RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPRIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000110888

Ensembl transcript IDs: ENST00000298892.9, ENST00000395805.6, ENST00000417045.5, ENST00000433722.6, ENST00000454014.6, ENST00000534897.5, ENST00000537108.5, ENST00000537553.5, ENST00000538387.1, ENST00000540436.5, ENST00000540584.1, ENST00000541765.5, ENST00000542550.5, ENST00000543380.5, ENST00000546129.1, ENST00000548676.5, ENST00000553026.5

Found 1429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTC +
Preference number: 1 (lower is better)
Translates to: LLRQRVDVYWQYGGC*ICHWHIHRGHATGV
Trigger: GACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp CATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGA +
Preference number: 1 (lower is better)
Translates to: HLLRQRVDVYWQYGG*WICHWHIHRGHATG
Trigger: TCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp CTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTAC +
Preference number: 1 (lower is better)
Translates to: LASAEAEGRRVLAVW*LLDLSLAHPQGSCY
Trigger: GTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGC +
Preference number: 1 (lower is better)
Translates to: QLASAEAEGRRVLAV*WLLDLSLAHPQGSC
Trigger: GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp CCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCTGGGGAGGAGAAATGCAGCATCAGC +
Preference number: 1 (lower is better)
Translates to: PLPWEDLEKLVKTVA*LGELLPGEEKCSIS
Trigger: GCTGATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 90 bp GAGCCCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCTGCCTGGGGAGGAGAAATGCAGCAT +
Preference number: 1 (lower is better)
Translates to: EPFAMGGFGEASEDG*LPGGIAAWGGEMQH
Trigger: ATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 90 bp AGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGA +
Preference number: 1 (lower is better)
Translates to: RVDVYWQYGGCWICH*HIHRGHATGVSLSR
Trigger: TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp GAGCCCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGAGGTCATA +
Preference number: 1 (lower is better)
Translates to: EPFAMGGFGEASEDG*LPGGIAASGVSEVI
Trigger: TATGACCTCAGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR CCA 90 bp CCCTGCTTTGGATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAG +
Preference number: 1 (lower is better)
Translates to: PCFGFRCILLPLARR*LGFGDLLLLLLFRQ
Trigger: CTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp TTGGAGTCTCTGGCTGTTTTGAATCCTGTTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: LESLAVLNPVLHTWE*SMTWWCSVRSAWKV
Trigger: CACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp TTAGGCACATCTTTGGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTaGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTT +
Preference number: 1 (lower is better)
Translates to: LGTSLGSVFNFLGSS*SFGMRLAVATPQDF
Trigger: AAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATGTGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp GGTGCTGTGTTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGATTTGGAGAA +
Preference number: 1 (lower is better)
Translates to: GAVLMVTELLLAGGD*KPCSEPFAMGGFGE
Trigger: TTCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp CCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAA +
Preference number: 1 (lower is better)
Translates to: PTTSTSSNRSPAIDK*LSRSGKHIRLCWVK
Trigger: TTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp TGTTTCCTCTGTTCTAAGGAAACTGCAGGCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAGGACTTAAAGGACTCCTGTTTCTTC +
Preference number: 1 (lower is better)
Translates to: CFLCSKETAGLDTSW*LPEASQDLKDSCFF
Trigger: GAAGAAACAGGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp TCACACATGGGAGTGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCT +
Preference number: 1 (lower is better)
Translates to: SHMGVVHDLVVFCSL*MEGVQDFGVCFFGS
Trigger: AGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp TCTTGTTTCCTCTGTTCTAAGGAAACTGCAGGCTTGGATACCTCCTaGTGCTTACCAGAAGCCTCCCAGGACTTAAAGGACTCCTGTTTC +
Preference number: 1 (lower is better)
Translates to: SCFLCSKETAGLDTS*CLPEASQDLKDSCF
Trigger: GAAACAGGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp GTTTTGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAG +
Preference number: 1 (lower is better)
Translates to: VLNPVLHTWEWSMTW*CSVRSAWKVSKTLE
Trigger: CTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp GCTGTTTTGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTG +
Preference number: 1 (lower is better)
Translates to: AVLNPVLHTWEWSMT*WCSVRSAWKVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp ATCTTTGGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAAT +
Preference number: 1 (lower is better)
Translates to: IFGFCVQLPGQQLVI*YEACCSYSPGLWRN
Trigger: ATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp ACATGGGAGTGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCTTGTT +
Preference number: 1 (lower is better)
Translates to: TWEWSMTWWCSVRSA*KVSKTLEFASLDLV
Trigger: AACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 90 bp ATTGCTAGCAGTTTCATGGTCTGGAGCACCATCATTGGCATAGGCTaGTACCAAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGG +
Preference number: 1 (lower is better)
Translates to: IASSFMVWSTIIGIG*YQDLFILHEVDIQW
Trigger: CCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAGACCATGAAACTGCTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp GCTATTGACAAATGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCTACCATTGCTTACTTGAATAGTTCC +
Preference number: 1 (lower is better)
Translates to: AIDKWLSRSGKHIRL*WVKGKATIAYLNSS
Trigger: GGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 90 bp GGAGTCTCTGAGGTCATAAACTCTGTTTCAGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAAGCATTTGAGCTACAAGTAACTGGA +
Preference number: 1 (lower is better)
Translates to: GVSEVINSVSDPEEA*SVVTKQAFELQVTG
Trigger: TCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATCTGAAACAGAGTTTATGACCTCAGAGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp ATTGACAAATGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACCATTGCTTACTTGAATAGTTCCATC +
Preference number: 1 (lower is better)
Translates to: IDKWLSRSGKHIRLC*VKGKATIAYLNSSI
Trigger: GATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp CCCTGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATaGCTAGGTCCCAGAATTCATATTACTACCTCTTCATCACTTGAT +
Preference number: 1 (lower is better)
Translates to: PCLSTVEGRTESGHL*LGPRIHITTSSSLD
Trigger: ATCAAGTGATGAAGAGGTAGTAATATGAATTCTGGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 90 bp AAAGTTTCTCCTAAGTTGTTCAGAAGAAGATCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: KVSPKLFRRRSNTIG*SKVPGARLEVLAAE
Trigger: CTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTTCTGAACAACTTAGGAGAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 90 bp TCAATTGCTGAGGATGCATACCAGTATTTGCTTTGCACAGCTTGCTaGCTAAGTGAAAGAGTCTTACCAATAATCAGTCTAACAGATGAG +
Preference number: 1 (lower is better)
Translates to: SIAEDAYQYLLCTAC*LSERVLPIISLTDE
Trigger: CTCATCTGTTAGACTGATTATTGGTAAGACTCTTTCACTTAGTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCATCCTCAGCAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 90 bp TCTATGCCTAGGTCCCAGAATTCATATTACTACCTCTTCATCACTTaGTTAGCCAAGTACTCAGAATGCTCAATTCATTTGCTCCGACTT +
Preference number: 1 (lower is better)
Translates to: SMPRSQNSYYYLFIT*LAKYSECSIHLLRL
Trigger: AAGTCGGAGCAAATGAATTGAGCATTCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTAGTAATATGAATTCTGGGACCTAGGCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 90 bp CTGTCCATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATaGAAAGATCTTACCAGTCTCTTGAGAATGGACAGTTTGTTCTAC +
Preference number: 1 (lower is better)
Translates to: LSIQLAVPLSLPNII*KDLTSLLRMDSLFY
Trigger: GTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAATGGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 90 bp ATACAAAAGAAATTAAGACAATTGGTCTTTTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTCAGATCCAGAAGAAGCCTGATCGGT +
Preference number: 1 (lower is better)
Translates to: IQKKLRQLVFYLRSL*GHKLCFRSRRSLIG
Trigger: ACCGATCAGGCTTCTTCTGGATCTGAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTAAAAGACCAATTGTCTTAATTTCTTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 90 bp AGGCATTGTAACTTGCCTGGACTTGAGGCAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGGATTAAGTGCAAACAATATACATTC +
Preference number: 1 (lower is better)
Translates to: RHCNLPGLEAVSLVS*TLIQLRIKCKQYTF
Trigger: GAATGTATATTGTTTGCACTTAATCCTTAACTGTATTAACGTTCAGCTTACTAAACTGACTGCCTCAAGTCCAGGCAAGTTACAATGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: EAEGRRVLAVWWLLD*SLAHPQGSCYGSLL
Trigger: AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GAGGTGACTGGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTG +
Preference number: 2 (lower is better)
Translates to: EVTGSPVQSPLPWED*EKLVKTVACLGELL
Trigger: CAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCCAGTCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GAGGATTTGGAGAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATaGCTGCCTGGGGAGGAGAAATGCAGCATCAGCCAATCACCTGCC +
Preference number: 2 (lower is better)
Translates to: EDLEKLVKTVACLGE*LPGEEKCSISQSPA
Trigger: GGCAGGTGATTGGCTGATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CCCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCCTGGGGAGGAGAAATGCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: PFAMGGFGEASEDGC*PGGIAAWGGEMQHQ
Trigger: CTGATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCCSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 2 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKARGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: VPGARLEVLAAEKATRICDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: VPGARLEVLAAEKATRICQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: EASEDGCLPGGIAASGVSPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: EASEDGCLPGGIAASGVSFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRICWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIALDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 2 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 2 (lower is better)
Translates to: GCWICHWHIHRGHATGVSGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 2 (lower is better)
Translates to: WSKVPGARLEVLAAEKATPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTTAAAGGTTTCGTTGTCTCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: ICHWHIHRGHATGVS*SRVTTVKGFVVSFW
Trigger: CCAGAAAGAGACAACGAAACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATGGCTTGGATTaGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAGACCTG +
Preference number: 2 (lower is better)
Translates to: DLGVSCFHWLGDGLD*EISCFFCSSGRVDL
Trigger: CAGGTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 2 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: EASEDGCLPGGIAASGVSDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR GCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: EELKNCMIASSFMVWSTIRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: VPGARLEVLAAEKATRICVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 2 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCAGGCTGAAGTGCAGTaGCACAATCTCTGCAACCCC +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSEQAEVQ*HNLCNP
Trigger: GGGGTTGCAGAGATTGTGCCACTGCACTTCAGCCTG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp GCTTTGGATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTA +
Preference number: 2 (lower is better)
Translates to: ALDLGVSCFHWLGDG*DLEISCFFCSSGRV
Trigger: TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp CTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTGGTGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LHGRCPRLWSLLLWI*FFLQLNWPQLWCLL
Trigger: CAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: VRSAWKVSKTLEFAS*DLVLSAAELATALV
Trigger: CACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GGCTGTTTTGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTT +
Preference number: 2 (lower is better)
Translates to: GCFESCSSHMGVVHD*VVFCSLCMEGVQDF
Trigger: AAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 2 (lower is better)
Translates to: GCISGWANSIRDSDSLTDRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 2 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: SYFHKLLPCADVTISGLPDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSEPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: LVSLEELKNCMIASSFMVCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: SYFHKLLPCADVTISGLPVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 2 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: SYFHKLLPCADVTISGLPFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISALAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp AGTTTTGAGGTGTCTTGTTTCCTCTGTTCTAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTACCAGAAGCCTCCCAGGACTTAAAG +
Preference number: 2 (lower is better)
Translates to: SFEVSCFLCSKETAG*DTSWCLPEASQDLK
Trigger: CTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACAAGACACCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: HKLLPCADVTISGLPGRAYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: WSKVPGARLEVLAAEKATRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISASGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTGCAAGTTCTTTAGGATaGCATTTGGACACAGGAATG +
Preference number: 2 (lower is better)
Translates to: WSKVPGARLEVLAAEKATASSLG*HLDTGM
Trigger: CATTCCTGTGTCCAAATGTCATCCTAAAGAACTTGC...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 2 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIALLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: HKLLPCADVTISGLPGRAHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SRSGKHIRLCWVKGKATICIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: ISSYFHKLLPCADVTISGSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp ACTTGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTG +
Preference number: 2 (lower is better)
Translates to: TWWCSVRSAWKVSKT*EFASLDLVLSAAEL
Trigger: CAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GACTCTCAACATTGTTTTCCCAGGATTTTGGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTGGTGG +
Preference number: 2 (lower is better)
Translates to: DSQHCFPRILESLAV*NPVLHTWEWSMTWW
Trigger: CCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACAATGTTGAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISATTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSYLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: EELKNCMIASSFMVWSTIQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCCAGTGGCACAATCTCTaGAACCCCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTQWHNL*NPRLLG
Trigger: ACCCAGGAGGCGGGGGTTGCAGAGATTGTGCCACTG...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 2 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: VATPQDFGEICDCDVKECRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: ISSYFHKLLPCADVTISGLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp CTTTTGTTCCTCTTGAACATACCCTGCTTTGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGATGGCTTGGATTTGGAGATCTCCTG +
Preference number: 2 (lower is better)
Translates to: LLFLLNIPCFGFRCI*LPLARRWLGFGDLL
Trigger: CAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTaGGTGTCTCCTGTTTCTTTTGTTCCTCTTGAACATACCCTGCTT +
Preference number: 2 (lower is better)
Translates to: ASLDLVLSAAELATA*VSPVSFVPLEHTLL
Trigger: AAGCAGGGTATGTTCAAGAGGAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 2 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 2 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGGTCCTTTTCAAACCCTaGAATGGTAATTTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLVLFKP*NGNFQL
Trigger: TAACTGGAAATTACCATTTCAGGGTTTGAAAAGGAC...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTATCAGGATGATAATTTaGTGCAGTCTCTTGAGAATG +
Preference number: 2 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAIRMII*CSLLRM
Trigger: CATTCTCAAGAGACTGCAGCAAATTATCATCCTGAT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISACWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 2 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSEGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp TTTCTGCAGCTGAACTGGCCACAGCTTTGGTGTCTCCTGTTTCTTTaGTTCCTCTTGAACATACCCTGCTTTGGATTTAGGTGTATCTTG +
Preference number: 2 (lower is better)
Translates to: FLQLNWPQLWCLLFL*FLLNIPCFGFRCIL
Trigger: CAAGATACACCTAAATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp TCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SIRMIICCSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR TCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: ISSYFHKLLPCADVTISGYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 2 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSESWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GGAGTAGCTGAAGGCGGTTGTGACGTTGGAATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: GVAEGGCDVGIALEG*SKSRTDSCIKLQVP
Trigger: AGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAACGTCACAACCGCCTTCAGCTACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp AGTTCCATCAGGATGATAATTTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SSIRMIICSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAATTATCATCCTGATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR CAA 90 bp CACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: HIRLCWVKGKATIAY*NSSIRMIICCSLLR
Trigger: TCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: VATPQDFGEICDCDVKECIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISASRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISAVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAAACCAATCTCAACTAGATTGTGAAGCAGACAGCTGTGAGTTACTTGGTAACCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: KNQSQLDCEADSCELLGNLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GTTACCAAGTAACTCACAGCTGTCTGCTTCACAATCTAGTTGAGATTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp CACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCAGTCTCTTGAGAATG +
Preference number: 2 (lower is better)
Translates to: HIRLCWVKGKATIAY*NSSIRMIICSLLRM
Trigger: CATTCTCAAGAGACTGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR TCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: EATSQFIKCQISANCHSAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 2 (lower is better)
Translates to: EATSQFIKCQISANCHSARVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSETFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp AATATCATATGCAAAGATCTTACCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: NIICKDLTSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCTGCTTAAGAAAAACG +
Preference number: 2 (lower is better)
Translates to: HIRLCWVKGKATIAY*NSSIRMIICCLRKT
Trigger: CGTTTTTCTTAAGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: ICSLLRMDSLFYMYRWQLSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TGCTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 2 (lower is better)
Translates to: CCSLLRMDSLFYMYRWQLGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 2 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 2 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAAACCAATCTCAACTAGATTGTGAAGCAGACAGCTGTGAGTTACTTGGTAACCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 2 (lower is better)
Translates to: KNQSQLDCEADSCELLGNLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GTTACCAAGTAACTCACAGCTGTCTGCTTCACAATCTAGTTGAGATTGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CAGGAATGCAAAAGAATAGCTTTTGCTTACAATTTCAAATCTCAATaGCTGAGGATGCATACCAGTATTTGCTTTGCACAGCTTGCTGAC +
Preference number: 2 (lower is better)
Translates to: QECKRIAFAYNFKSQ*LRMHTSICFAQLAD
Trigger: GTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCATCCTCAGCAATTGAGATTTGAAATTGTAAGCAAAAGCTATTCTTTTGCATTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGTCTCTaGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: PLSLPNIICKDLTSL*RMDSLFYMYRWQLA
Trigger: TGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 2 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTGGCACATCCACAGGGG +
Preference number: 3 (lower is better)
Translates to: AEAEGRRVLAVW*LLDLSLAHPQG
Trigger: CCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCATGCTACGGGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: VYWQYGGCWICH*HIHRGHATGVS
Trigger: GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 3 (lower is better)
Translates to: EASEDGCLPGGIAASGVSATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 3 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 3 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp AGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCACATCCACAGGGGTCAT +
Preference number: 3 (lower is better)
Translates to: RQRVDVYWQYGG*WICHWHIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATCCACAGGGGTCATGCT +
Preference number: 3 (lower is better)
Translates to: QRVDVYWQYGGC*ICHWHIHRGHA
Trigger: AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGGATTTGTCACTGGCAC +
Preference number: 3 (lower is better)
Translates to: NSHLLRQRVDVY*QYGGCWICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp GGATCCTTCGGAAGGGTAGAGGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACATCTTTGGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: GSFGRVEEEPTG*CTGLGTSLGSV
Trigger: CACAGAACCCAAAGATGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTCCTCTACCCTTCCGAAGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp CCTGTTCTTCACACATGGGAGTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAG +
Preference number: 3 (lower is better)
Translates to: PVLHTWEWSMTW*CSVRSAWKVSK
Trigger: CTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: KVPGARLEVLAAEKATRIKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: WSKVPGARLEVLAAEKATTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 3 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 3 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 3 (lower is better)
Translates to: VPGARLEVLAAEKATRICSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: VPGARLEVLAAEKATRICLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 3 (lower is better)
Translates to: SYFHKLLPCADVTISGLPGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGACCCTGCTCTCGAATTaGCTCGTGGACCACCAGATG +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWTLLSN*LVDHQM
Trigger: CATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR TCA 72 bp CATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTaGGTAGGTCTGGGAAACACATTCGTCTGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: HPLTDPRLLTNG*VGLGNTFVCAG
Trigger: CCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp TGTTCTAAGGAAACTGCAGGCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAGGACTTAAAGGACTCC +
Preference number: 3 (lower is better)
Translates to: CSKETAGLDTSW*LPEASQDLKDS
Trigger: GGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGACCTGAGTTTTGAGGTG +
Preference number: 3 (lower is better)
Translates to: GDGLDLEISCFF*SSGRVDLSFEV
Trigger: CACCTCAAAACTCAGGTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp GGAGTGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTC +
Preference number: 3 (lower is better)
Translates to: GVVHDLVVFCSL*MEGVQDFGVCF
Trigger: GAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: NPVLHTWEWSMT*WCSVRSAWKVS
Trigger: GGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TTCTGTGTTCAACTTCCTGGGCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTT +
Preference number: 3 (lower is better)
Translates to: FCVQLPGQQLVI*YEACCSYSPGL
Trigger: AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AGAAGAATCACTCCACCCTGCTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCCTCGCTTATAACACTG +
Preference number: 3 (lower is better)
Translates to: RRITPPCSRICS*TTRCPSSLITL
Trigger: CAGTGTTATAAGCGAGGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGTGGAGTGATTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 3 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: QYGGCWICHWHIHRGHATSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SLEELKNCMIASSFMVWSWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTATTTGCTGCAGTCTCTaGAGAATGGACAGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAICCSL*RMDSLF
Trigger: GAACAAACTGTCCATTCTCAAGAGACTGCAGCAAAT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR CCA 72 bp CTGGCTGTTTTGAATCCTGTTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: LAVLNPVLHTWE*SMTWWCSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LMVTELLLAGGD*KPCSEPFAMGG
Trigger: TCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: SYFHKLLPCADVTISGLPTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCATTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 3 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 3 (lower is better)
Translates to: KVPGARLEVLAAEKATRILTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWLPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 3 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHLRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GGATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: GFRCILLPLARR*LGFGDLLLLLL
Trigger: GAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: WSMTWWCSVRSA*KVSKTLEFASL
Trigger: CAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AGTACATCCTCTAACAGATCCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: STSSNRSPAIDK*LSRSGKHIRLC
Trigger: GCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 3 (lower is better)
Translates to: SLEELKNCMIASSFMVWSGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 3 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 3 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 3 (lower is better)
Translates to: YFHKLLPCADVTISGLPGPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 72 bp TCTCATAATGAAGCAGTTAGCTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCCTCGCTTATAACACTG +
Preference number: 3 (lower is better)
Translates to: SHNEAVSSRICS*TTRCPSSLITL
Trigger: CAGTGTTATAAGCGAGGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGAGCTAACTGCTTCATTATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: HSLTSEATSQFIKCQISATRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 3 (lower is better)
Translates to: SLEELKNCMIASSFMVWSSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 3 (lower is better)
Translates to: YFHKLLPCADVTISGLPGKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: HSLTSEATSQFIKCQISALLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 3 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLISEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGCCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 3 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 3 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTCATCAGGATGATAATTaGCTGCAGTCTCTTGAGAAT +
Preference number: 3 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAHQDDN*LQSLEN
Trigger: ATTCTCAAGAGACTGCAGCAAATTATCATCCTGATG...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR TCA 72 bp AGTTTCATGGTCTGGAGCACCATCATTGGCATAGGCTaGTACCAAGACCTCTTCATTCTTCATGAGGTTGAC +
Preference number: 3 (lower is better)
Translates to: SFMVWSTIIGIG*YQDLFILHEVD
Trigger: GTCAACCTCATGAAGAATGAAGAGGTCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAGACCATGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGTGTACTTGCTGTGGTA +
Preference number: 3 (lower is better)
Translates to: EWTVCSTCIDGS*HWGGVCVLAVV
Trigger: TACCACAGCAAGTACACAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 3 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 3 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTCCTGTTTCTTTTGTTC +
Preference number: 3 (lower is better)
Translates to: LLLWILFFLQLN*PQLWCLLFLLF
Trigger: GAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 3 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp GAGGTCATAAACTCTGTTTCAGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAAGCATTTGAGCTACAA +
Preference number: 3 (lower is better)
Translates to: EVINSVSDPEEA*SVVTKQAFELQ
Trigger: TTGTAGCTCAAATGCTTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATCTGAAACAGAGTTTATGACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp TCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATaGCTAGGTCCCAGAATTCATATTACTACCTCTTCA +
Preference number: 3 (lower is better)
Translates to: STVEGRTESGHL*LGPRIHITTSS
Trigger: TGAAGAGGTAGTAATATGAATTCTGGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 72 bp CCTAAGTTGTTCAGAAGAAGATCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PKLFRRRSNTIG*SKVPGARLEVL
Trigger: CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTTCTGAACAACTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TGGTTCAGTAAGCATATCCCAACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGCTTCCCAAGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: WFSKHIPTFWEI*FSSIICFPRLL
Trigger: GAGCAACCTTGGGAAGCAGATTATGCTAGAAAACCAAATCTCCCAAAACGTTGGGATATGCTTACTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp ACAGTTTGTTCTACATGTATAGATGGCAGTTGGCACTaGGGTGGTGTTTGTGTACTTGCTGTGGTAAAACTT +
Preference number: 3 (lower is better)
Translates to: TVCSTCIDGSWH*GGVCVLAVVKL
Trigger: AAGTTTTACCACAGCAAGTACACAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMSYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 3 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATTTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: ICSLLRMDSLFYMYRWQLKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGCTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 3 (lower is better)
Translates to: CCSLLRMDSLFYMYRWQLTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGCATCAGGATGATAATTaGCAGTCTCTTGAGAATGGA +
Preference number: 3 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWHQDDN*QSLENG
Trigger: TCCATTCTCAAGAGACTGCAAATTATCATCCTGATG...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 3 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 3 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 72 bp ATCTGCTTCCCAAGGTTGCTCTTCGCCTTGTTTGTTTaGATAATCTACTTCTGTCATATAGCGTCTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ICFPRLLFALFV*IIYFCHIASVK
Trigger: CTTAACAGACGCTATATGACAGAAGTAGATTATTCAAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATGGTTACTGAACTACTA +
Preference number: 3 (lower is better)
Translates to: RGALTLNTVCMA*KGAVLMVTELL
Trigger: TAGTAGTTCAGTAACCATTAACACAGCACCCTTTCAAGCCATGCAGACAGTATTTAACGTTAATGCACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp GAGGATGCATACCAGTATTTGCTTTGCACAGCTTGCTaGCTAAGTGAAAGAGTCTTACCAATAATCAGTCTA +
Preference number: 3 (lower is better)
Translates to: EDAYQYLLCTAC*LSERVLPIISL
Trigger: TAGACTGATTATTGGTAAGACTCTTTCACTTAGTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCATCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 72 bp CAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATaGAAAGATCTTACCAGTCTCTTGAGAATGGACAGT +
Preference number: 3 (lower is better)
Translates to: QLAVPLSLPNII*KDLTSLLRMDS
Trigger: ACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 3 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AACTTGCCTGGACTTGAGGCAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGGATTAAGTGCAAACAA +
Preference number: 3 (lower is better)
Translates to: NLPGLEAVSLVS*TLIQLRIKCKQ
Trigger: TTGTTTGCACTTAATCCTTAACTGTATTAACGTTCAGCTTACTAAACTGACTGCCTCAAGTCCAGGCAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AAATTAAGACAATTGGTCTTTTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTCAGATCCAGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: KLRQLVFYLRSL*GHKLCFRSRRS
Trigger: GCTTCTTCTGGATCTGAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTAAAAGACCAATTGTCTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 72 bp AACCCAAACTGGCATAAGTCAGCAAGTTCTTTAGGATaGCATTTGGACACAGGAATGCAAAAGAATAGCTTT +
Preference number: 3 (lower is better)
Translates to: NPNWHKSASSLG*HLDTGMQKNSF
Trigger: AAAGCTATTCTTTTGCATTCCTGTGTCCAAATGTCATCCTAAAGAACTTGCTGACTTATGCCAGTTTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 3 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLILEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AGGTCCCAGAATTCATATTACTACCTCTTCATCACTTaGTTAGCCAAGTACTCAGAATGCTCAATTCATTTG +
Preference number: 3 (lower is better)
Translates to: RSQNSYYYLFIT*LAKYSECSIHL
Trigger: CAAATGAATTGAGCATTCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTAGTAATATGAATTCTGGGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 72 bp TTCTTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGTCTGCATGGCTTGAAA +
Preference number: 3 (lower is better)
Translates to: FFYFLFFSWRQR*INVKYCLHGLK
Trigger: TTTCAAGCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 3 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp CTGGAGGTGGACAGTGGTAATAATTACACAACAGTTTaGTTGTACTTAATGCCACAGAACTATATAGTTAAA +
Preference number: 3 (lower is better)
Translates to: LEVDSGNNYTTV*LYLMPQNYIVK
Trigger: TTTAACTATATAGTTCTGTGGCATTAAGTACAACCAAACTGTTGTGTAATTATTACCACTGTCCACCTCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCACAGAACAGGCCCCATaGACGCCAGCGCGCACCCCC +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCTEQAP*TPARTP
Trigger: GGGGGTGCGCGCTGGCGTGCATGGGGCCTGTTCTGT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCTTCCCCGATTGCTCTaGGGCCTACAAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLPRLL*GLQGNP
Trigger: TGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHRRLLA*GNCCLR
Trigger: CCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCRRLLA*GNCCLR
Trigger: CCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTACTGTCCTCGGCCTCCTaGGTACCTGGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVLSSAS*VPGTRG
Trigger: GCCTCTAGTCCCAGGTACTCAGGAGGCCGAGGACAG...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACAGTGGCACAATCTCTaGAACCCCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRQWHNL*NPRLLG
Trigger: ACCCAGGAGGCGGGGGTTGCAGAGATTGTGCCACTG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTTCCCCGATTGCTCTaGGGCCTACAAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLLPRLL*GLQGNP
Trigger: TGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPRRLLA*GNCCLR
Trigger: CCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
3UTR CAA 72 bp GGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAGGGGTCATGCTACGGG +
Preference number: 4 (lower is better)
Translates to: GRRVLAVWWLLD*SLAHPQGSCYG
Trigger: CCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp GGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACGGTTGCTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSPVQSPLPWED*EKLVKTVACLG
Trigger: CCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGCCTGGGGGAATTGCTaGCTGGGGAGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRAWGNC*LGRRNA
Trigger: TGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRRRLLA*GNCCLG
Trigger: CCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTAATCAGTGGCCCTTaGGCACTTACGTATCCGTCT +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLISGP*ALTYPS
Trigger: AGACGGATACGTAAGTGCGCAAGGGCCACTGATTAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPCSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTYLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRITTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHADLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGCAATCCATCACTACTaGACATTTGCAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTAIHHY*TFADRY
Trigger: GTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCACAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WSKVPGARLEVLAAEKATRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRALAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTTAAAGGTTTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVS*SRVTTVKGFVV
Trigger: GACAACGAAACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCGAGCTCGAAACCCAATaGTGCTTGAGATACTTGTAC +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVELETQ*CLRYLY
Trigger: GTACAAGTATCTCAAGCATCATTGGGTTTCGAGCTC...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGGAGCTCGAAACCCAATaGTGCTTGAGATACTTGTAC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWELETQ*CLRYLY
Trigger: GTACAAGTATCTCAAGCATCATTGGGTTTCGAGCTC...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTCTTTTCCACAGAAGTaGGCTCGAAACCCAATGATG +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTSFPQK*ARNPMM
Trigger: CATCATTGGGTTTCGAGCTCACTTCTGTGGAAAAGA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCATGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHSSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRSSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPCRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESCRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGTTAGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRVSSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCTAAC...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000537553.5
CDS-3UTR GCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTTAGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLVSSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCTAAC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000537553.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATGCTGGAAATTATCCTaGCCTTCCCCAGCAACCAAA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPCWKLS*PSPATK
Trigger: TTTGGTTGCTGGGGAAGGCCAGGATAATTTCCAGCA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433722.6
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTTCTTTTCCACAGAAGTaGGCTCGAAACCCAATGATG +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSSFPQK*ARNPMM
Trigger: CATCATTGGGTTTCGAGCTCACTTCTGTGGAAAAGA...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKACSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRITVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTACAGAACAGGCCCCATaGACGCCAGCGCGCACCCCC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISTEQAP*TPARTP
Trigger: GGGGGTGCGCGCTGGCGTGCATGGGGCCTGTTCTGT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATCACTACTGGACATTTaGAGACAGGTACTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSLLDI*RQVLSQ
Trigger: TTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATCACTACTGGACATTTaGAGACAGGTACTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESSLLDI*RQVLSQ
Trigger: TTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRISSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICKYKDD*SIWSST
Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHACRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCATGCATACCAGTATTTaGTTTGCACAGCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCMHTSI*FAQLAD
Trigger: GTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCAT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCTTGCCTGGGGGAATTaGTGCCTGGGGAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPLAWGN*CLGRRN
Trigger: ATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGCCAAGTACTCAGAATaGTCAATTCATTTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCAKYSE*SIHLLR
Trigger: TCGGAGCAAATGAATTGAGCATTCTGAGTACTTGGC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGCAATCCATCACTACTaGACATTTGCAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPAIHHY*TFADRY
Trigger: GTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: WSKVPGARLEVLAAEKATPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: EASEDGCLPGGIAASGVSSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGAGATGAAAAGTTCTaGAGGTGGACAGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPGDEKF*RWTVVI
Trigger: TATTACCACTGTCCACCTCCAGAACTTTTCATCTCC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp GAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ESCSSHMGVVHD*VVFCSLCMEGV
Trigger: GACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTCTCCGGGGGAGCCTaGGCGAAGAGCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAVSGGA*AKSTSP
Trigger: GGGAGAGGTGCTCTTCGCTCAGGCTCCCCCGGAGAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHASLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCACGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHACVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAGCGAGCCCTTCCCGTaGCCTAATCAGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISASEPFP*PNQWPL
Trigger: CAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKASSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLKYKDD*SIWSST
Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRISASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHADLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGAATCACTCCACCCTaGTGTTTTATTAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVRITPP*CFISNS
Trigger: ACTGTTGCTAATAAAACAGCAGGGTGGAGTGATTCT...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000537553.5
CDS-3UTR CCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: EASEDGCLPGGIAASGVSVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGTCTCCGGGGGAGCCTaGGCGAAGAGCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKVSGGA*AKSTSP
Trigger: GGGAGAGGTGCTCTTCGCTCAGGCTCCCCCGGAGAC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATATAATCCTCCAGTTTaGGCTTCTTTTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESYNPPV*ASFSRC
Trigger: ACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRINQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GCISGWANSIRDSDSLTDSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGCAAGTTCTTTAGGATaGCATTTGGACACAGGAATG +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIASSLG*HLDTGM
Trigger: CATTCCTGTGTCCAAATGTCATCCTAAAGAACTTGC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTACCTCTTCATCACTTaGTTAGCCAAGTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRYLFIT*LAKYSE
Trigger: TTCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTA...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTATGCTACAACATGAATaGACCCTTAAGACATGCCAA +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLMLQHE*TLKTCQ
Trigger: TTGGCATGTCTTAAGGGTTCATTCATGTTGTAGCAT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGATGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GCISGWANSIRDSDSLTDHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAAGAATCACTCCACCCTaGTGTTTTATTAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSRITPP*CFISNS
Trigger: ACTGTTGCTAATAAAACAGCAGGGTGGAGTGATTCT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000537553.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATCAATCCTGAACGTTTaGAAGAAAATCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESSILNV*KKIQTH
Trigger: GTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTCAATCCTGAACGTTTaGAAGAAAATCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTSILNV*KKIQTH
Trigger: GTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAARKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRASVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRALEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGAAAAGTTCTGGAGGTaGACAGTGGTAATAATTACA +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTEKFWR*TVVIIT
Trigger: TGTAATTATTACCACTGTCCACCTCCAGAACTTTTC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTTTATAGCTCTAAGTaGACCAGCAGCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGFYSSK*TSSFLN
Trigger: GTTCAAGAAGCTGCTGGTTCACTTAGAGCTATAAAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTATAATCCTCCAGTTTaGGCTTCTTTTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWYNPPV*ASFSRC
Trigger: ACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKARAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: EASEDGCLPGGIAASGVSISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAACLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAATCAGTCTAACAGATaGGGGGCTGAACTTTTTATA +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHNQSNR*GAELFI
Trigger: TATAAAAAGTTCAGCCCCTCATCTGTTAGACTGATT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTAGCTTGCTGACTAAGTaGAAGAGTCTTACCAATAAT +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLSLLTK*KSLTNN
Trigger: ATTATTGGTAAGACTCTTTCACTTAGTCAGCAAGCT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCTTTGCACAGCTTGCTaGCTAAGTGAAAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATLCTAC*LSERVL
Trigger: TAAGACTCTTTCACTTAGTCAGCAAGCTGTGCAAAG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRILLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: VATPQDFGEICDCDVKECASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGATCAGGATGATAATTTaGTGCAGTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATIRMII*CSLLRM
Trigger: CATTCTCAAGAGACTGCAGCAAATTATCATCCTGAT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCCGTGCCCTAATCAGTaGCCCTTGCGCACTTACGTA +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAPCPNQ*PLRTYV
Trigger: TACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGTCTTTTCCACAGAAGTaGGCTCGAAACCCAATGATG +
Preference number: 4 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLSFPQK*ARNPMM
Trigger: CATCATTGGGTTTCGAGCTCACTTCTGTGGAAAAGA...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR TCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAASCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTATTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFCSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGTCTGTGCAGTCTCTTaGGAATGGACAGTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPVCAVS*EWTVCS
Trigger: AGAACAAACTGTCCATTCTCAAGAGACTGCACAGAC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS-3UTR GCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCATGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
CDS-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTAGAATCACTCCACCCTaGTGTTTTATTAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKARITPP*CFISNS
Trigger: ACTGTTGCTAATAAAACAGCAGGGTGGAGTGATTCT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTTATTCTCAGTTGTTTaGTTTAGACTAGCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVLFSVV*FRLAQN
Trigger: GTTTTGGGCTAGTCTAAACCAAACAACTGAGAATAA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACTTCCCCGATTGCTCTaGGGCCTACAAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGLPRLL*GLQGNP
Trigger: TGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATCAATCCTGAACGTTTaGAAGAAAATCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRSILNV*KKIQTH
Trigger: GTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAALLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp AGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RCPRLWSLLLWI*FFLQLNWPQLW
Trigger: CCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp GCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACA +
Preference number: 4 (lower is better)
Translates to: AWKVSKTLEFAS*DLVLSAAELAT
Trigger: TGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGAGCTCGAAACCCAATaGTGCTTGAGATACTTGTAC +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASELETQ*CLRYLY
Trigger: GTACAAGTATCTCAAGCATCATTGGGTTTCGAGCTC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCTAATCAGTGGCCCTTaGGCACTTACGTATCCGTCT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISALISGP*ALTYPS
Trigger: AGACGGATACGTAAGTGCGCAAGGGCCACTGATTAG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVKYKDD*SIWSST
Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISADLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGCCGTGCCCTAATCAGTaGCCCTTGCGCACTTACGTA +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKPCPNQ*PLRTYV
Trigger: TACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGG...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VATPQDFGEICDCDVKECVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp AGCCTCCCAGGACTTAAAGGACTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAGCATATCCCAACGTTT +
Preference number: 4 (lower is better)
Translates to: SLPGLKGLLFLL*TIWFSKHIPTF
Trigger: AAACGTTGGGATATGCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAGTCCTTTAAGTCCTGGGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp CTCTTGAACATACCCTGCTTTGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGATGGCTTGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: LLNIPCFGFRCI*LPLARRWLGFG
Trigger: TCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp CATTGTTTTCCCAGGATTTTGGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACATGGGAGTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: HCFPRILESLAV*NPVLHTWEWSM
Trigger: CATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp CGGCTCTTGAAGAAAATCACTTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGGGCTACCTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RLLKKITLTGQI*FFRCYGATWSS
Trigger: GCTACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAAAGTGATTTTCTTCAAGAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTATAATCCTCCAGTTTaGGCTTCTTTTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGYNPPV*ASFSRC
Trigger: ACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCTCACTACTGGACATTTaGAGACAGGTACTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTISLLDI*RQVLSQ
Trigger: TTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGA...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISASSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 4 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTISWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGCCTGGGGAGGAGAAATaGAGCATCAGCCAATCACCT +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKPGEEK*SISQSP
Trigger: AGGTGATTGGCTGATGCTGCATTTCTCCTCCCCAGG...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGAATCAGGTCATCTATaGCTAGGTCCCAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASESGHL*LGPRIH
Trigger: ATGAATTCTGGGACCTAGGCATAGATGACCTGATTC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGCAATCCATCACTACTaGACATTTGCAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGAIHHY*TFADRY
Trigger: GTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCTTCCCCGATTGCTCTaGGGCCTACAAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLPRLL*GLQGNP
Trigger: TGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISASVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VATPQDFGEICDCDVKECGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp TGCAAAGATCTTACCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: CKDLTSLLRMDS*FYMYRWQLALG
Trigger: CCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGAGCTCGAAACCCAATaGTGCTTGAGATACTTGTAC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAELETQ*CLRYLY
Trigger: GTACAAGTATCTCAAGCATCATTGGGTTTCGAGCTC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: GCISGWANSIRDSDSLTDHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISCSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAYLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000537553.5
CDS-3UTR TCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTATCTTACCAGTCTCTTaGGAATGGACAGTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLILPVS*EWTVCS
Trigger: AGAACAAACTGTCCATTCTCAAGAGACTGGTAAGAT...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCAGGATGATAATTTGCTaGAGTCTCTTGAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIRMIIC*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAGCAAATTATCATCCT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGCAATCCATCACTACTaGACATTTGCAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAAIHHY*TFADRY
Trigger: GTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSASRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGCAGGCTGAAGTGCAGTaGCACAATCTCTGCAACCCC +
Preference number: 4 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLQAEVQ*HNLCNP
Trigger: GGGGTTGCAGAGATTGTGCCACTGCACTTCAGCCTG...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp AGGATGATAATTTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: RMIICSLLRMDS*FYMYRWQLALG
Trigger: CCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAATTATCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR CAA 72 bp CCTTTGGGAATAAGGTGCTCCAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATAATTTCCATTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PLGIRCSRILSS*ELQLAIISIGN
Trigger: ATTTCCAATGGAAATTATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCTGGAGCACCTTATTCCCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp TTTGAAGGCAAATACACTGCACCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGCTCCTGTGTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: FEGKYTAPFKPP*KSFCTCSCVKF
Trigger: GAACTTGACACAGGAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGTATTTGCCTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp GTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATaGGCTGTCCCTCTAAGTCTTCCAAATATCATATGC +
Preference number: 4 (lower is better)
Translates to: VTTDFLDLLSIQ*AVPLSLPNIIC
Trigger: GCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp ATGATAATTTGCTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: MIICCSLLRMDS*FYMYRWQLALG
Trigger: CCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCAAATTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR CAA 72 bp CTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LCWVKGKATIAY*NSSIRMIICCS
Trigger: ACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR TCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTTTTATAGCTCTAAGTaGACCAGCAGCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFFYSSK*TSSFLN
Trigger: GTTCAAGAAGCTGCTGGTTCACTTAGAGCTATAAAA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATCTTTTCCACAGAAGTaGGCTCGAAACCCAATGATG +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGSFPQK*ARNPMM
Trigger: CATCATTGGGTTTCGAGCTCACTTCTGTGGAAAAGA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSACSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCACTACTGGACATTTaGAGACAGGTACTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISASLLDI*RQVLSQ
Trigger: TTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKYKDD*SIWSST
Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISADLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLILFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTATTTGGACACAGGAATaGAAAAGAATAGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIIWTQE*KRIAFA
Trigger: AGCAAAAGCTATTCTTTTGCATTCCTGTGTCCAAAT...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCAATTACACAACAGTTTaGTTGTACTTAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSNYTTV*LYLMPQ
Trigger: CTGTGGCATTAAGTACAACCAAACTGTTGTGTAATT...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp ATACACTGCACCATTCAAACCCCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAAGTTCTGCAATACATA +
Preference number: 4 (lower is better)
Translates to: IHCTIQTPFEVF*YVLLCQVLQYI
Trigger: TATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp CTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LCWVKGKATIAY*NSSIRMIICCL
Trigger: TAAGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
CDS-3UTR TCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSATVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAAATACACTGCACCATTCAAACCCCCTTTGAAGTCTTTTTGTACGTGCTCGTCCTTTTCAAACCCTaGAATGGTAATTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: RQIHCTIQTPFEVFLYVLVLFKP*NGNFQL
Trigger: TAACTGGAAATTACCATTTCAGGGTTTGAAAAGGAC...GAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGTATTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTCAAATCTCAATTGCTaGGGATGCATACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGSNLNC*GCIPVF
Trigger: AAATACTGGTATGCATCCTCAGCAATTGAGATTTGA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTCGTGGAGGCAGAGGTaGATTAACGTTAAATACCTC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISSWRQR*INVKYL
Trigger: GAGGTATTTAACGTTAATGCACCTCTGCCTCCACGA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298892.9
CDS-3UTR GCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTTGAAGTCTTTTTGTACGTGCTCCTGTGTCAAGTTCTGCAATACATACTGAACGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: FEVFLYVLLCQVLQYILNGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...GTTCAGTATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISATFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSASCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISALIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTTGAAGTCTTTTTGTACGTGCTCCTGTGTCAAGTTCTGCAATACATACTGAACATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: FEVFLYVLLCQVLQYILNIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...GTTCAGTATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGGACAGTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LNSSIRMIICCSLLRMDSDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...ACTGTCCATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR GCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 4 (lower is better)
Translates to: VATPQDFGEICDCDVKECWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATCTTCCAAATATCATATaGAAAGATCTTACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GCISGWANSIRDSDSLTDLPNII*KDLTSL
Trigger: GAGACTGGTAAGATCTTTGCATATGATATTTGGAAG...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTTATTCTCAGTTGTTTaGTTTAGACTAGCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ISSYFHKLLPCADVTISGLFSVV*FRLAQN
Trigger: GTTTTGGGCTAGTCTAAACCAAACAACTGAGAATAA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCAATCCTGAACGTTTaGAAGAAAATCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISASILNV*KKIQTH
Trigger: GTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSASLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSARWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSACVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKCRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
CDS-3UTR GCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGTCACATC +
Preference number: 4 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCLWAFF*AFSSHI
Trigger: GATGTGACTACTAAAAGCGCAAAAGAAGGCCCAGAG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTTATTCTCAGTTGTTTaGTTTAGACTAGCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISALFSVV*FRLAQN
Trigger: GTTTTGGGCTAGTCTAAACCAAACAACTGAGAATAA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSARCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTATAATCCTCCAGTTTaGGCTTCTTTTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISYNPPV*ASFSRC
Trigger: ACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSALLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp GTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTaGAATCTGAGTCATCAGATCCTGCAGTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VKNRLLHKVTSS*NLSHQILQFFF
Trigger: AAAGAAAAACTGCAGGATCTGATGACTCAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTTTTATAGCTCTAAGTaGACCAGCAGCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKFYSSK*TSSFLN
Trigger: GTTCAAGAAGCTGCTGGTTCACTTAGAGCTATAAAA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 4 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCGAAAATTTTGACCCATaGTACAACATGAATGAACCC +
Preference number: 4 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCENFDP*YNMNEP
Trigger: GGGTTCATTCATGTTGTAGCATGGGTCAAAATTTTC...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSATFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp CTTCCAAATATCATATGCAAAGATCTTACCAGTCTCTaGAGAATGGACAGTTTGTTCTACATGTATAGATGG +
Preference number: 4 (lower is better)
Translates to: LPNIICKDLTSL*RMDSLFYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS CCA 90 bp GGGCCCGCCTTCCAAAGCCTGGGGGAGGCAGGAGCGCTGCGGAGGTaGACCGGCGCCACCCCGCACTCGCGTCTCCTCCTCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: GPAFQSLGEAGALRR*TGATPHSRLLLLSP
Trigger: AGGAGACAGGAGGAGGAGACGCGAGTGCGGGGTGGCGCCGGTCCACCTCCGCAGCGCTCCTGCCTCCCCCAGGCTTTGGAAGGCGGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540436.5
ENST00000541765.5
CDS GCA 90 bp GAGCTCATTCTAGCGAGCCCTTCCCGTGCCCTAATCAGTGGCCCTTaGGCACTTACGTATCCGTCTCTCGACCTCCAAGCACCCGAGGTA +
Preference number: 5 (lower is better)
Translates to: ELILASPSRALISGP*ALTYPSLDLQAPEV
Trigger: TACCTCGGGTGCTTGGAGGTCGAGAGACGGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGAATGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR CAA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTTGCCTGGGGGAATaGCTGCCTCAGGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTACLGE*LPQESL
Trigger: CAGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGCTTGCCTGGGGGAATaGCTGCCTCAGGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCACLGE*LPQESL
Trigger: CAGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGCTTGCCTGGGGGAATaGCTGCCTCAGGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VPGARLEVLAAEKATRICACLGE*LPQESL
Trigger: CAGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVSEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGTTCACTTGGGGCTaGGCTGACTTCATATTCCCC +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSWFTWG*ADFIFP
Trigger: GGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACCA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACACCCTGCTCTCGAATTaGCTCGTGGACCACCAGATG +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHTLLSN*LVDHQM
Trigger: CATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRSEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLSEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCSEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS CCA 90 bp AGTTTAAGAGCTCATTCTAGCGAGCCCTTCCCGTGCCCTAATCAGTaGCCCTTGCGCACTTACGTATCCGTCTCTCGACCTCCAAGCACC +
Preference number: 5 (lower is better)
Translates to: SLRAHSSEPFPCPNQ*PLRTYVSVSRPPST
Trigger: GGTGCTTGGAGGTCGAGAGACGGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGAATGAGCTCTTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATGGTTCACTTGGGGCTaGGCTGACTTCATATTCCCC +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPWFTWG*ADFIFP
Trigger: GGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACCA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTACCCTGCTCTCGAATTaGCTCGTGGACCACCAGATG +
Preference number: 5 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLTLLSN*LVDHQM
Trigger: CATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGCTTGCCTGGGGGAATaGCTGCCTGTAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: KVPGARLEVLAAEKATRIACLGE*LPVTAL
Trigger: AAGAGCCGTTACAGGCAGCAATTCCCCCAGGCAAGC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS-3UTR CAA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPIGLIR*GRRCSR
Trigger: TCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTAT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: KVPGARLEVLAAEKATRIWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSSYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: WSKVPGARLEVLAAEKATSEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVLPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPLPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS GCA 90 bp TTACACCCAACCAGTTTAAGAGCTCATTCTAGCGAGCCCTTCCCGTaGCCTAATCAGTGGCCCTTGCGCACTTACGTATCCGTCTCTCGA +
Preference number: 5 (lower is better)
Translates to: LHPTSLRAHSSEPFP*PNQWPLRTYVSVSR
Trigger: TCGAGAGACGGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGAATGAGCTCTTAAACTGGTTGGGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLIGLIR*GRRCSR
Trigger: TCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTAT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAIGLIR*GRRCSR
Trigger: TCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTAT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KVPGARLEVLAAEKATRIWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCACTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGGCTTAGGCACATCTTaGGGTTCTGTGTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTGLGTS*GSVFNF
Trigger: GAAGTTGAACACAGAACCCAAAGATGTGCCTAAGCC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCTGGAAATTATCCCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHLEIIP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGGATAATTTCCAG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVLPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS GCA 90 bp CGATTGCTCTGGGGCCTACAAGGCAATCCATCACTACTGGACATTTaGAGACAGGTACTCTCTCAACCTGCAGGAACCCCGCGTTTATTC +
Preference number: 5 (lower is better)
Translates to: RLLWGLQGNPSLLDI*RQVLSQPAGTPRLF
Trigger: GAATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGCCTTGTAGGCCCCAGAGCAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCATCACTACTGGACATTaGCAGACAGGTACTCTCTCA +
Preference number: 5 (lower is better)
Translates to: VPGARLEVLAAEKATRICITTGH*QTGTLS
Trigger: TGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGAT...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACATCACTACTGGACATTaGCAGACAGGTACTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHITTGH*QTGTLS
Trigger: TGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGAT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAAAGAGTTGCACCATaGAAACAGATGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTKRVAP*KQMRLK
Trigger: CTTCAGCCTCATCTGTTTCAATGGTGCAACTCTTTT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 5 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPPFKPP*KSFCTC
Trigger: GCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: EASEDGCLPGGIAASGVSICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: HKLLPCADVTISGLPGRAGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTGGCTTAGGCACATCTTaGGGTTCTGTGTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCGLGTS*GSVFNF
Trigger: GAAGTTGAACACAGAACCCAAAGATGTGCCTAAGCC...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: QYGGCWICHWHIHRGHATKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 5 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTGGAAATTATCCCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPLEIIP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGGATAATTTCCAG...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VSLEELKNCMIASSFMVWSEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: KVPGARLEVLAAEKATRILPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATACTGTCTGCATGGCTaGAAAGGGTGCTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESYCLHG*KGCCVN
Trigger: ATTAACACAGCACCCTTTCAAGCCATGCAGACAGTA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTACTGTCTGCATGGCTaGAAAGGGTGCTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPYCLHG*KGCCVN
Trigger: ATTAACACAGCACCCTTTCAAGCCATGCAGACAGTA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTACTGTCTGCATGGCTaGAAAGGGTGCTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHYCLHG*KGCCVN
Trigger: ATTAACACAGCACCCTTTCAAGCCATGCAGACAGTA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGTTTCCAAACACCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESCFQTP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGTGTTTGGAAACA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433722.6
CDS TCA 90 bp TTTCCACACCGGGACCTAAGGCTGAGCCACTCAAACCTCTTTACATaGTCCCTCACCACCAGCCCTAACCTCAATCCTGAACGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FPHRDLRLSHSNLFT*SLTTSPNLNPERLE
Trigger: TTCCAAACGTTCAGGATTGAGGTTAGGGCTGGTGGTGAGGGATCATGTAAAGAGGTTTGAGTGGCTCAGCCTTAGGTCCCGGTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS CCA 90 bp CCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCAGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: PTTSTSSNRSPAIDK*LSRSGKHIRLCSLL
Trigger: CAAGAGACTGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS-3UTR CAA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTCCTAATCAGTGGCCCTaGCGCACTTACGTATCCGTC +
Preference number: 5 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAPNQWP*RTYVSV
Trigger: GACGGATACGTAAGTGCGCAAGGGCCACTGATTAGG...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCTCAATCCTGAACGTTaGGAAGAAAATCCAAACTCA +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTLNPER*EENPNS
Trigger: TGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGAG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CAA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATIGLIR*GRRCSR
Trigger: TCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTAT...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSPFKPP*KSFCTC
Trigger: GCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGG...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHPFKPP*KSFCTC
Trigger: GCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: QYGGCWICHWHIHRGHATKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: LVSLEELKNCMIASSFMVGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGGCTTAGGCACATCTTaGGGTTCTGTGTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRGLGTS*GSVFNF
Trigger: GAAGTTGAACACAGAACCCAAAGATGTGCCTAAGCC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: GCWICHWHIHRGHATGVSTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 5 (lower is better)
Translates to: VPGARLEVLAAEKATRICLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 5 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: YFHKLLPCADVTISGLPGATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTTGCTGTCCATTCAATaGGCTGTCCCTCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWLLSIQ*AVPLSL
Trigger: AAGACTTAGAGGGACAGCCAATTGAATGGACAGCAA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTACACAACAGTTTGGTaGTACTTAATGCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHYTTVW*YLMPQN
Trigger: GTTCTGTGGCATTAAGTACAACCAAACTGTTGTGTA...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS GCA 90 bp TATTTTTGGTTATCACAACTTGGGAGGGGGAAGGGAGGTGAAGAGTaGTACCGGTATCTTGTGGTTAGAGGCCAGGGATGCTGCCAAACA +
Preference number: 5 (lower is better)
Translates to: YFWLSQLGRGKGGEE*YRYLVVRGQGCCQT
Trigger: TGTTTGGCAGCATCCCTGGCCTCTAACCACAAGATACCGGTAGCACTCTTCACCTCCCTTCCCCCTCCCAAGTTGTGATAACCAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543380.5
CDS CCA 90 bp CAACTCACATCTTTGGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTaGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTT +
Preference number: 5 (lower is better)
Translates to: QLTSLGSVFNFLGSS*SFGMRLAVATPQDF
Trigger: AAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATGTGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553026.5
CDS-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 5 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: KVPGARLEVLAAEKATRILLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHLEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: VTGTSTGVMLRESPCPESLEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTLEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTGGCTTAGGCACATCTTaGGGTTCTGTGTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: WSKVPGARLEVLAAEKATGLGTS*GSVFNF
Trigger: GAAGTTGAACACAGAACCCAAAGATGTGCCTAAGCC...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: QYGGCWICHWHIHRGHATVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACATCAGGATGATAATTaGCAGTCTCTTGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: TGTSTGVMLRESPCPESPHQDDN*QSLENG
Trigger: TCCATTCTCAAGAGACTGCAAATTATCATCCTGATG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
CDS-3UTR CAA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACTGGAAATTATCCCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLEIIP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGGATAATTTCCAG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTACCCTGCTCTCGAATTaGCTCGTGGACCACCAGATG +
Preference number: 5 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLTLLSN*LVDHQM
Trigger: CATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGT...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 5 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTATTTGCTGCAGTCTCTaGAGAATGGACAGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVICCSL*RMDSLF
Trigger: GAACAAACTGTCCATTCTCAAGAGACTGCAGCAAAT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAAAAAGAGTTGCACCATaGAAACAGATGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRKRVAP*KQMRLK
Trigger: CTTCAGCCTCATCTGTTTCAATGGTGCAACTCTTTT...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: LVSLEELKNCMIASSFMVKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRLEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: VSLEELKNCMIASSFMVWALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: SLEELKNCMIASSFMVWSALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LVSLEELKNCMIASSFMVMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SYFHKLLPCADVTISGLPMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LVSLEELKNCMIASSFMVTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTACTGTCTGCATGGCTaGAAAGGGTGCTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLYCLHG*KGCCVN
Trigger: ATTAACACAGCACCCTTTCAAGCCATGCAGACAGTA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGATCCTTCAAGTGTTaGTCTCAGACTTTCATTTCT +
Preference number: 5 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVRSFKC*SQTFIS
Trigger: AGAAATGAAAGTCTGAGACAAACACTTGAAGGATCT...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCCTAATCAGTGGCCCTaGCGCACTTACGTATCCGTC +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISAPNQWP*RTYVSV
Trigger: GACGGATACGTAAGTGCGCAAGGGCCACTGATTAGG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCTCAATCCTGAACGTTaGGAAGAAAATCCAAACTCA +
Preference number: 5 (lower is better)
Translates to: KVPGARLEVLAAEKATRILNPER*EENPNS
Trigger: TGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGAG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CAA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTAAAAGAGTTGCACCATaGAAACAGATGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: WSKVPGARLEVLAAEKATKRVAP*KQMRLK
Trigger: CTTCAGCCTCATCTGTTTCAATGGTGCAACTCTTTT...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTGGTTCACTTGGGGCTaGGCTGACTTCATATTCCCC +
Preference number: 5 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFWFTWG*ADFIFP
Trigger: GGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACCA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: YFHKLLPCADVTISGLPGGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISAGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCGGCTTAGGCACATCTTaGGGTTCTGTGTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPGLGTS*GSVFNF
Trigger: GAAGTTGAACACAGAACCCAAAGATGTGCCTAAGCC...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: SYFHKLLPCADVTISGLPKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: WQYGGCWICHWHIHRGHALRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: SLEELKNCMIASSFMVWSSYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCGTCTGTGCAGTCTCTaGAGAATGGACAGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SYFHKLLPCADVTISGLPRLCSL*RMDSLF
Trigger: GAACAAACTGTCCATTCTCAAGAGACTGCACAGACG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS-3UTR CAA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTAGATCCTTCAAGTGTTaGTCTCAGACTTTCATTTCT +
Preference number: 5 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCRSFKC*SQTFIS
Trigger: AGAAATGAAAGTCTGAGACAAACACTTGAAGGATCT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGAATTTCAAATCTCAATaGCTGAGGATGCATACCAGT +
Preference number: 5 (lower is better)
Translates to: CWICHWHIHRGHATGVSLNFKSQ*LRMHTS
Trigger: ACTGGTATGCATCCTCAGCAATTGAGATTTGAAATT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGCTACCTCTTCATCACTaGATTAGCCAAGTACTCAGA +
Preference number: 5 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLLPLHH*ISQVLR
Trigger: TCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTAG...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS CCA 90 bp GTACTCTCTCAACCTGCAGGAACCCCGCGTTTATTCTCAGTTGTTTaGTTTAGACTAGCCCAAAACCGCTTACACCCAACCAGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VLSQPAGTPRLFSVV*FRLAQNRLHPTSLR
Trigger: TCTTAAACTGGTTGGGTGTAAGCGGTTTTGGGCTAGTCTAAACCAAACAACTGAGAATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CAA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCCCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 5 (lower is better)
Translates to: LVSLEELKNCMIASSFMVPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 5 (lower is better)
Translates to: SYFHKLLPCADVTISGLPPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: YFHKLLPCADVTISGLPGLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: ISSYFHKLLPCADVTISGKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGLRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 5 (lower is better)
Translates to: SLEELKNCMIASSFMVWSRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCCTGGAAATTATCCCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPLEIIP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGGATAATTTCCAG...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: EELKNCMIASSFMVWSTISYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: LMVTELLLAGGDWKPCSESYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: ISSYFHKLLPCADVTISGLPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS CCA 90 bp GCCTACACTTACAGAAGCAGAATGATACAGATCAACTCACATCTTTaGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTGGTCATTTGGTA +
Preference number: 5 (lower is better)
Translates to: AYTYRSRMIQINSHL*VLCSTSWAAAGHLV
Trigger: TACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATGTGAGTTGATCTGTATCATTCTGCTTCTGTAAGTGTAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553026.5
CDS-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCAAAAGAGTTGCACCATaGAAACAGATGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPKRVAP*KQMRLK
Trigger: CTTCAGCCTCATCTGTTTCAATGGTGCAACTCTTTT...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTCCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLPFKPP*KSFCTC
Trigger: GCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGG...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: YFHKLLPCADVTISGLPGSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: WSKVPGARLEVLAAEKATLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SLEELKNCMIASSFMVWSKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: LVSLEELKNCMIASSFMVATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTCTGGAAATTATCCCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFLEIIP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGGATAATTTCCAG...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 5 (lower is better)
Translates to: VSLEELKNCMIASSFMVWIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTGCTTGCCTGGGGGAATaGCTGCCTCAGGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCACLGE*LPQESL
Trigger: CAGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGC...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS GCA 90 bp GCTTTCTCACTACCTTCCAAAAGGTCCCAAAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACACTCAGACTTTCATTTCTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: AFSLPSKRSQKYKDD*SIWSSTLRLSFLSG
Trigger: CCCTGAAAGAAATGAAAGTCTGAGTGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAGTGAGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000537108.5
CDS-3UTR CAA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: ISSYFHKLLPCADVTISGESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: GCISGWANSIRDSDSLTDESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: YFHKLLPCADVTISGLPGTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCATCAGGATGATAATTaGCAGTCTCTTGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: SYFHKLLPCADVTISGLPHQDDN*QSLENG
Trigger: TCCATTCTCAAGAGACTGCAAATTATCATCCTGATG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433722.6
ENST00000454014.6
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: EELKNCMIASSFMVWSTISFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS TCA 90 bp CACTGCTTTCTCACTACCTTCCAAAAGGTCCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTCAACACTCAGACTTTCATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HCFLTTFQKVPKVQG*LLHLVFNTQTFISF
Trigger: GAAAGAAATGAAAGTCTGAGTGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAGTGAGAAAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000537108.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTGGTTCACTTGGGGCTaGGCTGACTTCATATTCCCC +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCWFTWG*ADFIFP
Trigger: GGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACCA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGGTTCACTTGGGGCTaGGCTGACTTCATATTCCCC +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAWFTWG*ADFIFP
Trigger: GGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACCA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: EELKNCMIASSFMVWSTITLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 5 (lower is better)
Translates to: VATPQDFGEICDCDVKECLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: VSLEELKNCMIASSFMVWLRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: GCISGWANSIRDSDSLTDATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGACCCTGCTCTCGAATTaGCTCGTGGACCACCAGATG +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKTLLSN*LVDHQM
Trigger: CATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTACTGTCTGCATGGCTaGAAAGGGTGCTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISAYCLHG*KGCCVN
Trigger: ATTAACACAGCACCCTTTCAAGCCATGCAGACAGTA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGATCCTTCAAGTGTTaGTCTCAGACTTTCATTTCT +
Preference number: 5 (lower is better)
Translates to: YFHKLLPCADVTISGLPGRSFKC*SQTFIS
Trigger: AGAAATGAAAGTCTGAGACAAACACTTGAAGGATCT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGACAGCTGTGAGTTACTaGGTAACAATCACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLTAVSY*VTITSS
Trigger: GGAAGAAGTGATTGTTACCAAGTAACTCACAGCTGT...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp AGGCAAATACACTGCACCATTCAAACCCCCTTTGAAGTCTTTTTGTACGTGCTCATACCAGTATTTGCTTaGCACAGCTTGCTGACTAAG +
Preference number: 5 (lower is better)
Translates to: RQIHCTIQTPFEVFLYVLIPVFA*HSLLTK
Trigger: CTTAGTCAGCAAGCTGTGCAAAGCAAATACTGGTAT...GAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGTATTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGAATGCTCAATTCATTaGCTCCGACTTCAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: SYFHKLLPCADVTISGLPECSIH*LRLQLK
Trigger: TTTTAACTGAAGTCGGAGCAAATGAATTGAGCATTC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAIGLIR*GRRCSR
Trigger: TCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTAT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGATCAAACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: RSNTIGWSKVPGARLEVLFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISASVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: EELKNCMIASSFMVWSTILRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGGCTTAGGCACATCTTaGGGTTCTGTGTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISGLGTS*GSVFNF
Trigger: GAAGTTGAACACAGAACCCAAAGATGTGCCTAAGCC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: VATPQDFGEICDCDVKECIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATCATCAGGATGATAATTaGCAGTCTCTTGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: GCISGWANSIRDSDSLTDHQDDN*QSLENG
Trigger: TCCATTCTCAAGAGACTGCAAATTATCATCCTGATG...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISAIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAACAGACTTCCTAGACTaGCTGTCCATTCAATTGGCT +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGTDFLD*LSIQLA
Trigger: AGCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAAAAAGAGTTGCACCATaGAAACAGATGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGKRVAP*KQMRLK
Trigger: CTTCAGCCTCATCTGTTTCAATGGTGCAACTCTTTT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISPFKPP*KSFCTC
Trigger: GCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGCCATTCAAACCCCCTTaGAAGTCTTTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKPFKPP*KSFCTC
Trigger: GCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGG...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 5 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: HSLTSEATSQFIKCQISAFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWLEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSASYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTACTGTCTGCATGGCTaGAAAGGGTGCTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKYCLHG*KGCCVN
Trigger: ATTAACACAGCACCCTTTCAAGCCATGCAGACAGTA...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS TCA 90 bp CATTACCACGACACCTTATTTATGCCTACACTTACAGAAGCAGAATaGTACAGATCAACTCACATCTTTGGGTTCTGTGTTCAACTTCCT +
Preference number: 5 (lower is better)
Translates to: HYHDTLFMPTLTEAE*YRSTHIFGFCVQLP
Trigger: AGGAAGTTGAACACAGAACCCAAAGATGTGAGTTGATCTGTATCATTCTGCTTCTGTAAGTGTAGGCATAAATAAGGTGTCGTGGTAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553026.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCATCACTACTGGACATTaGCAGACAGGTACTCTCTCA +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCITTGH*QTGTLS
Trigger: TGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGAT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp TTTGAAGTCTTTTTGTACGTGCTCCTGTGTCAAGTTCTGCAATACATACTGAACTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FEVFLYVLLCQVLQYILNSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...GTTCAGTATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACATCAGGATGATAATTaGCAGTCTCTTGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGHQDDN*QSLENG
Trigger: TCCATTCTCAAGAGACTGCAAATTATCATCCTGATG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000433722.6
ENST00000454014.6
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSALLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGCTGGAAATTATCCCTTaGGGAATAAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKLEIIP*GIRCSR
Trigger: TCTGGAGCACCTTATTCCCAAAGGGATAATTTCCAG...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSASFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGATCTTACCAGTCTCTaGAGAATGGACAGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSADLTSL*RMDSLF
Trigger: GAACAAACTGTCCATTCTCAAGAGACTGGTAAGATC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCTCAATCCTGAACGTTaGGAAGAAAATCCAAACTCA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSALNPER*EENPNS
Trigger: TGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGAG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSALEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSAGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCATCAGGATGATAATTaGCTGCAGTCTCTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCHQDDN*LQSLEN
Trigger: ATTCTCAAGAGACTGCAGCAAATTATCATCCTGATG...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSALRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp ACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: TIYIHSLTSEATSQFIKCLRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...GCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CAA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: EATSQFIKCQISANCHSALRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS GCA 72 bp CCCCTCTCTTTCCTCCCGGTCCTCGCCCGCGGCCTCTaGGGCGCCAGAGACCCAGCCGACTCAGCCGCTCGC +
Preference number: 6 (lower is better)
Translates to: PLSFLPVLARGL*GARDPADSAAR
Trigger: GCGAGCGGCTGAGTCGGCTGGGTCTCTGGCGCCGCAGAGGCCGCGGGCGAGGACCGGGAGGAAAGAGAGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537108.5
CDS TCA 72 bp CGCCAGCGCGCACCCCCTCAAGTCTCCGGGGGAGCCTaGGCGAAGAGCACCTCTCCCGAGCGGCCACGGAGA +
Preference number: 6 (lower is better)
Translates to: RQRAPPQVSGGA*AKSTSPERPRR
Trigger: TCTCCGTGGCCGCTCGGGAGAGGTGCTCTTCGCTCAGGCTCCCCCGGAGACTTGAGGGGGTGCGCGCTGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS CCA 72 bp TTCCAAAGCCTGGGGGAGGCAGGAGCGCTGCGGAGGTaGACCGGCGCCACCCCGCACTCGCGTCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: FQSLGEAGALRR*TGATPHSRLLL
Trigger: GAGGAGGAGACGCGAGTGCGGGGTGGCGCCGGTCCACCTCCGCAGCGCTCCTGCCTCCCCCAGGCTTTGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540436.5
ENST00000541765.5
CDS CCA 72 bp GCTGACTTCATATTCCCCTCTCTTTCCTCCTCTGAATaGCCTGAAGGTGACCTCGCCGGGTCAGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: ADFIFPSLSSSE*PEGDLAGSAAS
Trigger: GGAGGCGGCTGACCCGGCGAGGTCACCTTCAGGCCATTCAGAGGAGGAAAGAGAGGGGAATATGAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540584.1
CDS CAA 72 bp TCTAGCGAGCCCTTCCCGTGCCCTAATCAGTGGCCCTaGCGCACTTACGTATCCGTCTCTCGACCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: SSEPFPCPNQWP*RTYVSVSRPPS
Trigger: GCTTGGAGGTCGAGAGACGGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS CAA 90 bp AGAGCTCATTCTAGCGAGCCCTTCCCGTGCCCTAATCAGTGGCCCTaGCGCACTTACGTATCCGTCTCTCGACCTCCAAGCACCCGAGGT +
Preference number: 6 (lower is better)
Translates to: RAHSSEPFPCPNQWP*RTYVSVSRPPSTRG
Trigger: ACCTCGGGTGCTTGGAGGTCGAGAGACGGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGAATGAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS CCA 72 bp GCTCATTCTAGCGAGCCCTTCCCGTGCCCTAATCAGTaGCCCTTGCGCACTTACGTATCCGTCTCTCGACCT +
Preference number: 6 (lower is better)
Translates to: AHSSEPFPCPNQ*PLRTYVSVSRP
Trigger: AGGTCGAGAGACGGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGAATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS CAA 72 bp GGAGGGGGAAGGGAGGTGAAGAGTGCTACCGGTATCTaGTGGTTAGAGGCCAGGGATGCTGCCAAACATCTT +
Preference number: 6 (lower is better)
Translates to: GGGREVKSATGI*WLEARDAAKHL
Trigger: AAGATGTTTGGCAGCATCCCTGGCCTCTAACCACAAGATACCGGTAGCACTCTTCACCTCCCTTCCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543380.5
CDS GCA 72 bp ACCAGTTTAAGAGCTCATTCTAGCGAGCCCTTCCCGTaGCCTAATCAGTGGCCCTTGCGCACTTACGTATCC +
Preference number: 6 (lower is better)
Translates to: TSLRAHSSEPFP*PNQWPLRTYVS
Trigger: GGATACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCTAGAATGAGCTCTTAAACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS GCA 72 bp TGGGGCCTACAAGGCAATCCATCACTACTGGACATTTaGAGACAGGTACTCTCTCAACCTGCAGGAACCCCG +
Preference number: 6 (lower is better)
Translates to: WGLQGNPSLLDI*RQVLSQPAGTP
Trigger: CGGGGTTCCTGCAGGTTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGCCTTGTAGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS GCA 72 bp TTATCACAACTTGGGAGGGGGAAGGGAGGTGAAGAGTaGTACCGGTATCTTGTGGTTAGAGGCCAGGGATGC +
Preference number: 6 (lower is better)
Translates to: LSQLGRGKGGEE*YRYLVVRGQGC
Trigger: GCATCCCTGGCCTCTAACCACAAGATACCGGTAGCACTCTTCACCTCCCTTCCCCCTCCCAAGTTGTGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543380.5
CDS CAA 72 bp CTGGGGCCTACAAGGCAATCCATCACTACTGGACATTaGCAGACAGGTACTCTCTCAACCTGCAGGAACCCC +
Preference number: 6 (lower is better)
Translates to: LGPTRQSITTGH*QTGTLSTCRNP
Trigger: GGGGTTCCTGCAGGTTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGCCTTGTAGGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS TCA 72 bp CGGGACCTAAGGCTGAGCCACTCAAACCTCTTTACATaGTCCCTCACCACCAGCCCTAACCTCAATCCTGAA +
Preference number: 6 (lower is better)
Translates to: RDLRLSHSNLFT*SLTTSPNLNPE
Trigger: TTCAGGATTGAGGTTAGGGCTGGTGGTGAGGGATCATGTAAAGAGGTTTGAGTGGCTCAGCCTTAGGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS CCA 72 bp GGGGGAAGGGAGGTGAAGAGTGCTACCGGTATCTTGTaGTTAGAGGCCAGGGATGCTGCCAAACATCTTAAA +
Preference number: 6 (lower is better)
Translates to: GGREVKSATGIL*LEARDAAKHLK
Trigger: TTTAAGATGTTTGGCAGCATCCCTGGCCTCTAACCACAAGATACCGGTAGCACTCTTCACCTCCCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543380.5
CDS CAA 90 bp CCGATTGCTCTGGGGCCTACAAGGCAATCCATCACTACTGGACATTaGCAGACAGGTACTCTCTCAACCTGCAGGAACCCCGCGTTTATT +
Preference number: 6 (lower is better)
Translates to: PIALGPTRQSITTGH*QTGTLSTCRNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGCCTTGTAGGCCCCAGAGCAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS TCA 72 bp CATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTaGGTAGGTCTGGGAAACACATTCGTCTGTGCAGTC +
Preference number: 6 (lower is better)
Translates to: HPLTDPRLLTNG*VGLGNTFVCAV
Trigger: GACTGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS GCA 72 bp AGCAGCTTCTTGAACAAGAATGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCAATCCATCACTACTGG +
Preference number: 6 (lower is better)
Translates to: SSFLNKNANFPD*SGAYKAIHHYW
Trigger: CCAGTAGTGATGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGCATTCTTGTTCAAGAAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS CCA 72 bp CAACCTGCAGGAACCCCGCGTTTATTCTCAGTTGTTTaGTTTAGACTAGCCCAAAACCGCTTACACCCAACC +
Preference number: 6 (lower is better)
Translates to: QPAGTPRLFSVV*FRLAQNRLHPT
Trigger: GGTTGGGTGTAAGCGGTTTTGGGCTAGTCTAAACCAAACAACTGAGAATAAACGCGGGGTTCCTGCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS CAA 72 bp CTGGCAATATCTAGGGATATTTTTGGTTATCACAACTaGGGAGGGGGAAGGGAGGTGAAGAGTGCTACCGGT +
Preference number: 6 (lower is better)
Translates to: LAISRDIFGYHN*GGGREVKSATG
Trigger: ACCGGTAGCACTCTTCACCTCCCTTCCCCCTCCCAAGTTGTGATAACCAAAAATATCCCTAGATATTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543380.5
CDS CAA 90 bp GTGTTTAAGGCATATGAGTCCATTTTCAATATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGAACTCAGAGTAGACTGCAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: VFKAYESIFNIGLIR*GRRCSRTQSRLQGA
Trigger: AGCCCCCTGCAGTCTACTCTGAGTTCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTATATTGAAAATGGACTCATATGCCTTAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537108.5
ENST00000537553.5
ENST00000540436.5
ENST00000540584.1
ENST00000542550.5
CDS CAA 90 bp TCTGGGAAACACATTCGTCTGTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: SGKHIRLCSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCACAGACGAATGTGTTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS GCA 72 bp ACTACTGGACATTTGCAGACAGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATTCTCAGTTGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: TTGHLQTGTLST*RNPAFILSCLV
Trigger: AACCAAACAACTGAGAATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS CAA 72 bp CACATTCGTCTGTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGG +
Preference number: 6 (lower is better)
Translates to: HIRLCSLLRMDS*FYMYRWQLALG
Trigger: CCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCACAGACGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395805.6
CDS CAA 90 bp TGCCTACACTTACAGAAGCAGAATGATACAGATCAACTCACATCTTaGGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTGGTCATTTGGT +
Preference number: 6 (lower is better)
Translates to: CLHLQKQNDTDQLTS*GSVFNFLGSSWSFG
Trigger: ACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATGTGAGTTGATCTGTATCATTCTGCTTCTGTAAGTGTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553026.5
CDS TCA 72 bp CTCACTACCTTCCAAAAGGTCCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTCAACACTCAGACTTTC +
Preference number: 6 (lower is better)
Translates to: LTTFQKVPKVQG*LLHLVFNTQTF
Trigger: GAAAGTCTGAGTGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000537108.5
CDS CCA 72 bp TACAGAAGCAGAATGATACAGATCAACTCACATCTTTaGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: YRSRMIQINSHL*VLCSTSWAAAG
Trigger: ACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATGTGAGTTGATCTGTATCATTCTGCTTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553026.5
CDS TCA 72 bp CTCCACTTTTCAGGCGATCCTTATAATCCTCCAGTTTaGGCTACTAAATCATGTGTCCCCAACACAGTAGCT +
Preference number: 6 (lower is better)
Translates to: LHFSGDPYNPPV*ATKSCVPNTVA
Trigger: AGCTACTGTGTTGGGGACACATGATTTAGTAGCTCAAACTGGAGGATTATAAGGATCGCCTGAAAAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543380.5
CDS CAA 72 bp GCATATGAGTCCATTTTCAATATAGGTCTCATACGCTaGGGAAGGAGATGCAGCAGAACTCAGAGTAGACTG +
Preference number: 6 (lower is better)
Translates to: AYESIFNIGLIR*GRRCSRTQSRL
Trigger: CAGTCTACTCTGAGTTCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTATATTGAAAATGGACTCATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537108.5
ENST00000537553.5
ENST00000540436.5
ENST00000540584.1
ENST00000542550.5
CDS CCA 72 bp CGTCTGTTAAGAAACTCTTGTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGACTCTCAGACTTTCATT +
Preference number: 6 (lower is better)
Translates to: RLLRNSCGCISG*ANSIRDSQTFI
Trigger: AATGAAAGTCTGAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTTAACAGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538387.1
CDS CAA 72 bp TCCCTCACCACCAGCCCTAACCTCAATCCTGAACGTTaGGAAGAAAATCCAAACTCACAACATTCTTTTATA +
Preference number: 6 (lower is better)
Translates to: SLTTSPNLNPER*EENPNSQHSFI
Trigger: TATAAAAGAATGTTGTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGAGGTTAGGGCTGGTGGTGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS CAA 72 bp GTGCTCCTGTGTCAAGTTCTGCAATACATACTGAACTaGAAGTATAGTTCGAAGCTTTTTCTTCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: VLLCQVLQYILN*KYSSKLFLLSL
Trigger: GAGGCTGAGAAGAAAAAGCTTCGAACTATACTTCAAGTTCAGTATGTATTGCAGAACTTGACACAGGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000534897.5
ENST00000537108.5
ENST00000537553.5
ENST00000541765.5
ENST00000542550.5
ENST00000543380.5
ENST00000546129.1
ENST00000548676.5