RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPNS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000126247

Ensembl transcript IDs: ENST00000246533.8, ENST00000586963.1, ENST00000587718.5, ENST00000588780.5, ENST00000588815.5, ENST00000589146.5, ENST00000589162.1, ENST00000590211.5, ENST00000590874.5, ENST00000591041.5, ENST00000592354.5, ENST00000592483.5, ENST00000628018.2, ENST00000628306.2, ENST00000629983.2

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGTGTGCCAGGGCGTGCAGGGACTGGA +
Preference number: 1 (lower is better)
Translates to: GTGAPGSGTVWSLAA*VATVKGVPGRAGTG
Trigger: TCCAGTCCCTGCACGCCCTGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 90 bp GCACAGGTACAGGGGAGAGGTTACGGAGTGGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCC +
Preference number: 1 (lower is better)
Translates to: AQVQGRGYGVGVCRA*WEWGDPWTELVRVS
Trigger: GGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGCACACACCCACTCCGTAACCTCTCCCCTGTACCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 2 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 2 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 2 (lower is better)
Translates to: TWVWHGLELGRLGSNREGGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 2 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR GCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 2 (lower is better)
Translates to: VWHGLELGRLGSNREGCAGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 2 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 2 (lower is better)
Translates to: APGSGTVWSLAAWVATVKGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR GCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR GCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 2 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAAGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAARQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WVWHGLELGRLGSNREGCRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGGAGAGGTTACGGAGTaGGTGTGTGCAGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: VWHGLELGRLGSNREGCAGEVTE*VCAGPG
Trigger: ACCAGGCCCTGCACACACCCACTCCGTAACCTCTCC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 2 (lower is better)
Translates to: WVWHGLELGRLGSNREGCGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 2 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAAGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGGAGAGGTTACGGAGTaGGTGTGTGCAGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPGEVTE*VCAGPG
Trigger: ACCAGGCCCTGCACACACCCACTCCGTAACCTCTCC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR GCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: APGSGTVWSLAAWVATVKPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 2 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR GCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: WVWHGLELGRLGSNREGCPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLARQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 2 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: TWVWHGLELGRLGSNREGGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 2 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 2 (lower is better)
Translates to: VWHGLELGRLGSNREGCAEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTGTGAGGGGGCGGGTCTaGGGCTCCAGTTCAGGAATA +
Preference number: 2 (lower is better)
Translates to: AGPGGNGETRGQSLLECPVRGRV*GSSSGI
Trigger: TATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCAC...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587718.5
3UTR-3UTR GCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 2 (lower is better)
Translates to: TWVWHGLELGRLGSNREGENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 2 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAAEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 2 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 2 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 2 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: VWHGLELGRLGSNREGCALGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: RGQSLLECPRARGNSRQGGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: GGNGETRGQSLLECPRARPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAALGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR GCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LLECPRARGNSRQGKLGPPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 2 (lower is better)
Translates to: AGPGGNGETRGQSLLECPENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 2 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: RGQSLLECPRARGNSRQGLGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR TCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: AGPGGNGETRGQSLLECPLGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 2 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 2 (lower is better)
Translates to: RGQSLLECPRARGNSRQGWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 2 (lower is better)
Translates to: AGPGGNGETRGQSLLECPWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 2 (lower is better)
Translates to: GGNGETRGQSLLECPRARWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGTGTGCCAGGGCGTGCA +
Preference number: 3 (lower is better)
Translates to: APGSGTVWSLAA*VATVKGVPGRA
Trigger: TGCACGCCCTGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp GACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: DKGTGAPGSGTV*SLAAWVATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CAA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATSQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp CAGGGGAGAGGTTACGGAGTGGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: QGRGYGVGVCRA*WEWGDPWTELV
Trigger: AACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGCACACACCCACTCCGTAACCTCTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CAA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTATTGGGCCCTGGATGTaGAGAAGCTGGGTAACAAGT +
Preference number: 3 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRIGPWM*RSWVTS
Trigger: ACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAAT...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CAA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAASQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp GGTTACGGAGTGGGTGTGTGCAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCC +
Preference number: 3 (lower is better)
Translates to: GYGVGVCRAWWE*GDPWTELVRVS
Trigger: GGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGCACACACCCACTCCGTAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTaGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAAC +
Preference number: 3 (lower is better)
Translates to: AEYRQRHWGTWV*HGLELGRLGSN
Trigger: GTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CAA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCATTGGGCCCTGGATGTaGAGAAGCTGGGTAACAAGT +
Preference number: 3 (lower is better)
Translates to: RGQSLLECPRARGNSRQGIGPWM*RSWVTS
Trigger: ACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAAT...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR-3UTR CAA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCC +
Preference number: 3 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELTRGQS*LECPRA
Trigger: GGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGT...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp GTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAGCTGGGTAACAAGTAC +
Preference number: 3 (lower is better)
Translates to: VLEPGGTPGRAN*ALDVEKLGNKY
Trigger: GTACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
3UTR CCA 72 bp AGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTAACAAGTACTGAGAGA +
Preference number: 3 (lower is better)
Translates to: SQGELQAGQIGP*MLRSWVTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGTCGGAGTTGCGGGGTaGGGAGGGGGTACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRVGVAG*GGGTGR
Trigger: CCGGCCCGTACCCCCTCCGCACCCCGCAACTCCGAC...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588815.5
CDS-3UTR TCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCCGCCCCCGGCCCCGCTaGTCAGGCCTCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATRPRPR*SGLQAH
Trigger: ATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCG...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGGGAGTCGGTTCCACTaGCGCTCCCGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGGSRFH*RSRASR
Trigger: GCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCC...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246533.8
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGGGAGTCGGTTCCACTaGCGCTCCCGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPGSRFH*RSRASR
Trigger: GCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246533.8
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCGGAGTAATGTGTGCGTaGGGGCGGGGGCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSGVMCA*GRGLRV
Trigger: AACCCGGAGCCCCCGCCCCCACGCACACATTACTCC...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR GCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTCTCGGGTCGGACACTaGACCGCGGCCCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGSRVGH*TAALLS
Trigger: CGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGA...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGGAGTAATGTGTGCGTaGGGGCGGGGGCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRGVMCA*GRGLRV
Trigger: AACCCGGAGCCCCCGCCCCCACGCACACATTACTCC...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCGGTTTCGCCGGGTCTaGGGGCCGCCAAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVRFRRV*GPPKSE
Trigger: CTCCGACTTTGGCGGCCCCCAGACCCGGCGAAACCG...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588815.5
3UTR CAA 72 bp GGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTGAPGSGTVWS*AAWVATVKGVP
Trigger: TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCGCCCCCGGCCCCGCTaGTCAGGCCTCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPRPRPR*SGLQAH
Trigger: ATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTGGGAGTCGGTTCCACTaGCGCTCCCGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPGSRFH*RSRASR
Trigger: GCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCC...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246533.8
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGCTCCGGGTTGTACTaGGCAGCCGCCTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKGSGLY*AAASLM
Trigger: CATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCC...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCCAGGTGGAACCCTGCTaGCTCAAAGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSQVEPC*LKGTWE
Trigger: CTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTG...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGCGCCAAAGTCGGAGTTaGGGGGTGCGGAGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGRQSRS*GVRRGY
Trigger: GTACCCCCTCCGCACCCCGCAACTCCGACTTTGGCG...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588815.5
CDS-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCACACGTCCGGAGTTCTaGGAGTCGGTTCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSTRPEF*ESVPLP
Trigger: CGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGT...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGAGTAATGTGTGCGTaGGGGCGGGGGCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKGVMCA*GRGLRV
Trigger: AACCCGGAGCCCCCGCCCCCACGCACACATTACTCC...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGGAGTAATGTGTGCGTaGGGGCGGGGGCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCAGVMCA*GRGLRV
Trigger: AACCCGGAGCCCCCGCCCCCACGCACACATTACTCC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCAGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSWSLAA*VATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCA...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTAGGCACTGGGGCACCTaGGTCTGGCACGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGRHWGT*VWHGLE
Trigger: CTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGAGGCACTGGGGCACCTaGGTCTGGCACGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKRHWGT*VWHGLE
Trigger: CTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCCGCCCCCGGCCCCGCTaGTCAGGCCTCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGRPRPR*SGLQAH
Trigger: ATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCG...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGGCTCCGGGTTGTACTaGGCAGCCGCCTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPGSGLY*AAASLM
Trigger: CATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTTGGAGTAATGTGTaGGTGGGGGCGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGCWSNV*VGAGAP
Trigger: CGGAGCCCCCGCCCCCACGCACACATTACTCCAACA...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR GCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGAGCACCAGCCCCTTTaGCCTCACCCAGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPEHQPL*PHPGTA
Trigger: AGCCGTCCCTGGGTGAGGGCAAAGGGGCTGGTGCTC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587718.5
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCTCGGGTCGGACACTaGACCGCGGCCCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSRVGH*TAALLS
Trigger: CGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTACACGTCCGGAGTTCTaGGAGTCGGTTCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRTRPEF*ESVPLP
Trigger: CGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGT...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCGCCTAGGATGCGCATaGCCGTTCCACCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRRLGCA*PFHRHR
Trigger: GCGGTGGCGGTGGAACGGCCATGCGCATCCTAGGCG...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAGGGGGCGGGTCTaGGGCTCCAGTTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATVRGRV*GSSSGI
Trigger: TATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCAC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTAGGCACTGGGGCACCTaGGTCTGGCACGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCRHWGT*VWHGLE
Trigger: CTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCGCCCCCGGCCCCGCTaGTCAGGCCTCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARRPRPR*SGLQAH
Trigger: ATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGAGGGCGGGGCCGGTaGCTCAGGCCGCAACTCTCG +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPGGRGR*LRPQLS
Trigger: CGAGAGTTGCGGCCTGAGTCACCGGCCCCGCCCTCC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACAGGAGGGCGGGGCCGGTaGCTCAGGCCGCAACTCTCG +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTGGRGR*LRPQLS
Trigger: CGAGAGTTGCGGCCTGAGTCACCGGCCCCGCCCTCC...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGTTGGAGTAATGTGTaGGTGGGGGCGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAACWSNV*VGAGAP
Trigger: CGGAGCCCCCGCCCCCACGCACACATTACTCCAACA...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR GCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTCAGGTGGAACCCTGCTaGCTCAAAGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGQVEPC*LKGTWE
Trigger: CTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTG...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTCAGGTGGAACCCTGCTaGCTCAAAGGCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCQVEPC*LKGTQA
Trigger: GGCCTGGGTGCCTTTGAGGCAGCAGGGTTCCACCTG...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629983.2
CDS-3UTR CCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTACACGTCCGGAGTTCTaGGAGTCGGTTCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGTRPEF*ESVPLP
Trigger: CGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGT...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGGAGTAATGTGTGCGTaGGGGCGGGGGCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPGVMCA*GRGLRV
Trigger: AACCCGGAGCCCCCGCCCCCACGCACACATTACTCC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVWSLAA*VATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCA...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCAWSLAA*VATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCA...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPGSGTV*SLAAWV
Trigger: TACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTGGGGCACCTGGGTCTaGCACGGTCTGGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRWGTWV*HGLELG
Trigger: GCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTAGCCCAGCTTGCCTGTaGTGTCGCTCTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCSPACL*CRSGGR
Trigger: CCTCCCACCAGAGCGACACCACAGGCAAGCTGGGCT...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628018.2
CDS-3UTR CCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCACGACTCACATGGATCTaGGGGGCTCCTGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPRLTWI*GAPEAE
Trigger: CTCGGCCTCAGGAGCCCCCCAGATCCATGTGAGTCG...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588815.5
CDS-3UTR TCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTCGCCCCCGGCCCCGCTaGTCAGGCCTCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELRPRPR*SGLQAH
Trigger: ATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCG...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCACTGCAAATGGTCCCTaGTCGGTCAGTGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSTANGP*SVSVEL
Trigger: CAGTTCGACACTGACCGATCAGGGACCATTTGCAGT...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCGCTGGTATGAAGGGCTaGGGGGTGGGGTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGAGMKG*GVGSSQ
Trigger: CTGGGAGGACCCCACCCCTCAGCCCTTCATACCAGC...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587718.5
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTGTTGGAGTAATGTGTaGGTGGGGGCGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPCWSNV*VGAGAP
Trigger: CGGAGCCCCCGCCCCCACGCACACATTACTCCAACA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR GCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTGTTGGAGTAATGTGTaGGTGGGGGCGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRCWSNV*VGAGAP
Trigger: CGGAGCCCCCGCCCCCACGCACACATTACTCCAACA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR GCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCACAGGTGGAACCCTGCTaGCTCAAAGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPQVEPC*LKGTWE
Trigger: CTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTG...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGTGAGGGGGCGGGTCTaGGGCTCCAGTTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCVRGRV*GSSSGI
Trigger: TATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCAC...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGGAGAGGTTACGGAGTaGGTGTGTGCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCGEVTE*VCAGPG
Trigger: ACCAGGCCCTGCACACACCCACTCCGTAACCTCTCC...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGGSGTV*SLAAWV
Trigger: TACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPGSGTV*SLAAWV
Trigger: TACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGGCACTGGGGCACCTaGGTCTGGCACGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPRHWGT*VWHGLE
Trigger: CTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTAGCCCAGCTTGCCTGTaGTGTCGCTCTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSPACL*CRSGGR
Trigger: CCTCCCACCAGAGCGACACCACAGGCAAGCTGGGCT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588780.5
ENST00000628018.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGAGGAGGGTGGAGAGTaGGGACAGGGAACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPEEGGE*GQGTPR
Trigger: TCTTGGGGTTCCCTGTCCTCACTCTCCACCCTCCTC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587718.5
CDS-3UTR GCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGCCATCACGGCCACCATaGTGCGACATGTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKPSRPP*CDMCQC
Trigger: GCATTGACACATGTCGCAGCATGGTGGCCGTGATGG...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCCTGGGAGTTCACTACTaGAAATGGTCCCTGATCGGT +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSLGVHY*KWSLIG
Trigger: ACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAG...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCAGGTGGAACCCTGCTaGCTCAAAGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPQVEPC*LKGTWE
Trigger: CTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCAPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAGCTGCAGCCACTCCTaGATGTTCACCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSSCSHS*MFTWIC
Trigger: ACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCT...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCGTGAGGGGGCGGGTCTaGGGCTCCAGTTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRVRGRV*GSSSGI
Trigger: TATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCAC...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGTGAGGGGGCGGGTCTaGGGCTCCAGTTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPVRGRV*GSSSGI
Trigger: TATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCAC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGACAGGATCGGCCCTaGGAGAGACCGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPRQDRP*ERPRLQ
Trigger: CTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCT...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLAGSGTV*SLAAWV
Trigger: TACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCAGGCACTGGGGCACCTaGGTCTGGCACGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLARHWGT*VWHGLE
Trigger: CTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCGAGTGTCCTCAATGTTaGAGTAATGTGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSECPQC*SNVCVG
Trigger: CCCCACGCACACATTACTCCAACATTGAGGACACTC...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590211.5
3UTR CAA 72 bp GGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGGNGETRGQS*LECPRARGNSR
Trigger: CCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGACTGCAAATGGTCCCTaGTCGGTCAGTGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGTANGP*SVSVEL
Trigger: CAGTTCGACACTGACCGATCAGGGACCATTTGCAGT...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGACTGCAAATGGTCCCTaGTCGGTCAGTGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKTANGP*SVSVEL
Trigger: CAGTTCGACACTGACCGATCAGGGACCATTTGCAGT...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTGGCCCCACAAAGATGTaGCTGCAGACAGGATCGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPGPTKM*LQTGSA
Trigger: GGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCC...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCACCATCACGGCCACCATaGTGCGACATGTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPPSRPP*CDMCQC
Trigger: GCATTGACACATGTCGCAGCATGGTGGCCGTGATGG...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCCAGGTGGAACCCTGCTaGCTCAAAGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGQVEPC*LKGTWE
Trigger: CTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTG...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCACCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAAPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTAACCAGGAACATGGCTaGGACTCACGCCGCACACGT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPNQEHG*DSRRTR
Trigger: ACGTGTGCGGCGTGAGTCGCAGCCATGTTCCTGGTT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590874.5
CDS-3UTR GCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAACCAGGAACATGGCTaGGACTCACATGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCANQEHG*DSHGSG
Trigger: CCCAGATCCATGTGAGTCGCAGCCATGTTCCTGGTT...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588815.5
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTACACGTCCGGAGTTCTaGGAGTCGGTTCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGTRPEF*ESVPLP
Trigger: CGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGT...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTAGCTGCAGCCACTCCTaGATGTTCACCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRSCSHS*MFTWIC
Trigger: ACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCT...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGTGTGTGCAGGGCCTaGTGGGAATGGGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPGVCRA*WEWGDP
Trigger: CGGGTCTCCCCATTCCCACCAGGCCCTGCACACACC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTGGAGAGGTTACGGAGTaGGTGTGTGCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGGEVTE*VCAGPG
Trigger: ACCAGGCCCTGCACACACCCACTCCGTAACCTCTCC...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPWSLAA*VATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCA...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPGSGTV*SLAAWV
Trigger: TACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGGTCTGGCACGGTCTaGAGCTTGGCCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELGSGTV*SLAAWV
Trigger: TACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTTGGGGCACCTGGGTCTaGCACGGTCTGGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELWGTWV*HGLELG
Trigger: GCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACATGGGGCACCTGGGTCTaGCACGGTCTGGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTWGTWV*HGLELG
Trigger: GCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTAGGCACTGGGGCACCTaGGTCTGGCACGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPRHWGT*VWHGLE
Trigger: CTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTCACCCAGGGACGGCTaGCAAAATAGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRSPRDG*QNRRKG
Trigger: CCCCTTCCTCCTATTTTGCCAGCCGTCCCTGGGTGA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587718.5
CDS-3UTR TCA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTTGGCCTGCCACCTTTTaGTGTTGTTCCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRWPATF*CCSTST
Trigger: AGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCA...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTGTTGGAGTAATGTGTaGGTGGGGGCGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLCWSNV*VGAGAP
Trigger: CGGAGCCCCCGCCCCCACGCACACATTACTCCAACA...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCCATCACGGCCACCATaGTGCGACATGTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPPSRPP*CDMCQC
Trigger: GCATTGACACATGTCGCAGCATGGTGGCCGTGATGG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCCATCACGGCCACCATaGTGCGACATGTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRPSRPP*CDMCQC
Trigger: GCATTGACACATGTCGCAGCATGGTGGCCGTGATGG...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTATTCAGGTGGAACCCTaGTGCCTCAAAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPIQVEP*CLKGTW
Trigger: CCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAAT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATEYIVS*SHSWMF
Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGGTGTGCCAGGGCGTaGAGGGACTGGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELGCARA*RDWSHP
Trigger: AGGATGACTCCAGTCCCTGCACGCCCTGGCACACCC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTTCACTACTGCAAATaGTCCCTGATCGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATVHYCK*SLIGQC
Trigger: ACACTGACCGATCAGGGACCATTTGCAGTAGTGAAC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGAGCTGCAGCCACTCCTaGATGTTCACCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKSCSHS*MFTWIC
Trigger: ACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCT...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLRAWWE*GDPWTE
Trigger: CTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCT...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGGAGAGGTTACGGAGTaGGTGTGTGCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLAGEVTE*VCAGPG
Trigger: ACCAGGCCCTGCACACACCCACTCCGTAACCTCTCC...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLAWSLAA*VATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCA...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCCTGTGGTGTCGCTCTaGTGGGAGGGTGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPPVVSL*WEGVKK
Trigger: CTTCTTAACACCCTCCCACCAGAGCGACACCACAGG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588780.5
ENST00000628018.2
CDS-3UTR TCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGGCCTGCCACCTTTTaGTGTTGTTCCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGWPATF*CCSTST
Trigger: AGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCA...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTTGGCCTGCCACCTTTTaGTGTTGTTCCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGWPATF*CCSTST
Trigger: AGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCA...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTACTGCAAATGGTCCCTaGTCGGTCAGTGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPTANGP*SVSVEL
Trigger: CAGTTCGACACTGACCGATCAGGGACCATTTGCAGT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCACTGCAAATGGTCCCTaGTCGGTCAGTGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRTANGP*SVSVEL
Trigger: CAGTTCGACACTGACCGATCAGGGACCATTTGCAGT...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: APGSGTVWSLAAWVATVKLCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCCTGGGAGTTCACTACTaGAAATGGTCCCTGATCGGT +
Preference number: 4 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAALGVHY*KWSLIG
Trigger: ACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAG...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTATTCAGGTGGAACCCTaGTGCCTCAAAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPIQVEP*CLKGTW
Trigger: CCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAAT...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCCCTGGATTTGTCCAGTaGCATCTTTGTCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSPGFVQ*HLCQEI
Trigger: AATCTCTTGACAAAGATGGCACTGGACAAATCCAGG...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTCCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCGTTGGCCTCAATGTTaGAGTAATGTGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPRWPQC*SNVCVG
Trigger: CCCCACGCACACATTACTCCAACATTGAGGCCAACG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGTTCACTACTGCAAATaGTCCCTGATCGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCAVHYCK*SLIGQC
Trigger: ACACTGACCGATCAGGGACCATTTGCAGTAGTGAAC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTGAGGGGGCGGGTCTaGGGCTCCAGTTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELVRGRV*GSSSGI
Trigger: TATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCAC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAAENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGAGAGGTTACGGAGTaGGTGTGTGCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELGEVTE*VCAGPG
Trigger: ACCAGGCCCTGCACACACCCACTCCGTAACCTCTCC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTTGGAGCTTGGCCGCCTaGGTAGCAACCGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELWSLAA*VATVKG
Trigger: ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCA...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGTGGTGTCGCTCTGGTaGGAGGGTGTTAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPVVSLW*EGVKKS
Trigger: ACTCTTCTTAACACCCTCCCACCAGAGCGACACCAC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588780.5
ENST00000628018.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCGTGGTGTCGCTCTGGTaGGAGGGTGTTAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRVVSLW*EGVKKS
Trigger: ACTCTTCTTAACACCCTCCCACCAGAGCGACACCAC...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628018.2
CDS-3UTR TCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAAVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAALCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGLGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCTGGGAGTTCACTACTaGAAATGGTCCCTGATCGGT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPLGVHY*KWSLIG
Trigger: ACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCCGTTGGCCTCAATGTTaGAGTAATGTGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGRWPQC*SNVCVG
Trigger: CCCCACGCACACATTACTCCAACATTGAGGCCAACG...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTAGCTGCAGCCACTCCTaGATGTTCACCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSCSHS*MFTWIC
Trigger: ACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTGGCCTGCCACCTTTTaGTGTTGTTCCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPWPATF*CCSTST
Trigger: AGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTGGCCTGCCACCTTTTaGTGTTGTTCCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRWPATF*CCSTST
Trigger: AGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCACTGCAAATGGTCCCTaGTCGGTCAGTGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLATANGP*SVSVEL
Trigger: CAGTTCGACACTGACCGATCAGGGACCATTTGCAGT...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCACTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTCTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPLCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: WVWHGLELGRLGSNREGCLGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTCCATCACGGCCACCATaGTGCGACATGTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPPSRPP*CDMCQC
Trigger: GCATTGACACATGTCGCAGCATGGTGGCCGTGATGG...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCTGTTTGTATATGGCCTaGCACCTTTTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATCLYMA*HLLMLF
Trigger: GAACAACATCAAAAGGTGGCAGGCCATATACAAACA...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCCTGGGAGTTCACTACTaGAAATGGTCCCTGATCGGT +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGLGVHY*KWSLIG
Trigger: ACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAG...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTCTGGGAGTTCACTACTaGAAATGGTCCCTGATCGGT +
Preference number: 4 (lower is better)
Translates to: AGPGGNGETRGQSLLECPLGVHY*KWSLIG
Trigger: ACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAG...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTATTCAGGTGGAACCCTaGTGCCTCAAAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPIQVEP*CLKGTW
Trigger: CCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAAT...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGATTCAGGTGGAACCCTaGTGCCTCAAAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLIQVEP*CLKGTW
Trigger: CCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAAT...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTGGATTTGTCCAGTaGCATCTTTGTCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVPGFVQ*HLCQEI
Trigger: AATCTCTTGACAAAGATGGCACTGGACAAATCCAGG...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGCCTGGATTTGTCCAGTaGCATCTTTGTCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: TWVWHGLELGRLGSNREGPGFVQ*HLCQEI
Trigger: AATCTCTTGACAAAGATGGCACTGGACAAATCCAGG...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPEYIVS*SHSWMF
Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: YRQRHWGTWVWHGLELGREYIVS*SHSWMF
Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACACCACAAAGATGTGACTaGAGACAGGATCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTPQRCD*RQDRPW
Trigger: CCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGG...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGATTCAGGTGGAACCCTaGTGCCTCAAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLIQVEP*CLKGTQ
Trigger: CTGGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAAT...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629983.2
CDS-3UTR CCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCGTTGGCCTCAATGTTaGAGTAATGTGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARRWPQC*SNVCVG
Trigger: CCCCACGCACACATTACTCCAACATTGAGGCCAACG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGTTCACTACTGCAAATaGTCCCTGATCGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPVHYCK*SLIGQC
Trigger: ACACTGACCGATCAGGGACCATTTGCAGTAGTGAAC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCAWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGCCAGGCAGGGCAAATTaGGCCCTGGATGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLPGRAN*ALDVEK
Trigger: CTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGG...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTTATAGACAAAGGCACTaGGGCACCTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELYRQRH*GTWVWH
Trigger: GTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGCCTGTGGTGTCGCTCTaGTGGGAGGGTGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLPVVSL*WEGVKK
Trigger: CTTCTTAACACCCTCCCACCAGAGCGACACCACAGG...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628018.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGLCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPLGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTGTTTGTATATGGCCTaGCACCTTTTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VWHGLELGRLGSNREGCACLYMA*HLLMLF
Trigger: GAACAACATCAAAAGGTGGCAGGCCATATACAAACA...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGTGTTTGTATATGGCCTaGCACCTTTTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVCLYMA*HLLMLF
Trigger: GAACAACATCAAAAGGTGGCAGGCCATATACAAACA...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGAATACATAGTCAGCTaGAGCCACTGGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPEYIVS*SHWGEE
Trigger: CTCCTCTCCCCAGTGGCTGCAGCTGACTATGTATTC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587718.5
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGCGTTGGCCTCAATGTTaGAGTAATGTGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLRWPQC*SNVCVG
Trigger: CCCCACGCACACATTACTCCAACATTGAGGCCAACG...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CCA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCGTTCACTACTGCAAATaGTCCCTGATCGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RGQSLLECPRARGNSRQGVHYCK*SLIGQC
Trigger: ACACTGACCGATCAGGGACCATTTGCAGTAGTGAAC...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACAGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGGCAAATTGGGCCCTaGATGTTGAGAAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELGQIGP*MLRSWV
Trigger: TACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGAATGGGGAGACCCGTaGACAGAGCTTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPEWGDP*TELVRV
Trigger: CACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTCTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARLCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACACTGGGAGTTCACTACTaGAAATGGTCCCTGATCGGT +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTLGVHY*KWSLIG
Trigger: ACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAG...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTCCTGGATTTGTCCAGTaGCATCTTTGTCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPPGFVQ*HLCQEI
Trigger: AATCTCTTGACAAAGATGGCACTGGACAAATCCAGG...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACAAGATGCTCATTCAGGTaGAACCCTGCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTRCSFR*NPAASK
Trigger: CTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCT...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTAGCTGCAGCCACTCCTaGATGTTCACCTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELSCSHS*MFTWIC
Trigger: ACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCT...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGAGAACAAAAGCTTGTaGGTCAGCAGGCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: LLECPRARGNSRQGKLGPENKSL*VSRPHK
Trigger: TTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTC...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTGGCCTGCCACCTTTTaGTGTTGTTCCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLWPATF*CCSTST
Trigger: AGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCA...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACAGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTTCCCACTTTCATCTaGGTAGCGTCGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELVPTFI*VASDDH
Trigger: ATGATCATCCGACGCTACTCAGATGAAAGTGGGAAC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLLCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTCTTTGTCAAGAGATTTaGAGGCACGGAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELLCQEI*RHGTWR
Trigger: ACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAG...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARLGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCCTGGGTAACAAGTACTaGGAGAACAAAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLALGNKY*ENKSLW
Trigger: CCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAG...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTGTTTGTATATGGCCTaGCACCTTTTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPCLYMA*HLLMLF
Trigger: GAACAACATCAAAAGGTGGCAGGCCATATACAAACA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELEYIVS*SHSWMF
Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACAGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTEYIVS*SHSWMF
Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTTCACTACTGCAAATaGTCCCTGATCGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELVHYCK*SLIGQC
Trigger: ACACTGACCGATCAGGGACCATTTGCAGTAGTGAAC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR TCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGCTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR TCA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTCTGAGTAGCGTCGGATaGTCATGTTATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELLSSVG*SCYRDA
Trigger: AGCATCTCTATAACATGATCATCCGACGCTACTCAG...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTTGTTTGTATATGGCCTaGCACCTTTTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PGGTPGRANWALDVEKLGCLYMA*HLLMLF
Trigger: GAACAACATCAAAAGGTGGCAGGCCATATACAAACA...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR GCA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGCCTGGATTTGTCCAGTaGCATCTTTGTCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: GGNGETRGQSLLECPRARPGFVQ*HLCQEI
Trigger: AATCTCTTGACAAAGATGGCACTGGACAAATCCAGG...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCTGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLAWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGCCTGGATTTGTCCAGTaGCATCTTTGTCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLPGFVQ*HLCQEI
Trigger: AATCTCTTGACAAAGATGGCACTGGACAAATCCAGG...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CCA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACATGGATGTTGAGAAGCTaGGTAACAAGTACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTWMLRS*VTSTER
Trigger: TCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCA...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR GCA 90 bp CAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGTGTTTGTATATGGCCTaGCACCTTTTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QNIDKGTGAPGSGTVWSLCLYMA*HLLMLF
Trigger: GAACAACATCAAAAGGTGGCAGGCCATATACAAACA...CAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS TCA 90 bp GCTCCCGGGCCTCCCGCAGCGTCCGGCTCCGGAGGGCGGGGCCGGTaGCTCAGGCCGCAACTCTCGGGTCGGACACTGCACCGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: APGPPAASGSGGRGR*LRPQLSGRTLHRGP
Trigger: AGGGCCGCGGTGCAGTGTCCGACCCGAGAGTTGCGGCCTGAGTCACCGGCCCCGCCCTCCGGAGCCGGACGCTGCGGGAGGCCCGGGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589146.5
ENST00000628018.2
ENST00000628306.2
CDS GCA 90 bp ACTCACTGCGCCGCACACGTCCGGAGTTCTGGGAGTCGGTTCCACTaGCGCTCCCGGGCCTCCCGCAGCGTCCGGCTCCGGAGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: THCAAHVRSSGSRFH*RSRASRSVRLRRAG
Trigger: CCCCGCCCTCCGGAGCCGGACGCTGCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGTGCGGCGCAGTGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000589146.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGGCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATGGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR CAA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGGCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: VWHGLELGRLGSNREGCAGGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR CAA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGGGCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVGGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCC...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
CDS-3UTR CAA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSGTVWS*AAWVAT
Trigger: GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCC...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS GCA 90 bp GTGACTCAGGCCGCAACTCTCGGGTCGGACACTGCACCGCGGCCCTaGTGTCGCCCGCGCGGTCCTAGAGCCGAAGCGGACATTGCGCAT +
Preference number: 5 (lower is better)
Translates to: VTQAATLGSDTAPRP*CRPRGPRAEADIAH
Trigger: ATGCGCAATGTCCGCTTCGGCTCTAGGACCGCGCGGGCGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGAGTTGCGGCCTGAGTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589146.5
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGGCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPGGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CAA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATGTVWS*AAWVAT
Trigger: GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCC...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: VWHGLELGRLGSNREGCAGTVWS*AAWVAT
Trigger: GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590874.5
ENST00000628306.2
CDS-3UTR CAA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTCCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRSGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGGA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628306.2
CDS-3UTR CAA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: GGNGETRGQSLLECPRARGGGSG*YCAAAS
Trigger: CGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCC...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
CDS-3UTR CAA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCACCGCCAAAGTCGGAGTaGCGGGGTGCGGAGGGGGTA +
Preference number: 5 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPPPKSE*RGAEGV
Trigger: TACCCCCTCCGCACCCCGCAACTCCGACTTTGGCGG...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588815.5
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPGTVWS*AAWVAT
Trigger: GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: PGGTPGRANWALDVEKLGGTVWS*AAWVAT
Trigger: GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCC...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGSSKPS*PVVSLW
Trigger: CCAGAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628018.2
CDS TCA 90 bp GCGACTCACTCTGGCTCTGTGGGCTCGGGTCTAAGATCGTGGCTGTaGGCTCTGGGTTCCCGGACAATGGGGTTCCCCGCTGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: ATHSGSVGSGLRSWL*ALGSRTMGFPAGTG
Trigger: CCCAGTTCCAGCGGGGAACCCCATTGTCCGGGAACCCAGAGCTCACAGCCACGATCTTAGACCCGAGCCCACAGAGCCAGAGTGAGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592483.5
CDS-3UTR CAA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC +
Preference number: 5 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVSSKPS*PVVSLS
Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628306.2
CDS-3UTR CAA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC +
Preference number: 5 (lower is better)
Translates to: TWVWHGLELGRLGSNREGSSKPS*PVVSLS
Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628306.2
CDS-3UTR CAA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCATTGGGCCCTGGATGTaGAGAAGCTGGGTAACAAGT +
Preference number: 5 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSIGPWM*RSWVTS
Trigger: ACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAAT...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp ACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: TWVWHGLELGRLGSNREGTRGQS*LECPRA
Trigger: GGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGT...CCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGTRGQS*LECPRA
Trigger: GGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGT...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: VWHGLELGRLGSNREGCASQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GCAGAATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCACGGTCTGGAGCTaGGCCGCCTGGGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: AEYRQRHWGTWVWHGLELGTVWS*AAWVAT
Trigger: GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCC...AAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSSKPS*PVVSLW
Trigger: CCAGAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588780.5
ENST00000628018.2
CDS-3UTR CAA 90 bp AGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCACCCGTGGACAGAGCTaGTTAGAGTGTCCTCAATGT +
Preference number: 5 (lower is better)
Translates to: RHWGTWVWHGLELGRLGSTRGQS*LECPQC
Trigger: ACATTGAGGACACTCTAACAAGCTCTGTCCACGGGT...GCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590211.5
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSSKPS*PVVSLS
Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590874.5
ENST00000628306.2
CDS-3UTR CAA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: WVWHGLELGRLGSNREGCTRGQS*LECPRA
Trigger: GGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGT...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPTRGQS*LECPRA
Trigger: GGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGT...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: WVWHGLELGRLGSNREGCSQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS CCA 90 bp CAGGGGAGAGGTTACGGAGTGGGTGTGTGCAGGGCCTGGTGGGAATaGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: QGRGYGVGVCRAWWE*GDPWTELVRVSSML
Trigger: CAACATTGAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGCACACACCCACTCCGTAACCTCTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590211.5
CDS-3UTR CAA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC +
Preference number: 5 (lower is better)
Translates to: GGNGETRGQSLLECPRARSSKPS*PVVSLS
Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628306.2
CDS-3UTR CAA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGTCAGTGTCGAACTGTTaGTATATGGCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVSVSNC*YMACHL
Trigger: AAGGTGGCAGGCCATATACAAACAGTTCGACACTGA...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: VWHGLELGRLGSNREGCASLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTTCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGSLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGTCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: GSGTVWSLAAWVATVKGVSLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...CACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTTGTCCAGTGCCATCTTaGTCAAGAGATTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: WGTWVWHGLELGRLGSNRCPVPS*SRDLKA
Trigger: TGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA...ACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp ACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCTGTCCAGTGCCATCTTaGTCAAGAGATTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: TGAPGSGTVWSLAAWVATCPVPS*SRDLKA
Trigger: TGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA...GGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCGATGTTCACCTGGATTaGTCCAGTGCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: VWHGLELGRLGSNREGCADVHLD*SSAIFV
Trigger: GACAAAGATGGCACTGGACAAATCCAGGTGAACATC...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAATTGGGCCCTGGATGTaGAGAAGCTGGGTAACAAGT +
Preference number: 5 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPIGPWM*RSWVTS
Trigger: ACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAAT...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTACCCGTGGACAGAGCTaGTTAGAGTGTCCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: PGGTPGRANWALDVEKLGTRGQS*LECPRA
Trigger: GGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGT...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACATCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC +
Preference number: 5 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTSSKPS*PVVSLS
Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628306.2
CDS-3UTR CAA 90 bp TGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTTCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: WVWHGLELGRLGSNREGCSLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...ACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp ATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: IDKGTGAPGSGTVWSLAASLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGTGTCCAGTGCCATCTTaGTCAAGAGATTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: APGSGTVWSLAAWVATVKCPVPS*SRDLKA
Trigger: TGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA...CTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCAGATGTTCACCTGGATTaGTCCAGTGCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SGTVWSLAAWVATVKGVPDVHLD*SSAIFV
Trigger: GACAAAGATGGCACTGGACAAATCCAGGTGAACATC...TGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTATTGGGCCCTGGATGTaGAGAAGCTGGGTAACAAGT +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPIGPWM*RSWVTS
Trigger: ACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAAT...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: GGNGETRGQSLLECPRARSQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCTCACAAGTGCTAGGCTaGGCACAGGTACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLASQVLG*AQVQGR
Trigger: TCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGA...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000590211.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS TCA 90 bp CCAAGTTGGCGTAAGGCGTTCCCGACATGTCTGGGCGCTAGAATGTaGGATCCAGAGCCCAGCCTGAATGTAGAGGTCCTTGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PSWRKAFPTCLGARM*DPEPSLNVEVLGRS
Trigger: TGACCTGCCAAGGACCTCTACATTCAGGCTGGGCTCTGGATCTCACATTCTAGCGCCCAGACATGTCGGGAACGCCTTACGCCAACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS TCA 90 bp AGCCGCCTCGCTTTAACGTTCATCTCCAGGTTAGCCAATGCAGGCTaGGCCCAGACCCATAAGCCCCACCCGCCAAAACTCCACATCAGT +
Preference number: 5 (lower is better)
Translates to: SRLALTFISRLANAG*AQTHKPHPPKLHIS
Trigger: ACTGATGTGGAGTTTTGGCGGGTGGGGCTTATGGGTCTGGGCTCAGCCTGCATTGGCTAACCTGGAGATGAACGTTAAAGCGAGGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592354.5
CDS CCA 90 bp GGTTGTACTGCGCAGCCGCCTCGCCCATTAGGTCTTGCTTCCTCCTaGGCTCACCTCCTCATTAACCCACCTAAAACCTCTGACCACACT +
Preference number: 5 (lower is better)
Translates to: GCTAQPPRPLGLASS*AHLLINPPKTSDHT
Trigger: AGTGTGGTCAGAGGTTTTAGGTGGGTTAATGAGGAGGTGAGCCCAGGAGGAAGCAAGACCTAATGGGCGAGGCGGCTGCGCAGTACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586963.1
CDS-3UTR CAA 90 bp TATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCTCAGTGTCGAACTGTTaGTATATGGCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: YRQRHWGTWVWHGLELGRSVSNC*YMACHL
Trigger: AAGGTGGCAGGCCATATACAAACAGTTCGACACTGA...GCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCAGTGTCGAACTGTTaGTATATGGCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSVSNC*YMACHL
Trigger: AAGGTGGCAGGCCATATACAAACAGTTCGACACTGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPSLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTGATGTTCACCTGGATTaGTCCAGTGCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPDVHLD*SSAIFV
Trigger: GACAAAGATGGCACTGGACAAATCCAGGTGAACATC...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTATTGGGCCCTGGATGTaGAGAAGCTGGGTAACAAGT +
Preference number: 5 (lower is better)
Translates to: AGPGGNGETRGQSLLECPIGPWM*RSWVTS
Trigger: ACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAAT...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTGTGCCTGCCACCTTTTGATGTaGTTCCACAAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: VWHGLELGRLGSNREGCACHLLM*FHKYLN
Trigger: ATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCA...GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp CCTGGGTCTGGCACGGTCTGGAGCTTGGCCGCCTGGGTAGCAACCGTGAAGGGTTGCCACCTTTTGATGTaGTTCCACAAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: PGSGTVWSLAAWVATVKGCHLLM*FHKYLN
Trigger: ATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCA...ACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp GCAGGGCCTGGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTTCAGTGTCGAACTGTTaGTATATGGCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: AGPGGNGETRGQSLLECPSVSNC*YMACHL
Trigger: AAGGTGGCAGGCCATATACAAACAGTTCGACACTGA...AGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTGTCCAGTGCCATCTTaGTCAAGAGATTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPCPVPS*SRDLKA
Trigger: TGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTGATGTTCACCTGGATTaGTCCAGTGCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: PGGTPGRANWALDVEKLGDVHLD*SSAIFV
Trigger: GACAAAGATGGCACTGGACAAATCCAGGTGAACATC...ACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCTCAGTGTCGAACTGTTaGTATATGGCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLASVSNC*YMACHL
Trigger: AAGGTGGCAGGCCATATACAAACAGTTCGACACTGA...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGTCAGTGTCGAACTGTTaGTATATGGCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: GGNGETRGQSLLECPRARSVSNC*YMACHL
Trigger: AAGGTGGCAGGCCATATACAAACAGTTCGACACTGA...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGATGTTCACCTGGATTaGTCCAGTGCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: GGNGETRGQSLLECPRARDVHLD*SSAIFV
Trigger: GACAAAGATGGCACTGGACAAATCCAGGTGAACATC...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCGATGTTCACCTGGATTaGTCCAGTGCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLADVHLD*SSAIFV
Trigger: GACAAAGATGGCACTGGACAAATCCAGGTGAACATC...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS GCA 90 bp CGCTCTGGTGGGAGGGTGTTAAGAAGAGTGACAGCTACACCCAGATaGATGCATCACATGCACTGTGGACACGATGGTGATACAGCAAGC +
Preference number: 5 (lower is better)
Translates to: RSGGRVLRRVTATPR*MHHMHCGHDGDTAS
Trigger: GCTTGCTGTATCACCATCGTGTCCACAGTGCATGTGATGCATGCATCTGGGTGTAGCTGTCACTCTTCTTAACACCCTCCCACCAGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589162.1
CDS-3UTR CAA 90 bp TGTGACTGCAGACAGGATCGGCCCTGGGAGAGACCGAGGCTCCAGGTGACTCCTTGCCACCTTTTGATGTaGTTCCACAAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: CDCRQDRPWERPRLQVTPCHLLM*FHKYLN
Trigger: ATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCA...AGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588780.5
ENST00000588815.5
ENST00000590874.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp GGGGAACTCCAGGCAGGGCAAATTGGGCCCTGGATGTTGAGAAGCTGGGTAACATCTTTGTCAAGAGATTaGAAGGCACGGAACATGGCG +
Preference number: 5 (lower is better)
Translates to: GELQAGQIGPWMLRSWVTSLSRD*KARNMA
Trigger: CGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGA...TGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp GGTGGGAATGGGGAGACCCGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGTGTCCAGTGCCATCTTaGTCAAGAGATTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GGNGETRGQSLLECPRARCPVPS*SRDLKA
Trigger: TGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA...CCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp CGTGGACAGAGCTTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCTGCCACCTTTTGATGTaGTTCCACAAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: RGQSLLECPRARGNSRQGCHLLM*FHKYLN
Trigger: ATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCA...GCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTTGTCCAGTGCCATCTTaGTCAAGAGATTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LLECPRARGNSRQGKLGPCPVPS*SRDLKA
Trigger: TGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
ENST00000629983.2
CDS-3UTR CAA 90 bp AATATAGACAAAGGCACTGGGGCACCTGGGTCTGGCACGGTCTGGAGCTTGGCCTGCCACCTTTTGATGTaGTTCCACAAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: NIDKGTGAPGSGTVWSLACHLLM*FHKYLN
Trigger: ATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCA...GGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS-3UTR CAA 90 bp TTGTTAGAGTGTCCTAGAGCCAGGGGGAACTCCAGGCAGGGCAAATTGGGCCCTTGCCACCTTTTGATGTaGTTCCACAAGTACTTGAAT +
Preference number: 5 (lower is better)
Translates to: LLECPRARGNSRQGKLGPCHLLM*FHKYLN
Trigger: ATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCA...AGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246533.8
ENST00000587718.5
ENST00000588815.5
ENST00000628018.2
ENST00000628306.2
CDS GCA 72 bp GCCGCACACGTCCGGAGTTCTGGGAGTCGGTTCCACTaGCGCTCCCGGGCCTCCCGCAGCGTCCGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: AAHVRSSGSRFH*RSRASRSVRLR
Trigger: CCGGAGCCGGACGCTGCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGTGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000589146.5
ENST00000628018.2
ENST00000628306.2
CDS GCA 72 bp GCCGCAACTCTCGGGTCGGACACTGCACCGCGGCCCTaGTGTCGCCCGCGCGGTCCTAGAGCCGAAGCGGAC +
Preference number: 6 (lower is better)
Translates to: AATLGSDTAPRP*CRPRGPRAEAD
Trigger: GTCCGCTTCGGCTCTAGGACCGCGCGGGCGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGAGTTGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589146.5
CDS CCA 72 bp GGCTGCGACTCACTGCGCCGCACACGTCCGGAGTTCTaGGAGTCGGTTCCACTGCCGCTCCCGGGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: GCDSLRRTRPEF*ESVPLPLPGLP
Trigger: CGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGTGCGGCGCAGTGAGTCGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246533.8
ENST00000589146.5
ENST00000628018.2
ENST00000628306.2
CDS CAA 72 bp GCTGTCGCCCGCGCGGTCCTAGAGCCGAAGCGGACATaGCGCATGCGCACCCCACACCGCCCGGCTAGCTGG +
Preference number: 6 (lower is better)
Translates to: AVARAVLEPKRT*RMRTPHRPASW
Trigger: CCAGCTAGCCGGGCGGTGTGGGGTGCGCATGCGCAATGTCCGCTTCGGCTCTAGGACCGCGCGGGCGACAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589146.5
CDS GCA 72 bp GCGCTGACCTCCATGTCCGGGGGCTCCGGGTTGTACTaGGCAGCCGCCTCGCTGATGGCGCTGATGACTCCG +
Preference number: 6 (lower is better)
Translates to: ALTSMSGGSGLY*AAASLMALMTP
Trigger: CGGAGTCATCAGCGCCATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGGACATGGAGGTCAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590874.5
ENST00000628306.2
CDS CCA 72 bp GCTCCTGAGGCCGAGACTTCACGGTTTCGCCGGGTCTaGGGGCCGCCAAAGTCGGAGTTGCGGGGTGCGGAG +
Preference number: 6 (lower is better)
Translates to: APEAETSRFRRV*GPPKSELRGAE
Trigger: CTCCGCACCCCGCAACTCCGACTTTGGCGGCCCCCAGACCCGGCGAAACCGTGAAGTCTCGGCCTCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588815.5
CDS CAA 72 bp GGGAGGAATCTGAAGCCTCCGGGTGGGGGTCTGAGTTaGCGAGGGCGGGTTGTCCGCGGATGGGTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: GRNLKPPGGGLS*RGRVVRGWVGQ
Trigger: CTGCCCCACCCATCCGCGGACAACCCGCCCTCGCAAACTCAGACCCCCACCCGGAGGCTTCAGATTCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS CAA 72 bp TCTGTGGCGCTGACCTCCATGTCCGGGGGCTCCGGGTaGTACTGCGCAGCCGCCTCGCTGATGGCGCTGATG +
Preference number: 6 (lower is better)
Translates to: SVALTSMSGGSG*YCAAASLMALM
Trigger: CATCAGCGCCATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGGACATGGAGGTCAGCGCCACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590874.5
ENST00000628306.2
CDS CAA 90 bp CTCACTGCTGGGAGGAATCTGAAGCCTCCGGGTGGGGGTCTGAGTTaGCGAGGGCGGGTTGTCCGCGGATGGGTGGGGCAGGTATGGGGG +
Preference number: 6 (lower is better)
Translates to: LTAGRNLKPPGGGLS*RGRVVRGWVGQVWG
Trigger: CCCCCATACCTGCCCCACCCATCCGCGGACAACCCGCCCTCGCAAACTCAGACCCCCACCCGGAGGCTTCAGATTCCTCCCAGCAGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS CCA 72 bp GCGACTCACTGCTGGGAGGAATCTGAAGCCTCCGGGTaGGGGTCTGAGTTTGCGAGGGCGGGTTGTCCGCGG +
Preference number: 6 (lower is better)
Translates to: ATHCWEESEASG*GSEFARAGCPR
Trigger: CCGCGGACAACCCGCCCTCGCAAACTCAGACCCCCACCCGGAGGCTTCAGATTCCTCCCAGCAGTGAGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS CAA 72 bp TGCAACCTCCTCAGGTCTAAAAGGCACCCGTGGGGCTaGAGGGAGCCTGGACTGGGTGCACGCGTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: CNLLRSKRHPWG*REPGLGARVKG
Trigger: CCCCTTCACGCGTGCACCCAGTCCAGGCTCCCTCAAGCCCCACGGGTGCCTTTTAGACCTGAGGAGGTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS TCA 72 bp TCTGGCTCTGTGGGCTCGGGTCTAAGATCGTGGCTGTaGGCTCTGGGTTCCCGGACAATGGGGTTCCCCGCT +
Preference number: 6 (lower is better)
Translates to: SGSVGSGLRSWL*ALGSRTMGFPA
Trigger: AGCGGGGAACCCCATTGTCCGGGAACCCAGAGCTCACAGCCACGATCTTAGACCCGAGCCCACAGAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592483.5
CDS CCA 72 bp CGAGGGCGGGTTGTCCGCGGATGGGTGGGGCAGGTATaGGGGATCAGGTTTGCAACCTCCTCAGGTCTAAAA +
Preference number: 6 (lower is better)
Translates to: RGRVVRGWVGQV*GIRFATSSGLK
Trigger: TTTTAGACCTGAGGAGGTTGCAAACCTGATCCCCCATACCTGCCCCACCCATCCGCGGACAACCCGCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS CCA 72 bp GCGCAGCCGCCTCGCCCATTAGGTCTTGCTTCCTCCTaGGCTCACCTCCTCATTAACCCACCTAAAACCTCT +
Preference number: 6 (lower is better)
Translates to: AQPPRPLGLASS*AHLLINPPKTS
Trigger: AGAGGTTTTAGGTGGGTTAATGAGGAGGTGAGCCCAGGAGGAAGCAAGACCTAATGGGCGAGGCGGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586963.1
CDS TCA 72 bp CGTAAGGCGTTCCCGACATGTCTGGGCGCTAGAATGTaGGATCCAGAGCCCAGCCTGAATGTAGAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: RKAFPTCLGARM*DPEPSLNVEVL
Trigger: AAGGACCTCTACATTCAGGCTGGGCTCTGGATCTCACATTCTAGCGCCCAGACATGTCGGGAACGCCTTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591041.5
CDS TCA 72 bp GCTTTAACGTTCATCTCCAGGTTAGCCAATGCAGGCTaGGCCCAGACCCATAAGCCCCACCCGCCAAAACTC +
Preference number: 6 (lower is better)
Translates to: ALTFISRLANAG*AQTHKPHPPKL
Trigger: GAGTTTTGGCGGGTGGGGCTTATGGGTCTGGGCTCAGCCTGCATTGGCTAACCTGGAGATGAACGTTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592354.5
CDS CAA 72 bp CCGCCAAAACTCCACATCAGTCCCCTCAGGACCACATaGTCCTGGTCCCACACAATCAGACTACTCCCATAT +
Preference number: 6 (lower is better)
Translates to: PPKLHISPLRTT*SWSHTIRLLPY
Trigger: ATATGGGAGTAGTCTGATTGTGTGGGACCAGGACAATGTGGTCCTGAGGGGACTGATGTGGAGTTTTGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592354.5
CDS GCA 72 bp GGGAGGGTGTTAAGAAGAGTGACAGCTACACCCAGATaGATGCATCACATGCACTGTGGACACGATGGTGAT +
Preference number: 6 (lower is better)
Translates to: GRVLRRVTATPR*MHHMHCGHDGD
Trigger: ATCACCATCGTGTCCACAGTGCATGTGATGCATGCATCTGGGTGTAGCTGTCACTCTTCTTAACACCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589162.1