Pregenerated sensors for CAPNS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000256812Ensembl transcript IDs: ENST00000457326.3
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTaGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTTCT | + |
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Preference number: 1 (lower is better) Translates to: GNESCCTGYQQLCTA*QGFQSCPPGRILTS Trigger: AGAAGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| 3UTR CCA 72 bp | AGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTaGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATC | + |
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Preference number: 3 (lower is better) Translates to: SCCTGYQQLCTA*QGFQSCPPGRI Trigger: GATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | TCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTGGTGAAATGCTGCTaGGTGGGAGGCGGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SATVYSLARFSVLSSREDLVKCC*VGGGSG Trigger: TCCAGAACCGCCTCCCACTCAGCAGCATTTCACCAG...ATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | TTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTTCTCAGTTCCCAGGCCTCCACACTGGTaGAATGCTGCTGAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LARFSVLSSREDLDFSVPRPPHW*NAAEWE Trigger: CTCCCACTCAGCAGCATTTCACCAGTGTGGAGGCCT...GGGAACTGAGAAGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CCA 90 bp | CAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCAGTGGGAGGCGGTTCTaGAGTATACTGAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QQLCTAWQGFQSCPPGRISGRRF*SILSCC Trigger: GCAGCAGCTCAGTATACTCCAGAACCGCCTCCCACT...GATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | AGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTAGAGCTCCCCGCAGCTaGGAACTTCCCAGAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: RAVAQGISNCVQLGKVFSRAPRS*ELPRDP Trigger: TGGGTCTCTGGGAAGTTCTCAGCTGCGGGGAGCTCT...ACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| 3UTR CAA 72 bp | GAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTaGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: ELLHRVSATVYS*ARFSVLSSRED Trigger: ATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | TCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTCCAGGGAGGATCTTaGCTTCTCAGTTCCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: SATVYSLARFSVLSSREDLQGGS*LLSSHF Trigger: GAAGTGGGAACTGAGAAGTCAAGATCCTCCCTGGAG...ATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CCA 90 bp | CAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACCCACCTCCATGTCTaGTCCAGCCAGCTGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: QLCTAWQGFQSCPPGRILTHLHV*SSQLCK Trigger: TTTACACAGCTGGCTGGACCAGACATGGAGGTGGGT...CAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | AGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTGGTTCTGGAGTATACTaGGCTGCTGCAGCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: RAVAQGISNCVQLGKVFSGSGVY*AAAASL Trigger: CAGTGAGGCTGCAGCAGCTCAGTATACTCCAGAACC...ACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGAACTTCCTCACTTTCTaGGGCCTCCACACTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LPGNESCCTGYQQLCTAWNFLTF*GLHTGE Trigger: TTCACCAGTGTGGAGGCCTCAGAAAGTGAGGAAGTT...CCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CCA 90 bp | GGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTCCCAGAGACCCAGAATaGTCCCTGTCATACTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: GNESCCTGYQQLCTAWQGPRDPE*SLSYCL Trigger: TAAGCAGTATGACAGGGACCATTCTGGGTCTCTGGG...ACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CCA 90 bp | AGAGCTTGCCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGAGTTGTTCATTTAGCTaGAAGCCTGCGGCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RACQEMRAVAQGISNCVQSCSFS*KPAACR Trigger: TCTGCAGGCCGCAGGCTTCCAGCTAAATGAACAACT...CTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGGCAAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | AGAGCTTGCCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTCTATCCAGAGACTTaGAGGCACGAAACATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RACQEMRAVAQGISNCVQLYPET*RHETWH Trigger: ATGCCATGTTTCGTGCCTTCAAGTCTCTGGATAGAG...CTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGGCAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CCA 90 bp | CCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAATATTCATCAGATCAGTaGCACCCACCTCCATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGNESCCTGYQQLCTAWQYSSDQ*HPPPCL Trigger: CAGACATGGAGGTGGGTGCCACTGATCTGATGAATA...TTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR GCA 90 bp | AAGAGCTTGCCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGGAAATGAGAGCTGTTaGACAGGGTATCAGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: KSLPGNESCCTGYQQLCTGNESC*TGYQQL Trigger: CAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCC...TGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGGCAAGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | GCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTCACACTGCCATTTCTTaGTGTTGTTCCACAGATACT | + |
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Preference number: 4 (lower is better) Translates to: AVAQGISNCVQLGKVFSPHTAIS*CCSTDT Trigger: AGTATCTGTGGAACAACATCAAGAAATGGCAGTGTG...AGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | TTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTTCTCAGTTCCCTCTTTGATAGACACTTaGATCAGGCCATCTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: LARFSVLSSREDLDFSVPSLIDT*IRPSLS Trigger: AGATAGAGATGGCCTGATTCAAGTGTCTATCAAAGA...GGGAACTGAGAAGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR GCA 90 bp | AATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTTGGAGTATACTGAGCTaGTGCAGCCTCACTGATAAA | + |
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Preference number: 4 (lower is better) Translates to: NESCCTGYQQLCTAWQGFWSILS*CSLTDK Trigger: TTTATCAGTGAGGCTGCAGCAGCTCAGTATACTCCA...AAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTAGCTGTGTAAATTGTTaGCGAAATCGCCTAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: RAVAQGISNCVQLGKVFSSCVNC*RNRLTS Trigger: GGAAGTTAGGCGATTTCGGCAACAATTTACACAGCT...ACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR GCA 90 bp | CCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGAATACATGGTCAACTaGAGCCATTCTTTGATAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGNESCCTGYQQLCTAWQEYMVN*SHSLID Trigger: GTCTATCAAAGAATGGCTGCAGTTGACCATGTATTC...TTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR TCA 90 bp | AATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTAAATATGTAGGGTTGTaGAAGAGCTTGCCAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: NESCCTGYQQLCTAWQGFKYVGL*KSLPGN Trigger: ATTTCCTGGCAAGCTCTTTCACAACCCTACATATTT...AAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTAGTTTAACAAGCAAATaGGGCAGCAATCTTAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: RAVAQGISNCVQLGKVFSSLTSK*GSNLRD Trigger: ATCTCTAAGATTGCTGCCGCATTTGCTTGTTAAACT...ACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS TCA 90 bp | TGTTCATTTAGCTGGAAGCCTGCGGCCTGCAGAGCTCCCCGCAGCTaGGAACTTCCCAGAGACCCAGAATGGTCCCTGTCATACTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: CSFSWKPAACRAPRS*ELPRDPEWSLSYCL Trigger: TAAGCAGTATGACAGGGACCATTCTGGGTCTCTGGGAAGTTCTCAGCTGCGGGGAGCTCTGCAGGCCGCAGGCTTCCAGCTAAATGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS TCA 90 bp | CAGCTGTGTAAATTGTTGCCGAAATCGCCTAACTTCCTCACTTTCTaGGGCCTCCACACTGGTGAAATGCTGCTGAGTGGGAGGCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: QLCKLLPKSPNFLTF*GLHTGEMLLSGRRF Trigger: GAACCGCCTCCCACTCAGCAGCATTTCACCAGTGTGGAGGCCTCAGAAAGTGAGGAAGTTAGGCGATTTCGGCAACAATTTACACAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTTCTCAGCCTCCAGGGAGGATCTaGACTTCTCAGTTCCCACTT | + |
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Preference number: 5 (lower is better) Translates to: TAWQGFQSCPPGRILTSQPPGRI*TSQFPL Trigger: AAGTGGGAACTGAGAAGTCAAGATCCTCCCTGGAGG...CTGAGAAGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS GCA 90 bp | GAAATGCTGCTGAGTGGGAGGCGGTTCTGGAGTATACTGAGCTGCTaGAGCCTCACTGATAAAATTCACAATTCCTCCAACTATCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: EMLLSGRRFWSILSC*SLTDKIHNSSNYPS Trigger: GGAGGGATAGTTGGAGGAATTGTGAATTTTATCAGTGAGGCTGCAGCAGCTCAGTATACTCCAGAACCGCCTCCCACTCAGCAGCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS GCA 90 bp | GGTGAAATGCTGCTGAGTGGGAGGCGGTTCTGGAGTATACTGAGCTaGTGCAGCCTCACTGATAAAATTCACAATTCCTCCAACTATCCC | + |
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Preference number: 5 (lower is better) Translates to: GEMLLSGRRFWSILS*CSLTDKIHNSSNYP Trigger: GGGATAGTTGGAGGAATTGTGAATTTTATCAGTGAGGCTGCAGCAGCTCAGTATACTCCAGAACCGCCTCCCACTCAGCAGCATTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | CTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTTCTCTATCCAGAGACTaGAAGGCACGAAACATGGCA | + |
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Preference number: 5 (lower is better) Translates to: LCTAWQGFQSCPPGRILTSLSRD*KARNMA Trigger: TGCCATGTTTCGTGCCTTCAAGTCTCTGGATAGAGA...AGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | CCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGCAACTGTGTACAGCTaGGCAAGGTTTTCAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGNESCCTGYQQLCTAWQATVYS*ARFSVL Trigger: CAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGC...TTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | CTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTCAGCTGTGTAAATTGTaGCCGAAATCGCCTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: LCTAWQGFQSCPPGRILTQLCKL*PKSPNF Trigger: GAAGTTAGGCGATTTCGGCAACAATTTACACAGCTG...AGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | AGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTAGCCAGCTGTGTAAATaGTTGCCGAAATCGCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: RAVAQGISNCVQLGKVFSSQLCK*LPKSPN Trigger: GTTAGGCGATTTCGGCAACAATTTACACAGCTGGCT...ACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATACACACTGCCATTTCTaGATGTTGTTCCACAGATAC | + |
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Preference number: 5 (lower is better) Translates to: SATVYSLARFSVLSSREDTHCHF*MLFHRY Trigger: GTATCTGTGGAACAACATCAAGAAATGGCAGTGTGT...ATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGAAATGAGAGCTGTTGCACAGGGTATCAGCAACTGTGTACAGCTTGGCTTCCAATAGAGCCTTaGCAAGAAACATGCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LPGNESCCTGYQQLCTAWLPIEP*QETCFQ Trigger: CTGAAAGCATGTTTCTTGCAAAGGCTCTATTGGAAG...CCAAGCTGTACACAGTTGCTGATACCCTGTGCAACAGCTCTCATTTCCTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | TATCAGCAACTGTGTACAGCTTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGTTCTTTGATAGACACTaGAATCAGGCCATCTCTATC | + |
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Preference number: 5 (lower is better) Translates to: YQQLCTAWQGFQSCPPGRFFDRH*NQAISI Trigger: GATAGAGATGGCCTGATTCAAGTGTCTATCAAAGAA...CCTCCCTGGAGGACAGGACTGAAAACCTTGCCAAGCTGTACACAGTTGCTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS-3UTR CAA 90 bp | TTGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTTGACTTCTCAGTTCCCTCAGTCTTAAGATCTTaGTGCTTAGAAAGGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: LARFSVLSSREDLDFSVPSVLRS*CLERTL Trigger: CAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGA...GGGAACTGAGAAGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS GCA 90 bp | CTCCGGCAGGTGTCAAGACTAAAACCGTCAGTCTTAAGATCTTTGTaGTTAGAAAGGACTTTGTTGAGAATATTCATCAGATCAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LRQVSRLKPSVLRSL*LERTLLRIFIRSVA Trigger: TGCCACTGATCTGATGAATATTCTCAACAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGACGGTTTTAGTCTTGACACCTGCCGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS TCA 72 bp | AGCTGGAAGCCTGCGGCCTGCAGAGCTCCCCGCAGCTaGGAACTTCCCAGAGACCCAGAATGGTCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SWKPAACRAPRS*ELPRDPEWSLS Trigger: TGACAGGGACCATTCTGGGTCTCTGGGAAGTTCTCAGCTGCGGGGAGCTCTGCAGGCCGCAGGCTTCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CCA 72 bp | CACACTGGTGAAATGCTGCTGAGTGGGAGGCGGTTCTaGAGTATACTGAGCTGCTGCAGCCTCACTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: HTGEMLLSGRRF*SILSCCSLTDK Trigger: TTTATCAGTGAGGCTGCAGCAGCTCAGTATACTCCAGAACCGCCTCCCACTCAGCAGCATTTCACCAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS TCA 72 bp | CTTGAATCAGGCCATCTCTATCTCTATCCAGAGACTTaGAGGCACGAAACATGGCATCCAGGCGGACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LESGHLYLYPET*RHETWHPGGPS Trigger: GCTTGGTCCGCCTGGATGCCATGTTTCGTGCCTTCAAGTCTCTGGATAGAGATAGAGATGGCCTGATTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS GCA 72 bp | CTGCTGAGTGGGAGGCGGTTCTGGAGTATACTGAGCTaGTGCAGCCTCACTGATAAAATTCACAATTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLSGRRFWSILS*CSLTDKIHNSS Trigger: GGAGGAATTGTGAATTTTATCAGTGAGGCTGCAGCAGCTCAGTATACTCCAGAACCGCCTCCCACTCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS GCA 72 bp | ACCTCCATGTCTGGTCCAGCCAGCTGTGTAAATTGTTaGCGAAATCGCCTAACTTCCTCACTTTCTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSMSGPASCVNC*RNRLTSSLSEA Trigger: GGCCTCAGAAAGTGAGGAAGTTAGGCGATTTCGGCAACAATTTACACAGCTGGCTGGACCAGACATGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 72 bp | TGGCAAGGTTTTCAGTCCTGTCCTCCAGGGAGGATCTaGACTTCTCAGTTCCCACTTCAGGAATACATGGTC | + |
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Preference number: 6 (lower is better) Translates to: WQGFQSCPPGRI*TSQFPLQEYMV Trigger: GACCATGTATTCCTGAAGTGGGAACTGAGAAGTCAAGATCCTCCCTGGAGGACAGGACTGAAAACCTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CCA 72 bp | AATATTCATCAGATCAGTGGCACCCACCTCCATGTCTaGTCCAGCCAGCTGTGTAAATTGTTGCCGAAATCG | + |
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Preference number: 6 (lower is better) Translates to: NIHQISGTHLHV*SSQLCKLLPKS Trigger: CGATTTCGGCAACAATTTACACAGCTGGCTGGACCAGACATGGAGGTGGGTGCCACTGATCTGATGAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 90 bp | CAAGAGCTTCTCCAAGACCTCGATCTGCTCCTTCCAATAGAGCCTTaGCAAGAAACATGCTTTCAGTTTAACAAGCAAATGCGGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: QELLQDLDLLLPIEP*QETCFQFNKQMRQQ Trigger: TTGCTGCCGCATTTGCTTGTTAAACTGAAAGCATGTTTCTTGCAAAGGCTCTATTGGAAGGAGCAGATCGAGGTCTTGGAGAAGCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS TCA 72 bp | TACATGGTCAACTGCAGCCATTCTTTGATAGACACTTaGATCAGGCCATCTCTATCTCTATCCAGAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: YMVNCSHSLIDT*IRPSLSLSRDL Trigger: CAAGTCTCTGGATAGAGATAGAGATGGCCTGATTCAAGTGTCTATCAAAGAATGGCTGCAGTTGACCATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 72 bp | CCGTCAGTCTTAAGATCTTTGTGCTTAGAAAGGACTTaGTTGAGAATATTCATCAGATCAGTGGCACCCACC | + |
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Preference number: 6 (lower is better) Translates to: PSVLRSLCLERT*LRIFIRSVAPT Trigger: GGTGGGTGCCACTGATCTGATGAATATTCTCAACAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGACGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 72 bp | TCAGTCTTAAGATCTTTGTGCTTAGAAAGGACTTTGTaGAGAATATTCATCAGATCAGTGGCACCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SVLRSLCLERTL*RIFIRSVAPTS Trigger: GGAGGTGGGTGCCACTGATCTGATGAATATTCTCAACAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 72 bp | ATACATGGTCAACTGCAGCCATTCTTTGATAGACACTaGAATCAGGCCATCTCTATCTCTATCCAGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: IHGQLQPFFDRH*NQAISISIQRL Trigger: AAGTCTCTGGATAGAGATAGAGATGGCCTGATTCAAGTGTCTATCAAAGAATGGCTGCAGTTGACCATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 90 bp | ATGCTCCGGCAGGTGTCAAGACTAAAACCGTCAGTCTTAAGATCTTaGTGCTTAGAAAGGACTTTGTTGAGAATATTCATCAGATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MLRQVSRLKPSVLRS*CLERTLLRIFIRSV Trigger: CACTGATCTGATGAATATTCTCAACAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGACGGTTTTAGTCTTGACACCTGCCGGAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS CAA 72 bp | CAGGTGTCAAGACTAAAACCGTCAGTCTTAAGATCTTaGTGCTTAGAAAGGACTTTGTTGAGAATATTCATC | + |
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Preference number: 6 (lower is better) Translates to: QVSRLKPSVLRS*CLERTLLRIFI Trigger: GATGAATATTCTCAACAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGACGGTTTTAGTCTTGACACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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| CDS GCA 72 bp | GTGTCAAGACTAAAACCGTCAGTCTTAAGATCTTTGTaGTTAGAAAGGACTTTGTTGAGAATATTCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: VSRLKPSVLRSL*LERTLLRIFIR Trigger: TCTGATGAATATTCTCAACAAAGTCCTTTCTAAGCACAAAGATCTTAAGACTGACGGTTTTAGTCTTGACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457326.3 |
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