACAGGCATACACATGCAC +
Preference number: 4 (lower is better)
Translates to: IRESKRRRTWSLMFEGRKKCKDM*TGIHMH
Trigger: GTGCATGTGTATGCCTGTTCACATGTCCTTACATTT...CTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTCTTTTGGACTCTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CCA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGTCCCAAATCAAGTCGTaGGACCACTGGTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLSQIKS*DHWWAR
Trigger: TCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGA...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTCTTCCAAAGAATGGCTaGATTTGGCTCCTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSLPKNG*IWLLEV
Trigger: CACTTCTAGGAGCCAAATTCAGCCATTCTTTGGAAG...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTATATGGAGTTTGACATaGTGTGACCCAGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSIWSLT*CDPAKS
Trigger: ACTCTTGGCTGGGTCACACCATGTCAAACTCCATAT...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR CCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTATGCAGTATACTAACTaGGATTCCTGGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSMQYTN*DSWTGQ
Trigger: CTGTCCTGTCCAGGAATCCCAGTTAGTATACTGCAT...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409799.5
CDS-3UTR TCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTCATCTTGAATTGCTTTaGAGACCAGCCTATCATTGG +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSHLELL*RPAYHW
Trigger: CCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATG...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTAAGAGCCTCTTCTCATaGTCAGAAACGAATACATCC +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSKSLFS*SETNTS
Trigger: GGATGTATTCGTTTCTGATCATGAGAAGAGGCTCTT...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGCTTTCTTCACTCTaGAGGTCTAGCTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFQLSSL*RSSFPL
Trigger: GAGGGGAAAGCTAGACCTGCAGAGTGAAGAAAGCTG...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CCA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCAACCTTGCTGTAAGATaGCTTTCCTATCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLNLAVR*LSYPES
Trigger: CGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTT...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGTCCCAAATCAAGTCGTaGGACCACTGGTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMSQIKS*DHWWAR
Trigger: TCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGA...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTAAGAGGTGTCATCTTTaGATCTGGAAGGATATGATC +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSKRCHL*IWKDMI
Trigger: GATCATATCCTTCCAGATTCAAAGATGACACCTCTT...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTTCTGGAAGGCTGAGATaGTCAGAACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSSGRLR*SELKNV
Trigger: GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGA...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTCCTTGCTGGTCAACCTaGAATTACTTGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSPCWST*NYLRML
Trigger: AAGCATTCTCAAGTAATTTCAGGTTGACCAGCAAGG...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTATGGAACGATATGTATaGCAAGAGCCTCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSMERYV*QEPLLM
Trigger: CATGAGAAGAGGCTCTTGTCATACATATCGTTCCAT...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGCAGCTTTCTTCACTCTaGAGGTCTAGCTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMQLSSL*RSSFPL
Trigger: GAGGGGAAAGCTAGACCTGCAGAGTGAAGAAAGCTG...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATTCGTGGGACCACTGGTaGGCAAGAATTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDSWDHW*ARILVC
Trigger: ACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGA...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGAAGTCGTGGGACCACTaGTGGGCAAGAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMKSWDH*WARILV
Trigger: AACCAGAATTCTTGCCCACCAGTGGTCCCACGACTT...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCAAGTCGTGGGACCACTaGTGGGCAAGAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITKSWDH*WARILV
Trigger: AACCAGAATTCTTGCCCACCAGTGGTCCCACGACTT...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
3UTR CAA 72 bp ATGGCTTTCCTATCCAGAGTCGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACACACTTTTCATCTATC +
Preference number: 4 (lower is better)
Translates to: MAFLSRVVRSSV*ASSSCTHFSSI
Trigger: GATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR CAA 72 bp CTGACAACTTACTGCATCCAATTTTCTTGCCCTCTGTaGTTTATCGCAAGAGTTGTCTGCATAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LTTYCIQFSCPL*FIARVVCITLL
Trigger: CAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGTAAGTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTCCTTGTCCAACTGTTaGAAATATTTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSSLSNC*KYFPNP
Trigger: TGGATTGGGAAAATATTTTCAACAGTTGGACAAGGA...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTCAGACACTTCTAAGTaGAACACTTTTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLSDTSK*NTFRAC
Trigger: GCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGA...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTGGCCTTTCGAACATATaGTTTCCTGTATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSGLSNI*FPVFIH
Trigger: ATGAATGAATACAGGAAATCATATGTTCGAAAGGCC...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTTCAGGTATTATGTTCTaGTCCTCATCATCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSSGIMF*SSSSES
Trigger: TGACTCTGATGATGAGGATCAGAACATAATACCTGA...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409799.5
CDS-3UTR TCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCAAGAGACAGTCAGCCTaGTTTCACCTAACAAGCTCG +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITKRQSA*FHLTSS
Trigger: CGAGCTTGTTAGGTGAAATCAGGCTGACTGTCTCTT...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTCAACCTGAAATTACTTaGGAATGCTTCTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSQPEIT*ECFFAQ
Trigger: CTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGTTG...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTCTCCATAATCAACCTTaGCATTGCCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSLHNQP*HCHCHS
Trigger: TGAATGACAATGGCAATGGCAAGGTTGATTATGGAG...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTGTTTCTTCTTCTCTaGAGCCACAATTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLLFLLL*SHNFCI
Trigger: GATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAG...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCCATCCATGTCCACCCTaGAGATTGTCTTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITHPCPP*RLSLLF
Trigger: GAAGAGCAAAGACAATCTGCAGGGTGGACATGGATG...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTTCGTGGGACCACTGGTaGGCAAGAATTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSSWDHW*ARILVC
Trigger: ACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGA...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTTCCCAAATCAAGTCGTaGGACCACTGGTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCSQIKS*DHWWAR
Trigger: TCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGA...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTGCTCTTCTCTTGCTTaGCTTATTTTATATATGCCC +
Preference number: 4 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSCSSLA*LILYMP
Trigger: GGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCA...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTTCTGGAAGGCTGAGATaGTCAGAACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFSGRLR*SELKNV
Trigger: GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGA...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp TTCTTGCCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATAACCTTGCTGTAAGATCTTTTAGCACATCTTaGATTGCTTTGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: FLPSVVYRKSCLHNLAVRSFSTS*IALKTS
Trigger: GCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGA...TCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTATATTCCGGGCTGTCTaGATTGTGGTAACACAAGTC +
Preference number: 4 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLIFRAV*IVVTQV
Trigger: GACTTGTGTTACCACAATTCAGACAGCCCGGAATAT...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCACACCTGGTAAACCACTaGTGTAAATCCGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSHLVNH*CKSESP
Trigger: TGGACTCTCGGATTTACATCAGTGGTTTACCAGGTG...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp CAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTAAGAGACAGTCAGCCTaGTTTCACCTAACAAGCTCG +
Preference number: 4 (lower is better)
Translates to: QIVFALLLLGLFYICPLPKRQSA*FHLTSS
Trigger: CGAGCTTGTTAGGTGAAATCAGGCTGACTGTCTCTT...AGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCCTTCCAAAGAATGGCTaGATTTGGCTCCTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITLPKNG*IWLLEV
Trigger: CACTTCTAGGAGCCAAATTCAGCCATTCTTTGGAAG...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATCTTTTCCCAGTTCACTaGTCTCCTTTGGCAATACTC +
Preference number: 4 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDLFPVH*SPLAIL
Trigger: GAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAG...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CCA 90 bp GCTTTCCTATCCAGAGTCGTAAGGTCATCTGTGTTGGCTTCTTCATCTTGCACATTTGTCTGTTGGTGCTaGCAAATTTTCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: AFLSRVVRSSVLASSSCTFVCWC*QIFRYY
Trigger: ATAATACCTGAAAATTTGCCAGCACCAACAGACAAA...TGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATAACCTTGCTGTAAGATaGCTTTCCTATCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNNLAVR*LSYPES
Trigger: CGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTT...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTAACCTTGCTGTAAGATaGCTTTCCTATCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFNLAVR*LSYPES
Trigger: CGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTT...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCAACCTTGCTGTAAGATaGCTTTCCTATCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITNLAVR*LSYPES
Trigger: CGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTT...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITGGQEF*FVHDSE
Trigger: TTCTGAGTCATGGACAAACCAGAATTCTTGCCCACC...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCTCGTGGGACCACTGGTaGGCAAGAATTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFSWDHW*ARILVC
Trigger: ACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGA...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTTCGTGGGACCACTGGTaGGCAAGAATTCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSSWDHW*ARILVC
Trigger: ACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGA...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCAAGTCGTGGGACCACTaGTGGGCAAGAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFKSWDH*WARILV
Trigger: AACCAGAATTCTTGCCCACCAGTGGTCCCACGACTT...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTATATGGAGTTTGACATaGTGTGACCCAGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFIWSLT*CDPAKS
Trigger: ACTCTTGGCTGGGTCACACCATGTCAAACTCCATAT...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393284.7
CDS-3UTR TCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTCTGGAAGGCTGAGATaGTCAGAACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFSGRLR*SELKNV
Trigger: GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp CCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTCATCTTGAATTGCTTTaGAGACCAGCCTATCATTGG +
Preference number: 4 (lower is better)
Translates to: PLSFRISHADSKSFSDTSHLELL*RPAYHW
Trigger: CCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATG...AGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTTGGCCTGAAATTACTTaGGAATGCTTCTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLWPEIT*ECFFAQ
Trigger: CTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCA...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATACACTATATGCATATTaGGCACCCCCAGTATTAGTC +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNTLYAY*APPVLV
Trigger: GACTAATACTGGGGGTGCTCAATATGCATATAGTGT...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCATGGAACGATATGTATaGCAAGAGCCTCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: ADCLCSSLAWLILYMPITMERYV*QEPLLM
Trigger: CATGAGAAGAGGCTCTTGTCATACATATCGTTCCAT...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCTCCATAATCAACCTTaGCATTGCCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFLHNQP*HCHCHS
Trigger: TGAATGACAATGGCAATGGCAAGGTTGATTATGGAG...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCCAGGAACAATACTTTaGATCTGTGAATGCCACAAT +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFPGTIL*ICECHN
Trigger: ATTGTGGCATTCACAGATGCAAAGTATTGTTCCTGG...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGACATTGAGGTGGGTCTaGTTTTCCCAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRTLRWV*FSQFTA
Trigger: AGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGCTGTTTCTTCTTCTCTaGAGCCACAATTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMLFLLL*SHNFCI
Trigger: GATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAG...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393284.7
CDS-3UTR GCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCCATCCATGTCCACCCTaGAGATTGTCTTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFHPCPP*RLSLLF
Trigger: GAAGAGCAAAGACAATCTGCAGGGTGGACATGGATG...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTTTTGTCTGTTGGTGCTaGCAAATTTTCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSFVCWC*QIFRYY
Trigger: ATAATACCTGAAAATTTGCCAGCACCAACAGACAAA...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTACAGCCCTAGATAAGTaGTCTATCATCACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLTALDK*SIITCS
Trigger: AGAGCAAGTGATGATAGACCACTTATCTAGGGCTGT...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CCA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTAGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQIVFALLLLGLFYICPLGGQEF*FVHDSE
Trigger: TTCTGAGTCATGGACAAACCAGAATTCTTGCCCACC...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTGGAAGGCTGAGATaGTCAGAACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: QIVFALLLLGLFYICPLPSGRLR*SELKNV
Trigger: GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGA...AGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACATCTTGAATTGCTTTaGAGACCAGCCTATCATTGG +
Preference number: 4 (lower is better)
Translates to: LQIVFALLLLGLFYICPLHLELL*RPAYHW
Trigger: CCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATG...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTTCTTTTAGCACATCTTaGATTGCTTTGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLSFSTS*IALKTS
Trigger: GCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGA...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATTCTTTTAGCACATCTTaGATTGCTTTGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDSFSTS*IALKTS
Trigger: GCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGA...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATTCAGACACTTCTAAGTaGAACACTTTTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNSDTSK*NTFRAC
Trigger: GCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGA...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTCAGACACTTCTAAGTaGAACACTTTTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFSDTSK*NTFRAC
Trigger: GCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTGGCCTTTCGAACATATaGTTTCCTGTATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFGLSNI*FPVFIH
Trigger: ATGAATGAATACAGGAAATCATATGTTCGAAAGGCC...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTTTCAAATTCACCATATaGCACTTCATCAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFFKFTI*HFIRLA
Trigger: AGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAA...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATGAAAAAGATGAATCTTaGTATTCCGGGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNEKDES*YSGLSE
Trigger: TTCAGACAGCCCGGAATATCAAGATTCATCTTTTTC...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp ATTTGTCTGTTGGTGCTGGCAAATTTTCAGGTATTATGTTCTGATCCTCATCATGTAAGGGATTGGTCATaGGTGAAAAAGAACCCAATG +
Preference number: 4 (lower is better)
Translates to: ICLLVLANFQVLCSDPHHVRDWS*VKKNPM
Trigger: CATTGGGTTCTTTTTCACTCATGACCAATCCCTTAC...ATGATGAGGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTTTGGCTTCTTCATCTTaGACACACTTTTCATCTATC +
Preference number: 4 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFLASSS*THFSSI
Trigger: GATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAA...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCA +
Preference number: 4 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDCIQFS*PLLFIA
Trigger: TGCGATAAACAACAGAGGGCAAGAAAATTGGATGCA...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCA +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNCIQFS*PLLFIA
Trigger: TGCGATAAACAACAGAGGGCAAGAAAATTGGATGCA...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATATGCTGACAACTTACTaGATCCAATTTTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNMLTTY*IQFSCP
Trigger: AGGGCAAGAAAATTGGATGCAGTAAGTTGTCAGCAT...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDWSIIT*SATICF
Trigger: GAAACAGATTGTTGCAGAGCAAGTGATGATAGACCA...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFWSIIT*SATICF
Trigger: GAAACAGATTGTTGCAGAGCAAGTGATGATAGACCA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGAATCAACCTTGCCATTaGCATTGTCATTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLNQPCH*HCHSEL
Trigger: TAATTCTGAATGACAATGGCAATGGCAAGGTTGATT...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCTCCATAATCAACCTTaGCATTGCCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFLHNQP*HCHCHS
Trigger: TGAATGACAATGGCAATGGCAAGGTTGATTATGGAG...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGCTCCATAATCAACCTTaGCATTGCCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMLHNQP*HCHCHS
Trigger: TGAATGACAATGGCAATGGCAAGGTTGATTATGGAG...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTACACTTCATCAGACTTaGTGCAGGCAACTTTTAATG +
Preference number: 4 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLTLHQT*CRQLLM
Trigger: CATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGT...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTACAGCCCTAGATAAGTaGTCTATCATCACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSTALDK*SIITCS
Trigger: AGAGCAAGTGATGATAGACCACTTATCTAGGGCTGT...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CCA 90 bp CAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTACAGCCCTAGATAAGTaGTCTATCATCACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QIVFALLLLGLFYICPLPTALDK*SIITCS
Trigger: AGAGCAAGTGATGATAGACCACTTATCTAGGGCTGT...AGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRGGQEF*FVHDSE
Trigger: TTCTGAGTCATGGACAAACCAGAATTCTTGCCCACC...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCGGQEF*FVHDSE
Trigger: TTCTGAGTCATGGACAAACCAGAATTCTTGCCCACC...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
3UTR CAA 72 bp GAATTTGTTGGGTTCACATGTATCACACTTCTCATGTaGCTGCCAAGTATAGATGGATACAGTGATATGTCT +
Preference number: 4 (lower is better)
Translates to: EFVGFTCITLLM*LPSIDGYSDMS
Trigger: AGACATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAACAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAAAGAGGTGTCATCTTTaGATCTGGAAGGATATGATC +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSKRCHL*IWKDMI
Trigger: GATCATATCCTTCCAGATTCAAAGATGACACCTCTT...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTTCTGGAAGGCTGAGATaGTCAGAACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCSGRLR*SELKNV
Trigger: GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGA...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGACATCTTGAATTGCTTTaGAGACCAGCCTATCATTGG +
Preference number: 4 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRHLELL*RPAYHW
Trigger: CCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATG...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTCCTTGTCCAACTGTTaGAAATATTTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFSLSNC*KYFPNP
Trigger: TGGATTGGGAAAATATTTTCAACAGTTGGACAAGGA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATTCCTTGTCCAACTGTTaGAAATATTTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNSLSNC*KYFPNP
Trigger: TGGATTGGGAAAATATTTTCAACAGTTGGACAAGGA...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTATCAGACACTTCTAAGTaGAACACTTTTAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LQIVFALLLLGLFYICPLSDTSK*NTFRAC
Trigger: GCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGA...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGATGGCCTGAAATTACTTaGGAATGCTTCTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRWPEIT*ECFFAQ
Trigger: CTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCA...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAAAATGTAAGGACATGTaGACAGGCATACACATGCAC +
Preference number: 4 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRKCKDM*TGIHMH
Trigger: GTGCATGTGTATGCCTGTTCACATGTCCTTACATTT...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGAAATGTAAGGACATGTaGACAGGCATACACATGCAC +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRKCKDM*TGIHMH
Trigger: GTGCATGTGTATGCCTGTTCACATGTCCTTACATTT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATTGTTGCCATATTGTTTaGTGCAGATGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNCCHIV*CRCNFP
Trigger: AGGAAAGTTACATCTGCATCAAACAATATGGCAACA...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR TCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTGTTGCCATATTGTTTaGTGCAGATGTAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFCCHIV*CRCNFP
Trigger: AGGAAAGTTACATCTGCATCAAACAATATGGCAACA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCATCAGGTATTATGTTCTaGTCCTCATCATCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSSGIMF*SSSSES
Trigger: TGACTCTGATGATGAGGATCAGAACATAATACCTGA...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAGTAAGGGATTGGTCATaGGTGAAAAAGAACCCAATG +
Preference number: 4 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRVRDWS*VKKNPM
Trigger: CATTGGGTTCTTTTTCACTCATGACCAATCCCTTAC...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCGTAAGGGATTGGTCATaGGTGAAAAAGAACCCAATG +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFVRDWS*VKKNPM
Trigger: CATTGGGTTCTTTTTCACTCATGACCAATCCCTTAC...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR TCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGACACTATATGCATATTaGGCACCCCCAGTATTAGTC +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRTLYAY*APPVLV
Trigger: GACTAATACTGGGGGTGCTCAATATGCATATAGTGT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCCCTTGCTGGTCAACCTaGAATTACTTGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFPCWST*NYLRML
Trigger: AAGCATTCTCAAGTAATTTCAGGTTGACCAGCAAGG...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTAAGAGCCTCTTCTCATaGTCAGAAACGAATACATCC +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSKSLFS*SETNTS
Trigger: GGATGTATTCGTTTCTGATCATGAGAAGAGGCTCTT...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGTTGGCTTCTTCATCTTaGACACACTTTTCATCTATC +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMLASSS*THFSSI
Trigger: GATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAA...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp CCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTCTGTTTCTTCTTCTCTaGAGCCACAATTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: PLSFRISHADSKSFSDTSLFLLL*SHNFQI
Trigger: TATTTGGAAATTGTGGCTGCAGAGAAGAAGAAACAG...AGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACTCCATAATCAACCTTaGCATTGCCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LQIVFALLLLGLFYICPLLHNQP*HCHCHS
Trigger: TGAATGACAATGGCAATGGCAAGGTTGATTATGGAG...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGCTTCATCAGACTTGCTaGAGGCAACTTTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMLHQTC*RQLLMF
Trigger: AAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAG...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAACACTTCATCAGACTTaGTGCAGGCAACTTTTAATG +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSTLHQT*CRQLLM
Trigger: CATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGT...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTATGAAAAACACTATATaGATATTGAGCACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLMKNTI*ILSTPS
Trigger: ACTGGGGGTGCTCAATATGCATATAGTGTTTTTCAT...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGAAAAACACTATATaGATATTGAGCACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDMKNTI*ILSTPS
Trigger: ACTGGGGGTGCTCAATATGCATATAGTGTTTTTCAT...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTACAGCCCTAGATAAGTaGTCTATCATCACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCTALDK*SIITCS
Trigger: AGAGCAAGTGATGATAGACCACTTATCTAGGGCTGT...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCACAGCCCTAGATAAGTaGTCTATCATCACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFTALDK*SIITCS
Trigger: AGAGCAAGTGATGATAGACCACTTATCTAGGGCTGT...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTAAGAGGTGTCATCTTTaGATCTGGAAGGATATGATC +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCKRCHL*IWKDMI
Trigger: GATCATATCCTTCCAGATTCAAAGATGACACCTCTT...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAAAGAGGTGTCATCTTTaGATCTGGAAGGATATGATC +
Preference number: 4 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRKRCHL*IWKDMI
Trigger: GATCATATCCTTCCAGATTCAAAGATGACACCTCTT...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTAAGAGGTGTCATCTTTaGATCTGGAAGGATATGATC +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSKRCHL*IWKDMI
Trigger: GATCATATCCTTCCAGATTCAAAGATGACACCTCTT...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTTCTTTTAGCACATCTTaGATTGCTTTGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSSFSTS*IALKTS
Trigger: GCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGA...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCCTTGTCCAACTGTTaGAAATATTTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: QIVFALLLLGLFYICPLPSLSNC*KYFPNP
Trigger: TGGATTGGGAAAATATTTTCAACAGTTGGACAAGGA...AGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTCAACCTGAAATTACTTaGGAATGCTTCTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSQPEIT*ECFFAQ
Trigger: CTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGTTG...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCATTGGCTTCTTCATCTTaGACACACTTTTCATCTATC +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSLASSS*THFSSI
Trigger: GATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAA...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCA +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCCIQFS*PLLFIA
Trigger: TGCGATAAACAACAGAGGGCAAGAAAATTGGATGCA...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCA +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFCIQFS*PLLFIA
Trigger: TGCGATAAACAACAGAGGGCAAGAAAATTGGATGCA...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCA +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSCIQFS*PLLFIA
Trigger: TGCGATAAACAACAGAGGGCAAGAAAATTGGATGCA...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTATGCTGACAACTTACTaGATCCAATTTTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCMLTTY*IQFSCP
Trigger: AGGGCAAGAAAATTGGATGCAGTAAGTTGTCAGCAT...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp ATTTGTCTGTTGGTGCTGGCAAATTTTCAGGTATTATGTTCTGATCCTCATCATCTGTTTCTTCTTCTCTaGAGCCACAATTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: ICLLVLANFQVLCSDPHHLFLLL*SHNFQI
Trigger: TATTTGGAAATTGTGGCTGCAGAGAAGAAGAAACAG...ATGATGAGGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRWSIIT*SATICF
Trigger: GAAACAGATTGTTGCAGAGCAAGTGATGATAGACCA...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFWSIIT*SATICF
Trigger: GAAACAGATTGTTGCAGAGCAAGTGATGATAGACCA...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSWSIIT*SATICF
Trigger: GAAACAGATTGTTGCAGAGCAAGTGATGATAGACCA...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATCAAAAATGTCAAGGTTaGACCTTTGTTTCATGTAGT +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNQKCQG*TFVSCS
Trigger: ACTACATGAAACAAAGGTGCAACCTTGACATTTTTG...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336815.10
CDS-3UTR GCA 90 bp TGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAAGTCTTCATCAGACTTGCTaGAGGCAACTTTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: CHSELAMQTQNPFQTLLSLHQTC*RQLLMF
Trigger: AAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAG...ACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGACACTTCATCAGACTTaGTGCAGGCAACTTTTAATG +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRTLHQT*CRQLLM
Trigger: CATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATTCACATCTTGAAAAGTaGAACTTTGAATTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNSHLEK*NFEFVG
Trigger: CCCAACAAATTCAAAGTTGCACTTTTCAAGATGTGA...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR GCA 90 bp CAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTATCATGCAGTATACTaGAGTGTAGCAGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: QIVFALLLLGLFYICPLPYHAVY*SVAEGI
Trigger: AATTCCTTCTGCTACACTGCAGTATACTGCATGATA...AGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR CCA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTTTGTCTGTTGGTGCTaGCAAATTTTCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFFVCWC*QIFRYY
Trigger: ATAATACCTGAAAATTTGCCAGCACCAACAGACAAA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CCA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTAATGATACTGAGTATATaGAGTTTGACATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LQIVFALLLLGLFYICPLMILSI*SLTWCD
Trigger: GTCACACCATGTCAAACTCCATATACTCAGTATCAT...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR TCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTTCCTTGTCCAACTGTTaGAAATATTTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCSLSNC*KYFPNP
Trigger: TGGATTGGGAAAATATTTTCAACAGTTGGACAAGGA...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR TCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGGGCCTTTCGAACATATaGTTTCCTGTATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRGLSNI*FPVFIH
Trigger: ATGAATGAATACAGGAAATCATATGTTCGAAAGGCC...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR TCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCGGCCTTTCGAACATATaGTTTCCTGTATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFGLSNI*FPVFIH
Trigger: ATGAATGAATACAGGAAATCATATGTTCGAAAGGCC...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR TCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGTTCAAATTCACCATATaGCACTTCATCAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRFKFTI*HFIRLA
Trigger: AGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAA...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAAATCAACCTTGCCATTaGCATTGTCATTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSNQPCH*HCHSEL
Trigger: TAATTCTGAATGACAATGGCAATGGCAAGGTTGATT...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTCTTCATCAGACTTGCTaGAGGCAACTTTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: NLASENSTRGLHIFSLSCLHQTC*RQLLMF
Trigger: AAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAG...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CCA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCATTTGTCTGTTGGTGCTaGCAAATTTTCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSFVCWC*QIFRYY
Trigger: ATAATACCTGAAAATTTGCCAGCACCAACAGACAAA...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CCA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAATGATACTGAGTATATaGAGTTTGACATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRMILSI*SLTWCD
Trigger: GTCACACCATGTCAAACTCCATATACTCAGTATCAT...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393284.7
CDS-3UTR CCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCTGCTCTTCTCTTGCTTaGCTTATTTTATATATGCCC +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFCSSLA*LILYMP
Trigger: GGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCA...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
3UTR CAA 72 bp TTTCCCAAATTGTCGATATTCATAAATTGTAAGGGATaGGTCATGAGTGAAAAAGAACCCAATGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FPKLSIFINCKG*VMSEKEPNELS
Trigger: AGAGAGCTCATTGGGTTCTTTTTCACTCATGACCAATCCCTTACAATTTATGAATATCGACAATTTGGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328705.7
3UTR CAA 72 bp CATTTTCTTATGTTTATAATAGGCACACTGCCACTTTaGTTGAAATCCAGTTTCATAAAGGCCTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: HFLMFIIGTLPL*LKSSFIKAFRT
Trigger: TGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR GCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGAATCAACCTTGCCATTaGCATTGTCATTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRNQPCH*HCHSEL
Trigger: TAATTCTGAATGACAATGGCAATGGCAAGGTTGATT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR GCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCAATCAACCTTGCCATTaGCATTGTCATTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFNQPCH*HCHSEL
Trigger: TAATTCTGAATGACAATGGCAATGGCAAGGTTGATT...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR GCA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGTCACATCTTGAAAAGTaGAACTTTGAATTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PILIYQIDHGGKYILRKRSHLEK*NFEFVG
Trigger: CCCAACAAATTCAAAGTTGCACTTTTCAAGATGTGA...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR GCA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCTTCCTGTGTTTATCATaGAGTATACTAACTGGGATT +
Preference number: 4 (lower is better)
Translates to: LCSSLAWLILYMPITFYFFLCLS*SILTGI
Trigger: AATCCCAGTTAGTATACTGCATGATAAACACAGGAA...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409799.5
CDS-3UTR CCA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTTTTGTCTGTTGGTGCTaGCAAATTTTCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: IVFALLLLGLFYICPLPSFVCWC*QIFRYY
Trigger: ATAATACCTGAAAATTTGCCAGCACCAACAGACAAA...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS CCA 90 bp AGGCCATCGATGCAGGCTGGGGGAGAGAAGGCAGGATGGCAGGAGTaGGGGCCATGGTCATTTGAGCCACTTCCTCATGTAACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: RPSMQAGGEKAGWQE*GPWSFEPLPHVTCA
Trigger: GGCACAAGTTACATGAGGAAGTGGCTCAAATGACCATGGCCCCCACTCCTGCCATCCTGCCTTCTCTCCCCCAGCCTGCATCGATGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 90 bp CTTCTCATGAGGCCATCGATGCAGGCTGGGGGAGAGAAGGCAGGATaGCAGGAGTGGGGGCCATGGTCATTTGAGCCACTTCCTCATGTA +
Preference number: 5 (lower is better)
Translates to: LLMRPSMQAGGEKAG*QEWGPWSFEPLPHV
Trigger: TACATGAGGAAGTGGCTCAAATGACCATGGCCCCCACTCCTGCCATCCTGCCTTCTCTCCCCCAGCCTGCATCGATGGCCTCATGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS TCA 90 bp GGATTCCTGGACAGGACAGGCGAGGGGCACAAGAGACAGTCAGCCTaGTTTCACCTAACAAGCTCGGTAAGAAGAGGTCCAGAGTTAGAA +
Preference number: 5 (lower is better)
Translates to: GFLDRTGEGHKRQSA*FHLTSSVRRGPELE
Trigger: TTCTAACTCTGGACCTCTTCTTACCGAGCTTGTTAGGTGAAATCAGGCTGACTGTCTCTTGTGCCCCTCGCCTGTCCTGTCCAGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409445.7
ENST00000409799.5
ENST00000493070.1
CDS TCA 90 bp GCTTTTCCTGGTGCATGGTGCAAGTTGTCATTTGATCTACCATTCTaGGGTCTGGAGAATGGTGGCCCTGTTCTCACAGCTCCACTAGGC +
Preference number: 5 (lower is better)
Translates to: AFPGAWCKLSFDLPF*GLENGGPVLTAPLG
Trigger: GCCTAGTGGAGCTGTGAGAACAGGGCCACCATTCTCCAGACCTCAGAATGGTAGATCAAATGACAACTTGCACCATGCACCAGGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548958.2
CDS GCA 90 bp ATGTTGCCCACCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTaGTCTCCTTTGGCAATACTCTCACAGACACACCCAGGAACAATA +
Preference number: 5 (lower is better)
Translates to: MLPTHIEVGLLFPVH*SPLAILSQTHPGTI
Trigger: TATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000486196.1
CDS GCA 90 bp CTCCTTCCAAGCAAAGTGTACAGCCAGGTGCATTGCTCAAAGTTCTaGATACTGGGGAGATTTCCCTTCACCAGCATCCTTCAGGGATAC +
Preference number: 5 (lower is better)
Translates to: LLPSKVYSQVHCSKF*ILGRFPFTSILQGY
Trigger: GTATCCCTGAAGGATGCTGGTGAAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACACTTTGCTTGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 90 bp CCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTGCTCTCCTTTaGCAATACTCTCACAGACACACCCAGGAACAATACTTTGCATCG +
Preference number: 5 (lower is better)
Translates to: PTLRWVCFSQFTALL*QYSHRHTQEQYFAS
Trigger: CGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486196.1
CDS CCA 90 bp CCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTGCTCTCCTTTaGCAATACTCTCACAGACACACCCAGGAACAATACTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: PTLRWVCFSQFTALL*QYSHRHTQEQYFAS
Trigger: AGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS GCA 90 bp CATACATCTGGCCATTTCTCCTTCCAAGCAAAGTGTACAGCCAGGTaGATTGCTCAAAGTTCTGCATACTGGGGAGATTTCCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: HTSGHFSFQAKCTAR*IAQSSAYWGDFPSP
Trigger: TGGTGAAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACACTTTGCTTGGAAGGAGAAATGGCCAGATGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 90 bp CAAGCAAAGTGTACAGCCAGGTGCATTGCTCAAAGTTCTGCATACTaGGGAGATTTCCCTTCACCAGCATCCTTCAGGGATACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: QAKCTARCIAQSSAY*GDFPSPASFRDTKK
Trigger: TTTCTTGGTATCCCTGAAGGATGCTGGTGAAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACACTTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS-3UTR CAA 90 bp GCCTCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTCTGAGTATATGGAGTTaGACATGGTGTGACCCAGCC +
Preference number: 5 (lower is better)
Translates to: ASSHDQKRIHPCPPCRLSLSIWS*TWCDPA
Trigger: GGCTGGGTCACACCATGTCAAACTCCATATACTCAG...AGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409445.7
CDS-3UTR CAA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTTGTTGCCCACCCACATaGAGGTGGGTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFCCPPT*RWVCFS
Trigger: GGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACA...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CAA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTCCCTGCAGATTGTCTTaGCTCTTCTCTTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSPCRLS*LFSCLA
Trigger: AGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGG...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTGTCCACCCTGCAGATaGTCTTTGCTCTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLCPPCR*SLLFSC
Trigger: GCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACA...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS GCA 90 bp CATCTGTGTTGGCTTCTTCATCTTGCACACACTGGTTTAATGTCCTaGACATTCATCCTTGTAGAGTCATTCTCGGTCTTCCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: HLCWLLHLAHTGLMS*TFILVESFSVFPFS
Trigger: AGAGAAAGGGAAGACCGAGAATGACTCTACAAGGATGAATGTGCAGGACATTAAACCAGTGTGTGCAAGATGAAGAAGCCAACACAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS GCA 90 bp TTCCTATCCAGAGTCGTAAGGTCATCTGTGTTGGCTTCTTCATCTTaGACACACTGGTTTAATGTCCTGCACATTCATCCTTGTAGAGTC +
Preference number: 5 (lower is better)
Translates to: FLSRVVRSSVLASSS*THWFNVLHIHPCRV
Trigger: GACTCTACAAGGATGAATGTGCAGGACATTAAACCAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS GCA 90 bp TGGTCATTTGAGCCACTTCCTCATGTAACTTGTGCCTTCAGGATCTaGTTGCGCCCCATCATGTATATACCACTTCCATTTGATGATGAA +
Preference number: 5 (lower is better)
Translates to: WSFEPLPHVTCAFRI*LRPIMYIPLPFDDE
Trigger: TTCATCATCAAATGGAAGTGGTATATACATGATGGGGCGCAAGCAGATCCTGAAGGCACAAGTTACATGAGGAAGTGGCTCAAATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 90 bp AGAGTCGTAAGGTCATCTGTGTTGGCTTCTTCATCTTGCACACACTaGTTTAATGTCCTGCACATTCATCCTTGTAGAGTCATTCTCGGT +
Preference number: 5 (lower is better)
Translates to: RVVRSSVLASSSCTH*FNVLHIHPCRVILG
Trigger: ACCGAGAATGACTCTACAAGGATGAATGTGCAGGACATTAAACCAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS-3UTR CAA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACA +
Preference number: 5 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSVRSSV*ASSSCT
Trigger: TGTGCAAGATGAAGAAGCCAACACAGATGACCTTAC...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGGGCAAGAATTCTGGTTaGTCCATGACTCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLGKNSG*SMTQKS
Trigger: GGACTTCTGAGTCATGGACAAACCAGAATTCTTGCC...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS GCA 90 bp TCTGGATCACTGATGACAGCCCTAGATAAGTGGTCTATCATCACTTaGTCTGCAACAATCTGTTTCTTCTTCTCTGCAGCCACAATTTCT +
Preference number: 5 (lower is better)
Translates to: SGSLMTALDKWSIIT*SATICFFFSAATIS
Trigger: AGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393284.7
ENST00000409445.7
ENST00000409799.5
ENST00000551829.5
ENST00000552497.5
CDS-3UTR CAA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTGTCCACCCTGCAGATaGTCTTTGCTCTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ADCLCSSLAWLILYMPITCPPCR*SLLFSC
Trigger: GCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACA...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS TCA 90 bp GGCAATACTCTCACAGACACACCCAGGAACAATACTTTGCATCTGTaGATGCCACAATTAGTGAAAAAGATGAATCTTGATATTCCGGGC +
Preference number: 5 (lower is better)
Translates to: GNTLTDTPRNNTLHL*MPQLVKKMNLDIPG
Trigger: GCCCGGAATATCAAGATTCATCTTTTTCACTAATTGTGGCATTCACAGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS TCA 90 bp TGCTGGCAAATTTTCAGGTATTATGTTCTGATCATGATCTATAGGTaGAGTCCCATCTGTAAGTTGAGAAGCAAGGAAGCCAGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: CWQIFRYYVLIMIYR*SPICKLRSKEASSS
Trigger: GCTACTGCTGGCTTCCTTGCTTCTCAACTTACAGATGGGACTTCACCTATAGATCATGATCAGAACATAATACCTGAAAATTTGCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486196.1
CDS-3UTR CAA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGGTGGTCTATCATCACTaGCTCTGCAACAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLVVYHH*LCNNLF
Trigger: AAACAGATTGTTGCAGAGCAAGTGATGATAGACCAC...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGACCTTGCCATTGCCATaGTCATTCAGAATTAGCCAT +
Preference number: 5 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLTLPLP*SFRISH
Trigger: ATGGCTAATTCTGAATGACAATGGCAATGGCAAGGT...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TTCTTGCCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATAACCTTGCTGTAAGAGACACTTCATCAGACTaGCTGCAGGCAACTTTTAAT +
Preference number: 5 (lower is better)
Translates to: FLPSVVYRKSCLHNLAVRDTSSD*LQATFN
Trigger: ATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTC...TCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CAA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCGGCAAGAATTCTGGTTaGTCCATGACTCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: ADCLCSSLAWLILYMPITGKNSG*SMTQKS
Trigger: GGACTTCTGAGTCATGGACAAACCAGAATTCTTGCC...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGATCACCAAGTCGGTATaGTTTTCCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLITKSV*FSFSSS
Trigger: GGACGAAGAAAAGGAAAACAATACCGACTTGGTGAT...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCACTGAGTATATGGAGTTaGACATGGTGTGACCCAGCC +
Preference number: 5 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSLSIWS*TWCDPA
Trigger: GGCTGGGTCACACCATGTCAAACTCCATATACTCAG...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393284.7
CDS-3UTR CAA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACA +
Preference number: 5 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMVRSSV*ASSSCT
Trigger: TGTGCAAGATGAAGAAGCCAACACAGATGACCTTAC...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACA +
Preference number: 5 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFVRSSV*ASSSCT
Trigger: TGTGCAAGATGAAGAAGCCAACACAGATGACCTTAC...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGGAAGAGGTGTCATCTTaGAATCTGGAAGGATATGAT +
Preference number: 5 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLEEVSS*NLEGYD
Trigger: ATCATATCCTTCCAGATTCAAAGATGACACCTCTTC...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTTCCTTGTCCAACTGTaGAAAATATTTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLFLVQL*KIFSQS
Trigger: GGATTGGGAAAATATTTTCAACAGTTGGACAAGGAA...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAGGCAAGAATTCTGGTTaGTCCATGACTCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSGKNSG*SMTQKS
Trigger: GGACTTCTGAGTCATGGACAAACCAGAATTCTTGCC...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTAAAAGAATGGCTGAATTaGGCTCCTAGAAGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQIVFALLLLGLFYICPLKEWLN*APRSGS
Trigger: GCTGCCACTTCTAGGAGCCAAATTCAGCCATTCTTT...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTTTTCATGTTTGTCCTaGCTGGTCAACCTGAAATTA +
Preference number: 5 (lower is better)
Translates to: SHDQKRIHPCPPCRLSLLFSCLS*LVNLKL
Trigger: TAATTTCAGGTTGACCAGCAAGGACAAACATGAAAA...GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp CTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGCTCTTTTTCATGTTTGTCCTaGCTGGTCAACCTGAAATTA +
Preference number: 5 (lower is better)
Translates to: LMIRNEYIHVHPADCLCSFSCLS*LVNLKL
Trigger: TAATTTCAGGTTGACCAGCAAGGACAAACATGAAAA...AGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCCCCTGCAGATTGTCTTaGCTCTTCTCTTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LCSSLAWLILYMPITFYFPCRLS*LFSCLA
Trigger: AGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGG...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCGTGGTCTATCATCACTaGCTCTGCAACAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: ADCLCSSLAWLILYMPITVVYHH*LCNNLF
Trigger: AAACAGATTGTTGCAGAGCAAGTGATGATAGACCAC...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTACCTTGCCATTGCCATaGTCATTCAGAATTAGCCAT +
Preference number: 5 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFTLPLP*SFRISH
Trigger: ATGGCTAATTCTGAATGACAATGGCAATGGCAAGGT...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCACCTTGCCATTGCCATaGTCATTCAGAATTAGCCAT +
Preference number: 5 (lower is better)
Translates to: ADCLCSSLAWLILYMPITTLPLP*SFRISH
Trigger: ATGGCTAATTCTGAATGACAATGGCAATGGCAAGGT...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp CCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTGGCACACTGCCACTTTaGTTGAAATCCAGTTTCATA +
Preference number: 5 (lower is better)
Translates to: PLSFRISHADSKSFSDTSGTLPL*LKSSFI
Trigger: TATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCC...AGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CAA 90 bp TGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTGACACTTCATCAGACTaGCTGCAGGCAACTTTTAAT +
Preference number: 5 (lower is better)
Translates to: CHCHSELAMQTQNPFQTLDTSSD*LQATFN
Trigger: ATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTC...AAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTGGCAAGAATTCTGGTTaGTCCATGACTCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCGKNSG*SMTQKS
Trigger: GGACTTCTGAGTCATGGACAAACCAGAATTCTTGCC...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGATCACCAAGTCGGTATaGTTTTCCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMITKSV*FSFSSS
Trigger: GGACGAAGAAAAGGAAAACAATACCGACTTGGTGAT...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp CCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTATCACACTTCTCATGTaGCTGCCAAGTATAGATGGA +
Preference number: 5 (lower is better)
Translates to: PLSFRISHADSKSFSDTSITLLM*LPSIDG
Trigger: TCCATCTATACTTGGCAGCAACATGAGAAGTGTGAT...AGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CAA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGATCACACTTCTCATGTaGCTGCCAAGTATAGATGGA +
Preference number: 5 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMITLLM*LPSIDG
Trigger: TCCATCTATACTTGGCAGCAACATGAGAAGTGTGAT...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp TTCTTGCCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATAACCTTGCTGTAAGAGTACCTTCTCACATCTaGAAAAGTGCAACTTTGAAT +
Preference number: 5 (lower is better)
Translates to: FLPSVVYRKSCLHNLAVRVPSHI*KSATLN
Trigger: ATTCAAAGTTGCACTTTTCAAGATGTGAGAAGGTAC...TCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CAA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCAAAGAATGGCTGAATTaGGCTCCTAGAAGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LCSSLAWLILYMPITFYFKEWLN*APRSGS
Trigger: GCTGCCACTTCTAGGAGCCAAATTCAGCCATTCTTT...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp TCTTCTCATGATCAGAAACGAATACATCCATGTCCACCCTGCAGATTGTCTTTGTTGCTCTTCTCTTGCTaGGCTTATTTTATATATGCC +
Preference number: 5 (lower is better)
Translates to: SSHDQKRIHPCPPCRLSLLLFSC*AYFIYA
Trigger: GGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAA...CAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACA +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCVRSSV*ASSSCT
Trigger: TGTGCAAGATGAAGAAGCCAACACAGATGACCTTAC...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACA +
Preference number: 5 (lower is better)
Translates to: IVFALLLLGLFYICPLPSVRSSV*ASSSCT
Trigger: TGTGCAAGATGAAGAAGCCAACACAGATGACCTTAC...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAGTGGTCTATCATCACTaGCTCTGCAACAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSVVYHH*LCNNLF
Trigger: AAACAGATTGTTGCAGAGCAAGTGATGATAGACCAC...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp TTCACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATGAAGAGGTGTCATCTTaGAATCTGGAAGGATATGAT +
Preference number: 5 (lower is better)
Translates to: FTCITLLMLLPSIDGYSDEEVSS*NLEGYD
Trigger: ATCATATCCTTCCAGATTCAAAGATGACACCTCTTC...ATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp GCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCGAAGAGGTGTCATCTTaGAATCTGGAAGGATATGAT +
Preference number: 5 (lower is better)
Translates to: ADCLCSSLAWLILYMPITEEVSS*NLEGYD
Trigger: ATCATATCCTTCCAGATTCAAAGATGACACCTCTTC...GGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp ACCACGTTTGAATTCTCCATAATCAACCTTGCCATTGCCATTGTCATTCAGAATGTCAAGGTTGCACCTTaGTTTCATGTAGTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: TTFEFSIINLAIAIVIQNVKVAP*FHVVFF
Trigger: AAAGAACACTACATGAAACAAAGGTGCAACCTTGAC...ATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336815.10
CDS-3UTR CAA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTTTCCTTGTCCAACTGTaGAAAATATTTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFFLVQL*KIFSQS
Trigger: GGATTGGGAAAATATTTTCAACAGTTGGACAAGGAA...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CAA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTAGGCACACTGCCACTTTaGTTGAAATCCAGTTTCATA +
Preference number: 5 (lower is better)
Translates to: LQIVFALLLLGLFYICPLGTLPL*LKSSFI
Trigger: TATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCC...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAGACACTTCATCAGACTaGCTGCAGGCAACTTTTAAT +
Preference number: 5 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSDTSSD*LQATFN
Trigger: ATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTC...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp CCTTGCCATTGCCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTATTATCTCACTGGCTTaGGGCCCAATTCTAATTTAT +
Preference number: 5 (lower is better)
Translates to: PCHCHCHSELAMQTQNPFIISLA*GPILIY
Trigger: ATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAAT...AAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000336815.10
CDS-3UTR CAA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGGTGGTCTATCATCACTaGCTCTGCAACAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: PILIYQIDHGGKYILRKRVVYHH*LCNNLF
Trigger: AAACAGATTGTTGCAGAGCAAGTGATGATAGACCAC...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp ACATGCACAAACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTTTCCTTGTCCAACTGTaGAAAATATTTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: TCTNTNTPLHLSFWIVLFFLVQL*KIFSQS
Trigger: GGATTGGGAAAATATTTTCAACAGTTGGACAAGGAA...AAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGACCTTGCCATTGCCATaGTCATTCAGAATTAGCCAT +
Preference number: 5 (lower is better)
Translates to: PILIYQIDHGGKYILRKRTLPLP*SFRISH
Trigger: ATGGCTAATTCTGAATGACAATGGCAATGGCAAGGT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTACCTTGCCATTGCCATaGTCATTCAGAATTAGCCAT +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCTLPLP*SFRISH
Trigger: ATGGCTAATTCTGAATGACAATGGCAATGGCAAGGT...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAGGCACACTGCCACTTTaGTTGAAATCCAGTTTCATA +
Preference number: 5 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRGTLPL*LKSSFI
Trigger: TATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCC...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTGGCACACTGCCACTTTaGTTGAAATCCAGTTTCATA +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCGTLPL*LKSSFI
Trigger: TATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCC...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCGGCACACTGCCACTTTaGTTGAAATCCAGTTTCATA +
Preference number: 5 (lower is better)
Translates to: LCSSLAWLILYMPITFYFGTLPL*LKSSFI
Trigger: TATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCC...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp ACATGTATCACACTTCTCATGTTGCTGCCAAGTATAGATGGATACAGTGATATGATTATCTCACTGGCTTaGGGCCCAATTCTAATTTAT +
Preference number: 5 (lower is better)
Translates to: TCITLLMLLPSIDGYSDMIISLA*GPILIY
Trigger: ATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAAT...CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGATCACCAAGTCGGTATaGTTTTCCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: PILIYQIDHGGKYILRKRITKSV*FSFSSS
Trigger: GGACGAAGAAAAGGAAAACAATACCGACTTGGTGAT...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp CCATTGTCATTCAGAATTAGCCATGCAGACTCAAAATCCTTTTCAGACACTTCTAGTGCAACTTTGAATTaGTTGGGTTCACATGTATCA +
Preference number: 5 (lower is better)
Translates to: PLSFRISHADSKSFSDTSSATLN*LGSHVS
Trigger: TGATACATGTGAACCCAACAAATTCAAAGTTGCACT...AGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS-3UTR CAA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCAAACACTATATGCATATaGAGCACCCCCAGTATTAGT +
Preference number: 5 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSNTICI*STPSIS
Trigger: ACTAATACTGGGGGTGCTCAATATGCATATAGTGTT...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAGAAGAGGTGTCATCTTaGAATCTGGAAGGATATGAT +
Preference number: 5 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFREEVSS*NLEGYD
Trigger: ATCATATCCTTCCAGATTCAAAGATGACACCTCTTC...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp AACACTAACACACCCCTACATCTATCTTTCTGGATAGTTCTCTTTCCAAATTCATCCATAGAAGCAGTTTaGAGAGAATCCAAAGCTATT +
Preference number: 5 (lower is better)
Translates to: NTNTPLHLSFWIVLFPNSSIEAV*RESKAI
Trigger: AATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGA...TGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp CTGCAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTATCCATAGAAGCAGTTTaGAGAGAATCCAAAGCTATT +
Preference number: 5 (lower is better)
Translates to: LQIVFALLLLGLFYICPLSIEAV*RESKAI
Trigger: AATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGA...TAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTAACACTATATGCATATaGAGCACCCCCAGTATTAGT +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCNTICI*STPSIS
Trigger: ACTAATACTGGGGGTGCTCAATATGCATATAGTGTT...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp CAGATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTTGCTCTTCTCTTGCTaGGCTTATTTTATATATGCC +
Preference number: 5 (lower is better)
Translates to: QIVFALLLLGLFYICPLPLLFSC*AYFIYA
Trigger: GGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAA...AGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS CCA 90 bp TTGTTTTTAATTCTACAGGAATCAGCAAATTATTTATGGTTAGAATaGATTAAAAGGTGCCACATAACAGCTCAGAAGGCAAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LFLILQESANYLWLE*IKRCHITAQKAKSL
Trigger: CAGGGACTTTGCCTTCTGAGCTGTTATGTGGCACCTTTTAATCCATTCTAACCATAAATAATTTGCTGATTCCTGTAGAATTAAAAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547320.1
CDS-3UTR CAA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGTCCATAGAAGCAGTTTaGAGAGAATCCAAAGCTATT +
Preference number: 5 (lower is better)
Translates to: PILIYQIDHGGKYILRKRSIEAV*RESKAI
Trigger: AATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGA...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp ATTGTCTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTTCCATAGAAGCAGTTTaGAGAGAATCCAAAGCTATT +
Preference number: 5 (lower is better)
Translates to: IVFALLLLGLFYICPLPSSIEAV*RESKAI
Trigger: AATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGA...AGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp CCAATTCTAATTTATCAAATTGACCATGGTGGCAAATATATTCTGAGGAAGAGGTTCCTTGTCCAACTGTaGAAAATATTTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: PILIYQIDHGGKYILRKRFLVQL*KIFSQS
Trigger: GGATTGGGAAAATATTTTCAACAGTTGGACAAGGAA...CCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp CTTTGCTCTTCTCTTGCTTGGCTTATTTTATATATGCCCATTACCTTCTATTTCTTCCTTGTCCAACTGTaGAAAATATTTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: LCSSLAWLILYMPITFYFFLVQL*KIFSQS
Trigger: GGATTGGGAAAATATTTTCAACAGTTGGACAAGGAA...GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409445.7
ENST00000409799.5
CDS-3UTR CAA 90 bp AGTTGTCTCTTTTCTCTGTATTCCCAGGAAGAAATGACTAGCAAAGAATTTAGAATTATCTCACTGGCTTaGGGCCCAATTCTAATTTAT +
Preference number: 5 (lower is better)
Translates to: SCLFSLYSQEEMTSKEFRIISLA*GPILIY
Trigger: ATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAAT...TCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328705.7
ENST00000336815.10
ENST00000393284.7
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTAGTGCAACTTTGAATTaGTTGGGTTCACATGTATCA +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCSATLN*LGSHVS
Trigger: TGATACATGTGAACCCAACAAATTCAAAGTTGCACT...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS-3UTR CAA 90 bp AATTTAGCCAGTGAAAATAGCACTAGAGGTTTACACATATTTTCCCTCTCATGTGTACCTTCTCACATCTaGAAAAGTGCAACTTTGAAT +
Preference number: 5 (lower is better)
Translates to: NLASENSTRGLHIFSLSCVPSHI*KSATLN
Trigger: ATTCAAAGTTGCACTTTTCAAGATGTGAGAAGGTAC...ACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000393284.7
CDS TCA 72 bp GACAGGACAGGCGAGGGGCACAAGAGACAGTCAGCCTaGTTTCACCTAACAAGCTCGGTAAGAAGAGGTCCA +
Preference number: 6 (lower is better)
Translates to: DRTGEGHKRQSA*FHLTSSVRRGP
Trigger: TGGACCTCTTCTTACCGAGCTTGTTAGGTGAAATCAGGCTGACTGTCTCTTGTGCCCCTCGCCTGTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409445.7
ENST00000409799.5
ENST00000493070.1
CDS TCA 72 bp GAAGGCAGGATGGCAGGAGTGGGGGCCATGGTCATTTaGGCCACTTCCTCATGTAACTTGTGCCTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: EGRMAGVGAMVI*ATSSCNLCLQD
Trigger: ATCCTGAAGGCACAAGTTACATGAGGAAGTGGCTCAAATGACCATGGCCCCCACTCCTGCCATCCTGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 72 bp CCTGTGTTTATCATGCAGTATACTAACTGGGATTCCTaGACAGGACAGGCGAGGGGCACAAGAGACAGTCAG +
Preference number: 6 (lower is better)
Translates to: PVFIMQYTNWDS*TGQARGTRDSQ
Trigger: CTGACTGTCTCTTGTGCCCCTCGCCTGTCCTGTCCAGGAATCCCAGTTAGTATACTGCATGATAAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409799.5
ENST00000493070.1
CDS TCA 72 bp GGTGCATGGTGCAAGTTGTCATTTGATCTACCATTCTaGGGTCTGGAGAATGGTGGCCCTGTTCTCACAGCT +
Preference number: 6 (lower is better)
Translates to: GAWCKLSFDLPF*GLENGGPVLTA
Trigger: AGCTGTGAGAACAGGGCCACCATTCTCCAGACCTCAGAATGGTAGATCAAATGACAACTTGCACCATGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548958.2
CDS CCA 72 bp AGGTGGGTCTGCTTTTCCCAGTTCACTGCTCTCCTTTaGCAATACTCTCACAGACACACCCAGGAACAATAC +
Preference number: 6 (lower is better)
Translates to: RWVCFSQFTALL*QYSHRHTQEQY
Trigger: GTATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000486196.1
CDS CCA 72 bp TGTACAGCCAGGTGCATTGCTCAAAGTTCTGCATACTaGGGAGATTTCCCTTCACCAGCATCCTTCAGGGAT +
Preference number: 6 (lower is better)
Translates to: CTARCIAQSSAY*GDFPSPASFRD
Trigger: ATCCCTGAAGGATGCTGGTGAAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CAA 90 bp ACCCACATTGAGGTGGGTCTGCTTTTCCCAGTTCACTGCTCTCCTTaGGCAATACTCTCACAGACACACCCAGGAACAATACTTTGCATC +
Preference number: 6 (lower is better)
Translates to: THIEVGLLFPVHCSP*AILSQTHPGTILCI
Trigger: GATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328705.7
ENST00000486196.1
CDS GCA 72 bp AGCAAAGTGTACAGCCAGGTGCATTGCTCAAAGTTCTaGATACTGGGGAGATTTCCCTTCACCAGCATCCTT +
Preference number: 6 (lower is better)
Translates to: SKVYSQVHCSKF*ILGRFPFTSIL
Trigger: AAGGATGCTGGTGAAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACACTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CAA 90 bp TTCCCAAATCAAGTCGTGGGACCACTGGTGGGCAAGAATTCTGGTTaGTCCATGACTCAGAAGTCCACCTTTGTTGTAGAGGCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: FPNQVVGPLVGKNSG*SMTQKSTFVVEASF
Trigger: GAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393284.7
ENST00000409445.7
ENST00000409799.5
ENST00000493070.1
CDS GCA 72 bp GAGCCACTTCCTCATGTAACTTGTGCCTTCAGGATCTaGTTGCGCCCCATCATGTATATACCACTTCCATTT +
Preference number: 6 (lower is better)
Translates to: EPLPHVTCAFRI*LRPIMYIPLPF
Trigger: AAATGGAAGTGGTATATACATGATGGGGCGCAAGCAGATCCTGAAGGCACAAGTTACATGAGGAAGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS GCA 72 bp TTTCTCCTTCCAAGCAAAGTGTACAGCCAGGTGCATTaGTCAAAGTTCTGCATACTGGGGAGATTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: FLLPSKVYSQVH*SKFCILGRFPF
Trigger: GAAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACACTTTGCTTGGAAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 72 bp AAATCAAGTCGTGGGACCACTGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAAGTCCACCTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: KSSRGTTGGQEF*FVHDSEVHLCC
Trigger: ACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGACTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393284.7
ENST00000409445.7
ENST00000409799.5
ENST00000493070.1
CDS CAA 72 bp GTCTTTCTTCCCCTTAGCTCAGATAAGTCTGAGGTCTaGTCTCACAACCAGGAAGAATTTCCAGTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: VFLPLSSDKSEV*SHNQEEFPVCR
Trigger: TCTGCACACTGGAAATTCTTCCTGGTTGTGAGACAAGACCTCAGACTTATCTGAGCTAAGGGGAAGAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548958.2
CDS CAA 72 bp ATTTCTCCTTCCAAGCAAAGTGTACAGCCAGGTGCATaGCTCAAAGTTCTGCATACTGGGGAGATTTCCCTT +
Preference number: 6 (lower is better)
Translates to: ISPSKQSVQPGA*LKVLHTGEISL
Trigger: AAGGGAAATCTCCCCAGTATGCAGAACTTTGAGCAATGCACCTGGCTGTACACTTTGCTTGGAAGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CAA 90 bp TGCTGTAAGATGGCTTTCCTATCCAGAGTCGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACACACTGGTTTAATGTCCTGCACATT +
Preference number: 6 (lower is better)
Translates to: CCKMAFLSRVVRSSV*ASSSCTHWFNVLHI
Trigger: AATGTGCAGGACATTAAACCAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS GCA 72 bp TGGCTTCTTCATCTTGCACACACTGGTTTAATGTCCTaGACATTCATCCTTGTAGAGTCATTCTCGGTCTTC +
Preference number: 6 (lower is better)
Translates to: WLLHLAHTGLMS*TFILVESFSVF
Trigger: GAAGACCGAGAATGACTCTACAAGGATGAATGTGCAGGACATTAAACCAGTGTGTGCAAGATGAAGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS CCA 72 bp AGGTCATCTGTGTTGGCTTCTTCATCTTGCACACACTaGTTTAATGTCCTGCACATTCATCCTTGTAGAGTC +
Preference number: 6 (lower is better)
Translates to: RSSVLASSSCTH*FNVLHIHPCRV
Trigger: GACTCTACAAGGATGAATGTGCAGGACATTAAACCAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS CAA 72 bp ATGGCTTTCCTATCCAGAGTCGTAAGGTCATCTGTGTaGGCTTCTTCATCTTGCACACACTGGTTTAATGTC +
Preference number: 6 (lower is better)
Translates to: MAFLSRVVRSSV*ASSSCTHWFNV
Trigger: GACATTAAACCAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409004.5
CDS CAA 90 bp TCATTTGAGCCACTTCCTCATGTAACTTGTGCCTTCAGGATCTGCTaGCGCCCCATCATGTATATACCACTTCCATTTGATGATGAAATG +
Preference number: 6 (lower is better)
Translates to: SFEPLPHVTCAFRIC*RPIMYIPLPFDDEM
Trigger: CATTTCATCATCAAATGGAAGTGGTATATACATGATGGGGCGCAAGCAGATCCTGAAGGCACAAGTTACATGAGGAAGTGGCTCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS GCA 72 bp CTTCTCTGCAGCCACAATTTCTGCATCCAATTTTCTTaGCCTCTGTTGTTTATCGCAAGAGTTGTCTGCATA +
Preference number: 6 (lower is better)
Translates to: LLCSHNFCIQFS*PLLFIARVVCI
Trigger: TATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393284.7
ENST00000409445.7
ENST00000409799.5
ENST00000436898.5
ENST00000551829.5
ENST00000552497.5
CDS CCA 72 bp AGGTATTATGTTCTGATCACTGGTGGGCAAGAATTCTaGTTTGTCCATGACTCAGAAGTCCACCTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: RYYVLITGGQEF*FVHDSEVHLCC
Trigger: ACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCACCAGTGATCAGAACATAATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436898.5
CDS CAA 72 bp TCTTCTCTGCAGCCACAATTTCTGCATCCAATTTTCTaGCCCTCTGTTGTTTATCGCAAGAGTTGTCTGCAT +
Preference number: 6 (lower is better)
Translates to: SSLQPQFLHPIF*PSVVYRKSCLH
Trigger: ATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393284.7
ENST00000409445.7
ENST00000409799.5
ENST00000436898.5
ENST00000551829.5
ENST00000552497.5
CDS CAA 90 bp CTCTCCTTTGGCAATACTCTCACAGACACACCCAGGAACAATACTTaGCATCGTAACACAAGTCTTTCTTTAGTTTGTCAGACATCTATT +
Preference number: 6 (lower is better)
Translates to: LSFGNTLTDTPRNNT*HRNTSLSLVCQTSI
Trigger: AATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486196.1
CDS TCA 72 bp TTCTGCCTAGATATCCAGGCATTTCCATATGTCCTCTaGAATCTAGGTGGAGGTTTCCAATCTTCAATTCTT +
Preference number: 6 (lower is better)
Translates to: FCLDIQAFPYVL*NLGGGFQSSIL
Trigger: AAGAATTGAAGATTGGAAACCTCCACCTAGATTTCAGAGGACATATGGAAATGCCTGGATATCTAGGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548958.2
CDS TCA 72 bp CTCACAGACACACCCAGGAACAATACTTTGCATCTGTaGATGCCACAATTAGTGAAAAAGATGAATCTTGAT +
Preference number: 6 (lower is better)
Translates to: LTDTPRNNTLHL*MPQLVKKMNLD
Trigger: ATCAAGATTCATCTTTTTCACTAATTGTGGCATTCACAGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328705.7
CDS TCA 72 bp ATTTTCAGGTATTATGTTCTGATCATGATCTATAGGTaGAGTCCCATCTGTAAGTTGAGAAGCAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: IFRYYVLIMIYR*SPICKLRSKEA
Trigger: GGCTTCCTTGCTTCTCAACTTACAGATGGGACTTCACCTATAGATCATGATCAGAACATAATACCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486196.1
CDS TCA 72 bp GATGAAATGCTTCTGTGCATGCCCAACTTTATGGTGTaGATGCCACAATTAGTGAAAAAGATGAATCTTGAT +
Preference number: 6 (lower is better)
Translates to: DEMLLCMPNFMV*MPQLVKKMNLD
Trigger: ATCAAGATTCATCTTTTTCACTAATTGTGGCATTCACACCATAAAGTTGGGCATGCACAGAAGCATTTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548035.1
CDS CCA 72 bp ATTCTACAGGAATCAGCAAATTATTTATGGTTAGAATaGATTAAAAGGTGCCACATAACAGCTCAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: ILQESANYLWLE*IKRCHITAQKA
Trigger: TGCCTTCTGAGCTGTTATGTGGCACCTTTTAATCCATTCTAACCATAAATAATTTGCTGATTCCTGTAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547320.1
CDS CAA 72 bp TTCATAAATCTCATAACTGGGAGTACCCAGGAGGCTTaGTCATGGGTATCTTTATATTCTTTCAGTAATAAT +
Preference number: 6 (lower is better)
Translates to: FINLITGSTQEA*SWVSLYSFSNN
Trigger: ATTATTACTGAAAGAATATAAAGATACCCATGACAAAGCCTCCTGGGTACTCCCAGTTATGAGATTTATGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547320.1