RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPRIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000110888

Ensembl transcript IDs: ENST00000298892.9, ENST00000395805.6, ENST00000417045.5, ENST00000433722.6, ENST00000454014.6, ENST00000534897.5, ENST00000537108.5, ENST00000537553.5, ENST00000538387.1, ENST00000540436.5, ENST00000540584.1, ENST00000541765.5, ENST00000542550.5, ENST00000543380.5, ENST00000546129.1, ENST00000548676.5, ENST00000553026.5

Found 1429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTC +
Preference number: 1 (lower is better)
Translates to: LLRQRVDVYWQYGGC*ICHWHIHRGHATGV
Trigger: GACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp CATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGA +
Preference number: 1 (lower is better)
Translates to: HLLRQRVDVYWQYGG*WICHWHIHRGHATG
Trigger: TCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp CTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTAC +
Preference number: 1 (lower is better)
Translates to: LASAEAEGRRVLAVW*LLDLSLAHPQGSCY
Trigger: GTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGC +
Preference number: 1 (lower is better)
Translates to: QLASAEAEGRRVLAV*WLLDLSLAHPQGSC
Trigger: GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp CCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCTGGGGAGGAGAAATGCAGCATCAGC +
Preference number: 1 (lower is better)
Translates to: PLPWEDLEKLVKTVA*LGELLPGEEKCSIS
Trigger: GCTGATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 90 bp GAGCCCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCTGCCTGGGGAGGAGAAATGCAGCAT +
Preference number: 1 (lower is better)
Translates to: EPFAMGGFGEASEDG*LPGGIAAWGGEMQH
Trigger: ATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 90 bp AGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGA +
Preference number: 1 (lower is better)
Translates to: RVDVYWQYGGCWICH*HIHRGHATGVSLSR
Trigger: TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp GAGCCCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGAGGTCATA +
Preference number: 1 (lower is better)
Translates to: EPFAMGGFGEASEDG*LPGGIAASGVSEVI
Trigger: TATGACCTCAGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR CCA 90 bp CCCTGCTTTGGATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAG +
Preference number: 1 (lower is better)
Translates to: PCFGFRCILLPLARR*LGFGDLLLLLLFRQ
Trigger: CTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp TTGGAGTCTCTGGCTGTTTTGAATCCTGTTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: LESLAVLNPVLHTWE*SMTWWCSVRSAWKV
Trigger: CACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp TTAGGCACATCTTTGGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTaGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTT +
Preference number: 1 (lower is better)
Translates to: LGTSLGSVFNFLGSS*SFGMRLAVATPQDF
Trigger: AAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATGTGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp GGTGCTGTGTTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGATTTGGAGAA +
Preference number: 1 (lower is better)
Translates to: GAVLMVTELLLAGGD*KPCSEPFAMGGFGE
Trigger: TTCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp CCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAA +
Preference number: 1 (lower is better)
Translates to: PTTSTSSNRSPAIDK*LSRSGKHIRLCWVK
Trigger: TTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp TGTTTCCTCTGTTCTAAGGAAACTGCAGGCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAGGACTTAAAGGACTCCTGTTTCTTC +
Preference number: 1 (lower is better)
Translates to: CFLCSKETAGLDTSW*LPEASQDLKDSCFF
Trigger: GAAGAAACAGGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp TCACACATGGGAGTGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCT +
Preference number: 1 (lower is better)
Translates to: SHMGVVHDLVVFCSL*MEGVQDFGVCFFGS
Trigger: AGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp TCTTGTTTCCTCTGTTCTAAGGAAACTGCAGGCTTGGATACCTCCTaGTGCTTACCAGAAGCCTCCCAGGACTTAAAGGACTCCTGTTTC +
Preference number: 1 (lower is better)
Translates to: SCFLCSKETAGLDTS*CLPEASQDLKDSCF
Trigger: GAAACAGGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp GTTTTGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAG +
Preference number: 1 (lower is better)
Translates to: VLNPVLHTWEWSMTW*CSVRSAWKVSKTLE
Trigger: CTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp GCTGTTTTGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTG +
Preference number: 1 (lower is better)
Translates to: AVLNPVLHTWEWSMT*WCSVRSAWKVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp ATCTTTGGGTTCTGTGTTCAACTTCCTGGGCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAAT +
Preference number: 1 (lower is better)
Translates to: IFGFCVQLPGQQLVI*YEACCSYSPGLWRN
Trigger: ATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp ACATGGGAGTGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCTTGTT +
Preference number: 1 (lower is better)
Translates to: TWEWSMTWWCSVRSA*KVSKTLEFASLDLV
Trigger: AACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 90 bp ATTGCTAGCAGTTTCATGGTCTGGAGCACCATCATTGGCATAGGCTaGTACCAAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGG +
Preference number: 1 (lower is better)
Translates to: IASSFMVWSTIIGIG*YQDLFILHEVDIQW
Trigger: CCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAGACCATGAAACTGCTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp GCTATTGACAAATGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCTACCATTGCTTACTTGAATAGTTCC +
Preference number: 1 (lower is better)
Translates to: AIDKWLSRSGKHIRL*WVKGKATIAYLNSS
Trigger: GGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 90 bp GGAGTCTCTGAGGTCATAAACTCTGTTTCAGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAAGCATTTGAGCTACAAGTAACTGGA +
Preference number: 1 (lower is better)
Translates to: GVSEVINSVSDPEEA*SVVTKQAFELQVTG
Trigger: TCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATCTGAAACAGAGTTTATGACCTCAGAGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 90 bp ATTGACAAATGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACCATTGCTTACTTGAATAGTTCCATC +
Preference number: 1 (lower is better)
Translates to: IDKWLSRSGKHIRLC*VKGKATIAYLNSSI
Trigger: GATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 90 bp CCCTGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATaGCTAGGTCCCAGAATTCATATTACTACCTCTTCATCACTTGAT +
Preference number: 1 (lower is better)
Translates to: PCLSTVEGRTESGHL*LGPRIHITTSSSLD
Trigger: ATCAAGTGATGAAGAGGTAGTAATATGAATTCTGGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 90 bp AAAGTTTCTCCTAAGTTGTTCAGAAGAAGATCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: KVSPKLFRRRSNTIG*SKVPGARLEVLAAE
Trigger: CTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTTCTGAACAACTTAGGAGAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 90 bp TCAATTGCTGAGGATGCATACCAGTATTTGCTTTGCACAGCTTGCTaGCTAAGTGAAAGAGTCTTACCAATAATCAGTCTAACAGATGAG +
Preference number: 1 (lower is better)
Translates to: SIAEDAYQYLLCTAC*LSERVLPIISLTDE
Trigger: CTCATCTGTTAGACTGATTATTGGTAAGACTCTTTCACTTAGTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCATCCTCAGCAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 90 bp TCTATGCCTAGGTCCCAGAATTCATATTACTACCTCTTCATCACTTaGTTAGCCAAGTACTCAGAATGCTCAATTCATTTGCTCCGACTT +
Preference number: 1 (lower is better)
Translates to: SMPRSQNSYYYLFIT*LAKYSECSIHLLRL
Trigger: AAGTCGGAGCAAATGAATTGAGCATTCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTAGTAATATGAATTCTGGGACCTAGGCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 90 bp CTGTCCATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATaGAAAGATCTTACCAGTCTCTTGAGAATGGACAGTTTGTTCTAC +
Preference number: 1 (lower is better)
Translates to: LSIQLAVPLSLPNII*KDLTSLLRMDSLFY
Trigger: GTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAATGGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 90 bp ATACAAAAGAAATTAAGACAATTGGTCTTTTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTCAGATCCAGAAGAAGCCTGATCGGT +
Preference number: 1 (lower is better)
Translates to: IQKKLRQLVFYLRSL*GHKLCFRSRRSLIG
Trigger: ACCGATCAGGCTTCTTCTGGATCTGAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTAAAAGACCAATTGTCTTAATTTCTTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 90 bp AGGCATTGTAACTTGCCTGGACTTGAGGCAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGGATTAAGTGCAAACAATATACATTC +
Preference number: 1 (lower is better)
Translates to: RHCNLPGLEAVSLVS*TLIQLRIKCKQYTF
Trigger: GAATGTATATTGTTTGCACTTAATCCTTAACTGTATTAACGTTCAGCTTACTAAACTGACTGCCTCAAGTCCAGGCAAGTTACAATGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: EAEGRRVLAVWWLLD*SLAHPQGSCYGSLL
Trigger: AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GAGGTGACTGGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTG +
Preference number: 2 (lower is better)
Translates to: EVTGSPVQSPLPWED*EKLVKTVACLGELL
Trigger: CAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCCAGTCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GAGGATTTGGAGAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATaGCTGCCTGGGGAGGAGAAATGCAGCATCAGCCAATCACCTGCC +
Preference number: 2 (lower is better)
Translates to: EDLEKLVKTVACLGE*LPGEEKCSISQSPA
Trigger: GGCAGGTGATTGGCTGATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CCCTTTGCCATGGGAGGATTTGGAGAAGCTAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCCTGGGGAGGAGAAATGCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: PFAMGGFGEASEDGC*PGGIAAWGGEMQHQ
Trigger: CTGATGCTGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCCSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 2 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKARGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: VPGARLEVLAAEKATRICDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: VPGARLEVLAAEKATRICQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: EASEDGCLPGGIAASGVSPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: EASEDGCLPGGIAASGVSFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRICWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIALDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 2 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 2 (lower is better)
Translates to: GCWICHWHIHRGHATGVSGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 2 (lower is better)
Translates to: WSKVPGARLEVLAAEKATPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTTAAAGGTTTCGTTGTCTCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: ICHWHIHRGHATGVS*SRVTTVKGFVVSFW
Trigger: CCAGAAAGAGACAACGAAACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATGGCTTGGATTaGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAGACCTG +
Preference number: 2 (lower is better)
Translates to: DLGVSCFHWLGDGLD*EISCFFCSSGRVDL
Trigger: CAGGTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: KVPGARLEVLAAEKATRIYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 2 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: EASEDGCLPGGIAASGVSDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR GCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: EELKNCMIASSFMVWSTIRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: VPGARLEVLAAEKATRICVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 2 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCAGGCTGAAGTGCAGTaGCACAATCTCTGCAACCCC +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSEQAEVQ*HNLCNP
Trigger: GGGGTTGCAGAGATTGTGCCACTGCACTTCAGCCTG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp GCTTTGGATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTA +
Preference number: 2 (lower is better)
Translates to: ALDLGVSCFHWLGDG*DLEISCFFCSSGRV
Trigger: TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp CTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTGGTGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LHGRCPRLWSLLLWI*FFLQLNWPQLWCLL
Trigger: CAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: VRSAWKVSKTLEFAS*DLVLSAAELATALV
Trigger: CACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GGCTGTTTTGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTT +
Preference number: 2 (lower is better)
Translates to: GCFESCSSHMGVVHD*VVFCSLCMEGVQDF
Trigger: AAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 2 (lower is better)
Translates to: GCISGWANSIRDSDSLTDRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 2 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: SYFHKLLPCADVTISGLPDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSEPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: LVSLEELKNCMIASSFMVCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: SYFHKLLPCADVTISGLPVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 2 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 2 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: SYFHKLLPCADVTISGLPFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISALAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp AGTTTTGAGGTGTCTTGTTTCCTCTGTTCTAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTACCAGAAGCCTCCCAGGACTTAAAG +
Preference number: 2 (lower is better)
Translates to: SFEVSCFLCSKETAG*DTSWCLPEASQDLK
Trigger: CTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACAAGACACCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: HKLLPCADVTISGLPGRAYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: WSKVPGARLEVLAAEKATRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 2 (lower is better)
Translates to: QYGGCWICHWHIHRGHATISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISASGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTGCAAGTTCTTTAGGATaGCATTTGGACACAGGAATG +
Preference number: 2 (lower is better)
Translates to: WSKVPGARLEVLAAEKATASSLG*HLDTGM
Trigger: CATTCCTGTGTCCAAATGTCATCCTAAAGAACTTGC...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 2 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIALLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: HKLLPCADVTISGLPGRAHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SRSGKHIRLCWVKGKATICIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: ISSYFHKLLPCADVTISGSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp ACTTGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTG +
Preference number: 2 (lower is better)
Translates to: TWWCSVRSAWKVSKT*EFASLDLVLSAAEL
Trigger: CAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GACTCTCAACATTGTTTTCCCAGGATTTTGGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTGGTGG +
Preference number: 2 (lower is better)
Translates to: DSQHCFPRILESLAV*NPVLHTWEWSMTWW
Trigger: CCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACAATGTTGAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISATTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSYLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: EELKNCMIASSFMVWSTIQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCCAGTGGCACAATCTCTaGAACCCCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTQWHNL*NPRLLG
Trigger: ACCCAGGAGGCGGGGGTTGCAGAGATTGTGCCACTG...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 2 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: VATPQDFGEICDCDVKECRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 2 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: ISSYFHKLLPCADVTISGLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp CTTTTGTTCCTCTTGAACATACCCTGCTTTGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGATGGCTTGGATTTGGAGATCTCCTG +
Preference number: 2 (lower is better)
Translates to: LLFLLNIPCFGFRCI*LPLARRWLGFGDLL
Trigger: CAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTaGGTGTCTCCTGTTTCTTTTGTTCCTCTTGAACATACCCTGCTT +
Preference number: 2 (lower is better)
Translates to: ASLDLVLSAAELATA*VSPVSFVPLEHTLL
Trigger: AAGCAGGGTATGTTCAAGAGGAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 2 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 2 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGGTCCTTTTCAAACCCTaGAATGGTAATTTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLVLFKP*NGNFQL
Trigger: TAACTGGAAATTACCATTTCAGGGTTTGAAAAGGAC...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 2 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTATCAGGATGATAATTTaGTGCAGTCTCTTGAGAATG +
Preference number: 2 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAIRMII*CSLLRM
Trigger: CATTCTCAAGAGACTGCAGCAAATTATCATCCTGAT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISACWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 2 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 2 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSEGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp TTTCTGCAGCTGAACTGGCCACAGCTTTGGTGTCTCCTGTTTCTTTaGTTCCTCTTGAACATACCCTGCTTTGGATTTAGGTGTATCTTG +
Preference number: 2 (lower is better)
Translates to: FLQLNWPQLWCLLFL*FLLNIPCFGFRCIL
Trigger: CAAGATACACCTAAATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp TCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SIRMIICCSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR TCA 90 bp ATTTCCAGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 2 (lower is better)
Translates to: ISSYFHKLLPCADVTISGYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...ACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TGGAGTTTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTGGCCACAGCTTCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 2 (lower is better)
Translates to: WSLLLWILFFLQLNWPQLHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...AAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: VSLEELKNCMIASSFMVWEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSESWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGATGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp GGAGTAGCTGAAGGCGGTTGTGACGTTGGAATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: GVAEGGCDVGIALEG*SKSRTDSCIKLQVP
Trigger: AGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAACGTCACAACCGCCTTCAGCTACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp AGTTCCATCAGGATGATAATTTGCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SSIRMIICSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAATTATCATCCTGATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR CAA 90 bp CACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: HIRLCWVKGKATIAY*NSSIRMIICCSLLR
Trigger: TCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: VATPQDFGEICDCDVKECIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISASRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGATTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: YFHKLLPCADVTISGLPGLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: HSLTSEATSQFIKCQISAVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAAACCAATCTCAACTAGATTGTGAAGCAGACAGCTGTGAGTTACTTGGTAACCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: KNQSQLDCEADSCELLGNLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GTTACCAAGTAACTCACAGCTGTCTGCTTCACAATCTAGTTGAGATTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp CACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCAGTCTCTTGAGAATG +
Preference number: 2 (lower is better)
Translates to: HIRLCWVKGKATIAY*NSSIRMIICSLLRM
Trigger: CATTCTCAAGAGACTGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR TCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTGGTGTTTGTGTACTTaGTGTGGTAAAACTTTGATT +
Preference number: 2 (lower is better)
Translates to: SLEELKNCMIASSFMVWSWCLCT*CGKTLI
Trigger: AATCAAAGTTTTACCACAGCAAGTACACAAACACCA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 2 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: EATSQFIKCQISANCHSAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 2 (lower is better)
Translates to: EATSQFIKCQISANCHSARVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 2 (lower is better)
Translates to: LMVTELLLAGGDWKPCSETFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp GTTGGAATTGCACTTGAAGGTTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: VGIALEGLSKSRTDSCIKSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...CTTTATGCAAGAGTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 90 bp AATATCATATGCAAAGATCTTACCAGTCTCTTGAGAATGGACAGTTaGTTCTACATGTATAGATGGCAGTTGGCACTGGGGTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: NIICKDLTSLLRMDS*FYMYRWQLALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATGATAATTTGCTGCTTAAGAAAAACG +
Preference number: 2 (lower is better)
Translates to: HIRLCWVKGKATIAY*NSSIRMIICCLRKT
Trigger: CGTTTTTCTTAAGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp ATTAATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: INLPPRVHPLTDPRLLTNVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...ATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: ICSLLRMDSLFYMYRWQLSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR CCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TGCTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 2 (lower is better)
Translates to: CCSLLRMDSLFYMYRWQLGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 2 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR GCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR GCA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 2 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CCA 90 bp AAAAACCAATCTCAACTAGATTGTGAAGCAGACAGCTGTGAGTTACTTGGTAACCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 2 (lower is better)
Translates to: KNQSQLDCEADSCELLGNLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GTTACCAAGTAACTCACAGCTGTCTGCTTCACAATCTAGTTGAGATTGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CAGGAATGCAAAAGAATAGCTTTTGCTTACAATTTCAAATCTCAATaGCTGAGGATGCATACCAGTATTTGCTTTGCACAGCTTGCTGAC +
Preference number: 2 (lower is better)
Translates to: QECKRIAFAYNFKSQ*LRMHTSICFAQLAD
Trigger: GTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCATCCTCAGCAATTGAGATTTGAAATTGTAAGCAAAAGCTATTCTTTTGCATTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 90 bp CCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGTCTCTaGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: PLSLPNIICKDLTSL*RMDSLFYMYRWQLA
Trigger: TGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR TCA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 2 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CCA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 2 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR TCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: IHSLTSEATSQFIKCQISLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTGGCACATCCACAGGGG +
Preference number: 3 (lower is better)
Translates to: AEAEGRRVLAVW*LLDLSLAHPQG
Trigger: CCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTaGCACATCCACAGGGGTCATGCTACGGGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: VYWQYGGCWICH*HIHRGHATGVS
Trigger: GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 3 (lower is better)
Translates to: EASEDGCLPGGIAASGVSATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 3 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 3 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp AGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCACATCCACAGGGGTCAT +
Preference number: 3 (lower is better)
Translates to: RQRVDVYWQYGG*WICHWHIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATCCACAGGGGTCATGCT +
Preference number: 3 (lower is better)
Translates to: QRVDVYWQYGGC*ICHWHIHRGHA
Trigger: AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGGATTTGTCACTGGCAC +
Preference number: 3 (lower is better)
Translates to: NSHLLRQRVDVY*QYGGCWICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTACTGAACTACTACTaGCTGGAGGTGACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLLNYY*LEVTGS
Trigger: GCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp GGATCCTTCGGAAGGGTAGAGGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACATCTTTGGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: GSFGRVEEEPTG*CTGLGTSLGSV
Trigger: CACAGAACCCAAAGATGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTCCTCTACCCTTCCGAAGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp CCTGTTCTTCACACATGGGAGTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAG +
Preference number: 3 (lower is better)
Translates to: PVLHTWEWSMTW*CSVRSAWKVSK
Trigger: CTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAATCTGCTTCCCAAGGTaGCTCTTCGCCTTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVICFPR*LFALFV
Trigger: AACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCAAGGAAACTGCAGGCTaGGATACCTCCTGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: KVPGARLEVLAAEKATRIKETAG*DTSWCL
Trigger: TAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: WSKVPGARLEVLAAEKATTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 3 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 3 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 3 (lower is better)
Translates to: VPGARLEVLAAEKATRICSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: VPGARLEVLAAEKATRICLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTC +
Preference number: 3 (lower is better)
Translates to: SYFHKLLPCADVTISGLPGVVHD*VVFCSL
Trigger: GAGCGAACAGAACACCACCAAGTCATGGACCACTCC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGACCCTGCTCTCGAATTaGCTCGTGGACCACCAGATG +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWTLLSN*LVDHQM
Trigger: CATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR TCA 72 bp CATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTaGGTAGGTCTGGGAAACACATTCGTCTGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: HPLTDPRLLTNG*VGLGNTFVCAG
Trigger: CCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp TGTTCTAAGGAAACTGCAGGCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAGGACTTAAAGGACTCC +
Preference number: 3 (lower is better)
Translates to: CSKETAGLDTSW*LPEASQDLKDS
Trigger: GGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCTTAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGACCTGAGTTTTGAGGTG +
Preference number: 3 (lower is better)
Translates to: GDGLDLEISCFF*SSGRVDLSFEV
Trigger: CACCTCAAAACTCAGGTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp GGAGTGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTC +
Preference number: 3 (lower is better)
Translates to: GVVHDLVVFCSL*MEGVQDFGVCF
Trigger: GAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AATCCTGTTCTTCACACATGGGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: NPVLHTWEWSMT*WCSVRSAWKVS
Trigger: GGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TTCTGTGTTCAACTTCCTGGGCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTT +
Preference number: 3 (lower is better)
Translates to: FCVQLPGQQLVI*YEACCSYSPGL
Trigger: AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AGAAGAATCACTCCACCCTGCTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCCTCGCTTATAACACTG +
Preference number: 3 (lower is better)
Translates to: RRITPPCSRICS*TTRCPSSLITL
Trigger: CAGTGTTATAAGCGAGGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGGTGGAGTGATTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTT +
Preference number: 3 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFATGVS*SRVTTV
Trigger: AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGC...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGTCTGTTAAGAAACTCTaGTGGTTGTATCTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: QYGGCWICHWHIHRGHATSVKKL*WLYLWL
Trigger: CAGCCAGAGATACAACCACAAGAGTTTCTTAACAGA...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTGGCTAGGAGATGGCTaGGATTTGGAGATCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SLEELKNCMIASSFMVWSWLGDG*DLEISC
Trigger: GCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGGATTCTTTTATTTCTaGTTCTTTTCGTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCGFFYF*FFSWRQ
Trigger: CTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTATTTGCTGCAGTCTCTaGAGAATGGACAGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAICCSL*RMDSLF
Trigger: GAACAAACTGTCCATTCTCAAGAGACTGCAGCAAAT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR CCA 72 bp CTGGCTGTTTTGAATCCTGTTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: LAVLNPVLHTWE*SMTWWCSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LMVTELLLAGGD*KPCSEPFAMGG
Trigger: TCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: SYFHKLLPCADVTISGLPTRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCATTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 3 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 3 (lower is better)
Translates to: KVPGARLEVLAAEKATRILTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACG +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWLPWED*EKLVKT
Trigger: CGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTGAGAATGGACAGTTaGTTCTACATGTATAGATGG +
Preference number: 3 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHLRMDS*FYMYRW
Trigger: CCATCTATACATGTAGAACAAACTGTCCATTCTCAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GGATTTAGGTGTATCTTGCTTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: GFRCILLPLARR*LGFGDLLLLLL
Trigger: GAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TGGTCCATGACTTGGTGGTGTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: WSMTWWCSVRSA*KVSKTLEFASL
Trigger: CAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp AGTACATCCTCTAACAGATCCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: STSSNRSPAIDK*LSRSGKHIRLC
Trigger: GCACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCGGATTTAGGTGTATCTaGCTTCCACTGGCTAGGAGA +
Preference number: 3 (lower is better)
Translates to: SLEELKNCMIASSFMVWSGFRCI*LPLARR
Trigger: TCTCCTAGCCAGTGGAAGCAAGATACACCTAAATCC...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTTGCTTCTTTGGATCTaGTTCTTTCTGCAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATLLLWI*FFLQLN
Trigger: GTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTAAGGCGGTTGTGACGTaGGAATTGCACTTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIKAVVT*ELHLKV
Trigger: AACCTTCAAGTGCAATTCCAACGTCACAACCGCCTT...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 3 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLLTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 3 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACCCTTTGAAGTCTTTTaGTACGTGCTCCTGTGTCAA +
Preference number: 3 (lower is better)
Translates to: YFHKLLPCADVTISGLPGPFEVF*YVLLCQ
Trigger: TTGACACAGGAGCACGTACAAAAAGACTTCAAAGGG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 72 bp TCTCATAATGAAGCAGTTAGCTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCCTCGCTTATAACACTG +
Preference number: 3 (lower is better)
Translates to: SHNEAVSSRICS*TTRCPSSLITL
Trigger: CAGTGTTATAAGCGAGGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGAGCTAACTGCTTCATTATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTACAAGGCATTGTAACTaGCCTGGACTTGAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: HSLTSEATSQFIKCQISATRHCN*PGLEAV
Trigger: GACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTGT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTCATTCTTCATGAGGTaGACATACAGTGGCACATTC +
Preference number: 3 (lower is better)
Translates to: SLEELKNCMIASSFMVWSSFFMR*TYSGTF
Trigger: GAATGTGCCACTGTATGTCAACCTCATGAAGAATGA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAAGGTGTCCAAGACTTaGGAGTTTGCTTCTTTGGAT +
Preference number: 3 (lower is better)
Translates to: YFHKLLPCADVTISGLPGKVSKT*EFASLD
Trigger: ATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: HSLTSEATSQFIKCQISALLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCAGTGAAGACGGTTGCTaGCCTGGGGGAATTGCTGCC +
Preference number: 3 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLISEDGC*PGGIAA
Trigger: GGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGCCTGTTCAGAGCCCTTaGCCATGGGAGGATTTGGAG +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMPVQSP*PWEDLE
Trigger: CTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGG...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGGCACTGGGGTGGTGTTaGTGTACTTGCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWALGWC*CTCCGK
Trigger: TTTACCACAGCAAGTACACAAACACCACCCCAGTGC...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 3 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGGCTACCATTGCTTACTaGAATAGTTCCATCAGGATG +
Preference number: 3 (lower is better)
Translates to: VSLEELKNCMIASSFMVWATIAY*NSSIRM
Trigger: CATCCTGATGGAACTATTCAAGTAAGCAATGGTAGC...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGGTAGTCAAGTTCTTTaGAAGGCAAATACACTGCAC +
Preference number: 3 (lower is better)
Translates to: SRSGKHIRLCWVKGKATIGSQVL*KANTLH
Trigger: GTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACC...AATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTCATCAGGATGATAATTaGCTGCAGTCTCTTGAGAAT +
Preference number: 3 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAHQDDN*LQSLEN
Trigger: ATTCTCAAGAGACTGCAGCAAATTATCATCCTGATG...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR TCA 72 bp AGTTTCATGGTCTGGAGCACCATCATTGGCATAGGCTaGTACCAAGACCTCTTCATTCTTCATGAGGTTGAC +
Preference number: 3 (lower is better)
Translates to: SFMVWSTIIGIG*YQDLFILHEVD
Trigger: GTCAACCTCATGAAGAATGAAGAGGTCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAGACCATGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp GAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGTGTACTTGCTGTGGTA +
Preference number: 3 (lower is better)
Translates to: EWTVCSTCIDGS*HWGGVCVLAVV
Trigger: TACCACAGCAAGTACACAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TGTCTTTCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATGCCTAGGTCCCGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 3 (lower is better)
Translates to: CLSTVEGRTESGHLCLGPVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...GGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGTTGACTGGACAGATTTaGTTCTTTAGATGCTACGGG +
Preference number: 3 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELTGQI*FFRCYG
Trigger: CCCGTAGCATCTAAAGAACAAAATCTGTCCAGTCAA...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TTGCTTCTTTGGATCTTGTTCTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTCCTGTTTCTTTTGTTC +
Preference number: 3 (lower is better)
Translates to: LLLWILFFLQLN*PQLWCLLFLLF
Trigger: GAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACAAGATCCAAAGAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGTGGTGGCTGCTGGATTaGTCACTGGCACATCCACAG +
Preference number: 3 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLWWLLD*SLAHPQ
Trigger: CTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCA...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: HSLTSEATSQFIKCQISAKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp GAGGTCATAAACTCTGTTTCAGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAAGCATTTGAGCTACAA +
Preference number: 3 (lower is better)
Translates to: EVINSVSDPEEA*SVVTKQAFELQ
Trigger: TTGTAGCTCAAATGCTTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATCTGAAACAGAGTTTATGACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR GCA 72 bp TCAACAGTAGAGGGGAGAACAGAATCAGGTCATCTATaGCTAGGTCCCAGAATTCATATTACTACCTCTTCA +
Preference number: 3 (lower is better)
Translates to: STVEGRTESGHL*LGPRIHITTSS
Trigger: TGAAGAGGTAGTAATATGAATTCTGGGACCTAGGCATAGATGACCTGATTCTGTTCTCCCCTCTACTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CCA 72 bp CCTAAGTTGTTCAGAAGAAGATCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PKLFRRRSNTIG*SKVPGARLEVL
Trigger: CAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTTCTGAACAACTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp TGGTTCAGTAAGCATATCCCAACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGCTTCCCAAGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: WFSKHIPTFWEI*FSSIICFPRLL
Trigger: GAGCAACCTTGGGAAGCAGATTATGCTAGAAAACCAAATCTCCCAAAACGTTGGGATATGCTTACTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp ACAGTTTGTTCTACATGTATAGATGGCAGTTGGCACTaGGGTGGTGTTTGTGTACTTGCTGTGGTAAAACTT +
Preference number: 3 (lower is better)
Translates to: TVCSTCIDGSWH*GGVCVLAVVKL
Trigger: AAGTTTTACCACAGCAAGTACACAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGAGCTACTTCCATAAATaGCTCCCCTGTGCAGACGTA +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMSYFHK*LPCADV
Trigger: TACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGACTCCTGTTTCTTCTCTaGACCATCTGGTTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGLLFLL*TIWFSK
Trigger: CTTACTGAACCAGATGGTCAAGAGAAGAAACAGGAG...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCATGTATAGATGGCAGTaGGCACTGGGGTGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLIMYRWQ*ALGWCL
Trigger: CAAACACCACCCCAGTGCCAACTGCCATCTATACAT...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 3 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATTTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGAAGAAACTCTTGTGGTaGTATCTCTGGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: ICSLLRMDSLFYMYRWQLKKLLW*YLWLGK
Trigger: TTTGCCCAGCCAGAGATACAACCACAAGAGTTTCTT...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGTGTTTTCCCAGGATTTaGGAGTCTCTGGCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMCFPRI*ESLAVL
Trigger: CAAAACAGCCAGAGACTCCAAAATCCTGGGAAAACA...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGCTACTCCCCAGGACTTaGGAGAAATCTGTGACTGTG +
Preference number: 3 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLLLPRT*EKSVTV
Trigger: CACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAG...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TGCTGCAGTCTCTTGAGAATGGACAGTTTGTTCTACATGTATAGATGGCAGTTGACGTTGGAATTGCACTaGAAGGTTTGTCAAAGTCAA +
Preference number: 3 (lower is better)
Translates to: CCSLLRMDSLFYMYRWQLTLELH*KVCQSQ
Trigger: TTGACTTTGACAAACCTTCAAGTGCAATTCCAACGT...CAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTCAAGAGACTGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp GTCCTCTATAAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGCATCAGGATGATAATTaGCAGTCTCTTGAGAATGGA +
Preference number: 3 (lower is better)
Translates to: VLYKYQNLYNHQGTDRNWHQDDN*QSLENG
Trigger: TCCATTCTCAAGAGACTGCAAATTATCATCCTGATG...CCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454014.6
3UTR-3UTR CAA 90 bp ATACTTCTAAAGTGTCACTACAGACTTCCTAGACTTGCTGTCCATTCAATTGGCATTGCACTTGAAGGTTaGTCAAAGTCAAGAACAGAC +
Preference number: 3 (lower is better)
Translates to: ILLKCHYRLPRLAVHSIGIALEG*SKSRTD
Trigger: GTCTGTTCTTGACTTTGACAAACCTTCAAGTGCAAT...GCCAATTGAATGGACAGCAAGTCTAGGAAGTCTGTAGTGACACTTTAGAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTCCGTTGTGACGTTGGAATaGCACTTGAAGGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: YQNLYNHQGTDRNWLLISVVTLE*HLKVCQ
Trigger: TTGACAAACCTTCAAGTGCAATTCCAACGTCACAAC...GGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp ATTCAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATGCAAAGATCTTACCAGAATACTCTCTAGCTaGGAACTGCAGCTGGCTATA +
Preference number: 3 (lower is better)
Translates to: IQLAVPLSLPNIICKDLTRILSS*ELQLAI
Trigger: TATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCT...GGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 72 bp ATCTGCTTCCCAAGGTTGCTCTTCGCCTTGTTTGTTTaGATAATCTACTTCTGTCATATAGCGTCTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ICFPRLLFALFV*IIYFCHIASVK
Trigger: CTTAACAGACGCTATATGACAGAAGTAGATTATTCAAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AGAGGTGCATTAACGTTAAATACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATGGTTACTGAACTACTA +
Preference number: 3 (lower is better)
Translates to: RGALTLNTVCMA*KGAVLMVTELL
Trigger: TAGTAGTTCAGTAACCATTAACACAGCACCCTTTCAAGCCATGCAGACAGTATTTAACGTTAATGCACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp GAGGATGCATACCAGTATTTGCTTTGCACAGCTTGCTaGCTAAGTGAAAGAGTCTTACCAATAATCAGTCTA +
Preference number: 3 (lower is better)
Translates to: EDAYQYLLCTAC*LSERVLPIISL
Trigger: TAGACTGATTATTGGTAAGACTCTTTCACTTAGTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCATCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 72 bp CAATTGGCTGTCCCTCTAAGTCTTCCAAATATCATATaGAAAGATCTTACCAGTCTCTTGAGAATGGACAGT +
Preference number: 3 (lower is better)
Translates to: QLAVPLSLPNII*KDLTSLLRMDS
Trigger: ACTGTCCATTCTCAAGAGACTGGTAAGATCTTTGCATATGATATTTGGAAGACTTAGAGGGACAGCCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp GCTTACTTGAATAGTTCCATCAGGATGATAATTTGCTGCAGTCTCTTGAGAATGTTTTCCTTGGCATTTTaGGGAACTGGGATACTTTCA +
Preference number: 3 (lower is better)
Translates to: AYLNSSIRMIICCSLLRMFSLAF*GTGILS
Trigger: TGAAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAA...CATTCTCAAGAGACTGCAGCAAATTATCATCCTGATGGAACTATTCAAGTAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTGTCAAAGTCAAGAACAGACTCTTGCATAAAGTTACAAGTTCCTTGAATCTGGAGTCTCTGGCTGTTTaGAATCCTGTTCTTCACACA +
Preference number: 3 (lower is better)
Translates to: FVKVKNRLLHKVTSSLNLESLAV*NPVLHT
Trigger: TGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTC...CAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTTGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AACTTGCCTGGACTTGAGGCAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGGATTAAGTGCAAACAA +
Preference number: 3 (lower is better)
Translates to: NLPGLEAVSLVS*TLIQLRIKCKQ
Trigger: TTGTTTGCACTTAATCCTTAACTGTATTAACGTTCAGCTTACTAAACTGACTGCCTCAAGTCCAGGCAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AAATTAAGACAATTGGTCTTTTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTCAGATCCAGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: KLRQLVFYLRSL*GHKLCFRSRRS
Trigger: GCTTCTTCTGGATCTGAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTAAAAGACCAATTGTCTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR TCA 72 bp AACCCAAACTGGCATAAGTCAGCAAGTTCTTTAGGATaGCATTTGGACACAGGAATGCAAAAGAATAGCTTT +
Preference number: 3 (lower is better)
Translates to: NPNWHKSASSLG*HLDTGMQKNSF
Trigger: AAAGCTATTCTTTTGCATTCCTGTGTCCAAATGTCATCCTAAAGAACTTGCTGACTTATGCCAGTTTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTATATACATTCACAGCTaGACTAGCGAGGCTACATCA +
Preference number: 3 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCIYIHS*TSEATS
Trigger: TGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATAT...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp AAGTATCAAAACCTTTATAACCACCAGGGGACCGATAGGAATTGGTTATTAATCTTGGAGTTTGCTTCTTaGGATCTTGTTCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: KYQNLYNHQGTDRNWLLILEFAS*DLVLSA
Trigger: TGCAGAAAGAACAAGATCCAAAGAAGCAAACTCCAA...GATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR TCA 72 bp AGGTCCCAGAATTCATATTACTACCTCTTCATCACTTaGTTAGCCAAGTACTCAGAATGCTCAATTCATTTG +
Preference number: 3 (lower is better)
Translates to: RSQNSYYYLFIT*LAKYSECSIHL
Trigger: CAAATGAATTGAGCATTCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTAGTAATATGAATTCTGGGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR GCA 72 bp TTCTTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGTCTGCATGGCTTGAAA +
Preference number: 3 (lower is better)
Translates to: FFYFLFFSWRQR*INVKYCLHGLK
Trigger: TTTCAAGCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTGTCAAGAACAGACTCTaGCATAAAGTTACAAGTTCC +
Preference number: 3 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCVKNRL*HKVTSS
Trigger: GGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGAC...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR-3UTR CAA 90 bp TTTTATTTCTTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTTCGCCTTGTTTGTTaGAATAATCTACTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: FYFLFFSWRQRCINVKYCLRLVC*NNLLLS
Trigger: TGACAGAAGTAGATTATTCAAACAAACAAGGCGAAG...ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CCA 72 bp CTGGAGGTGGACAGTGGTAATAATTACACAACAGTTTaGTTGTACTTAATGCCACAGAACTATATAGTTAAA +
Preference number: 3 (lower is better)
Translates to: LEVDSGNNYTTV*LYLMPQNYIVK
Trigger: TTTAACTATATAGTTCTGTGGCATTAAGTACAACCAAACTGTTGTGTAATTATTACCACTGTCCACCTCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCACAGAACAGGCCCCATaGACGCCAGCGCGCACCCCC +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCTEQAP*TPARTP
Trigger: GGGGGTGCGCGCTGGCGTGCATGGGGCCTGTTCTGT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCTTCCCCGATTGCTCTaGGGCCTACAAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLPRLL*GLQGNP
Trigger: TGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHRRLLA*GNCCLR
Trigger: CCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCRRLLA*GNCCLR
Trigger: CCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTACTGTCCTCGGCCTCCTaGGTACCTGGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVLSSAS*VPGTRG
Trigger: GCCTCTAGTCCCAGGTACTCAGGAGGCCGAGGACAG...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACAGTGGCACAATCTCTaGAACCCCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRQWHNL*NPRLLG
Trigger: ACCCAGGAGGCGGGGGTTGCAGAGATTGTGCCACTG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTTCCCCGATTGCTCTaGGGCCTACAAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLLPRLL*GLQGNP
Trigger: TGGATTGCCTTGTAGGCCCCAGAGCAATCGGGGAAG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPRRLLA*GNCCLR
Trigger: CCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
3UTR CAA 72 bp GGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTaGTCACTGGCACATCCACAGGGGTCATGCTACGGG +
Preference number: 4 (lower is better)
Translates to: GRRVLAVWWLLD*SLAHPQGSCYG
Trigger: CCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp GGAAGCCCTGTTCAGAGCCCTTTGCCATGGGAGGATTaGGAGAAGCTAGTGAAGACGGTTGCTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSPVQSPLPWED*EKLVKTVACLG
Trigger: CCCCAGGCAAGCAACCGTCTTCACTAGCTTCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGCCTGGGGGAATTGCTaGCTGGGGAGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRAWGNC*LGRRNA
Trigger: TGCATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAGACGGTTGCTTGCCTaGGGGAATTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRRRLLA*GNCCLG
Trigger: CCCCAGGCAGCAATTCCCCCAGGCAAGCAACCGTCT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPTTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTAATCAGTGGCCCTTaGGCACTTACGTATCCGTCT +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLISGP*ALTYPS
Trigger: AGACGGATACGTAAGTGCGCAAGGGCCACTGATTAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGAGTGGTCCATGACTTaGTGGTGTTCTGTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCEWSMT*WCSVRS
Trigger: AGAGCGAACAGAACACCACCAAGTCATGGACCACTC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTCTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCCCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPCSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTACCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTYLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCACTACTTGCTGGAGGTaGCTGGAAGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRITTCWR*LEALFR
Trigger: TCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHADLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTGTTCAGAGCCCTTTaGCATGGGAGGATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLFRAL*HGRIWR
Trigger: TCTCCAAATCCTCCCATGGCAAAGGGCTCTGAACAG...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGCAATCCATCACTACTaGACATTTGCAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTAIHHY*TFADRY
Trigger: GTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTATCTTGCTTCCACTaGCTAGGAGATGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPVSCFH*LGDGLD
Trigger: ATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATAC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCTGTTCTTCACACATaGGAGTGGTCCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCPVLHT*EWSMTW
Trigger: CCAAGTCATGGACCACTCCCATGTGTGAAGAACAGG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACTGTGTTCAACTTCCTaGGCAGCAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVLCSTS*AAAGHL
Trigger: CAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCACAGTATGGTGGCTGCTaGATTTGTCACTGGCACATC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPQYGGC*ICHWHI
Trigger: GATGTGCCAGTGACAAATCCAGCAGCCACCATACTG...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WSKVPGARLEVLAAEKATRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGAGGTTGACATACAGTaGCACATTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESEVDIQ*HIHCQL
Trigger: AAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRALAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
3UTR CAA 72 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTaGTCCAGAGTCACCACTGTTAAAGGTTTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVS*SRVTTVKGFVV
Trigger: GACAACGAAACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCGAGCTCGAAACCCAATaGTGCTTGAGATACTTGTAC +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVELETQ*CLRYLY
Trigger: GTACAAGTATCTCAAGCATCATTGGGTTTCGAGCTC...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGGAGCTCGAAACCCAATaGTGCTTGAGATACTTGTAC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWELETQ*CLRYLY
Trigger: GTACAAGTATCTCAAGCATCATTGGGTTTCGAGCTC...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTCTTTTCCACAGAAGTaGGCTCGAAACCCAATGATG +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTSFPQK*ARNPMM
Trigger: CATCATTGGGTTTCGAGCTCACTTCTGTGGAAAAGA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCPKVQG*LLHLVF
Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGATCCAGAAGAAGCCTaGTCGGTAGTAACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLDPEEA*SVVTKQ
Trigger: TTGCTTGGTTACTACCGATCAGGCTTCTTCTGGATC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCATGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSCLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTGGTACTCTCTCAACCTaGAGGAACCCCGCGTTTATT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGGTLST*RNPAFI
Trigger: AATAAACGCGGGGTTCCTGCAGGTTGAGAGAGTACC...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHSSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRSSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPCRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESCRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESSASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTATCTCCTGCTTCTTCTaGTCTTCCGGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGISCFF*SSGRVD
Trigger: GTCTACTCTGCCGGAAGAGCAGAAGAAGCAGGAGAT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCATTGCTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RSGKHIRLCWVKGKATIAHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGCAATGGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGATGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGTTAGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRVSSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCTAAC...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000537553.5
CDS-3UTR GCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTTAGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLVSSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCTAAC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000537553.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGGTTCACTTGGGGCTTaGCTGACTTCATATTCCCCT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRGSLGA*LTSYSP
Trigger: AGGGGAATATGAAGTCAGCCAAGCCCCAAGTGAACC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCAGGGTAGACGTGTACTaGCAGTATGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGRVDVY*QYGGCW
Trigger: CCAGCAGCCACCATACTGCCAGTACACGTCTACCCT...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATGCTGGAAATTATCCTaGCCTTCCCCAGCAACCAAA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPCWKLS*PSPATK
Trigger: TTTGGTTGCTGGGGAAGGCCAGGATAATTTCCAGCA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433722.6
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTTCTTTTCCACAGAAGTaGGCTCGAAACCCAATGATG +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSSFPQK*ARNPMM
Trigger: CATCATTGGGTTTCGAGCTCACTTCTGTGGAAAAGA...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp AAGACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTGGCTTTCCCCATGCTaGCTGTGGTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KTSSFFMRLTYSGTFTASWLSPC*LWFTWG
Trigger: GCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCA...GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTTGTTCTTTCTGCAGCTaGACTGGCCACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKACSFCS*TGHSFG
Trigger: ACCAAAGCTGTGGCCAGTTCAGCTGCAGAAAGAACA...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCCGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTATACATTCACAGCTTaGCTAGCGAGGCTACATCAC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAYTFTA*LARLHH
Trigger: GTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRITVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTACAGAACAGGCCCCATaGACGCCAGCGCGCACCCCC +
Preference number: 4 (lower is better)
Translates to: IHSLTSEATSQFIKCQISTEQAP*TPARTP
Trigger: GGGGGTGCGCGCTGGCGTGCATGGGGCCTGTTCTGT...ACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATCACTACTGGACATTTaGAGACAGGTACTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPSLLDI*RQVLSQ
Trigger: TTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGA...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATCACTACTGGACATTTaGAGACAGGTACTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESSLLDI*RQVLSQ
Trigger: TTGAGAGAGTACCTGTCTGCAAATGTCCAGTAGTGA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTATAGGGAGGAAGAACTaGAACGGCTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAIGRKN*NGFRAP
Trigger: AGGAGCTCTGAAGCCGTTGCAGTTCTTCCTCCCTAT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTCTCTGGGCCTTCTTTTaGGCTTTTAGTAGATCTAGG +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLLWAFF*AFSRSR
Trigger: CCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAG...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRISSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICKYKDD*SIWSST
Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGTCGTTCCTACCACTaGTTTCTCACTACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHACRSYH*FLTTFQ
Trigger: TTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000433722.6
CDS-3UTR GCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAGATTTGGAGATCTCCTaGTTCTTCTGCTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVDLEIS*FFCSSG
Trigger: GCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATC...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCATTTTGTTCTTTAGATaGTACGGGGCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NSHLLRQRVDVYWQYGGCILFFR*YGATWS
Trigger: ACTCCAGGTAGCCCCGTAGCATCTAAAGAACAAAAT...GCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTAAACACATTCGTCTGTaGTGGGTAAAAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAKHIRL*WVKGKA
Trigger: AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCCCCTGCTCTCGAATTTaGTCGTGGACCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGPCSRI*SWTTRC
Trigger: ACATCTGGTGGTCCACGAGCAAATTCGAGAGCAGGG...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCATGCATACCAGTATTTaGTTTGCACAGCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCMHTSI*FAQLAD
Trigger: GTCAGCAAGCTGTGCAAAGCAAATACTGGTATGCAT...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCTTGCCTGGGGGAATTaGTGCCTGGGGAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPLAWGN*CLGRRN
Trigger: ATTTCTCCTCCCCAGGCAGCAATTCCCCCAGGCAAG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCGCCAAGTACTCAGAATaGTCAATTCATTTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCAKYSE*SIHLLR
Trigger: TCGGAGCAAATGAATTGAGCATTCTGAGTACTTGGC...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGCAATCCATCACTACTaGACATTTGCAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPAIHHY*TFADRY
Trigger: GTACCTGTCTGCAAATGTCCAGTAGTGATGGATTGC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTAGCTTCCAACTGGTCTaGATTAAGATGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLSFQLV*IKMLST
Trigger: AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCATGTGCTCCCTTCTCTaGGCCTTCTTTTGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIMCSLL*AFFCAF
Trigger: AAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACAT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCATTTCTTCCTCCAGTaGTACTTCCTTTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCHFFLQ*YFLFLG
Trigger: GCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATG...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGTTAAGAAACTCTTGTaGTTGTATCTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPVKKLL*LYLWLG
Trigger: GCCCAGCCAGAGATACAACCACAAGAGTTTCTTAAC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: LAVWWLLDLSLAHPQGSCLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: WSKVPGARLEVLAAEKATPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...AGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SPTTSTSSNRSPAIDKWLFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...CAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGSVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGTATAGATGGCAGTTaGCACTGGGGTGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGCIDGS*HWGGVC
Trigger: ACAAACACCACCCCAGTGCCAACTGCCATCTATACA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTCTACATGTATAGATaGCAGTTGGCACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGFYMYR*QLALGW
Trigger: CCACCCCAGTGCCAACTGCCATCTATACATGTAGAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTCACATTCGTCTGTGCTaGGTAAAAGGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKAHIRLC*VKGKAT
Trigger: GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTG...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACCGGCTATTGACAAATaGCTGAGTAGGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRPAIDK*LSRSGK
Trigger: TTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DVYWQYGGCWICHWHIHRSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...CCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTTCAAACACAATAGGTTaGTCTAAAGTTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: EASEDGCLPGGIAASGVSSNTIG*SKVPGA
Trigger: GGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGA...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGACTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRLEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTGCTAGCAGTTTCATaGTCTGGAGCACCATCATTG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLLAVS*SGAPSL
Trigger: CAATGATGGTGCTCCAGACCATGAAACTGCTAGCAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TTAATGGTTACTGAACTACTACTTGCTGGAGGTGACTGGAAGCCCTGTTCAGAGCTTGCTGGAGGTGACTaGAAGCCCTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LMVTELLLAGGDWKPCSELAGGD*KPCSEP
Trigger: GGGCTCTGAACAGGGCTTCCAGTCACCTCCAGCAAG...CTCTGAACAGGGCTTCCAGTCACCTCCAGCAAGTAGTAGTTCAGTAACCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGAGATGAAAAGTTCTaGAGGTGGACAGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPGDEKF*RWTVVI
Trigger: TATTACCACTGTCCACCTCCAGAACTTTTCATCTCC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
3UTR CAA 72 bp GAATCCTGTTCTTCACACATGGGAGTGGTCCATGACTaGGTGGTGTTCTGTTCGCTCTGCATGGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ESCSSHMGVVHD*VVFCSLCMEGV
Trigger: GACACCTTCCATGCAGAGCGAACAGAACACCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAATTGTCATTCAGCTGTCTCCGGGGGAGCCTaGGCGAAGAGCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: EATSQFIKCQISANCHSAVSGGA*AKSTSP
Trigger: GGGAGAGGTGCTCTTCGCTCAGGCTCCCCCGGAGAC...AGCTGAATGACAATTAGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTACATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGCATTCAAACCCCCTTTaGAGTCTTTTTGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLHSNPL*SLFVRA
Trigger: AGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATG...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHRAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVSLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTAGTCTCTGGCTGTTTTaGATCCTGTTCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHASLWLF*ILFFTH
Trigger: ATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACT...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGAAGAACCTACAGGCTaGTGCACAGGCTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPEEPTG*CTGLGT
Trigger: TGTGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCACGTTGGAATTGCACTTaGAGGTTTGTCAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPRWNCT*RFVKVK
Trigger: CTTGACTTTGACAAACCTTCAAGTGCAATTCCAACG...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: GCWICHWHIHRGHATGVSLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...GGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGATCATTGGCATAGGCTaGTACCAAGACCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATIIGIG*YQDLFI
Trigger: AATGAAGAGGTCTTGGTATCAGCCTATGCCAATGAT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: HWHIHRGHATGVSLSRVTVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...GGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LAHPQGSCYGSLLVQSHHVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...GTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLCVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTGTGTTAATGGTTACTaGACTACTACTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHACVNGY*TTTCWR
Trigger: CCTCCAGCAAGTAGTAGTTCAGTAACCATTAACACA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTAGCGAGCCCTTCCCGTaGCCTAATCAGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISASEPFP*PNQWPL
Trigger: CAAGGGCCACTGATTAGGGCACGGGAAGGGCTCGCT...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR GCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTTCAAGTTTTAGCATGTaGTCCCTTCTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKASSFSM*SLLWAF
Trigger: GAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGA...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLKYKDD*SIWSST
Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
CDS-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTCTGCTTCCCAAGGTTaGTCTTCGCCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRISASQG*SSPCLF
Trigger: AAACAAACAAGGCGAAGAGCAACCTTGGGAAGCAGA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLAHPQGSCYGSLLVQSHFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCTTGGATACCTCCTGGTaGTTACCAGAAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSLDTSW*LPEASQ
Trigger: CTGGGAGGCTTCTGGTAAGCACCAGGAGGTATCCAA...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHADLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTGATTTAGGTGTATCTTaGTTCCACTGGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVDLGVS*FHWLGD
Trigger: ATCTCCTAGCCAGTGGAAGCAAGATACACCTAAATC...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTGGCAGTATGGTGGCTaGTGGATTTGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWWQYGG*WICHWH
Trigger: GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTGCGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VPGARLEVLAAEKATRICEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...GCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RQLASAEAEGRRVLAVWWEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...CCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCAGAATCACTCCACCCTaGTGTTTTATTAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: CHWHIHRGHATGVSLSRVRITPP*CFISNS
Trigger: ACTGTTGCTAATAAAACAGCAGGGTGGAGTGATTCT...GACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000537553.5
CDS-3UTR CCA 90 bp TGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: CWICHWHIHRGHATGVSLVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...CAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTGTACTTCCTTTTCCTTaGCATTTTTGGGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: EASEDGCLPGGIAASGVSVLPFP*HFWELG
Trigger: TCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTAC...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR CCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACCTTCTCTTGACCATCTaGTTCAGTAAGCATATCCCA +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHLLLTI*FSKHIP
Trigger: TGGGATATGCTTACTGAACCAGATGGTCAAGAGAAG...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTTTCTGCAGCTGAACTaGCCACAGCTTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGFLQLN*PQLWCL
Trigger: GAGACACCAAAGCTGTGGCCAGTTCAGCTGCAGAAA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCATTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: GFVTGTSTGVMLRESPCPFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...TGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTTTCTTGTTCTTTTCGTaGAGGCAGAGGTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: WQYGGCWICHWHIHRGHAFLFFS*RQRCIN
Trigger: GTTAATGCACCTCTGCCTCCACGAAAAGAACAAGAA...AGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTGGGACCGATAGGAATTaGTTATTAATCTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGGTDRN*LLISHH
Trigger: GTGGTGGGAGATTAATAACCAATTCCTATCGGTCCC...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGTACTGGCAGTATGGTaGCTGCTGGATTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAVLAVW*LLDLSL
Trigger: CAGTGACAAATCCAGCAGCCACCATACTGCCAGTAC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTGTAAGTGCCATTCACTaGGCAATTAAATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPVSAIH*AIKSTK
Trigger: CTTGGTAGATTTAATTGCCCAGTGAATGGCACTTAC...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTAGCAGTTTCATGGTCTaGAGCACCATCATTGGCATA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGSSFMV*STIIGI
Trigger: TATGCCAATGATGGTGCTCCAGACCATGAAACTGCT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAAACAATATACATTCACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGGTCTCCGGGGGAGCCTaGGCGAAGAGCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QTIYIHSLTSEATSQFIKVSGGA*AKSTSP
Trigger: GGGAGAGGTGCTCTTCGCTCAGGCTCCCCCGGAGAC...CTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTGAATGTATATTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATATAATCCTCCAGTTTaGGCTTCTTTTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESYNPPV*ASFSRC
Trigger: ACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: QLASAEAEGRRVLAVWWLTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...CAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAAGTAGACCTGAGTTTTaGGGTGTCTTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVSRPEF*GVLFPL
Trigger: CAGAGGAAACAAGACACCTCAAAACTCAGGTCTACT...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTTCTTTTGTTCCTCTTaGACATACCCTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWFFCSS*TYPALD
Trigger: ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRINQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATTCTGGGCTGCTCACCTaGGAAGAATCACTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GCISGWANSIRDSDSLTDSGLLT*EESLHP
Trigger: AGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGA...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCAGAGGTTCTGGCTGCTaGGAAGGCAACTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGRGSGC*EGNSHL
Trigger: CAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp ACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TGTSTGVMLRESPCPESPVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...TGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCGCAAGTTCTTTAGGATaGCATTTGGACACAGGAATG +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIASSLG*HLDTGM
Trigger: CATTCCTGTGTCCAAATGTCATCCTAAAGAACTTGC...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp AGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGTACCTCTTCATCACTTaGTTAGCCAAGTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SMVAAGFVTGTSTGVMLRYLFIT*LAKYSE
Trigger: TTCTGAGTACTTGGCTAATCAAGTGATGAAGAGGTA...CCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTATGCTACAACATGAATaGACCCTTAAGACATGCCAA +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLMLQHE*TLKTCQ
Trigger: TTGGCATGTCTTAAGGGTTCATTCATGTTGTAGCAT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCGCTAACTTCCCCGATTaGTCTGGGGCCTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGANFPD*SGAYKA
Trigger: TGCCTTGTAGGCCCCAGAGCAATCGGGGAAGTTAGC...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp AGTGCCAGATTAGTGCTAATTGTCATTCAGCTTGATTTTTCACCTCAGGAAGGAGAACTCAGAGTAGACTaGAGGGGGCTCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SARLVLIVIQLDFSPQEGELRVD*RGLKAR
Trigger: GCGGGCCTTGAGCCCCCTGCAGTCTACTCTGAGTTC...TCCTTCCTGAGGTGAAAAATCAAGCTGAATGACAATTAGCACTAATCTGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR GCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGATGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCTGGTCTGGATTAAGATaGTCTCCACTTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATWSGLR*SPLFRR
Trigger: TCGCCTGAAAAGTGGAGAGCATCTTAATCCAGACCA...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSLAHPQGSCYGSLLVQSFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...ACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTTTCTAGCATAATCTaGTTCCCAAGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCFSSII*FPRLLF
Trigger: GAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVLLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTGTCTCTTTCTGGGCTaGTCACCTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGCLFLG*SPEKNH
Trigger: GTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGTTGTATCTCTGGCTGGGCAAATTCCATTAGAGACTCTGACTCTTTGACAGATCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GCISGWANSIRDSDSLTDHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...ATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGAAGAGCTGAAGAATTaGATGATTGCTAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLEELKN*MIASSF
Trigger: GAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ACCTCTTCATTCTTCATGAGGTTGACATACAGTGGCACATTCACTGCCAGCTTTGTGAAGACGGTTGCTTaGCTGGGGGAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSSFFMRLTYSGTFTASFVKTVA*LGELLP
Trigger: AGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCAC...AAAGCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGATCGTGGAGGCAGAGGTaGATTAACGTTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRSWRQR*INVKYC
Trigger: ACAGTATTTAACGTTAATGCACCTCTGCCTCCACGA...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAAGAATCACTCCACCCTaGTGTTTTATTAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSRITPP*CFISNS
Trigger: ACTGTTGCTAATAAAACAGCAGGGTGGAGTGATTCT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000537553.5
CDS-3UTR CCA 90 bp GTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCATCAATCCTGAACGTTTaGAAGAAAATCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: VTGTSTGVMLRESPCPESSILNV*KKIQTH
Trigger: GTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGA...TGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTTCAATCCTGAACGTTTaGAAGAAAATCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTSILNV*KKIQTH
Trigger: GTGAGTTTGGATTTTCTTCCAAACGTTCAGGATTGA...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR CCA 90 bp GCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: AAGFVTGTSTGVMLRESPTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAARKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGAGGAAACTGCAGGCTTaGATACCTCCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLRKLQA*IPPGAY
Trigger: GTAAGCACCAGGAGGTATCCAAGCCTGCAGTTTCCT...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCCCACTGGCTAGGAGATaGCTTGGATTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVPLARR*LGFGDL
Trigger: GAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGG...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTAGGTGTCCAAGACTTTaGAGTTTGCTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGRCPRL*SLLLWI
Trigger: GATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCT...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTTCTGTTCGCTCTGCATaGAAGGTGTCCAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRASVRSA*KVSKTL
Trigger: CAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGA...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGTGGTCCATGACTTGGTaGTGTTCTGTTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSLEELKNCMIASSFMVWWSMTW*CSVRSA
Trigger: TGCAGAGCGAACAGAACACCACCAAGTCATGGACCA...CCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACTTCACACATGGGAGTaGTCCATGACTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGLHTWE*SMTWWC
Trigger: ACACCACCAAGTCATGGACCACTCCCATGTGTGAAG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SLEELKNCMIASSFMVWSQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...GCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTCAGCAGCTGGTCATTTaGTATGAGGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAAQQLVI*YEACCS
Trigger: GCTACAGCAAGCCTCATACCAAATGACCAGCTGCTG...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCTTCTTTCCTCAATACTaGATCCTTCGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIFFPQY*ILRKGR
Trigger: TCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGAA...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCAGTTGGCACTGGGGTaGTGTTTGTGTACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPQLALG*CLCTCC
Trigger: ACAGCAAGTACACAAACACCACCCCAGTGCCAACTG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGGCTATAATTTCCATTaGAAATTGAAGGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLGYNFH*KLKGVL
Trigger: GAGGACTCCCTTCAATTTCCAATGGAAATTATAGCC...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTGTTCTGTTCGCTCTGCATGGAAGGTGTCCAAGACTTTGGAGTTTGCTTCTTTTCTCGAATTTGCTCGTaGACCACCAGATGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VFCSLCMEGVQDFGVCFFSRICS*TTRCPS
Trigger: GGAGGGACATCTGGTGGTCCACGAGCAAATTCGAGA...AAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGCTGGATTTGTCACTaGCACATCCACAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VIWYEACCSYSPGLWRNLCWICH*HIHRGH
Trigger: ATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCA...CAGATTTCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCCGTGTACTGGCAGTATaGTGGCTGCTGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVRVLAV*WLLDLS
Trigger: TGACAAATCCAGCAGCCACCATACTGCCAGTACACG...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTCTGGAGCACCATCATTaGCATAGGCTGATACCAAGA +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRALEHHH*HRLIPR
Trigger: TCTTGGTATCAGCCTATGCCAATGATGGTGCTCCAG...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp TGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGAAAAGTTCTGGAGGTaGACAGTGGTAATAATTACA +
Preference number: 4 (lower is better)
Translates to: WHIHRGHATGVSLSRVTTEKFWR*TVVIIT
Trigger: TGTAATTATTACCACTGTCCACCTCCAGAACTTTTC...AGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp CACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTAAAGGTTTTTATAGCTCTAAGTaGACCAGCAGCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HRGHATGVSLSRVTTVKGFYSSK*TSSFLN
Trigger: GTTCAAGAAGCTGCTGGTTCACTTAGAGCTATAAAA...ACCTTTAACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000454014.6
CDS-3UTR TCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCAAACCCAATGATGCTTaGGATACTTGTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRIKPNDA*DTCTSI
Trigger: GATGGAAGTACAAGTATCTCAAGCATCATTGGGTTT...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395805.6
ENST00000454014.6
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTATAATCCTCCAGTTTaGGCTTCTTTTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWYNPPV*ASFSRC
Trigger: ACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATA...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395805.6
ENST00000454014.6
ENST00000537553.5
CDS-3UTR TCA 90 bp TGGCTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTAGGGCAGGTCAGTTTTaGAAACTTAATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: WLSRSGKHIRLCWVKGKARAGQF*KLNEVV
Trigger: GACTACCTCATTAAGTTTTCAAAACTGACCTGCCCT...AGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: RRQLASAEAEGRRVLAVWTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...CCATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTACTTTCAAAATAGCCTaGGTTCAGCAATTTAGACAG +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCTFKIA*VQQFRQ
Trigger: CTGTCTAAATTGCTGAACTCAGGCTATTTTGAAAGT...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GGAGATGGCTTGGATTTGGAGATCTCCTGCTTCTTCTGCTCTTCCGGCAGAGTAGAGACTCTGACTCTTTaGCAGATTCAGTCTTCGATA +
Preference number: 4 (lower is better)
Translates to: GDGLDLEISCFFCSSGRVETLTL*QIQSSI
Trigger: TATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTC...TACTCTGCCGGAAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AATCTCCCACCACGAGTACATCCTCTAACAGATCCCCGGCTATTGACAAATGGCTCCTGTTTCTTCTCTTaGCCATCTGGTTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: NLPPRVHPLTDPRLLTNGSCFFS*PSGSVS
Trigger: GCTTACTGAACCAGATGGTCAAGAGAAGAAACAGGA...GCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACTCGTGGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TTGTTCTTTTCGTGGAGGCAGAGGTGCATTAACGTTAAATACTGTCTGCATGGCCATGGGAGTGGTCCATaGCTTGGTGGTGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LFFSWRQRCINVKYCLHGHGSGP*LGGVLF
Trigger: GAACAGAACACCACCAAGTCATGGACCACTCCCATG...GCCATGCAGACAGTATTTAACGTTAATGCACCTCTGCCTCCACGAAAAGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTTGGAGAAACCAAGCAAGCATTTaGGCTACAAGTAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: QLVIWYEACCSYSPGLWRNQASI*ATSNWR
Trigger: TCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTT...TCTCCAAAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTTTGATTGTAGCCAGGTaGATAAGGGGATTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: AGFVTGTSTGVMLRESPCLIVAR*IRGFFY
Trigger: ATAAAAGAATCCCCTTATTCACCTGGCTACAATCAA...ACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp GAAGCTAGTGAAGACGGTTGCTTGCCTGGGGGAATTGCTGCCTCAGGAGTCTCTATTTCCATTGGAAATTaGAGGGAGTCCTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: EASEDGCLPGGIAASGVSISIGN*RESSIS
Trigger: ACTTATAGAGGACTCCCTTCAATTTCCAATGGAAAT...AGAGACTCCTGAGGCAGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGAGAAGGCAACTCGCATCTGCTGAGGCAGAGGGTAGACGTGTACTGGCAGTAGTCAGTTTAGTAAGCTaGACGTTAATACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LRRQLASAEAEGRRVLAVVSLVS*TLIQLR
Trigger: CCTTAACTGTATTAACGTTCAGCTTACTAAACTGAC...TACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp CTGGTCTCCCTGGAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: LVSLEELKNCMIASSFMVTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...GACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAACTGTCTGCATGGCTTaGAAGGGTGCTGTGTTAATG +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGTVCMA*KGAVLM
Trigger: CATTAACACAGCACCCTTTCAAGCCATGCAGACAGT...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR TCA 90 bp AACACAATAGGTTGGTCTAAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTTGCCTCAGGAGTCTCTaGGGTCATAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NTIGWSKVPGARLEVLAACLRSL*GHKLCF
Trigger: GAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCA...AGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433722.6
ENST00000454014.6
ENST00000548676.5
CDS-3UTR TCA 90 bp CAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCACTGGCACAATCAGTCTAACAGATaGGGGGCTGAACTTTTTATA +
Preference number: 4 (lower is better)
Translates to: QRVDVYWQYGGCWICHWHNQSNR*GAELFI
Trigger: TATAAAAAGTTCAGCCCCTCATCTGTTAGACTGATT...GTGCCAGTGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTAGCTTGCTGACTAAGTaGAAGAGTCTTACCAATAAT +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLSLLTK*KSLTNN
Trigger: ATTATTGGTAAGACTCTTTCACTTAGTCAGCAAGCT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR TCA 90 bp CTGAGTAGGTCTGGGAAACACATTCGTCTGTGCTGGGTAAAAGGCAAGGCTACCCTTTGCACAGCTTGCTaGCTAAGTGAAAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSRSGKHIRLCWVKGKATLCTAC*LSERVL
Trigger: TAAGACTCTTTCACTTAGTCAGCAAGCTGTGCAAAG...GGTAGCCTTGCCTTTTACCCAGCACAGACGAATGTGTTTCCCAGACCTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537553.5
CDS-3UTR GCA 90 bp AAAGTTCCAGGGGCCAGATTAGAGGTTCTGGCTGCTGAGAAGGCAACTCGCATCCTCTTGAACATACCCTaGTTTGGATTTAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: KVPGARLEVLAAEKATRILLNIP*FGFRCI
Trigger: GATACACCTAAATCCAAAGCAGGGTATGTTCAAGAG...GATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCTAATCTGGCCCCTGGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GAAGAGCTGAAGAATTGCATGATTGCTAGCAGTTTCATGGTCTGGAGCACCATCGTGTTCTGTTCGCTCTaGATGGAAGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EELKNCMIASSFMVWSTIVFCSL*MEGVQD
Trigger: GTCTTGGACACCTTCCATGCAGAGCGAACAGAACAC...GATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GGGCAGCAGCTGGTCATTTGGTATGAGGCTTGCTGTAGCTACTCCCCAGGACTTATCAGGATGATAATTTaGAGTCTCTTGAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: GQQLVIWYEACCSYSPGLIRMII*SLLRMD
Trigger: GTCCATTCTCAAGAGACTGCAAATTATCATCCTGAT...AAGTCCTGGGGAGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454014.6
CDS-3UTR GCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCATCCACAGGGGTCATaGTACGGGAGTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAHPQGS*YGSLLV
Trigger: GACAAGGAGACTCCCGTAGCATGACCCCTGTGGATG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298892.9
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp TACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGACAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YFHKLLPCADVTISGLPGQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...TCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp AGCTACTTCCATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTCAAGGCATTGTAACTTaGCTGGACTTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SYFHKLLPCADVTISGLPQGIVT*LDLRQS
Trigger: TGACTGCCTCAAGTCCAGGCAAGTTACAATGCCTTG...AGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp GTAGCTACTCCCCAGGACTTTGGAGAAATCTGTGACTGTGATGTTAAAGAGTGTGCTAGTGAAGACGGTTaGTTGCCTGGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: VATPQDFGEICDCDVKECASEDG*LPGGIA
Trigger: AGCAATTCCCCCAGGCAAGCAACCGTCTTCACTAGC...ACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGAGTAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR GCA 90 bp CAGTATGGTGGCTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGATCAGGATGATAATTTaGTGCAGTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: QYGGCWICHWHIHRGHATIRMII*CSLLRM
Trigger: CATTCTCAAGAGACTGCAGCAAATTATCATCCTGAT...CGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCACCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548676.5
CDS-3UTR CCA 90 bp CACAGCTTGACTAGCGAGGCTACATCACAATTTATAAAGTGCCAGATTAGTGCTCCGTGCCCTAATCAGTaGCCCTTGCGCACTTACGTA +
Preference number: 4 (lower is better)
Translates to: HSLTSEATSQFIKCQISAPCPNQ*PLRTYV
Trigger: TACGTAAGTGCGCAAGGGCCACTGATTAGGGCACGG...AGCACTAATCTGGCACTTTATAAATTGTGATGTAGCCTCGCTAGTCAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298892.9
ENST00000454014.6
CDS-3UTR CCA 90 bp ATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGGCATTTTTGGGAACTaGGATACTTTCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: ICHWHIHRGHATGVSLSRGIFGN*DTFKIA
Trigger: GGCTATTTTGAAAGTATCCCAGTTCCCAAAAATGCC...TCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CATAAATTGCTCCCCTGTGCAGACGTAACCATATCTGGTCTCCCTGGAAGAGCTGGTTGTATCTCTGGCTaGGCAAATTCCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: HKLLPCADVTISGLPGRAGCISG*ANSIRD
Trigger: GTCTCTAATGGAATTTGCCCAGCCAGAGATACAACC...AGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp GCTGAGGCAGAGGGTAGACGTGTACTGGCAGTATGGTGGCTGCTGGATTTGTCAACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: AEAEGRRVLAVWWLLDLSTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...TGACAAATCCAGCAGCCACCATACTGCCAGTACACGTCTACCCTCTGCCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395805.6
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CACATCCACAGGGGTCATGCTACGGGAGTCTCCTTGTCCAGAGTCACCACTGTTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: HIHRGHATGVSLSRVTTVTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AACAGTGGTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395805.6
ENST00000417045.5
ENST00000433722.6
ENST00000454014.6
ENST00000537553.5
ENST00000548676.5
CDS-3UTR CCA 90 bp CTGCTGGATTTGTCACTGGCACATCCACAGGGGTCATGCTACGGGAGTCTCCTTACGTTTTGGGAGATTTaGTTTTCTAGCATAATCTGC +
Preference number: 4 (lower is better)
Translates to: LLDLSLAHPQGSCYGSLLTFWEI*FSSIIC
Trigger: GCAGATTATGCTAGAAAACCAAATCTCCCAAAACGT...AAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAG
48% GC, lon