RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN9 (Homo sapiens)

Ensembl gene IDs: ENSG00000135773

Ensembl transcript IDs: ENST00000271971.7, ENST00000354537.1, ENST00000366666.6, ENST00000480004.1

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCCCCTTAAGGGAGAAGGCCGGACGATaGGAGGGGAGTGAACCCTGG +
Preference number: 2 (lower is better)
Translates to: VMPEPGCKAQVAPSAPLREKAGR*EGSEPW
Trigger: CCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTC...CCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
3UTR-3UTR TCA 90 bp GTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCCCCTTAAGGCTTCCCAGATCAAGATaGAGGGAGAAGGCCGGACGA +
Preference number: 2 (lower is better)
Translates to: VMPEPGCKAQVAPSAPLRLPRSR*REKAGR
Trigger: TCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAG...CCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
3UTR-3UTR TCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATCACCAAGAGAAGTTCTaGAGGTCAAGGTCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNHQEKF*RSRSRS
Trigger: GCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTG...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
3UTR-3UTR CCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACA +
Preference number: 2 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPKPRFS*AGCIST
Trigger: TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTT...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
3UTR-3UTR CCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACA +
Preference number: 2 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVKPRFS*AGCIST
Trigger: TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTT...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
3UTR-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACA +
Preference number: 2 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVKPRFS*AGCIST
Trigger: TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTT...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
3UTR-3UTR TCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAAACGATGAGAGGGGAGTaGACCCTGGGCGTAATGGTT +
Preference number: 2 (lower is better)
Translates to: SSTKSESVAEFISFFPDQTMRGE*TLGVMV
Trigger: AACCATTACGCCCAGGGTTCACTCCCCTCTCATCGT...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
3UTR-3UTR TCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGATCAGAGAGTGTAGCTaGGTTCATTTCATTCTTCCC +
Preference number: 2 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLIRECS*VHFILP
Trigger: GGGAAGAATGAAATGAACTCAGCTACACTCTCTGAT...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
3UTR TCA 72 bp AAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTaGACCCTGGGCGTAATGGTTCCACACCAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: KMKGEGRTMRGE*TLGVMVPHQEK
Trigger: CTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
3UTR TCA 72 bp ACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTaGAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGG +
Preference number: 3 (lower is better)
Translates to: TLGVMVPHQEKF*RSRSRSQDSAG
Trigger: CCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCCCCTTAAGGGGCATGGCTGCTCCCTaGAAGGCTGGCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VMPEPGCKAQVAPSAPLRGMAAP*KAGLGP
Trigger: CGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCC...CCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCGGCAGCCCCCAGCCGTaGAGCCGCGAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCGSPQP*SREPSF
Trigger: GAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTGCC...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAGGCAGCCCCCAGCCGTaGAGCCGCGAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTGSPQP*SREPSF
Trigger: GAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTGCC...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATGAGAAGGCCGGACGATaGGAGGGGAGTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNEKAGR*EGSEPW
Trigger: CCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTC...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCGGCCTGAGGAGTGGGTaGTCCGGGCGTCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVGLRSG*SGRPWE
Trigger: TTCCCAAGGACGCCCGGATCACCCACTCCTCAGGCC...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCAAACCAAGCGGTCCCTaGAGGTGGGCAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSAKPSGP*RWAGGH
Trigger: ATGACCGCCTGCCCACCTTCAGGGACCGCTTGGTTT...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCCCCCAGGGGGCAGCTTaGACCGGTCGGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVPQGAA*TGRRLL
Trigger: GAGAAGTCTCCGACCGGTTCAAGCTGCCCCCTGGGG...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGAGPGS*GSHRSP
Trigger: TGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGC...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGGAGGTAAGGCATGGCTaGTCCCTGGAAGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGEVRHG*SLEGWL
Trigger: AAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTC...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCACTTGGGAACCGGGTGTaGCTGAGGCCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWALGNRV*LRPWGP
Trigger: CGGGCCCCAGGGCCTCAGGCACACCCGGTTCCCAAG...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGACTCCAGCTTCCCATTaGCGCTGGTGTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGTPASH*RWCPSG
Trigger: CCCTGATGGACACCAGCGGCAATGGGAAGCTGGAGT...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCCCCTTAAGGCTGAGCACAATCAGCTaGAGGAGGTGGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VMPEPGCKAQVAPSAPLRLSTIS*RRWLLS
Trigger: GCTGAGCAGCCACCTCCTGCAGCTGATTGTGCTCAG...CCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATCCTGGAAGGCTGGCTTaGGTCCGGCAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNPGRLA*VRQWME
Trigger: TTCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGG...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCACTCTGGCCTGAGGAGTaGGTGATCCGGGCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSLWPEE*VIRASL
Trigger: CAAGGACGCCCGGATCACCCACTCCTCAGGCCAGAG...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGCCCCAGGGGGCAGCTTaGACCGGTCGGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKPQGAA*TGRRLL
Trigger: GAGAAGTCTCCGACCGGTTCAAGCTGCCCCCTGGGG...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCGAGAAGGCCGGACGATaGGAGGGGAGTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCEKAGR*EGSEPW
Trigger: CCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTC...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCATCCTCAAACAGGGTaGCTCTCTGCAGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGHPQTG*LSAGTP
Trigger: AGGAGTGCCTGCAGAGAGGCACCCTGTTTGAGGATG...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATTGGCCTCGATGGCGCTaGCTCCCTTCAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNWPRWR*LPSELH
Trigger: ATGAAGCTCTGAAGGGAGGCAGCGCCATCGAGGCCA...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAAGGTATCCAGGAAATTaGGGCAGCCCCCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSRYPGN*GSPQPW
Trigger: CCACGGCTGGGGGCTGCCGCAATTTCCTGGATACCT...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGGCTCAGCTGAAAGCCTaGAGCTTTCAGTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGAQLKA*SFQCSP
Trigger: CGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGC...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGTGCTCCCTGGAAGGCTaGCTTGGGTCCGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLCSLEG*LGSGSG
Trigger: TCCACTGCCGGACCCAAGCCAGCCTTCCAGGGAGCA...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGGCCTGAGGAGTGGGTaGTCCGGGCGTCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGGLRSG*SGRPWE
Trigger: TTCCCAAGGACGCCCGGATCACCCACTCCTCAGGCC...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAACCAAGCGGTCCCTaGAGGTGGGCAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLKPSGP*RWAGGH
Trigger: ATGACCGCCTGCCCACCTTCAGGGACCGCTTGGTTT...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGTTCCGGATTCGGATaGGCTCGATTCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPGSGFG*ARFSGL
Trigger: GAGGCCAGAGAATCGAGCTCATCCGAATCCGGAACC...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCCGAACCCAGCTTCCCTaGTGGACCGTCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVRTQLP*WTVTSH
Trigger: ATGGGAGGTGACGGTCCATCAGGGAAGCTGGGTTCG...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCCGAACCCAGCTTCCCTaGTGGACCGTCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCIRTQLP*WTVTSH
Trigger: ATGGGAGGTGACGGTCCATCAGGGAAGCTGGGTTCG...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCACCCCAGGGGGCAGCTTaGACCGGTCGGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAPQGAA*TGRRLL
Trigger: GAGAAGTCTCCGACCGGTTCAAGCTGCCCCCTGGGG...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCACGATGAGAGGGGAGTaGACCCTGGGCGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSATMRGE*TLGVMV
Trigger: AACCATTACGCCCAGGGTTCACTCCCCTCTCATCGT...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCGAGAAGGCCGGACGATaGGAGGGGAGTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVEKAGR*EGSEPW
Trigger: CCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTC...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGACTTGGGAACCGGGTGTaGCTGAGGCCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRLGNRV*LRPWGP
Trigger: CGGGCCCCAGGGCCTCAGGCACACCCGGTTCCCAAG...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAAGGTATCCAGGAAATTaGGGCAGCCCCCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTRYPGN*GSPQPW
Trigger: CCACGGCTGGGGGCTGCCGCAATTTCCTGGATACCT...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAAGAGCCCGAAACCGCTaGTCCTCCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTRARNR*SSSVSW
Trigger: CCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCT...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAGAGCCCGAAACCGCTaGTCCTCCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVRARNR*SSSVSW
Trigger: CCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCT...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATGCTCAGCTGAAAGCCTaGAGCTTTCAGTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNAQLKA*SFQCSP
Trigger: CGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGC...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCTGCTCCCTGGAAGGCTaGCTTGGGTCCGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVCSLEG*LGSGSG
Trigger: TCCACTGCCGGACCCAAGCCAGCCTTCCAGGGAGCA...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCATGGCTGCTCCCTaGAAGGCTGGCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAGMAAP*KAGLGP
Trigger: CGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCC...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGCTCTGGCCTGAGGAGTaGGTGATCCGGGCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQLWPEE*VIRASL
Trigger: CAAGGACGCCCGGATCACCCACTCCTCAGGCCAGAG...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGACAGGGAGGAATTGCTaGCTGGGAAGTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGTGRNC*LGSLHP
Trigger: AGGATGCAGACTTCCCAGCCAGCAATTCCTCCCTGT...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATTCTCCCAGCTCTCCCTaGCAGATATCAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNSPSSP*QISVLV
Trigger: CACCAGGACTGATATCTGCCAGGGAGAGCTGGGAGA...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGATGAGCTCGATTCTCTaGCCTCGGAAGCTTACCTGG +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGMSSIL*PRKLTW
Trigger: CCAGGTAAGCTTCCGAGGCCAGAGAATCGAGCTCAT...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATCTGGTCAGGTGGAGTTaGCTTTGGAGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNLVRWS*LWRLRK
Trigger: CTTCCTGAGCCTCCAAAGCCAACTCCACCTGACCAG...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATGTGCTGCCAGAACCCTaGTCGTTTCCACACAAAGGG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNVLPEP*SFPHKG
Trigger: CCCTTTGTGTGGAAACGACCAGGGTTCTGGCAGCAC...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366666.6
CDS-3UTR TCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGAAACCAAGCGGTCCCTaGAGGTGGGCAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRKPSGP*RWAGGH
Trigger: ATGACCGCCTGCCCACCTTCAGGGACCGCTTGGTTT...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCTCATCCAGAGCAGTGTaGCACAGACGCTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSASSRAV*HRRFCS
Trigger: TGAGCAGAAGCGTCTGTGTCACACTGCTCTGGATGA...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271971.7
CDS-3UTR TCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGAGPGS*GSHRSP
Trigger: TGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGC...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGAAGCGAGCTGTGTGTaGCGGTCAAGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSEASCV*RSRRNS
Trigger: GCTGTTCCTTCTTGACCGGCACACACAGCTCGCTTC...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271971.7
CDS-3UTR GCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAGAGGTAAGGCATGGCTaGTCCCTGGAAGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTEVRHG*SLEGWL
Trigger: AAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTC...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCGAGGTAAGGCATGGCTaGTCCCTGGAAGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGEVRHG*SLEGWL
Trigger: AAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTC...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTTGGGAACCGGGTGTaGCTGAGGCCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALELGNRV*LRPWGP
Trigger: CGGGCCCCAGGGCCTCAGGCACACCCGGTTCCCAAG...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGGCCTCGATGGCGCTaGCTCCCTTCAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGWPRWR*LPSELH
Trigger: ATGAAGCTCTGAAGGGAGGCAGCGCCATCGAGGCCA...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGAGGTATCCAGGAAATTaGGGCAGCCCCCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKRYPGN*GSPQPW
Trigger: CCACGGCTGGGGGCTGCCGCAATTTCCTGGATACCT...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCTGAGCACAATCAGCTaGAGGAGGTGGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLLSTIS*RRWLLS
Trigger: GCTGAGCAGCCACCTCCTGCAGCTGATTGTGCTCAG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCGGTAGAGGTAAGGCATaGCTGCTCCCTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVGRGKA*LLPGRL
Trigger: CAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACC...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACACCAGGGCCAAAGCTTTaGTCCTGGGGGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTPGPKL*SWGMTL
Trigger: CAGAGTCATCCCCCAGGACCAAAGCTTTGGCCCTGG...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCTGTGCTGCCAGAACTaGAAATGGAATATCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGLCCQN*KWNIPA
Trigger: TGCCGGGATATTCCATTTCCAGTTCTGGCAGCACAG...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGTCACCTCCCATTTGTaGATCGCGTCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPVTSHL*IASSSR
Trigger: CCTGGAGGAAGACGCGATCCACAAATGGGAGGTGAC...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATGGGGCTCAAAAGTGCTaGGAATCAGGATGTACTCCC +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNGAQKC*ESGCTP
Trigger: GGGAGTACATCCTGATTCCCAGCACTTTTGAGCCCC...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGCCTGAGGAGTGGGTaGTCCGGGCGTCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRGLRSG*SGRPWE
Trigger: TTCCCAAGGACGCCCGGATCACCCACTCCTCAGGCC...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCCACTTCTGGTATCAATaGAGCAGCCCAGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCHFWYQ*SSPAGS
Trigger: GCTCCCTGCTGGGCTGCTTCATTGATACCAGAAGTG...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACACACTTCTGGTATCAATaGAGCAGCCCAGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTHFWYQ*SSPAGS
Trigger: GCTCCCTGCTGGGCTGCTTCATTGATACCAGAAGTG...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAAGGTGGCTGCTCAGCTaGAAGCCTGCAGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTRWLLS*KPAAFS
Trigger: ACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCT...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCCCTCATCCGCATACCTaGGCACAATCAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCPHPHT*AQSAAG
Trigger: TCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGG...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCCCTCATCCGCATACCTaGGCACAATCAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCIPHPHT*AQSAAG
Trigger: TCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGG...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKAGPGS*GSHRSP
Trigger: TGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGC...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCACGATGAGAGGGGAGTaGACCCTGGGCGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVTMRGE*TLGVMV
Trigger: AACCATTACGCCCAGGGTTCACTCCCCTCTCATCGT...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCCTTCCCAGATCAAGATaGAGGGAGAAGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGLPRSR*REKAGR
Trigger: TCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAG...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCTTCCCAGATCAAGATaGAGGGAGAAGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLLPRSR*REKAGR
Trigger: TCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCGCCCCCTTAAGGCAGTaGCTTTACAAAGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSAAPLRQ*LYKGVA
Trigger: TGCTACTCCTTTGTAAAGTCACTGCCTTAAGGGGGC...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCACACTCCTGCCTCATTTaGTCAAAGCTCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSHSCLI*SKLWPE
Trigger: CTCAGGCCAGAGCTTTGAGCAAATGAGGCAGGAGTG...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTCTCTGCAGGCACTCCTaGCTCATTTGCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPLCRHS*LICSKL
Trigger: GAGCTTTGAGCAAATGAGGCAGGAGTGCCTGCAGAG...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACACATCCTCAAACAGGGTaGCTCTCTGCAGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTHPQTG*LSAGTP
Trigger: AGGAGTGCCTGCAGAGAGGCACCCTGTTTGAGGATG...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCATCCTCAAACAGGGTaGCTCTCTGCAGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLHPQTG*LSAGTP
Trigger: AGGAGTGCCTGCAGAGAGGCACCCTGTTTGAGGATG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCAGAACAGGGAGGAATTaGTGGCTGGGAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSARTGRN*WLGSLH
Trigger: ATGCAGACTTCCCAGCCAGCAATTCCTCCCTGTTCT...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATGGTGGGGCTCAAAAGTaGTGGGAATCAGGATGTACT +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNGGAQK*WESGCT
Trigger: AGTACATCCTGATTCCCAGCACTTTTGAGCCCCACC...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAAGAGCCCGAAACCGCTaGTCCTCCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWARARNR*SSSVSW
Trigger: CCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCT...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGTTCAGCTGGGCAGGCTaGATCTCTACAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLFSWAG*ISTRQP
Trigger: AGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAA...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGCCTGGAAGGCTGGCTTaGGTCCGGCAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGPGRLA*VRQWME
Trigger: TTCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGG...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGTCTCCCAGCTCTCCCTaGCAGATATCAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLSPSSP*QISVLV
Trigger: CACCAGGACTGATATCTGCCAGGGAGAGCTGGGAGA...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACACCAAAGCTTTGGTCCTaGGGGATGACTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTPKLWS*GMTLAS
Trigger: ACTGGCCAGAGTCATCCCCCAGGACCAAAGCTTTGG...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGCTTCCATGGCCTCGATaGCGCTGCCTCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGLPWPR*RCLPSE
Trigger: CTCTGAAGGGAGGCAGCGCCATCGAGGCCATGGAAG...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCACGCTTCTGCTCAGCTaGACCAACAGAACGCCACTC +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCTLLLS*TNRTPL
Trigger: GAGTGGCGTTCTGTTGGTCCAGCTGAGCAGAAGCGT...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAGTCACCTCCCATTTGTaGATCGCGTCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTVTSHL*IASSSR
Trigger: CCTGGAGGAAGACGCGATCCACAAATGGGAGGTGAC...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCAGGTGGAGTTGGCTTTaGAGGCTCAGGAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSARWSWL*RLRKVN
Trigger: ATTGACCTTCCTGAGCCTCCAAAGCCAACTCCACCT...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCTGGTCAGGTGGAGTTaGCTTTGGAGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLLVRWS*LWRLRK
Trigger: CTTCCTGAGCCTCCAAAGCCAACTCCACCTGACCAG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTTCATCGAAGTCCAGCTaGAGCTCCTCATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPSSKSS*SSSSAY
Trigger: GTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGA...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCTGGCCCCTCCAAGAATaGATTCTGGGTTTTTCACGA +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSAWPLQE*ILGFSR
Trigger: TCGTGAAAAACCCAGAATTCATTCTTGGAGGGGCCA...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCTCATCCAGAGCAGTGTaGCACAGACGCTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVSSRAV*HRRFCS
Trigger: TGAGCAGAAGCGTCTGTGTCACACTGCTCTGGATGA...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS-3UTR TCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTCACCAAGAGAAGTTCTaGAGGTCAAGGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPHQEKF*RSRSRS
Trigger: GCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTG...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGACGATGAGAGGGGAGTaGACCCTGGGCGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRTMRGE*TLGVMV
Trigger: AACCATTACGCCCAGGGTTCACTCCCCTCTCATCGT...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGCTTCCCAGATCAAGATaGAGGGAGAAGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQLPRSR*REKAGR
Trigger: TCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAG...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCGAAGCGAGCTGTGTGTaGCGGTCAAGAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVEASCV*RSRRNS
Trigger: GCTGTTCCTTCTTGACCGGCACACACAGCTCGCTTC...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS-3UTR GCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCCTCTGCAGGCACTCCTaGCTCATTTGCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCLCRHS*LICSKL
Trigger: GAGCTTTGAGCAAATGAGGCAGGAGTGCCTGCAGAG...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAGTTTGGAAGGTCTCTaGCACACCCCCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLSLEGL*HTPSEV
Trigger: GACTTCACTGGGGGTGTGGCAGAGACCTTCCAAACT...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCAGTTTGGAAGGTCTCTaGCACACCCCCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCISLEGL*HTPSEV
Trigger: GACTTCACTGGGGGTGTGGCAGAGACCTTCCAAACT...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCACCGGGCCTCAGATTCTaGAGCACTTCTGGTATCAAT +
Preference number: 4 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSPGLRF*STSGIN
Trigger: ATTGATACCAGAAGTGCTGCAGAATCTGAGGCCCGG...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATAAACTACACTCCTCCTaGCCCTCATCTTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNKLHSS*PSSFSV
Trigger: GACTGAGAAAGATGAGGGGCAGGAGGAGTGTAGTTT...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATATACTCAAGTTCCTCTaGTGTCACCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNILKFL*CHLHVL
Trigger: GAGGACATGGAGGTGACAGCAGAGGAACTTGAGTAT...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCGCTCAGCTGAAAGCCTaGAGCTTTCAGTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVAQLKA*SFQCSP
Trigger: CGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGC...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCACTGAGCACAATCAGCTaGAGGAGGTGGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWALSTIS*RRWLLS
Trigger: GCTGAGCAGCCACCTCCTGCAGCTGATTGTGCTCAG...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATCTTGAAGTCCTTAAATaGCATCCTGTCGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNLEVLK*HPVAPR
Trigger: TCGTGGAGCGACAGGATGGCATTTAAGGACTTCAAG...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354537.1
CDS-3UTR GCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGAGCCACTCACTGTGCTaGCAGAACCCTGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRSHSLC*QNPGRF
Trigger: GAAACGACCAGGGTTCTGGCAGCACAGTGAGTGGCT...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366666.6
CDS-3UTR CCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAGGCATGGCTGCTCCCTaGAAGGCTGGCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALEGMAAP*KAGLGP
Trigger: CGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCC...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGTAGAGGTAAGGCATaGCTGCTCCCTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAGRGKA*LLPGRL
Trigger: CAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACC...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGGTAGAGGTAAGGCATaGCTGCTCCCTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGGRGKA*LLPGRL
Trigger: CAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACC...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCACAGGGAGGAATTGCTaGCTGGGAAGTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVTGRNC*LGSLHP
Trigger: AGGATGCAGACTTCCCAGCCAGCAATTCCTCCCTGT...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTCCTCGGAAGCTTACCTaGTCAATTCCCGTTACACTG +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPPRKLT*SIPVTL
Trigger: CAGTGTAACGGGAATTGACCAGGTAAGCTTCCGAGG...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGGGGGCTCAAAAGTGCTaGGAATCAGGATGTACTCCC +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLGAQKC*ESGCTP
Trigger: GGGAGTACATCCTGATTCCCAGCACTTTTGAGCCCC...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGCTGGTCAGGTGGAGTTaGCTTTGGAGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQLVRWS*LWRLRK
Trigger: CTTCCTGAGCCTCCAAAGCCAACTCCACCTGACCAG...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCATCGAAGTCCAGCTaGAGCTCCTCATCCGCATAC +
Preference number: 4 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCISSKSS*SSSSAY
Trigger: GTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGA...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTTTGTACTGAGAGCCTaGAACACCCGGCTCGCATTC +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGFVLRA*NTRLAF
Trigger: GAATGCGAGCCGGGTGTTCCAGGCTCTCAGTACAAA...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGTTTGTACTGAGAGCCTaGAACACCCGGCTCGCATTC +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLFVLRA*NTRLAF
Trigger: GAATGCGAGCCGGGTGTTCCAGGCTCTCAGTACAAA...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATATGACTGGAGCTACATaGAAGTCAGGATTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNMTGAT*KSGFCA
Trigger: CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCAT...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCACACTTCTGGTATCAATaGAGCAGCCCAGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAHFWYQ*SSPAGS
Trigger: GCTCCCTGCTGGGCTGCTTCATTGATACCAGAAGTG...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGACGAACCCAGCTTCCCTaGTGGACCGTCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRRTQLP*WTVTSH
Trigger: ATGGGAGGTGACGGTCCATCAGGGAAGCTGGGTTCG...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCGAGAAGCGTGGTATCTaGAGAAGTCTTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSAEKRGI*RSLCSG
Trigger: ACCTGAACAAAGACTTCTTCAGATACCACGCTTCTC...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGTGTCCCAGAACACTTTaGATTCATCAAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGCPRTL*IHQTPA
Trigger: AGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACA...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAAGGTGGCTGCTCAGCTaGAAGCCTGCAGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWARWLLS*KPAAFS
Trigger: ACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCT...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGCACTCCTGCCTCATTTaGTCAAAGCTCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQHSCLI*SKLWPE
Trigger: CTCAGGCCAGAGCTTTGAGCAAATGAGGCAGGAGTG...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGCACTCCTGCCTCATTTaGTCAAAGCTCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKHSCLI*SKLWPE
Trigger: CTCAGGCCAGAGCTTTGAGCAAATGAGGCAGGAGTG...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCAGAACAGGGAGGAATTaGTGGCTGGGAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGRTGRN*WLGSLH
Trigger: ATGCAGACTTCCCAGCCAGCAATTCCTCCCTGTTCT...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCCCGGGCCTCAGATTCTaGAGCACTTCTGGTATCAAT +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVPGLRF*STSGIN
Trigger: ATTGATACCAGAAGTGCTGCAGAATCTGAGGCCCGG...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTAAACTACACTCCTCCTaGCCCTCATCTTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPKLHSS*PSSFSV
Trigger: GACTGAGAAAGATGAGGGGCAGGAGGAGTGTAGTTT...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGTTCAGCTGGGCAGGCTaGATCTCTACAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGFSWAG*ISTRQP
Trigger: AGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAA...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGCCTGGAAGGCTGGCTTaGGTCCGGCAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLPGRLA*VRQWME
Trigger: TTCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGG...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCGGAGGAATTGCTGGCTaGGAAGTCTGCATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVGGIAG*EVCILK
Trigger: TTTGAGGATGCAGACTTCCCAGCCAGCAATTCCTCC...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCGGAGGAATTGCTGGCTaGGAAGTCTGCATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGGGIAG*EVCILK
Trigger: TTTGAGGATGCAGACTTCCCAGCCAGCAATTCCTCC...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAGGAGGAATTGCTGGCTaGGAAGTCTGCATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTGGIAG*EVCILK
Trigger: TTTGAGGATGCAGACTTCCCAGCCAGCAATTCCTCC...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGCCAAAGCTTTGGTCCTaGGGGATGACTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGPKLWS*GMTLAS
Trigger: ACTGGCCAGAGTCATCCCCCAGGACCAAAGCTTTGG...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTAGCTCCCATTTAGCTTaGCGTAGGCTTTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPSSHLA*RRLFPA
Trigger: TGCTGGAAAAAGCCTACGCCAAGCTAAATGGGAGCT...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGCTTCCATGGCCTCGATaGCGCTGCCTCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCALPWPR*RCLPSE
Trigger: CTCTGAAGGGAGGCAGCGCCATCGAGGCCATGGAAG...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCCCTCGGAAGCTTACCTaGTCAATTCCCGTTACACTG +
Preference number: 4 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCIPRKLT*SIPVTL
Trigger: CAGTGTAACGGGAATTGACCAGGTAAGCTTCCGAGG...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGATGAGCTCGATTCTCTaGCCTCGGAAGCTTACCTGG +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQMSSIL*PRKLTW
Trigger: CCAGGTAAGCTTCCGAGGCCAGAGAATCGAGCTCAT...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGATGAGCTCGATTCTCTaGCCTCGGAAGCTTACCTGG +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRMSSIL*PRKLTW
Trigger: CCAGGTAAGCTTCCGAGGCCAGAGAATCGAGCTCAT...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAAGGCAGCCCCCAGCCGTaGAGCCGCGAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQGSPQP*SREPSF
Trigger: GAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTGCC...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCCTGGCCCGAGAAGCGTaGTATCTGAAGAAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCILAREA*YLKKSL
Trigger: CAAAGACTTCTTCAGATACCACGCTTCTCGGGCCAG...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACACAGAAATCAGCTTCCTaGTGGGGCTCAAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTQKSAS*WGSKVL
Trigger: CAGCACTTTTGAGCCCCACCAGGAAGCTGATTTCTG...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCTCCTCCTCTGTCTCCTaGTCAGGTGGAGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVSSSVS*SGGVGF
Trigger: AAAGCCAACTCCACCTGACCAGGAGACAGAGGAGGA...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGTCCTCCTCTGTCTCCTaGTCAGGTGGAGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQSSSVS*SGGVGF
Trigger: AAAGCCAACTCCACCTGACCAGGAGACAGAGGAGGA...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCTTTGTACTGAGAGCCTaGAACACCCGGCTCGCATTC +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVFVLRA*NTRLAF
Trigger: GAATGCGAGCCGGGTGTTCCAGGCTCTCAGTACAAA...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCGGATGGAAAAGAAAGTaGAGAAGCGAGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVGWKRK*RSELCV
Trigger: CACACACAGCTCGCTTCTTCACTTTCTTTTCCATCC...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCACTGGCCAGTGCTTTTTaGTTAAGCGTAAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWALASAF*LSVREA
Trigger: CGCCTCCCTTACGCTTAATCAAAAAGCACTGGCCAG...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCACCAAGAGAAGTTCTaGAGGTCAAGGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVHQEKF*RSRSRS
Trigger: GCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTG...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGCACCAAGAGAAGTTCTaGAGGTCAAGGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKHQEKF*RSRSRS
Trigger: GCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTG...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAGAACAGGGAGGAATTaGTGGCTGGGAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQRTGRN*WLGSLH
Trigger: ATGCAGACTTCCCAGCCAGCAATTCCTCCCTGTTCT...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATGATGACTCTGGCCAGTaGTTTTTGATTAAGCGTAAG +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNDDSGQ*FLIKRK
Trigger: CTTACGCTTAATCAAAAAGCACTGGCCAGAGTCATC...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGTGGCCTCGATGGCGCTaGCTCCCTTCAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLWPRWR*LPSELH
Trigger: ATGAAGCTCTGAAGGGAGGCAGCGCCATCGAGGCCA...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAAGTTTGGAAGGTCTCTaGCACACCCCCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWASLEGL*HTPSEV
Trigger: GACTTCACTGGGGGTGTGGCAGAGACCTTCCAAACT...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGTTCCTTCTATCTTTCTaGATCAGGGCTACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGFLLSF*IRATRK
Trigger: TTTCCTTGTAGCCCTGATGCAGAAAGATAGAAGGAA...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGGGTGGGGCTCAAAAGTaGTGGGAATCAGGATGTACT +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQGGAQK*WESGCT
Trigger: AGTACATCCTGATTCCCAGCACTTTTGAGCCCCACC...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGGTGGGGCTCAAAAGTaGTGGGAATCAGGATGTACT +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKGGAQK*WESGCT
Trigger: AGTACATCCTGATTCCCAGCACTTTTGAGCCCCACC...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGATTTGCTCAAAGCTCTaGCCTGAGGAGTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQICSKL*PEEWVI
Trigger: GATCACCCACTCCTCAGGCCAGAGCTTTGAGCAAAT...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCATTTGCTCAAAGCTCTaGCCTGAGGAGTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVICSKL*PEEWVI
Trigger: GATCACCCACTCCTCAGGCCAGAGCTTTGAGCAAAT...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGATTTGCTCAAAGCTCTaGCCTGAGGAGTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKICSKL*PEEWVI
Trigger: GATCACCCACTCCTCAGGCCAGAGCTTTGAGCAAAT...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGACCAGGGCCAAAGCTTTaGTCCTGGGGGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRPGPKL*SWGMTL
Trigger: CAGAGTCATCCCCCAGGACCAAAGCTTTGGCCCTGG...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGTGCTGCCAGAACTaGAAATGGAATATCCCGGCA +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRLCCQN*KWNIPA
Trigger: TGCCGGGATATTCCATTTCCAGTTCTGGCAGCACAG...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAAGCTCCCATTTAGCTTaGCGTAGGCTTTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTSSHLA*RRLFPA
Trigger: TGCTGGAAAAAGCCTACGCCAAGCTAAATGGGAGCT...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCCTCGGAAGCTTACCTaGTCAATTCCCGTTACACTG +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRPRKLT*SIPVTL
Trigger: CAGTGTAACGGGAATTGACCAGGTAAGCTTCCGAGG...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCAGGGCACTCATAAATaGCATAGCCGATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLQGTHK*HSRLSA
Trigger: TGCTGACAATCGGCTATGCCATTTATGAGTGCCCTG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGGGCTCAAAAGTGCTaGGAATCAGGATGTACTCCC +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAGAQKC*ESGCTP
Trigger: GGGAGTACATCCTGATTCCCAGCACTTTTGAGCCCC...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGCAGAAATCAGCTTCCTaGTGGGGCTCAAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQQKSAS*WGSKVL
Trigger: CAGCACTTTTGAGCCCCACCAGGAAGCTGATTTCTG...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAGGTGGAGTTGGCTTTaGAGGCTCAGGAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQRWSWL*RLRKVN
Trigger: ATTGACCTTCCTGAGCCTCCAAAGCCAACTCCACCT...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACA +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKKPRFS*AGCIST
Trigger: TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTT...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACA +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQKPRFS*AGCIST
Trigger: TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTT...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAGGTTCCGGATTCGGATaGGCTCGATTCTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALEGSGFG*ARFSGL
Trigger: GAGGCCAGAGAATCGAGCTCATCCGAATCCGGAACC...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATTGTCCATCAGGGAAATaGTGTTTTTACAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNCPSGK*CFYRRS
Trigger: TGATCTCCTGTAAAAACATCATTTCCCTGATGGACA...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGAGGTGGCTGCTCAGCTaGAAGCCTGCAGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLRWLLS*KPAAFS
Trigger: ACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCT...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGCCTCATCCGCATACCTaGGCACAATCAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLPHPHT*AQSAAG
Trigger: TCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGG...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCACTTGAAGTCCTTAAATaGCATCCAGAATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSLEVLK*HPEFPI
Trigger: GATGGGGAATTCTGGATGGCATTTAAGGACTTCAAG...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271971.7
CDS-3UTR GCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTCAGCTGGGCAGGCTaGATCTCTACAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCAFSWAG*ISTRQP
Trigger: AGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAA...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGAGCTCCCATTTAGCTTaGCGTAGGCTTTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKSSHLA*RRLFPA
Trigger: TGCTGGAAAAAGCCTACGCCAAGCTAAATGGGAGCT...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCCCCTTAAGGTCCACTTTATCAAAGTaGGCCTTGAAGTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: VMPEPGCKAQVAPSAPLRSTLSK*ALKSLN
Trigger: ATTTAAGGACTTCAAGGCCCACTTTGATAAAGTGGA...CCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGGGCACTCATAAATaGCATAGCCGATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVQGTHK*HSRLSA
Trigger: TGCTGACAATCGGCTATGCCATTTATGAGTGCCCTG...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGCTGGCCCGAGAAGCGTaGTATCTGAAGAAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGLAREA*YLKKSL
Trigger: CAAAGACTTCTTCAGATACCACGCTTCTCGGGCCAG...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGAGGTGGAGTTGGCTTTaGAGGCTCAGGAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGRWSWL*RLRKVN
Trigger: ATTGACCTTCCTGAGCCTCCAAAGCCAACTCCACCT...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCATGGCCCCTCCAAGAATaGATTCTGGGTTTTTCACGA +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAWPLQE*ILGFSR
Trigger: TCGTGAAAAACCCAGAATTCATTCTTGGAGGGGCCA...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGCTGGCCAGTGCTTTTTaGTTAAGCGTAAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCALASAF*LSVREA
Trigger: CGCCTCCCTTACGCTTAATCAAAAAGCACTGGCCAG...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGGAGAAGCGTGGTATCTaGAGAAGTCTTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NPGRNGSTPREVLKVKVQEKRGI*RSLCSG
Trigger: ACCTGAACAAAGACTTCTTCAGATACCACGCTTCTC...CTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGATCAGAGAGTGTAGCTaGGTTCATTTCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLIRECS*VHFILP
Trigger: GGGAAGAATGAAATGAACTCAGCTACACTCTCTGAT...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGCTCTGCAGGCACTCCTaGCTCATTTGCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLLCRHS*LICSKL
Trigger: GAGCTTTGAGCAAATGAGGCAGGAGTGCCTGCAGAG...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp AGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCCTTGAAGTCCTTAAATaGCATCCAGAATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: REVLKVKVQKPRFSWAGCLEVLK*HPEFPI
Trigger: GATGGGGAATTCTGGATGGCATTTAAGGACTTCAAG...GCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS-3UTR GCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAAAACTACACTCCTCCTaGCCCTCATCTTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAKLHSS*PSSFSV
Trigger: GACTGAGAAAGATGAGGGGCAGGAGGAGTGTAGTTT...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCAAAAGGTTAATCCACTaGTTCAGCTTGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGKRLIH*FSLSQN
Trigger: GTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTT...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAAAGGTTAATCCACTaGTTCAGCTTGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLKRLIH*FSLSQN
Trigger: GTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTT...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAACTCTGGCCTGAGGAGTaGGTGATCCGGGCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQLWPEE*VIRASL
Trigger: CAAGGACGCCCGGATCACCCACTCCTCAGGCCAGAG...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGACAGGGAGGAATTGCTaGCTGGGAAGTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCATGRNC*LGSLHP
Trigger: AGGATGCAGACTTCCCAGCCAGCAATTCCTCCCTGT...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAGTCACCTCCCATTTGTaGATCGCGTCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALEVTSHL*IASSSR
Trigger: CCTGGAGGAAGACGCGATCCACAAATGGGAGGTGAC...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCACAGGGCACTCATAAATaGCATAGCCGATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAQGTHK*HSRLSA
Trigger: TGCTGACAATCGGCTATGCCATTTATGAGTGCCCTG...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGTCCTCCTCTGTCTCCTaGTCAGGTGGAGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLSSSVS*SGGVGF
Trigger: AAAGCCAACTCCACCTGACCAGGAGACAGAGGAGGA...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGTGTCCCAGAACACTTTaGATTCATCAAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRCPRTL*IHQTPA
Trigger: AGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACA...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGATCAGAGAGTGTAGCTaGGTTCATTTCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKIRECS*VHFILP
Trigger: GGGAAGAATGAAATGAACTCAGCTACACTCTCTGAT...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGCCCCCTTAAGGCAGTaGCTTTACAAAGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRAPLRQ*LYKGVA
Trigger: TGCTACTCCTTTGTAAAGTCACTGCCTTAAGGGGGC...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACATGTGCGTTAGAACTCTaGGTAATTCTTAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTCALEL*VILNGR
Trigger: CCTTCCATTAAGAATTACTCAGAGTTCTAACGCACA...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGTGTGCGTTAGAACTCTaGGTAATTCTTAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: DERGVNPGRNGSTPREVLCALEL*VILNGR
Trigger: CCTTCCATTAAGAATTACTCAGAGTTCTAACGCACA...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGCCGGGCCTCAGATTCTaGAGCACTTCTGGTATCAAT +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCAPGLRF*STSGIN
Trigger: ATTGATACCAGAAGTGCTGCAGAATCTGAGGCCCGG...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAACTTCCATGGCCTCGATaGCGCTGCCTCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQLPWPR*RCLPSE
Trigger: CTCTGAAGGGAGGCAGCGCCATCGAGGCCATGGAAG...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGCAGAAATCAGCTTCCTaGTGGGGCTCAAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCAQKSAS*WGSKVL
Trigger: CAGCACTTTTGAGCCCCACCAGGAAGCTGATTTCTG...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGATGGAAAAGAAAGTaGAGAAGCGAGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRGWKRK*RSELCV
Trigger: CACACACAGCTCGCTTCTTCACTTTCTTTTCCATCC...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGATGACTCTGGCCAGTaGTTTTTGATTAAGCGTAAG +
Preference number: 4 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGDDSGQ*FLIKRK
Trigger: CTTACGCTTAATCAAAAAGCACTGGCCAGAGTCATC...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCTTCCTTCTATCTTTCTaGATCAGGGCTACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVFLLSF*IRATRK
Trigger: TTTCCTTGTAGCCCTGATGCAGAAAGATAGAAGGAA...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGTTCCTTCTATCTTTCTaGATCAGGGCTACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRFLLSF*IRATRK
Trigger: TTTCCTTGTAGCCCTGATGCAGAAAGATAGAAGGAA...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR GCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGATACTCAAGTTCCTCTaGTGTCACCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCAILKFL*CHLHVL
Trigger: GAGGACATGGAGGTGACAGCAGAGGAACTTGAGTAT...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTTCACGATTTCCCCTaGTCGTTTCCACACAAAGGG +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCAFHDFP*SFPHKG
Trigger: CCCTTTGTGTGGAAACGACCAGGGGAAATCGTGAAA...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGTTTCACGATTTCCCCTaGTCGTTTCCACACAAAGGG +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLFHDFP*SFPHKG
Trigger: CCCTTTGTGTGGAAACGACCAGGGGAAATCGTGAAA...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGTCCAAGAATGAATTCTaGGTTTTTCACGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRSKNEF*VFHDFP
Trigger: GGGGAAATCGTGAAAAACCCAGAATTCATTCTTGGA...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTGGCCCGAGAAGCGTaGTATCTGAAGAAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALELAREA*YLKKSL
Trigger: CAAAGACTTCTTCAGATACCACGCTTCTCGGGCCAG...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGAGAAGCGTGGTATCTaGAGAAGTCTTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMREKRGI*RSLCSG
Trigger: ACCTGAACAAAGACTTCTTCAGATACCACGCTTCTC...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCATGTCCATCAGGGAAATaGTGTTTTTACAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TPREVLKVKVQKPRFSWACPSGK*CFYRRS
Trigger: TGATCTCCTGTAAAAACATCATTTCCCTGATGGACA...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAAACGCTTCTGCTCAGCTaGACCAACAGAACGCCACTC +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQTLLLS*TNRTPL
Trigger: GAGTGGCGTTCTGTTGGTCCAGCTGAGCAGAAGCGT...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271971.7
CDS-3UTR CCA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCTCCACTTTATCAAAGTaGGCCTTGAAGTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVSTLSK*ALKSLN
Trigger: ATTTAAGGACTTCAAGGCCCACTTTGATAAAGTGGA...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR TCA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTGTCCCAGAACACTTTaGATTCATCAAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGCLITMTGATWKSGFCACPRTL*IHQTPA
Trigger: AGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACA...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAAAAAGGTTAATCCACTaGTTCAGCTTGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALEKRLIH*FSLSQN
Trigger: GTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTT...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGGAAGTCAGGATTCTGTaGGTTAGAACTCTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLEVRIL*VRTLSN
Trigger: ATTACTCAGAGTTCTAACGCACAGAATCCTGACTTC...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR TCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAATGTCCATCAGGGAAATaGTGTTTTTACAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALECPSGK*CFYRRS
Trigger: TGATCTCCTGTAAAAACATCATTTCCCTGATGGACA...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAAATACTCAAGTTCCTCTaGTGTCACCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQILKFL*CHLHVL
Trigger: GAGGACATGGAGGTGACAGCAGAGGAACTTGAGTAT...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR GCA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAGAAGTCAGGATTCTGTaGGTTAGAACTCTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: CLITMTGATWKSGFCALEEVRIL*VRTLSN
Trigger: ATTACTCAGAGTTCTAACGCACAGAATCCTGACTTC...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAATCCAAGAATGAATTCTaGGTTTTTCACGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQSKNEF*VFHDFP
Trigger: GGGGAAATCGTGAAAAACCCAGAATTCATTCTTGGA...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CCA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAATCCACTTTATCAAAGTaGGCCTTGAAGTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: SSTKSESVAEFISFFPDQSTLSK*ALKSLN
Trigger: ATTTAAGGACTTCAAGGCCCACTTTGATAAAGTGGA...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS CCA 90 bp GTGGGTGATCCGGGCGTCCTTGGGAACCGGGTGTGCCTGAGGCCCTaGGGCCCGGTAGAGGTAAGGCATGGCTGCTCCCTGGAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VGDPGVLGNRVCLRP*GPVEVRHGCSLEGW
Trigger: CCAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACCGGGCCCCAGGGCCTCAGGCACACCCGGTTCCCAAGGACGCCCGGATCACCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp GAACCGGGTGTGCCTGAGGCCCTGGGGCCCGGTAGAGGTAAGGCATaGCTGCTCCCTGGAAGGCTGGCTTGGGTCCGGCAGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: EPGVPEALGPGRGKA*LLPGRLAWVRQWME
Trigger: TTCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACCGGGCCCCAGGGCCTCAGGCACACCCGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 90 bp GGCACTCCTGCCTCATTTGCTCAAAGCTCTGGCCTGAGGAGTGGGTaGTCCGGGCGTCCTTGGGAACCGGGTGTGCCTGAGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTPASFAQSSGLRSG*SGRPWEPGVPEALG
Trigger: CCCCAGGGCCTCAGGCACACCCGGTTCCCAAGGACGCCCGGATCACCCACTCCTCAGGCCAGAGCTTTGAGCAAATGAGGCAGGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS GCA 90 bp CGGGTGTGCCTGAGGCCCTGGGGCCCGGTAGAGGTAAGGCATGGCTaGTCCCTGGAAGGCTGGCTTGGGTCCGGCAGTGGATGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: RVCLRPWGPVEVRHG*SLEGWLGSGSGWKR
Trigger: TCTTTTCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACCGGGCCCCAGGGCCTCAGGCACACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 90 bp AAATTGCGGCAGCCCCCAGCCGTGGAGCCGCGAACCCAGCTTCCCTaGTGGACCGTCACCTCCCATTTGTGGATCGCGTCTTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KLRQPPAVEPRTQLP*WTVTSHLWIASSSR
Trigger: CCTGGAGGAAGACGCGATCCACAAATGGGAGGTGACGGTCCATCAGGGAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTGCCGCAATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 90 bp GAGCCTGGAACACCCGGCTCGCATTCTCCAGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCAGCTGGAGCTCCTCATCCGCATACC +
Preference number: 5 (lower is better)
Translates to: EPGTPGSHSPAGPGS*GSHRSPAGAPHPHT
Trigger: GGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGTTCCAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGTCCCCAGGGGGCAGCTaGAACCGGTCGGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGSPGGS*NRSETS
Trigger: AGAAGTCTCCGACCGGTTCAAGCTGCCCCCTGGGGA...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp GGGCCCGGTAGAGGTAAGGCATGGCTGCTCCCTGGAAGGCTGGCTTaGGTCCGGCAGTGGATGGAAAAGAAAGTGAAGAAGCGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GPGRGKAWLLPGRLA*VRQWMEKKVKKRAV
Trigger: CACAGCTCGCTTCTTCACTTTCTTTTCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACCGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp GATTGGTCCAAAAGGTATCCAGGAAATTGCGGCAGCCCCCAGCCGTaGAGCCGCGAACCCAGCTTCCCTGATGGACCGTCACCTCCCATT +
Preference number: 5 (lower is better)
Translates to: DWSKRYPGNCGSPQP*SREPSFPDGPSPPI
Trigger: AATGGGAGGTGACGGTCCATCAGGGAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTGCCGCAATTTCCTGGATACCTTTTGGACCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp TTCCCCATCATCCAGAGCAGTGTGACACAGACGCTTCTGCTCAGCTaGACCAACAGAACGCCACTCCGGAGAACTGTCGCTCCACGACCC +
Preference number: 5 (lower is better)
Translates to: FPIIQSSVTQTLLLS*TNRTPLRRTVAPRP
Trigger: GGGTCGTGGAGCGACAGTTCTCCGGAGTGGCGTTCTGTTGGTCCAGCTGAGCAGAAGCGTCTGTGTCACACTGCTCTGGATGATGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS-3UTR CAA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCCCTGGAAGGCTGGCTaGGGTCCGGCAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: DERGVNPGRNGSTPREVLPWKAG*GPAVDG
Trigger: TCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGGG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCCCCTTAAGGACCGTCACCTCCCATTaGTGGATCGCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VMPEPGCKAQVAPSAPLRTVTSH*WIASSS
Trigger: GGAGGAAGACGCGATCCACAAATGGGAGGTGACGGT...CCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS GCA 90 bp TCCATGTCCTCACCAGCGACTTGTTCAAACAGAGCCCGAAACCGCTaGTCCTCCTCTGTCTCCTGGTCAGGTGGAGTTGGCTTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SMSSPATCSNRARNR*SSSVSWSGGVGFGG
Trigger: GCCTCCAAAGCCAACTCCACCTGACCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp TTCTCCAGCCGGACCAGGCAGTTGAGGAAGTCATCGAAGTCCAGCTaGAGCTCCTCATCCGCATACCTGAGCACAATCAGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FSSRTRQLRKSSKSS*SSSSAYLSTISCRR
Trigger: CCTCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS-3UTR CAA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGCCCTGGAAGGCTGGCTaGGGTCCGGCAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKPWKAG*GPAVDG
Trigger: TCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGGG...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAGCCAACTCCAGCTTCCCATaGCCGCTGGTGTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: GKLVMPEPGCKAQVAPSANSSFP*PLVSIR
Trigger: CCTGATGGACACCAGCGGCAATGGGAAGCTGGAGTT...GGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATAGCCGGACCAGGCAGTaGAGGAAGTCATCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNSRTRQ*RKSSKS
Trigger: GGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCT...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAACCAGGGCCAAAGCTTaGGTCCTGGGGGATGACTCT +
Preference number: 5 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSTRAKA*VLGDDS
Trigger: AGAGTCATCCCCCAGGACCAAAGCTTTGGCCCTGGT...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTATCCAGGAAATaGCGGCAGCCCCCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVKVSRK*RQPPAV
Trigger: CACGGCTGGGGGCTGCCGCAATTTCCTGGATACCTT...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGTCCCCAGGGGGCAGCTaGAACCGGTCGGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKSPGGS*NRSETS
Trigger: AGAAGTCTCCGACCGGTTCAAGCTGCCCCCTGGGGA...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCTCCCCAGGGGGCAGCTaGAACCGGTCGGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVSPGGS*NRSETS
Trigger: AGAAGTCTCCGACCGGTTCAAGCTGCCCCCTGGGGA...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTAACTCCAGCTTCCCATaGCCGCTGGTGTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPNSSFP*PLVSIR
Trigger: CCTGATGGACACCAGCGGCAATGGGAAGCTGGAGTT...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 90 bp TGTCAAATGGATGAAGGCTCGCATTCTCCAGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCAGCTGGAGCTCCTCATCCGCATACC +
Preference number: 5 (lower is better)
Translates to: CQMDEGSHSPAGPGS*GSHRSPAGAPHPHT
Trigger: GGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCTTCATCCATTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480004.1
CDS-3UTR CAA 90 bp CTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTACAGGGGGCCTCTTTAGTTaGGAAGGTCTCTGCCACACC +
Preference number: 5 (lower is better)
Translates to: LKVKVQKPRFSWAGCISTGGLFS*EGLCHT
Trigger: GGTGTGGCAGAGACCTTCCAAACTAAAGAGGCCCCC...TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCGGGGGCCTCTTTAGTTaGGAAGGTCTCTGCCACACC +
Preference number: 5 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGGGLFS*EGLCHT
Trigger: GGTGTGGCAGAGACCTTCCAAACTAAAGAGGCCCCC...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAGCCGGACCAGGCAGTaGAGGAAGTCATCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: DERGVNPGRNGSTPREVLSRTRQ*RKSSKS
Trigger: GGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCT...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGACCCTGGAAGGCTGGCTaGGGTCCGGCAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRPWKAG*GPAVDG
Trigger: TCCATCCACTGCCGGACCCAAGCCAGCCTTCCAGGG...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCACCGTCACCTCCCATTaGTGGATCGCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVTVTSH*WIASSS
Trigger: GGAGGAAGACGCGATCCACAAATGGGAGGTGACGGT...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGACCGTCACCTCCCATTaGTGGATCGCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRTVTSH*WIASSS
Trigger: GGAGGAAGACGCGATCCACAAATGGGAGGTGACGGT...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCAGGTTGATGAACGTCTaGCTTCTGGCCCGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCIRLMNV*LLAREA
Trigger: CGCTTCTCGGGCCAGAAGCAAGACGTTCATCAACCT...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCGACATGGTGCCGGACTaGTCAGCATCAAACCGAAGG +
Preference number: 5 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVDMVPD*SASNRR
Trigger: CCTTCGGTTTGATGCTGACAAGTCCGGCACCATGTC...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp CAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCGTAATAAATGGCATAGCCGATaGTCAGCACATTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: QDEGRRPDDERGVNPGRNKWHSR*SAHWHQ
Trigger: TTGGTGCCAATGTGCTGACAATCGGCTATGCCATTT...ATTACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCGTCCTCACCAGCGACTaGTTCAAACAGAGCCCGAAA +
Preference number: 5 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCIVLTSD*FKQSPK
Trigger: TTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGAC...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCGTCCTCACCAGCGACTaGTTCAAACAGAGCCCGAAA +
Preference number: 5 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVVLTSD*FKQSPK
Trigger: TTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGAC...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGAACTCCAGCTTCCCATaGCCGCTGGTGTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGNSSFP*PLVSIR
Trigger: CCTGATGGACACCAGCGGCAATGGGAAGCTGGAGTT...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGGACATGGTGCCGGACTaGTCAGCATCAAACCGAAGG +
Preference number: 5 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRDMVPD*SASNRR
Trigger: CCTTCGGTTTGATGCTGACAAGTCCGGCACCATGTC...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTCTGGCCAGTGCTTTTaGATTAAGCGTAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCISGQCF*IKRKGG
Trigger: GCCTCCCTTACGCTTAATCAAAAAGCACTGGCCAGA...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp AGTTCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAAAGGTATCCAGGAAATaGCGGCAGCCCCCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SSFHSSQIKMKGEGRTMRKVSRK*RQPPAV
Trigger: CACGGCTGGGGGCTGCCGCAATTTCCTGGATACCTT...TCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAAAATGGCATAGCCGATaGTCAGCACATTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSKWHSR*SAHWHQ
Trigger: TTGGTGCCAATGTGCTGACAATCGGCTATGCCATTT...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAAGGTTGATGAACGTCTaGCTTCTGGCCCGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: TPREVLKVKVQKPRFSWARLMNV*LLAREA
Trigger: CGCTTCTCGGGCCAGAAGCAAGACGTTCATCAACCT...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGAGGTTGATGAACGTCTaGCTTCTGGCCCGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGRLMNV*LLAREA
Trigger: CGCTTCTCGGGCCAGAAGCAAGACGTTCATCAACCT...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCGTCCTCACCAGCGACTaGTTCAAACAGAGCCCGAAA +
Preference number: 5 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVVLTSD*FKQSPK
Trigger: TTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGAC...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACAAGGCAGCCTCAGATGTTCATTGTC +
Preference number: 5 (lower is better)
Translates to: PREVLKVKVQKPRFS*AGCISTRQPQMFIV
Trigger: GACAATGAACATCTGAGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS-3UTR CAA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGGGGGGCCTCTTTAGTTaGGAAGGTCTCTGCCACACC +
Preference number: 5 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLGGLFS*EGLCHT
Trigger: GGTGTGGCAGAGACCTTCCAAACTAAAGAGGCCCCC...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCAAATGGCATAGCCGATaGTCAGCACATTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGKWHSR*SAHWHQ
Trigger: TTGGTGCCAATGTGCTGACAATCGGCTATGCCATTT...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS GCA 90 bp GTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTaGATCTCTACAAGGCAGCCTCAGATGTTCATTGTCAAATGGATG +
Preference number: 5 (lower is better)
Translates to: VLKVKVQKPRFSWAG*ISTRQPQMFIVKWM
Trigger: CATCCATTTGACAATGAACATCTGAGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS-3UTR CAA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCATCTGGCCAGTGCTTTTaGATTAAGCGTAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TPREVLKVKVQKPRFSWASGQCF*IKRKGG
Trigger: GCCTCCCTTACGCTTAATCAAAAAGCACTGGCCAGA...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAACCAGGGCCAAAGCTTaGGTCCTGGGGGATGACTCT +
Preference number: 5 (lower is better)
Translates to: CLITMTGATWKSGFCALETRAKA*VLGDDS
Trigger: AGAGTCATCCCCCAGGACCAAAGCTTTGGCCCTGGT...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp CCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTGGGCAGAGACAATTTTATTaGTGGATTGGTCCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: PDQDEGRRPDDERGVNPGQRQFY*WIGPKG
Trigger: ACCTTTTGGACCAATCCACAAATAAAATTGTCTCTG...CCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 90 bp ACTTCTCTCAGGTTGATGAACGTCTTGCTTCTGGCCCGAGAAGCGTaGTATCTGAAGAAGTCTTTGTTCAGGTGTTCGTCTTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: TSLRLMNVLLLAREA*YLKKSLFRCSSLSG
Trigger: CCCTGACAAAGACGAACACCTGAACAAAGACTTCTTCAGATACCACGCTTCTCGGGCCAGAAGCAAGACGTTCATCAACCTGAGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCATATCTGAAGAAGTCTTaGTTCAGGTGTTCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSYLKKS*FRCSSL
Trigger: CAAAGACGAACACCTGAACAAAGACTTCTTCAGATA...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp TCATTTCATTCTTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGACTTCTCTCAGGTaGATGAACGTCTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SFHSSQIKMKGEGRTMRGETSLR*MNVLLL
Trigger: CAGAAGCAAGACGTTCATCAACCTGAGAGAAGTCTC...CCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCTTGTCCCAGAACACTTaGAATTCATCAAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCILSQNT*NSSNSS
Trigger: GCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAA...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGTTGTCCCAGAACACTTaGAATTCATCAAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: DERGVNPGRNGSTPREVLLSQNT*NSSNSS
Trigger: GCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAA...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCATCCACTGCTTCAGCTaGTCCCAGAACACTTTGAAT +
Preference number: 5 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVIHCFS*SQNTLN
Trigger: ATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGAT...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS GCA 90 bp GTCAGCACATTGGCACCAAATCTCTTGAGTTTCCTTCTATCTTTCTaGATCAGGGCTACAAGGAAACTACACTCCTCCTGCCCCTCATCT +
Preference number: 5 (lower is better)
Translates to: VSTLAPNLLSFLLSF*IRATRKLHSSCPSS
Trigger: AGATGAGGGGCAGGAGGAGTGTAGTTTCCTTGTAGCCCTGATGCAGAAAGATAGAAGGAAACTCAAGAGATTTGGTGCCAATGTGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp ACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGTTATCAAAGTGGGCCTaGAAGTCCTTAAATGCCATC +
Preference number: 5 (lower is better)
Translates to: TKRSSEGQGPEAKIQLGRLSKWA*KSLNAI
Trigger: GATGGCATTTAAGGACTTCAAGGCCCACTTTGATAA...CCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp TTCCCAGATCAAGATGAAGGGAGAAGGCCGGACGATGAGAGGGGAGTGAACCCTAATTTTATTTGTGGATaGGTCCAAAAGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: FPDQDEGRRPDDERGVNPNFICG*VQKVSR
Trigger: CCTGGATACCTTTTGGACCAATCCACAAATAAAATT...AGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp CCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTATCTGAAGAAGTCTTaGTTCAGGTGTTCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PREVLKVKVQKPRFSWAGYLKKS*FRCSSL
Trigger: CAAAGACGAACACCTGAACAAAGACTTCTTCAGATA...GCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGGGAAAGCTAGTGATGCCTGAACCTGGATGTAAGGCACAGGTGGCGCCATCAATCAGGCTTAGCTTCTaGAATTTGATGTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: VGKLVMPEPGCKAQVAPSIRLSF*NLMSFF
Trigger: GAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGAT...TGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAATCCACTGCTTCAGCTaGTCCCAGAACACTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TPREVLKVKVQKPRFSWAIHCFS*SQNTLN
Trigger: ATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGAT...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp ACACCAAGAGAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCATTATCAAAGTGGGCCTaGAAGTCCTTAAATGCCATC +
Preference number: 5 (lower is better)
Translates to: TPREVLKVKVQKPRFSWALSKWA*KSLNAI
Trigger: GATGGCATTTAAGGACTTCAAGGCCCACTTTGATAA...TGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GAAGTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTGGGCAGGCTGCATCAATTTTATTTGTGGATaGGTCCAAAAGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: EVLKVKVQKPRFSWAGCINFICG*VQKVSR
Trigger: CCTGGATACCTTTTGGACCAATCCACAAATAAAATT...GATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GATGAGAGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGCAGAGACAATTTTATTaGTGGATTGGTCCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: DERGVNPGRNGSTPREVLQRQFY*WIGPKG
Trigger: ACCTTTTGGACCAATCCACAAATAAAATTGTCTCTG...CAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCTCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCCAGAGACAATTTTATTaGTGGATTGGTCCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVQRQFY*WIGPKG
Trigger: ACCTTTTGGACCAATCCACAAATAAAATTGTCTCTG...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAACTCTGGAGACTTCTCTCAGGTaGATGAACGTCTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: DHNDWSYMEVRILCVRTLETSLR*MNVLLL
Trigger: CAGAAGCAAGACGTTCATCAACCTGAGAGAAGTCTC...CAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGGAGACTTCTCTCAGGTaGATGAACGTCTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KGCLITMTGATWKSGFCAETSLR*MNVLLL
Trigger: CAGAAGCAAGACGTTCATCAACCTGAGAGAAGTCTC...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp AGGGGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCATCAGGCTTAGCTTCTaGAATTTGATGTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RGVNPGRNGSTPREVLKVIRLSF*NLMSFF
Trigger: GAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGAT...GACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGGTCAATTTTATTTGTGGATaGGTCCAAAAGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: VNPGRNGSTPREVLKVKVNFICG*VQKVSR
Trigger: CCTGGATACCTTTTGGACCAATCCACAAATAAAATT...GACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp GGAGTGAACCCTGGGCGTAATGGTTCCACACCAAGAGAAGTTCTGAAGGTCAAGATCAGGCTTAGCTTCTaGAATTTGATGTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GVNPGRNGSTPREVLKVKIRLSF*NLMSFF
Trigger: GAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGAT...CTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAAGACATGGTGCCGGACTaGTCAGCATCAAACCGAAGG +
Preference number: 5 (lower is better)
Translates to: SSTKSESVAEFISFFPDQDMVPD*SASNRR
Trigger: CCTTCGGTTTGATGCTGACAAGTCCGGCACCATGTC...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTATCAAAGTGGGCCTaGAAGTCCTTAAATGCCATC +
Preference number: 5 (lower is better)
Translates to: KGCLITMTGATWKSGFCALSKWA*KSLNAI
Trigger: GATGGCATTTAAGGACTTCAAGGCCCACTTTGATAA...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp AAAGGATGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTGTCCCAGAACACTTaGAATTCATCAAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: KGCLITMTGATWKSGFCALSQNT*NSSNSS
Trigger: GCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAA...CGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS-3UTR CAA 90 bp TGTCTGATCACAATGACTGGAGCTACATGGAAGTCAGGATTCTGTGCGTTAGAAATCCACTGCTTCAGCTaGTCCCAGAACACTTTGAAT +
Preference number: 5 (lower is better)
Translates to: CLITMTGATWKSGFCALEIHCFS*SQNTLN
Trigger: ATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGAT...TTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS GCA 90 bp CTTCTATCTTTCTGCATCAGGGCTACAAGGAAACTACACTCCTCCTaGCCCTCATCTTTCTCAGTCAGAGACAATTTTATTTGTGGATTG +
Preference number: 5 (lower is better)
Translates to: LLSFCIRATRKLHSS*PSSFSVRDNFICGL
Trigger: CAATCCACAAATAAAATTGTCTCTGACTGAGAAAGATGAGGGGCAGGAGGAGTGTAGTTTCCTTGTAGCCCTGATGCAGAAAGATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS-3UTR CAA 90 bp AGTAGCACAAAATCAGAGAGTGTAGCTGAGTTCATTTCATTCTTCCCAGATCAATATCTGAAGAAGTCTTaGTTCAGGTGTTCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SSTKSESVAEFISFFPDQYLKKS*FRCSSL
Trigger: CAAAGACGAACACCTGAACAAAGACTTCTTCAGATA...TTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS GCA 72 bp CTGAGGCCCTGGGGCCCGGTAGAGGTAAGGCATGGCTaGTCCCTGGAAGGCTGGCTTGGGTCCGGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LRPWGPVEVRHG*SLEGWLGSGSG
Trigger: TCCACTGCCGGACCCAAGCCAGCCTTCCAGGGAGCAGCCATGCCTTACCTCTACCGGGCCCCAGGGCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS GCA 72 bp GGAGTGGGTGATCCGGGCGTCCTTGGGAACCGGGTGTaGCTGAGGCCCTGGGGCCCGGTAGAGGTAAGGCAT +
Preference number: 6 (lower is better)
Translates to: GVGDPGVLGNRV*LRPWGPVEVRH
Trigger: ATGCCTTACCTCTACCGGGCCCCAGGGCCTCAGGCACACCCGGTTCCCAAGGACGCCCGGATCACCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 72 bp CAGCCCCCAGCCGTGGAGCCGCGAACCCAGCTTCCCTaGTGGACCGTCACCTCCCATTTGTGGATCGCGTCT +
Preference number: 6 (lower is better)
Translates to: QPPAVEPRTQLP*WTVTSHLWIAS
Trigger: AGACGCGATCCACAAATGGGAGGTGACGGTCCATCAGGGAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 72 bp GCCTCATTTGCTCAAAGCTCTGGCCTGAGGAGTGGGTaGTCCGGGCGTCCTTGGGAACCGGGTGTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: ASFAQSSGLRSG*SGRPWEPGVPE
Trigger: CTCAGGCACACCCGGTTCCCAAGGACGCCCGGATCACCCACTCCTCAGGCCAGAGCTTTGAGCAAATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CCA 72 bp AAAAGGTATCCAGGAAATTGCGGCAGCCCCCAGCCGTaGAGCCGCGAACCCAGCTTCCCTGATGGACCGTCA +
Preference number: 6 (lower is better)
Translates to: KRYPGNCGSPQP*SREPSFPDGPS
Trigger: TGACGGTCCATCAGGGAAGCTGGGTTCGCGGCTCCACGGCTGGGGGCTGCCGCAATTTCCTGGATACCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CAA 90 bp AGAGCCTGGAACACCCGGCTCGCATTCTCCAGCCGGACCAGGCAGTaGAGGAAGTCATCGAAGTCCAGCTGGAGCTCCTCATCCGCATAC +
Preference number: 6 (lower is better)
Translates to: RAWNTRLAFSSRTRQ*RKSSKSSWSSSSAY
Trigger: GTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGTTCCAGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 72 bp ACACCCGGCTCGCATTCTCCAGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCAGCTGGAGCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: TPGSHSPAGPGS*GSHRSPAGAPH
Trigger: ATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CAA 72 bp AACACCCGGCTCGCATTCTCCAGCCGGACCAGGCAGTaGAGGAAGTCATCGAAGTCCAGCTGGAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: NTRLAFSSRTRQ*RKSSKSSWSSS
Trigger: TGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 72 bp CATCGAAGTCCAGCTGGAGCTCCTCATCCGCATACCTaGGCACAATCAGCTGCAGGAGGTGGCTGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: HRSPAGAPHPHT*AQSAAGGGCSA
Trigger: AGCTGAGCAGCCACCTCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS GCA 72 bp TCACCAGCGACTTGTTCAAACAGAGCCCGAAACCGCTaGTCCTCCTCTGTCTCCTGGTCAGGTGGAGTTGGC +
Preference number: 6 (lower is better)
Translates to: SPATCSNRARNR*SSSVSWSGGVG
Trigger: GCCAACTCCACCTGACCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 72 bp GATGAAGGCTCGCATTCTCCAGCCGGACCAGGCAGTTaGGGAAGTCATCGAAGTCCAGCTGGAGCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: DEGSHSPAGPGS*GSHRSPAGAPH
Trigger: ATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480004.1
CDS GCA 72 bp GGATCTGCGGCCTCTCACTGTAGAACAGGGAGGAATTaGTGGCTGGGAAGTCTGCATCCTCAAACAGGGTGC +
Preference number: 6 (lower is better)
Translates to: GSAASHCRTGRN*WLGSLHPQTGC
Trigger: GCACCCTGTTTGAGGATGCAGACTTCCCAGCCAGCAATTCCTCCCTGTTCTACAGTGAGAGGCCGCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS GCA 72 bp GCCAAAGCTTTGGTCCTGGGGGATGACTCTGGCCAGTaGTTTTTGATTAAGCGTAAGGGAGGCGATGGCGGC +
Preference number: 6 (lower is better)
Translates to: AKALVLGDDSGQ*FLIKRKGGDGG
Trigger: GCCGCCATCGCCTCCCTTACGCTTAATCAAAAAGCACTGGCCAGAGTCATCCCCCAGGACCAAAGCTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS CCA 72 bp ATCCAGAGCAGTGTGACACAGACGCTTCTGCTCAGCTaGACCAACAGAACGCCACTCCGGAGAACTGTCGCT +
Preference number: 6 (lower is better)
Translates to: IQSSVTQTLLLS*TNRTPLRRTVA
Trigger: AGCGACAGTTCTCCGGAGTGGCGTTCTGTTGGTCCAGCTGAGCAGAAGCGTCTGTGTCACACTGCTCTGGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS CCA 72 bp CGGACCAGGCAGTTGAGGAAGTCATCGAAGTCCAGCTaGAGCTCCTCATCCGCATACCTGAGCACAATCAGC +
Preference number: 6 (lower is better)
Translates to: RTRQLRKSSKSS*SSSSAYLSTIS
Trigger: GCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS CCA 72 bp CCCCAAGGGTTCCGGATTCGGATGAGCTCGATTCTCTaGCCTCGGAAGCTTACCTGGTCAATTCCCGTTACA +
Preference number: 6 (lower is better)
Translates to: PQGFRIRMSSIL*PRKLTWSIPVT
Trigger: TGTAACGGGAATTGACCAGGTAAGCTTCCGAGGCCAGAGAATCGAGCTCATCCGAATCCGGAACCCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS TCA 72 bp CTTTGGTCCTGGGGGATGACTCTGGCCAGTGCTTTTTaGTTAAGCGTAAGGGAGGCGATGGCGGCTAATAGC +
Preference number: 6 (lower is better)
Translates to: LWSWGMTLASAF*LSVREAMAANS
Trigger: GCTATTAGCCGCCATCGCCTCCCTTACGCTTAATCAAAAAGCACTGGCCAGAGTCATCCCCCAGGACCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS GCA 72 bp GTGGATGGAAAAGAAAGTGAAGAAGCGAGCTGTGTGTaGCGGTCAAGAAGGAACAGCTCAGAGGGCCACTGG +
Preference number: 6 (lower is better)
Translates to: VDGKESEEASCV*RSRRNSSEGHW
Trigger: CCAGTGGCCCTCTGAGCTGTTCCTTCTTGACCGGCACACACAGCTCGCTTCTTCACTTTCTTTTCCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000366666.6
CDS CCA 72 bp GTTCTGAAGGTCAAGGTCCAGAAGCCAAGATTCAGCTaGGCAGGCTGCATCTCTACAAGGCAGCCTCAGATG +
Preference number: 6 (lower is better)
Translates to: VLKVKVQKPRFS*AGCISTRQPQM
Trigger: CATCTGAGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS CAA 72 bp GAAATGGAATATCCCGGCATAACCAGGGCCAAAGCTTaGGTCCTGGGGGATGACTCTGGCCAGTGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: EMEYPGITRAKA*VLGDDSGQCFL
Trigger: CAAAAAGCACTGGCCAGAGTCATCCCCCAGGACCAAAGCTTTGGCCCTGGTTATGCCGGGATATTCCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS CAA 72 bp AACCGGTCGGAGACTTCTCTCAGGTTGATGAACGTCTaGCTTCTGGCCCGAGAAGCGTGGTATCTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: NRSETSLRLMNV*LLAREAWYLKK
Trigger: CTTCTTCAGATACCACGCTTCTCGGGCCAGAAGCAAGACGTTCATCAACCTGAGAGAAGTCTCCGACCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CAA 90 bp GGCAGCTTGAACCGGTCGGAGACTTCTCTCAGGTTGATGAACGTCTaGCTTCTGGCCCGAGAAGCGTGGTATCTGAAGAAGTCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: GSLNRSETSLRLMNV*LLAREAWYLKKSLF
Trigger: GAACAAAGACTTCTTCAGATACCACGCTTCTCGGGCCAGAAGCAAGACGTTCATCAACCTGAGAGAAGTCTCCGACCGGTTCAAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CAA 90 bp CCAGAACTGGAAATGGAATATCCCGGCATAACCAGGGCCAAAGCTTaGGTCCTGGGGGATGACTCTGGCCAGTGCTTTTTGATTAAGCGT +
Preference number: 6 (lower is better)
Translates to: PELEMEYPGITRAKA*VLGDDSGQCFLIKR
Trigger: ACGCTTAATCAAAAAGCACTGGCCAGAGTCATCCCCCAGGACCAAAGCTTTGGCCCTGGTTATGCCGGGATATTCCATTTCCAGTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271971.7
ENST00000354537.1
CDS CAA 90 bp CGAAGGAAAAGGTTAATCCACTGCTTCAGCTTGTCCCAGAACACTTaGAATTCATCAAACTCCAGCTTCCCATTGCCGCTGGTGTCCATC +
Preference number: 6 (lower is better)
Translates to: RRKRLIHCFSLSQNT*NSSNSSFPLPLVSI
Trigger: GATGGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS CAA 72 bp AGGTTAATCCACTGCTTCAGCTTGTCCCAGAACACTTaGAATTCATCAAACTCCAGCTTCCCATTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: RLIHCFSLSQNT*NSSNSSFPLPL
Trigger: CAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1
CDS GCA 72 bp TTCTGCATCAGGGCTACAAGGAAACTACACTCCTCCTaGCCCTCATCTTTCTCAGTCAGAGACAATTTTATT +
Preference number: 6 (lower is better)
Translates to: FCIRATRKLHSS*PSSFSVRDNFI
Trigger: AATAAAATTGTCTCTGACTGAGAAAGATGAGGGGCAGGAGGAGTGTAGTTTCCTTGTAGCCCTGATGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CAA 72 bp TCATCTTTCTCAGTCAGAGACAATTTTATTTGTGGATaGGTCCAAAAGGTATCCAGGAAATTGCGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: SSFSVRDNFICG*VQKVSRKLRQP
Trigger: GGGCTGCCGCAATTTCCTGGATACCTTTTGGACCAATCCACAAATAAAATTGTCTCTGACTGAGAAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
CDS CAA 72 bp TCAAACCGAAGGAAAAGGTTAATCCACTGCTTCAGCTaGTCCCAGAACACTTTGAATTCATCAAACTCCAGC +
Preference number: 6 (lower is better)
Translates to: SNRRKRLIHCFS*SQNTLNSSNSS
Trigger: GCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271971.7
ENST00000354537.1
ENST00000366666.6
ENST00000480004.1