RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN7 (Homo sapiens)

Ensembl gene IDs: ENSG00000131375

Ensembl transcript IDs: ENST00000253693.7, ENST00000415565.1, ENST00000418994.1, ENST00000443567.5, ENST00000457023.1, ENST00000463417.5, ENST00000472400.1

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAAAATGTGCTCTCACTGGAGGTGGCTTTGGCTTAACACTTGTTaGACTGATTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGC +
Preference number: 1 (lower is better)
Translates to: WKMCSHWRWLWLNTC*TDFANWLGQRLTQR
Trigger: GCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCCAAAGCCACCTCCAGTGAGAGCACATTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR GCA 90 bp AGGTCTCTTCTAATAAATTTGATGGCAGGGATTAGGTTTTTAGTTTaGATCCTGTACAAGATCTTTACCACAACAGGTTCAAATCATGTG +
Preference number: 1 (lower is better)
Translates to: RSLLINLMAGIRFLV*ILYKIFTTTGSNHV
Trigger: CACATGATTTGAACCTGTTGTGGTAAAGATCTTGTACAGGATGCAAACTAAAAACCTAATCCCTGCCATCAAATTTATTAGAAGAGACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR CAA 90 bp GCTCTCACTGGAGGTGGCTTTGGCTTAACACTTGTTGAACTGATTTaGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: ALTGGGFGLTLVELI*PTGLVKGSLSASAL
Trigger: CAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCCAAAGCCACCTCCAGTGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR CAA 90 bp GGTGGCTTTGGCTTAACACTTGTTGAACTGATTTTGCCAACTGGCTaGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTGCCTGT +
Preference number: 2 (lower is better)
Translates to: GGFGLTLVELILPTG*VKGSLSASALSSAC
Trigger: ACAGGCACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCCAAAGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR-3UTR GCA 90 bp CTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACATGACTGAGGACGCCCAGTGGAAAATGTaGTCTCACTGGAGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: LLFLLLCISVLVHHMTEDAQWKM*SHWRWL
Trigger: AAGCCACCTCCAGTGAGAGCACATTTTCCACTGGGC...GTCCTCAGTCATGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR-3UTR CCA 90 bp CTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACATGACTGAGGACTTTTGCCAACTGGCTTaGTCAAAGGCTCACTCAGCG +
Preference number: 2 (lower is better)
Translates to: LLFLLLCISVLVHHMTEDFCQLA*SKAHSA
Trigger: CGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAA...GTCCTCAGTCATGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR-3UTR TCA 90 bp TCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGCTGAACATCACTTTTTaGATCCAGTTGTTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: SAVTQACTLHGSSCLFPKLNITF*IQLFEQ
Trigger: CTGCTCAAACAACTGGATTCAAAAAGTGATGTTCAG...CTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418994.1
3UTR-3UTR CCA 90 bp CTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACATGACTGAGGACACTGATTTTGCCAACTaGCTTGGTCAAAGGCTCACT +
Preference number: 2 (lower is better)
Translates to: LLFLLLCISVLVHHMTEDTDFAN*LGQRLT
Trigger: AGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGT...GTCCTCAGTCATGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR-3UTR TCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTTCTTACCAAACACCCTaGCAAGCACCAGATTCCACT +
Preference number: 2 (lower is better)
Translates to: MIEWEITSTIFILRHEHLSYQTP*QAPDST
Trigger: AGTGGAATCTGGTGCTTGTCAGGGTGTTTGGTAAGA...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR CCA 90 bp AAGGTACTAGGAATGATATTGAAGATCCCAGAAGGTATATTTTCTAATTCCAGGACTAATGTAAAGGTATaGGTGCCAGGTGTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: KVLGMILKIPEGIFSNSRTNVKV*VPGVVS
Trigger: GCTGACCACACCTGGCACCCATACCTTTACATTAGT...CCTGGAATTAGAAAATATACCTTCTGGGATCTTCAATATCATTCCTAGTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443567.5
3UTR-3UTR TCA 90 bp TTCTTGTTTAGGCAAAAAGGTACTAGGAATGATATTGAAGATCCCAGAAGGTATAGTAAAGCTGCATGCTaGATATACCCGAACCGTGTA +
Preference number: 2 (lower is better)
Translates to: FLFRQKGTRNDIEDPRRYSKAAC*IYPNRV
Trigger: TACACGGTTCGGGTATATTCAGCATGCAGCTTTACT...ATACCTTCTGGGATCTTCAATATCATTCCTAGTACCTTTTTGCCTAAACAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443567.5
3UTR-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATTCTGCTTACTGTCCTaGAGATTTGCGTCCTTATTT +
Preference number: 2 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALFCLLS*RFASLF
Trigger: AAATAAGGACGCAAATCTTCAGGACAGTAAGCAGAA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR GCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATCTTCAAAGTGCTATTaGCACAAGAGACTGAACGAT +
Preference number: 2 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALSSKCY*HKRLND
Trigger: ATCGTTCAGTCTCTTGTGGCAATAGCACTTTGAAGA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR TCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGATTTAATTCCATTCTaGTTGTTCTGCTTACTGTCC +
Preference number: 2 (lower is better)
Translates to: MIEWEITSTIFILRHEHLDLIPF*LFCLLS
Trigger: GGACAGTAAGCAGAACAATCAGAATGGAATTAAATC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR GCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAAAATGGCCCCTAAAATaGAAGCCAACTCTATATACA +
Preference number: 2 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALKWPLK*KPTLYT
Trigger: TGTATATAGAGTTGGCTTGCATTTTAGGGGCCATTT...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR GCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTACATTTGGTAACTAGTTaGCCAAGATGTATAGTAGAA +
Preference number: 2 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALHLVTS*PRCIVE
Trigger: TTCTACTATACATCTTGGGCAACTAGTTACCAAATG...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR CAA 90 bp CTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACATGACTGAGGACATTTTGCCAACTGGCTaGGTCAAAGGCTCACTCAGC +
Preference number: 3 (lower is better)
Translates to: LLFLLLCISVLVHHMTEDILPTG*VKGSLS
Trigger: GCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAAT...GTCCTCAGTCATGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR CCA 72 bp TTCCTTCTCTGCAGTAACCCAAGCGTGTACACTTCATaGGTCATCATGCCTGTTTCCAAAGATGCCATCTAC +
Preference number: 3 (lower is better)
Translates to: FLLCSNPSVYTS*VIMPVSKDAIY
Trigger: GTAGATGGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
3UTR TCA 72 bp TGGGTCATCATGCCTGTTTCCAAAGATGCCATCTACTaGACATCACTTTTTGAATCCAGTTGTTTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: WVIMPVSKDAIY*TSLFESSCLSR
Trigger: CCTGCTCAAACAACTGGATTCAAAAAGTGATGTTCAGTAGATGGCATCTTTGGAAACAGGCATGATGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418994.1
3UTR-3UTR CAA 90 bp GATCAGCACTCTTTGACTGAACTGCTGAATGTAGAGCTTGAACTCTTTCCAGATGAATATTTTCTAGGCTaGATCCTGCCATCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: DQHSLTELLNVELELFPDEYFLG*ILPSQH
Trigger: ATGCTGAGATGGCAGGATCAAGCCTAGAAAATATTC...ATCTGGAAAGAGTTCAAGCTCTACATTCAGCAGTTCAGTCAAAGAGTGCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418994.1
3UTR-3UTR CAA 90 bp CTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACATGACTGAGGACCTGTTTCAGTTTATTTaGCAGGACTTTATCAGCAGT +
Preference number: 3 (lower is better)
Translates to: LLFLLLCISVLVHHMTEDLFQFI*QDFISS
Trigger: ACTGCTGATAAAGTCCTGCAAAATAAACTGAAACAG...GTCCTCAGTCATGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457023.1
3UTR-3UTR CAA 90 bp AGGTCCTTCTTGTTTAGGCAAAAAGGTACTAGGAATGATATTGAAGATCCCAGAATTTTTGTGAGTCTCTaGGAAATTTCCACATCCTCC +
Preference number: 3 (lower is better)
Translates to: RSFLFRQKGTRNDIEDPRIFVSL*EISTSS
Trigger: GGAGGATGTGGAAATTTCCAAGAGACTCACAAAAAT...TCTGGGATCTTCAATATCATTCCTAGTACCTTTTTGCCTAAACAAGAAGGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443567.5
3UTR GCA 72 bp ATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTaGCCAAGATGTATAGTAGAATCAAGCAGGTTTAAC +
Preference number: 3 (lower is better)
Translates to: ISYGGTIHLVTS*PRCIVESSRFN
Trigger: GTTAAACCTGCTTGATTCTACTATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATACTGTCCTGAAGATTaGCGTCCTTATTTGAAGAAC +
Preference number: 3 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALYCPED*RPYLKN
Trigger: GTTCTTCAAATAAGGACGCAAATCTTCAGGACAGTA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR TCA 72 bp TACTGTCCTGAAGATTTGCGTCCTTATTTGAAGAACTaGTGTTTGGTAAGTATAAAAGCCAGTAACTTGAGA +
Preference number: 3 (lower is better)
Translates to: YCPEDLRPYLKN*CLVSIKASNLR
Trigger: TCTCAAGTTACTGGCTTTTATACTTACCAAACATCAGTTCTTCAAATAAGGACGCAAATCTTCAGGACAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR GCA 72 bp CTAATAAATTTGATGGCAGGGATTAGGTTTTTAGTTTaGATCCTGTACAAGATCTTTACCACAACAGGTTCA +
Preference number: 3 (lower is better)
Translates to: LINLMAGIRFLV*ILYKIFTTTGS
Trigger: TGAACCTGTTGTGGTAAAGATCTTGTACAGGATGCAAACTAAAAACCTAATCCCTGCCATCAAATTTATTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp TTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTGCCGCCAGACGGGCGAACTaGACAGCGTCCCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPTGLVKGSLSASALSSAARRAN*TASRSS
Trigger: ACTGGAGCGGGACGCTGTGCAGTTCGCCCGTCTGGC...GGCACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CCA 90 bp ATTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTGTGCTGTGGCGTCCATaGCGCAGTGGCCCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: ILPTGLVKGSLSASALSSVLWRP*RSGPAP
Trigger: CGGCGCGGGGCCACTGCGCCATGGACGCCACAGCAC...ACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR GCA 90 bp ATTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTAGCTCGCCTTCCCGTTaGCGGGCTGGGGTCCACCGC +
Preference number: 4 (lower is better)
Translates to: ILPTGLVKGSLSASALSSSSPSR*RAGVHR
Trigger: GCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCT...ACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CCA 90 bp CTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCTTCCCGTTGCCGGGCTaGGGTCCACCGCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLCSNPSVYTSWVIMPVSFPLPG*GPPRSR
Trigger: GCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAA...GGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp ATTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTTTCCCGTTGCCGGGCTaGGGTCCACCGCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: ILPTGLVKGSLSASALSSFPLPG*GPPRSR
Trigger: GCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAA...ACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CCA 90 bp GTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCAGTGCTGTGGCGTCCATaGCGCAGTGGCCCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: VTQACTLHGSSCLFPKMPVLWRP*RSGPAP
Trigger: CGGCGCGGGGCCACTGCGCCATGGACGCCACAGCAC...TGGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp TTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTGCCCGCTCCAGTGCTGTaGCGTCCATGGCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FCQLAWSKAHSALLLCLVPAPVL*RPWRSG
Trigger: GCCACTGCGCCATGGACGCCACAGCACTGGAGCGGG...CACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp AGCTTCCTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTCAGGGAAGGAGGCCCTaGCGCAGGACGGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: SFLLCSNPSVYTSWVIMPQGRRP*RRTALR
Trigger: GCGAAGAGCCGTCCTGCGTCAGGGCCTCCTTCCCTG...AGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR TCA 90 bp AGCTTCCTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTCCTTCGTGGTCGCGCTaGACCGCCAGACGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SFLLCSNPSVYTSWVIMPPSWSR*TARRAN
Trigger: GTTCGCCCGTCTGGCGGTTCAGCGCGACCACGAAGG...AGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR GCA 90 bp AGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCAGCTCGCCTTCCCGTTaGCGGGCTGGGGTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SNPSVYTSWVIMPVSKDASSPSR*RAGVHR
Trigger: GCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCT...GGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp CTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCGAGCTCCTTAGAAGCTaGGGCCGCCGAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLCSNPSVYTSWVIMPVSELLRS*GRRGQA
Trigger: AGCCTGGCCTCGGCGGCCCCAGCTTCTAAGGAGCTC...GGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp GCCATGGGGACCAGGATCTCCTTGGTCCTCGTAGCTCAATCAGTAACGGCCCAGTTCCTCAGAAAGCCATaGGGACCAGGATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AMGTRISLVLVAQSVTAQFLRKP*GPGSPW
Trigger: CCAAGGAGATCCTGGTCCCCATGGCTTTCTGAGGAA...CTGGGCCGTTACTGATTGAGCTACGAGGACCAAGGAGATCCTGGTCCCCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR GCA 90 bp TCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGAGCGTCCCGCTCCAGTaGTGTGGCGTCCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: SAVTQACTLHGSSCLFPKSVPLQ*CGVHGA
Trigger: TGCGCCATGGACGCCACAGCACTGGAGCGGGACGCT...CTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp TGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATCCCGCTCCAGTGCTGTaGCGTCCATGGCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CSNPSVYTSWVIMPVSKDPAPVL*RPWRSG
Trigger: GCCACTGCGCCATGGACGCCACAGCACTGGAGCGGG...ATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR GCA 90 bp TGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCAGACGGGCGAACTaGACAGCGTCCCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CSNPSVYTSWVIMPVSKDARRAN*TASRSS
Trigger: ACTGGAGCGGGACGCTGTGCAGTTCGCCCGTCTGGC...ATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGGTGCTGTGGCGTCCATaGCGCAGTGGCCCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRVLWRP*RSGPAP
Trigger: CGGCGCGGGGCCACTGCGCCATGGACGCCACAGCAC...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp TTACCTGAGTACTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACACAGGGAAGGAGGCCCTaGCGCAGGACGGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: LPEYFYFFCCVSLSLCITQGRRP*RRTALR
Trigger: GCGAAGAGCCGTCCTGCGTCAGGGCCTCCTTCCCTG...TGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAGTACTCAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR GCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGAGCTCGCCTTCCCGTTaGCGGGCTGGGGTCCACCGC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRSSPSR*RAGVHR
Trigger: GCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTACTTTGGACGGTaGAGGAGAGCTCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SFLLCSNPSVYTSWVIMPVYFGR*RRARLP
Trigger: GGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAAC...AGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp TTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTGCGGCAAAGTTTACTTTaGACGGTGGAGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: FCQLAWSKAHSALLLCLVRQSLL*TVEESS
Trigger: CGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCG...CACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGCAGGGAAGGAGGCCCTaGCGCAGGACGGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRQGRRP*RRTALR
Trigger: GCGAAGAGCCGTCCTGCGTCAGGGCCTCCTTCCCTG...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGCCTTCGTGGTCGCGCTaGACCGCCAGACGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRPSWSR*TARRAN
Trigger: GTTCGCCCGTCTGGCGGTTCAGCGCGACCACGAAGG...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp CTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCTGCAGCTTCCTTCTCTaGAGTAACCCAAGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: LLCSNPSVYTSWVIMPVSCSFLL*SNPSVY
Trigger: GTACACGCTTGGGTTACTGCAGAGAAGGAAGCTGCA...GGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATTCCCGTTGCCGGGCTaGGGTCCACCGCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALFPLPG*GPPRSR
Trigger: GCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCCGGCAAAGTTTACTTTaGACGGTGGAGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SNPSVYTSWVIMPVSKDARQSLL*TVEESS
Trigger: CGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCG...GGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
3UTR CAA 72 bp GGAGGTGGCTTTGGCTTAACACTTGTTGAACTGATTTaGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GGGFGLTLVELI*PTGLVKGSLSA
Trigger: AGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCCAAAGCCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR GCA 90 bp TCTGCTCTGTCTAGTGCCTGTCGAGCCAACTGTTTCAGTTTATTTTGCAGGACTGCCCAGTGGAAAATGTaGTCTCACTGGAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SALSSACRANCFSLFCRTAQWKM*SHWRWL
Trigger: AAGCCACCTCCAGTGAGAGCACATTTTCCACTGGGC...AGTCCTGCAAAATAAACTGAAACAGTTGGCTCGACAGGCACTAGACAGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACCCGCTCCAGTGCTGTaGCGTCCATGGCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIPAPVL*RPWRSG
Trigger: GCCACTGCGCCATGGACGCCACAGCACTGGAGCGGG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
3UTR CAA 72 bp GGCTTAACACTTGTTGAACTGATTTTGCCAACTGGCTaGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLTLVELILPTG*VKGSLSASALS
Trigger: AGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR GCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAAGCGTCCCGCTCCAGTaGTGTGGCGTCCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALSVPLQ*CGVHGA
Trigger: TGCGCCATGGACGCCACAGCACTGGAGCGGGACGCT...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAGCCAGACGGGCGAACTaGACAGCGTCCCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIARRAN*TASRSS
Trigger: ACTGGAGCGGGACGCTGTGCAGTTCGCCCGTCTGGC...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTACTGATTTTGCCAACTaGCTTGGTCAAAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: ILPTGLVKGSLSASALSSTDFAN*LGQRLT
Trigger: AGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGT...ACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp GTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCATGTGTAACAAGGAAATaGGCACGCTCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: VTQACTLHGSSCLFPKMPCVTRK*ARSKSN
Trigger: GTTGGACTTAGAGCGTGCTCATTTCCTTGTTACACA...TGGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR TCA 90 bp TCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGTTGAATCCAGTTGTTTaGGCAGGAGTTGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SAVTQACTLHGSSCLFPKLNPVV*AGVVSL
Trigger: CAGTGAAACAACTCCTGCTCAAACAACTGGATTCAA...CTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR GCA 90 bp AGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCGCCTGTTTCCAAAGATaGCATCTACTGAACATCACT +
Preference number: 4 (lower is better)
Translates to: SNPSVYTSWVIMPVSKDAACFQR*HLLNIT
Trigger: AGTGATGTTCAGTAGATGGCATCTTTGGAAACAGGC...GGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGGTTTACTTTGGACGGTaGAGGAGAGCTCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRVYFGR*RRARLP
Trigger: GGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAAC...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp TTACCTGAGTACTTCTATTTCTTCTGCTGTGTATCTCTGTCCTTGTGCATCACAGGGATTAGCGCCCAGTaGAAAATGTGCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LPEYFYFFCCVSLSLCITGISAQ*KMCSHW
Trigger: CCAGTGAGAGCACATTTTCCACTGGGCGCTAATCCC...TGTGATGCACAAGGACAGAGATACACAGCAGAAGAAATAGAAGTACTCAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp AGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCCTGAACATCACTTTTTaGATCCAGTTGTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNPSVYTSWVIMPVSKDALNITF*IQLFEQ
Trigger: CTGCTCAAACAACTGGATTCAAAAAGTGATGTTCAG...GGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR TCA 90 bp CTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCATCTACTaGACATCACTTTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: LLCSNPSVYTSWVIMPVSKDAIY*TSLFES
Trigger: GGATTCAAAAAGTGATGTTCAGTAGATGGCATCTTT...GGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp CTCCTTGGTCCTCGTAGCTCAATCAGTAACGGCCCAGTCTTTTCTATATGGAATATCAATGTATGGAGGTaGGTCAGCTGGGTAATAAAC +
Preference number: 4 (lower is better)
Translates to: LLGPRSSISNGPVFSIWNINVWR*VSWVIN
Trigger: GTTTATTACCCAGCTGACCCACCTCCATACATTGAT...ATTCCATATAGAAAAGACTGGGCCGTTACTGATTGAGCTACGAGGACCAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR GCA 90 bp GATCAGCACTCTTTGACTGAACTGCTGAATGTAGAGCTTGAACTCTTTCCAGATCTTCATGGGTCATCATaGCTGTTTCCAAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: DQHSLTELLNVELELFPDLHGSS*LFPKMP
Trigger: TGGCATCTTTGGAAACAGGCATGATGACCCATGAAG...ATCTGGAAAGAGTTCAAGCTCTACATTCAGCAGTTCAGTCAAAGAGTGCTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTTTTGCCAACTGGCTTaGTCAAAGGCTCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRFCQLA*SKAHSA
Trigger: CGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTTCCTCAGAAAGCCATaGGGACCAGGATCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRFLRKP*GPGSPR
Trigger: TCTAGGAGATCCTGGTCCCCATGGCTTTCTGAGGAA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp GATCAGCACTCTTTGACTGAACTGCTGAATGTAGAGCTTGAACTCTTTCCAGATGCTGAATGTAGAGCTTaGACTCTTTCCAGATACTCA +
Preference number: 4 (lower is better)
Translates to: DQHSLTELLNVELELFPDAECRA*TLSRYS
Trigger: TGAGTATCTGGAAAGAGTTCAAGCTCTACATTCAGC...ATCTGGAAAGAGTTCAAGCTCTACATTCAGCAGTTCAGTCAAAGAGTGCTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATGCACTGATGGCCAGTaGTGCCACAAAGGAGCAATC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALCTDGQ*CHKGAI
Trigger: GATTGCTCCTTTGTGGCATCACTGGCCATCAGTGCA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTGTCATCATTCCAGTTaGCGCAGTGATGAGGACATC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRCHHSS*RSDEDI
Trigger: GATGTCCTCATCACTGCGTCAACTGGAATGATGACA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGCCCAGTGGAAAATGTaGTCTCACTGGAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLAQWKM*SHWRWL
Trigger: AAGCCACCTCCAGTGAGAGCACATTTTCCACTGGGC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACGGCAAAGTTTACTTTaGACGGTGGAGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIRQSLL*TVEESS
Trigger: CGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGGGATTAGCGCCCAGTaGAAAATGTGCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLGISAQ*KMCSHW
Trigger: CCAGTGAGAGCACATTTTCCACTGGGCGCTAATCCC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGGTTGGTGAGGTCTTCTaGTCGTACCCACTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRVGEVF*SYPLGK
Trigger: TTTTCCAAGTGGGTACGACCAGAAGACCTCACCAAC...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTCAGCATATGCGTGTGTaGGAACCAGACCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLQHMRV*EPDPTS
Trigger: AGAAGTGGGGTCTGGTTCCCACACACGCATATGCTG...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAACCTCCAGTTTGTACTaGGGGTTGTTGGCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCITSSLY*GLLARL
Trigger: TAGCCTGGCCAACAACCCCCAGTACAAACTGGAGGT...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AGGTCCTTCTTGTTTAGGCAAAAAGGTACTAGGAATGATATTGAAGATCCCAGAACTAATGTAAAGGTATaGGTGCCAGGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RSFLFRQKGTRNDIEDPRTNVKV*VPGVVS
Trigger: GCTGACCACACCTGGCACCCATACCTTTACATTAGT...TCTGGGATCTTCAATATCATTCCTAGTACCTTTTTGCCTAAACAAGAAGGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR CCA 90 bp CAGGATCTCCTTGGTCCTCGTAGCTCAATCAGTAACGGCCCAGTCTTTTCTATATATGGAATTGGTAGATaGGGTTATTTTTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QDLLGPRSSISNGPVFSIYGIGR*GYFCES
Trigger: AGACTCACAAAAATAACCCCATCTACCAATTCCATA...TATAGAAAAGACTGGGCCGTTACTGATTGAGCTACGAGGACCAAGGAGATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR TCA 90 bp CTGTCGAGCCAACTGTTTCAGTTTATTTTGCAGGACTTTATCAGCAGTTTCATATGTGTAACAAGGAAATaGGCACGCTCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LSSQLFQFILQDFISSFICVTRK*ARSKSN
Trigger: GTTGGACTTAGAGCGTGCTCATTTCCTTGTTACACA...TATGAAACTGCTGATAAAGTCCTGCAAAATAAACTGAAACAGTTGGCTCGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGAGCAATTCTCCCTTGTaGTCAACAGGTAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRSNSPL*STGNWS
Trigger: TGACCAGTTACCTGTTGATCACAAGGGAGAATTGCT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGCAGCCAGTCAGTGCATaGAGATCAATATTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRQPVSA*RSILEL
Trigger: CAACTCCAATATTGATCTTCATGCACTGACTGGCTG...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp ATGGAATTGGTAGATGGGGTTATTTTTGTGAGTCTCTTGGAAATTTCCACATCCAGTAAAGCTGCATGCTaGATATACCCGAACCGTGTA +
Preference number: 4 (lower is better)
Translates to: MELVDGVIFVSLLEISTSSKAAC*IYPNRV
Trigger: TACACGGTTCGGGTATATTCAGCATGCAGCTTTACT...GGATGTGGAAATTTCCAAGAGACTCACAAAAATAACCCCATCTACCAATTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR GCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTCTTTCACAGGTCCTTaGTTAGCATCCCAAGTACTG +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRSFTGP*LASQVL
Trigger: CAGTACTTGGGATGCTAAGCAAGGACCTGTGAAAGA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATATGTACTGGGGGTTGTTaGCCAGGCTATAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCICTGGC*PGYRHL
Trigger: AAGATGCCTATAGCCTGGCCAACAACCCCCAGTACA...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGGAATTGGTAGATGGGGTTATTTTTGTGAGTCTCTTGGAAATTTCCACATCCAATTCCATCAATGTATaGAGGTGGGTCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: MELVDGVIFVSLLEISTSNSINV*RWVSWV
Trigger: TACCCAGCTGACCCACCTCCATACATTGATGGAATT...GGATGTGGAAATTTCCAAGAGACTCACAAAAATAACCCCATCTACCAATTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR TCA 90 bp CTGTCGAGCCAACTGTTTCAGTTTATTTTGCAGGACTTTATCAGCAGTTTCATATGGCTTAACACTTGTTaGACTGATTTTGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: LSSQLFQFILQDFISSFIWLNTC*TDFANW
Trigger: CCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCCA...TATGAAACTGCTGATAAAGTCCTGCAAAATAAACTGAAACAGTTGGCTCGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp AGATGTTTTCAGACAGAGATCCACAGCTTCTGTGTACAATTCTATAGCATCTTCGGACTTATAAATGACTaGGGTCTTTCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RCFQTEIHSFCVQFYSIFGLIND*GLSRKG
Trigger: TCCCTTCCTTGAAAGACCTCAGTCATTTATAAGTCC...GAAGATGCTATAGAATTGTACACAGAAGCTGTGGATCTCTGTCTGAAAACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATTTCATAAGCTGCACTaGTGGCCAGTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALFHKLH*WPVMPQ
Trigger: TTGTGGCATCACTGGCCATCAGTGCAGCTTATGAAA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTACCGTTGTCTATTTTCTaGGCTGTTCGGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALPLSIF*AVRGSK
Trigger: CTTTGATCCCCGAACAGCTCAGAAAATAGACAACGG...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp TTCTTGTTTAGGCAAAAAGGTACTAGGAATGATATTGAAGATCCCAGAAGGTATCCGTTGTCTATTTTCTaGGCTGTTCGGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: FLFRQKGTRNDIEDPRRYPLSIF*AVRGSK
Trigger: CTTTGATCCCCGAACAGCTCAGAAAATAGACAACGG...ATACCTTCTGGGATCTTCAATATCATTCCTAGTACCTTTTTGCCTAAACAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATCTTACCAAACACCCTaGCAAGCACCAGATTCCACT +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALSYQTP*QAPDST
Trigger: AGTGGAATCTGGTGCTTGTCAGGGTGTTTGGTAAGA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAATCCAAAACAGCATATaGGTGTGTGGGAACCAGACC +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIIQNSI*VCGNQT
Trigger: GGTCTGGTTCCCACACACGCATATGCTGTTTTGGAT...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAACTAATGTAAAGGTATaGGTGCCAGGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALTNVKV*VPGVVS
Trigger: GCTGACCACACCTGGCACCCATACCTTTACATTAGT...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATGTGTAACAAGGAAATaGGCACGCTCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALCVTRK*ARSKSN
Trigger: GTTGGACTTAGAGCGTGCTCATTTCCTTGTTACACA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAAGTAAAGCTGCATGCTaGATATACCCGAACCGTGTA +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCISKAAC*IYPNRV
Trigger: TACACGGTTCGGGTATATTCAGCATGCAGCTTTACT...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTTCTGCTTACTGTCCTaGAGATTTGCGTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRFCLLS*RFASLF
Trigger: AAATAAGGACGCAAATCTTCAGGACAGTAAGCAGAA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGAAGTGGGAATTTACATaGCACCAGTATCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRKWEFT*HQYLGN
Trigger: ATTGCCAAGATACTGGTGTCATGTAAATTCCCACTT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp AGATGTTTTCAGACAGAGATCCACAGCTTCTGTGTACAATTCTATAGCATCTTCTCAGCACTCTTTGACTaGACTTGTAATAAAACACCG +
Preference number: 4 (lower is better)
Translates to: RCFQTEIHSFCVQFYSIFSALFD*TCNKTP
Trigger: CGGTGTTTTATTACAAGTTCAGTCAAAGAGTGCTGA...GAAGATGCTATAGAATTGTACACAGAAGCTGTGGATCTCTGTCTGAAAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAACTGATTTTGCCAACTaGCTTGGTCAAAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCITDFAN*LGQRLT
Trigger: AGTGAGCCTTTGACCAAGCCAGTTGGCAAAATCAGT...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGAATTATCACCTTTCTTaGGACACCATTGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRNYHLS*DTIEVK
Trigger: CTTCACCTCAATGGTGTCCCAAGAAAGGTGATAATT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGATTGGAGTTGGATCCTaGAAAATCATATCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRIGVGS*KIISSH
Trigger: ATGGGAGGATATGATTTTCCAGGATCCAACTCCAAT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTCATAGCAATTCTTTCTaGTATCCAGCCAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLHSNSF*YPASQC
Trigger: GCACTGACTGGCTGGATACCAGAAAGAATTGCTATG...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTAATTCCATCAATGTATaGAGGTGGGTCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLNSINV*RWVSWV
Trigger: TACCCAGCTGACCCACCTCCATACATTGATGGAATT...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAGCTGAATGTAGAGCTTaGACTCTTTCCAGATACTCA +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALAECRA*TLSRYS
Trigger: TGAGTATCTGGAAAGAGTTCAAGCTCTACATTCAGC...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATGGCTTAACACTTGTTaGACTGATTTTGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALWLNTC*TDFANW
Trigger: CCAGTTGGCAAAATCAGTTCAACAAGTGTTAAGCCA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAGGACTTATAAATGACTaGGGTCTTTCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALGLIND*GLSRKG
Trigger: TCCCTTCCTTGAAAGACCTCAGTCATTTATAAGTCC...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAGGGACACCATTGAGGTaGAGTTTTACCATATACTTC +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIGTPLR*SFTIYF
Trigger: GAAGTATATGGTAAAACTTCACCTCAATGGTGTCCC...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGCTGTTCTCATTTACATaGAACACGACAGATGAAATC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRLFSFT*NTTDEI
Trigger: GATTTCATCTGTCGTGTTTCATGTAAATGAGAACAG...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp AGGTCCTTCTTGTTTAGGCAAAAAGGTACTAGGAATGATATTGAAGATCCCAGACCTGTGAATACATGTTaGTTCTTTAAAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: RSFLFRQKGTRNDIEDPRPVNTC*FFKKTW
Trigger: CCAGGTCTTTTTAAAGAATCAACATGTATTCACAGG...TCTGGGATCTTCAATATCATTCCTAGTACCTTTTTGCCTAAACAAGAAGGACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS-3UTR GCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGTGATAATGGTAGCTTaGCCCATCTATCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLVIMVA*PIYHRK
Trigger: CTTTCTGTGATAGATGGGGCAAGCTACCATTATCAC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGAAATGGCCCCTAAAATaGAAGCCAACTCTATATACA +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRKWPLK*KPTLYT
Trigger: TGTATATAGAGTTGGCTTGCATTTTAGGGGCCATTT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACAAGGATTTTTCAACTaGATAAATCGCAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIQGFFN*INRSPL
Trigger: CAAGGGGCTGCGATTTATCCAGTTGAAAAATCCTTG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAATCAATGTATGGAGGTaGGTCAGCTGGGTAATAAAC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALINVWR*VSWVIN
Trigger: GTTTATTACCCAGCTGACCCACCTCCATACATTGAT...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATTCTTGGGACACCATTaGGGTGAAGTTTTACCATAT +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALFLGHH*GEVLPY
Trigger: ATATGGTAAAACTTCACCTCAATGGTGTCCCAAGAA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACCTTTCCAACGTAAATaGCTCCAAGGATTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIPFQRK*LQGFFN
Trigger: GTTGAAAAATCCTTGGAGTCATTTACGTTGGAAAGG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTAGATTTCTCCATCACTaGAGTTGTGTGATCTTGATG +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLRFLHH*SCVILM
Trigger: CATCAAGATCACACAACTTCAGTGATGGAGAAATCT...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATTCTTGCTACATGATTaGATGGGAGATAACCTCAAC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALFLLHD*MGDNLN
Trigger: GTTGAGGTTATCTCCCATTCAATCATGTAGCAAGAA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTTATCCAGCCAGTCAGTaGATGAAGATCAATATTGGA +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLYPASQ*MKINIG
Trigger: TCCAATATTGATCTTCATGCACTGACTGGCTGGATA...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTATCACAGAAAGGCATTaGATAGGCAAAACGTTCTCT +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLITERH*IGKTFS
Trigger: AGAGAACGTTTTGCCTATCCAATGCCTTTCTGTGAT...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGGATCAATATTGGAGTTaGATCCTGGAAAATCATATC +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRDQYWS*ILENHI
Trigger: GATATGATTTTCCAGGATCCAACTCCAATATTGATC...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTGCTACATGATTGAATaGGAGATAACCTCAACAATT +
Preference number: 4 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRCYMIE*EITSTI
Trigger: AATTGTTGAGGTTATCTCCCATTCAATCATGTAGCA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAGAAAGTTTGGCTATCTaGATGCATAGCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIESLAI*MHSNSF
Trigger: GAAAGAATTGCTATGCATTCAGATAGCCAAACTTTC...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGCATCCCAAGTACTGTaGATACATGTTGATTCTTTA +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLASQVL*IHVDSL
Trigger: TAAAGAATCAACATGTATTCACAGTACTTGGGATGC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAGATTTAATTCCATTCTaGTTGTTCTGCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALDLIPF*LFCLLS
Trigger: GGACAGTAAGCAGAACAATCAGAATGGAATTAAATC...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR TCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTATTGCCACAAGAGACTaGACGATACAGCAATTTAAA +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLIATRD*TIQQFK
Trigger: TTTAAATTGCTGTATCGTTCAGTCTCTTGTGGCAAT...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATATCCTTACTGAAAGTTTaGCTATCTGAATGCATAGCA +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCISLLKV*LSECIA
Trigger: TGCTATGCATTCAGATAGCCAAACTTTCAGTAAGGA...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR GCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACATTTGGTAACTAGTTaGCCAAGATGTATAGTAGAA +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIHLVTS*PRCIVE
Trigger: TTCTACTATACATCTTGGGCAACTAGTTACCAAATG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTACATGAAGATCAATATTaGAGTTGGATCCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALHEDQY*SWILEN
Trigger: ATTTTCCAGGATCCAACTCCAATATTGATCTTCATG...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTTATGGAATTGGTAGATaGGGTTATTTTTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: MIEWEITSTIFILRHEHLYGIGR*GYFCES
Trigger: AGACTCACAAAAATAACCCCATCTACCAATTCCATA...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CCA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAATAGTAAACACTCAATaGTCAGTAACCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIIVNTQ*SVTCLL
Trigger: CAAAAGACAGGTTACTGACCATTGAGTGTTTACTAT...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 90 bp CGTCCATGGCGCAGTGGCCCCGCGCCGGGGCAGGGAAGGAGGCCCTaGCGCAGGACGGCTCTTCGCGGACTGCGGCGGCCCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: RPWRSGPAPGQGRRP*RRTALRGLRRPGGG
Trigger: GCCGCCGCCGGGCCGCCGCAGTCCGCGAAGAGCCGTCCTGCGTCAGGGCCTCCTTCCCTGCCCCGGCGCGGGGCCACTGCGCCATGGACG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS GCA 90 bp GCGCTGAACCGCCAGACGGGCGAACTGCACAGCGTCCCGCTCCAGTaGTGTGGCGTCCATGGCGCAGTGGCCCCGCGCCGGGGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: ALNRQTGELHSVPLQ*CGVHGAVAPRRGRE
Trigger: TTCCCTGCCCCGGCGCGGGGCCACTGCGCCATGGACGCCACAGCACTGGAGCGGGACGCTGTGCAGTTCGCCCGTCTGGCGGTTCAGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 90 bp GAACCGCCAGACGGGCGAACTGCACAGCGTCCCGCTCCAGTGCTGTaGCGTCCATGGCGCAGTGGCCCCGCGCCGGGGCAGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: EPPDGRTAQRPAPVL*RPWRSGPAPGQGRR
Trigger: CCTCCTTCCCTGCCCCGGCGCGGGGCCACTGCGCCATGGACGCCACAGCACTGGAGCGGGACGCTGTGCAGTTCGCCCGTCTGGCGGTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 90 bp TTTACTTTGGACGGTGGAGGAGAGCTCGCCTTCCCGTTGCCGGGCTaGGGTCCACCGCGAAGCCGCGCCCCTCAGCCCAGACCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: FTLDGGGELAFPLPG*GPPRSRAPQPRPGL
Trigger: CAAGCCGGGTCTGGGCTGAGGGGCGCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS GCA 90 bp CGGCAAAGTTTACTTTGGACGGTGGAGGAGAGCTCGCCTTCCCGTTaGCGGGCTGGGGTCCACCGCGAAGCCGCGCCCCTCAGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RQSLLWTVEESSPSR*RAGVHREAAPLSPD
Trigger: GTCTGGGCTGAGGGGCGCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 90 bp ACTCGGGAGCGCCGCGGAAGGAGCGGCAAAGTTTACTTTGGACGGTaGAGGAGAGCTCGCCTTCCCGTTGCCGGGCTGGGGTCCACCGCG +
Preference number: 5 (lower is better)
Translates to: TRERRGRSGKVYFGR*RRARLPVAGLGSTA
Trigger: CGCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCCTTCCGCGGCGCTCCCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 90 bp GGCGAGGACTCGGGAGCGCCGCGGAAGGAGCGGCAAAGTTTACTTTaGACGGTGGAGGAGAGCTCGCCTTCCCGTTGCCGGGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GEDSGAPRKERQSLL*TVEESSPSRCRAGV
Trigger: GACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCCTTCCGCGGCGCTCCCGAGTCCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS-3UTR CAA 90 bp AGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCGAGCTCGCCTTCCCGTaGCCGGGCTGGGGTCCACCG +
Preference number: 5 (lower is better)
Translates to: SNPSVYTSWVIMPVSKDAELAFP*PGWGPP
Trigger: CGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTC...GGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CAA 90 bp TCTGCTCTGTCTAGTGCCTGTCGAGCCAACTGTTTCAGTTTATTTTGCAGGACTGAGCTCGCCTTCCCGTaGCCGGGCTGGGGTCCACCG +
Preference number: 5 (lower is better)
Translates to: SALSSACRANCFSLFCRTELAFP*PGWGPP
Trigger: CGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTC...AGTCCTGCAAAATAAACTGAAACAGTTGGCTCGACAGGCACTAGACAGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGGAGCTCGCCTTCCCGTaGCCGGGCTGGGGTCCACCG +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRELAFP*PGWGPP
Trigger: CGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTC...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTTCTCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCGCGGCAAAGTTTACTTaGGACGGTGGAGGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LLCSNPSVYTSWVIMPVSAAKFT*DGGGEL
Trigger: GAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGC...GGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS TCA 90 bp GCCTCAGGACAAATCACAATTTTTCCAGGCTGTGGCTTCTGCATCTaGAAAAGGAATGGGTGGCAGCAGCTCCCAATGTCCCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: ASGQITIFPGCGFCI*KRNGWQQLPMSLSS
Trigger: TGATGAAAGGGACATTGGGAGCTGCTGCCACCCATTCCTTTTTCAGATGCAGAAGCCACAGCCTGGAAAAATTGTGATTTGTCCTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463417.5
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGGCGGCAAAGTTTACTTaGGACGGTGGAGGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRAAKFT*DGGGEL
Trigger: GAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGC...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp TCTGCAGTAACCCAAGCGTGTACACTTCATGGGTCATCATGCCTGTTTCCAAAGAAGGATCAGCACTCTTaGACTGAACTGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: SAVTQACTLHGSSCLFPKKDQHS*TELLNV
Trigger: TACATTCAGCAGTTCAGTCAAAGAGTGCTGATCCTT...CTTTGGAAACAGGCATGATGACCCATGAAGTGTACACGCTTGGGTTACTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CAA 90 bp TTTTGCCAACTGGCTTGGTCAAAGGCTCACTCAGCGCTTCTGCTCTGTCTAGTGATCTTCATCAAAAGCTaGTGTAACAAGGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: FCQLAWSKAHSALLLCLVIFIKS*CNKEMS
Trigger: GCTCATTTCCTTGTTACACAAGCTTTTGATGAAGAT...CACTAGACAGAGCAGAAGCGCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CAA 90 bp AGATCCCAGAAGGTATATTTTCTAATTCCAGGTAGCAAAACCCACACCTATAGTGGGACCAGGATCTCCTaGGTCCTCGTAGCTCAATCA +
Preference number: 5 (lower is better)
Translates to: RSQKVYFLIPGSKTHTYSGTRIS*VLVAQS
Trigger: TGATTGAGCTACGAGGACCAAGGAGATCCTGGTCCC...ACTATAGGTGTGGGTTTTGCTACCTGGAATTAGAAAATATACCTTCTGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS TCA 90 bp AACCAGACCCCACTTCTCTCCTTCAGCTTCTGTCATCATTCCAGTTaGCGCAGTGATGAGGACATCTCCTTTGTGAAATCTTTGATAAAG +
Preference number: 5 (lower is better)
Translates to: NQTPLLSFSFCHHSS*RSDEDISFVKSLIK
Trigger: CTTTATCAAAGATTTCACAAAGGAGATGTCCTCATCACTGCGTCAACTGGAATGATGACAGAAGCTGAAGGAGAGAAGTGGGGTCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253693.7
ENST00000415565.1
CDS-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTACACTGCACCTCCAGTTaGTACTGGGGGTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALHCTSS*YWGLLA
Trigger: GGCCAACAACCCCCAGTACAAACTGGAGGTGCAGTG...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTCCTTGGTCCTCGTAGCTCAATCAGTAACGGCCCAGTCTTTTCTATATGGAATATTTTTGTGAGTCTCTaGGAAATTTCCACATCCTCC +
Preference number: 5 (lower is better)
Translates to: LLGPRSSISNGPVFSIWNIFVSL*EISTSS
Trigger: GGAGGATGTGGAAATTTCCAAGAGACTCACAAAAAT...ATTCCATATAGAAAAGACTGGGCCGTTACTGATTGAGCTACGAGGACCAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443567.5
CDS TCA 90 bp CCAAAGATGCCATCTACTGAACATCACTTTTTGAATCCAGTTGTTTaGGCAGGAGTTGTTTCACTGAACCTTGTAATAAAACACCGCCTC +
Preference number: 5 (lower is better)
Translates to: PKMPSTEHHFLNPVV*AGVVSLNLVIKHRL
Trigger: GAGGCGGTGTTTTATTACAAGGTTCAGTGAAACAACTCCTGCTCAAACAACTGGATTCAAAAAGTGATGTTCAGTAGATGGCATCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS TCA 90 bp TACACTTCATGGGTCATCATGCCTGTTTCCAAAGATGCCATCTACTaGACATCACTTTTTGAATCCAGTTGTTTGAGCAGGAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: YTSWVIMPVSKDAIY*TSLFESSCLSRSCF
Trigger: GAAACAACTCCTGCTCAAACAACTGGATTCAAAAAGTGATGTTCAGTAGATGGCATCTTTGGAAACAGGCATGATGACCCATGAAGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CAA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATAATTTTGCCAACTGGCTaGGTCAAAGGCTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIILPTG*VKGSLS
Trigger: GCTGAGTGAGCCTTTGACCAAGCCAGTTGGCAAAAT...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTACTTCCCACATGGATaGTATTCTGGTTCACCATCC +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRYFPHG*YSGSPS
Trigger: GGATGGTGAACCAGAATACAATCCATGTGGGAAGTA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGATCTTTCACAGGTCCTaGCTTAGCATCCCAAGTACT +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRIFHRS*LSIPST
Trigger: AGTACTTGGGATGCTAAGCAAGGACCTGTGAAAGAT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp AGATGTTTTCAGACAGAGATCCACAGCTTCTGTGTACAATTCTATAGCATCTTCCTTGTTGAACTGATTTaGCCAACTGGCTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: RCFQTEIHSFCVQFYSIFLVELI*PTGLVK
Trigger: TTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAG...GAAGATGCTATAGAATTGTACACAGAAGCTGTGGATCTCTGTCTGAAAACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTATCACAGAAAGGCATaGGATAGGCAAAACGTTCTC +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRYHRKA*DRQNVL
Trigger: GAGAACGTTTTGCCTATCCAATGCCTTTCTGTGATA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTTCACCATCCTTGTTTaGAGGGTAAATTATGCCGGT +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRFTILV*RVNYAG
Trigger: ACCGGCATAATTTACCCTCAAAACAAGGATGGTGAA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACAACGCTATATTGCCTaGGTCCTCGTAGCTCAATCA +
Preference number: 5 (lower is better)
Translates to: KISYGGTIHLVTSCPRCIQRYIA*VLVAQS
Trigger: TGATTGAGCTACGAGGACCAAGGCAATATAGCGTTG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTTCTTCAAAGTGCTATaGCCACAAGAGACTGAACGA +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRFFKVL*PQETER
Trigger: TCGTTCAGTCTCTTGTGGCAATAGCACTTTGAAGAA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CCAACTGATGTTTTGACTTCAAAGGATCAGCACTCTTTGACTGAACTGCTGAATATCTTCATCAAAAGCTaGTGTAACAAGGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: PTDVLTSKDQHSLTELLNIFIKS*CNKEMS
Trigger: GCTCATTTCCTTGTTACACAAGCTTTTGATGAAGAT...ATTCAGCAGTTCAGTCAAAGAGTGCTGATCCTTTGAAGTCAAAACATCAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAGGTGATAATGGTAGCTaGCCCCATCTATCACAGAAA +
Preference number: 5 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALGDNGS*PHLSQK
Trigger: TTTCTGTGATAGATGGGGCAAGCTACCATTATCACC...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAATCATTGTAGGATTGTaGGTGAGGTCTTCTGGTCGT +
Preference number: 5 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALIIVGL*VRSSGR
Trigger: ACGACCAGAAGACCTCACCAACAATCCTACAATGAT...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGTATATCATTGTAGGATaGTTGGTGAGGTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRYIIVG*LVRSSG
Trigger: ACCAGAAGACCTCACCAACAATCCTACAATGATATA...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTAAAATGCAAGCCAACTCTATATACACAAAACCATGTAAACGGTACCTCTAGGATAAATCGCAGCCCCTaGAACTCTCTAATATCCAAA +
Preference number: 5 (lower is better)
Translates to: LKCKPTLYTQNHVNGTSRINRSP*NSLISK
Trigger: TTTGGATATTAGAGAGTTCAAGGGGCTGCGATTTAT...CCTAGAGGTACCGTTTACATGGTTTTGTGTATATAGAGTTGGCTTGCATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTATCTCCATCACTGAAGTaGTGTGATCTTGATGGGGAT +
Preference number: 5 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALSPSLK*CDLDGD
Trigger: ATCCCCATCAAGATCACACAACTTCAGTGATGGAGA...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGGTGGCACAATTCATTaGGTAACTAGTTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: MIEWEITSTIFILRHEHLGGTIH*VTSCPR
Trigger: TCTTGGGCAACTAGTTACCAAATGAATTGTGCCACC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 90 bp ATAAAGCATTCTGAAAGAATTATCCTTACTGAAAGTTTGGCTATCTaGATGCATAGCAATTCTTTCTGGTATCCAGCCAGTCAGTGCATG +
Preference number: 5 (lower is better)
Translates to: IKHSERIILTESLAI*MHSNSFWYPASQCM
Trigger: CATGCACTGACTGGCTGGATACCAGAAAGAATTGCTATGCATTCAGATAGCCAAACTTTCAGTAAGGATAATTCTTTCAGAATGCTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253693.7
ENST00000415565.1
CDS-3UTR CAA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTGAATATTTTCTAGGCTaGATCCTGCCATCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: MIEWEITSTIFILRHEHLEYFLG*ILPSQH
Trigger: ATGCTGAGATGGCAGGATCAAGCCTAGAAAATATTC...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTAAGGATCAGCACTCTTaGACTGAACTGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: MIEWEITSTIFILRHEHLKDQHS*TELLNV
Trigger: TACATTCAGCAGTTCAGTCAAAGAGTGCTGATCCTT...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CTGTCGAGCCAACTGTTTCAGTTTATTTTGCAGGACTTTATCAGCAGTTTCATACTGTTTCAGTTTATTTaGCAGGACTTTATCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LSSQLFQFILQDFISSFILFQFI*QDFISS
Trigger: ACTGCTGATAAAGTCCTGCAAAATAAACTGAAACAG...TATGAAACTGCTGATAAAGTCCTGCAAAATAAACTGAAACAGTTGGCTCGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457023.1
CDS-3UTR CAA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATACTTGTTGAACTGATTTaGCCAACTGGCTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: KISYGGTIHLVTSCPRCILVELI*PTGLVK
Trigger: TTTGACCAAGCCAGTTGGCAAAATCAGTTCAACAAG...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 90 bp TGTTCTGCTTACTGTCCTGAAGATTTGCGTCCTTATTTGAAGAACTaGTGTTTGGTAAGTATAAAAGCCAGTAACTTGAGATTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: CSAYCPEDLRPYLKN*CLVSIKASNLRFLH
Trigger: ATGGAGAAATCTCAAGTTACTGGCTTTTATACTTACCAAACATCAGTTCTTCAAATAAGGACGCAAATCTTCAGGACAGTAAGCAGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253693.7
ENST00000463417.5
CDS-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTAATTTTTGTGAGTCTCTaGGAAATTTCCACATCCTCC +
Preference number: 5 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALIFVSL*EISTSS
Trigger: GGAGGATGTGGAAATTTCCAAGAGACTCACAAAAAT...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTTACTGTCCTGAAGATTaGCGTCCTTATTTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: MIEWEITSTIFILRHEHLYCPED*RPYLKN
Trigger: GTTCTTCAAATAAGGACGCAAATCTTCAGGACAGTA...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp AAAATCAGTTATGGTGGCACAATTCATTTGGTAACTAGTTGCCCAAGATGTATATCAGTAACCTGTCTTTaGAAGCTTTACCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: KISYGGTIHLVTSCPRCISVTCL*KLYLQG
Trigger: ACCTTGAAGGTAAAGCTTCAAAAGACAGGTTACTGA...TATACATCTTGGGCAACTAGTTACCAAATGAATTGTGCCACCATAACTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 90 bp TGTTTGGTAAGTATAAAAGCCAGTAACTTGAGATTTCTCCATCACTaGAGTTGTGTGATCTTGATGGGGATAATACTATTAAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: CLVSIKASNLRFLHH*SCVILMGIILLKSK
Trigger: CTTGGACTTTAATAGTATTATCCCCATCAAGATCACACAACTTCAGTGATGGAGAAATCTCAAGTTACTGGCTTTTATACTTACCAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000463417.5
ENST00000472400.1
CDS-3UTR CAA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTATCTTCATCAAAAGCTaGTGTAACAAGGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: MIEWEITSTIFILRHEHLIFIKS*CNKEMS
Trigger: GCTCATTTCCTTGTTACACAAGCTTTTGATGAAGAT...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp CCAAAATTAATCTTTCCCTTATTCATACACTGGTGGCATGTTTTTAGAGCTCTACTGTTTCAGTTTATTTaGCAGGACTTTATCAGCAGT +
Preference number: 5 (lower is better)
Translates to: PKLIFPLFIHWWHVFRALLFQFI*QDFISS
Trigger: ACTGCTGATAAAGTCCTGCAAAATAAACTGAAACAG...TAGAGCTCTAAAAACATGCCACCAGTGTATGAATAAGGGAAAGATTAATTTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS-3UTR CAA 90 bp ATGATTGAATGGGAGATAACCTCAACAATTTTCATTCTTAGGCATGAGCATCTTTTCGCAAAATCATCCTaGTCTGTTATGTGTCTACTA +
Preference number: 5 (lower is better)
Translates to: MIEWEITSTIFILRHEHLFAKSS*SVMCLL
Trigger: TAGTAGACACATAACAGACAAGGATGATTTTGCGAA...AAGATGCTCATGCCTAAGAATGAAAATTGTTGAGGTTATCTCCCATTCAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS CCA 72 bp GACGGGCGAACTGCACAGCGTCCCGCTCCAGTGCTGTaGCGTCCATGGCGCAGTGGCCCCGCGCCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: DGRTAQRPAPVL*RPWRSGPAPGQ
Trigger: CTGCCCCGGCGCGGGGCCACTGCGCCATGGACGCCACAGCACTGGAGCGGGACGCTGTGCAGTTCGCCCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS GCA 72 bp TTACTTTGGACGGTGGAGGAGAGCTCGCCTTCCCGTTaGCGGGCTGGGGTCCACCGCGAAGCCGCGCCCCTC +
Preference number: 6 (lower is better)
Translates to: LLWTVEESSPSR*RAGVHREAAPL
Trigger: GAGGGGCGCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CAA 90 bp GCGGCAAAGTTTACTTTGGACGGTGGAGGAGAGCTCGCCTTCCCGTaGCCGGGCTGGGGTCCACCGCGAAGCCGCGCCCCTCAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: AAKFTLDGGGELAFP*PGWGPPRSRAPQPR
Trigger: TCTGGGCTGAGGGGCGCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CAA 90 bp CGGCGAGGACTCGGGAGCGCCGCGGAAGGAGCGGCAAAGTTTACTTaGGACGGTGGAGGAGAGCTCGCCTTCCCGTTGCCGGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: RRGLGSAAEGAAKFT*DGGGELAFPLPGWG
Trigger: ACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCCTTCCGCGGCGCTCCCGAGTCCTCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CAA 72 bp TTTACTTTGGACGGTGGAGGAGAGCTCGCCTTCCCGTaGCCGGGCTGGGGTCCACCGCGAAGCCGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: FTLDGGGELAFP*PGWGPPRSRAP
Trigger: AGGGGCGCGGCTTCGCGGTGGACCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 72 bp CGCCGCGGAAGGAGCGGCAAAGTTTACTTTGGACGGTaGAGGAGAGCTCGCCTTCCCGTTGCCGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RRGRSGKVYFGR*RRARLPVAGLG
Trigger: CCCCAGCCCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCCTTCCGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 72 bp TCGGGAGCGCCGCGGAAGGAGCGGCAAAGTTTACTTTaGACGGTGGAGGAGAGCTCGCCTTCCCGTTGCCGG +
Preference number: 6 (lower is better)
Translates to: SGAPRKERQSLL*TVEESSPSRCR
Trigger: CCGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCCTTCCGCGGCGCTCCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CAA 72 bp CTCGGGAGCGCCGCGGAAGGAGCGGCAAAGTTTACTTaGGACGGTGGAGGAGAGCTCGCCTTCCCGTTGCCG +
Preference number: 6 (lower is better)
Translates to: LGSAAEGAAKFT*DGGGELAFPLP
Trigger: CGGCAACGGGAAGGCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCCTTCCGCGGCGCTCCCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000418994.1
ENST00000457023.1
CDS CCA 72 bp GTGGACACTGCACCTCCAGTTTGTACTGGGGGTTGTTaGCCAGGCTATAGGCATCTTTCACAGGTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: VDTAPPVCTGGC*PGYRHLSQVLA
Trigger: AGCAAGGACCTGTGAAAGATGCCTATAGCCTGGCCAACAACCCCCAGTACAAACTGGAGGTGCAGTGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS CCA 72 bp AGGTTTAATGAGCTGGGAACTGAGAAGCTAGGGGTCTaGTCTTGGCTTTCTCTGCTAGTAACTGTATGCCTC +
Preference number: 6 (lower is better)
Translates to: RFNELGTEKLGV*SWLSLLVTVCL
Trigger: GAGGCATACAGTTACTAGCAGAGAAAGCCAAGACCAGACCCCTAGCTTCTCAGTTCCCAGCTCATTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463417.5
CDS TCA 72 bp ATTAAAACGTCTTTCATAAGCTGCACTGATGGCCAGTaGTGCCACAAAGGAGCAATCCGATACTATTGTCTG +
Preference number: 6 (lower is better)
Translates to: IKTSFISCTDGQ*CHKGAIRYYCL
Trigger: CAGACAATAGTATCGGATTGCTCCTTTGTGGCATCACTGGCCATCAGTGCAGCTTATGAAAGACGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253693.7
ENST00000415565.1
CDS CAA 72 bp ATGCTAAAACTGGACACAGTATATATCATTGTAGGATaGTTGGTGAGGTCTTCTGGTCGTACCCACTTGGAA +
Preference number: 6 (lower is better)
Translates to: MLKLDTVYIIVG*LVRSSGRTHLE
Trigger: TTCCAAGTGGGTACGACCAGAAGACCTCACCAACAATCCTACAATGATATATACTGTGTCCAGTTTTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS CAA 90 bp GTCTGCTTTATGCTAAAACTGGACACAGTATATATCATTGTAGGATaGTTGGTGAGGTCTTCTGGTCGTACCCACTTGGAAAATGTAGTT +
Preference number: 6 (lower is better)
Translates to: VCFMLKLDTVYIIVG*LVRSSGRTHLENVV
Trigger: AACTACATTTTCCAAGTGGGTACGACCAGAAGACCTCACCAACAATCCTACAATGATATATACTGTGTCCAGTTTTAGCATAAAGCAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 72 bp ACTGGTCATCAATTATCACCTTTCTTGGGACACCATTaGGGTGAAGTTTTACCATATACTTCCCACATGGAT +
Preference number: 6 (lower is better)
Translates to: TGHQLSPFLGHH*GEVLPYTSHMD
Trigger: ATCCATGTGGGAAGTATATGGTAAAACTTCACCTCAATGGTGTCCCAAGAAAGGTGATAATTGATGACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS CCA 72 bp AGTCAGTGCATGAAGATCAATATTGGAGTTGGATCCTaGAAAATCATATCCTCCCATGACTTTCATGTATGC +
Preference number: 6 (lower is better)
Translates to: SQCMKINIGVGS*KIISSHDFHVC
Trigger: GCATACATGAAAGTCATGGGAGGATATGATTTTCCAGGATCCAACTCCAATATTGATCTTCATGCACTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253693.7
ENST00000415565.1
CDS CAA 72 bp CTAAAACTGGACACAGTATATATCATTGTAGGATTGTaGGTGAGGTCTTCTGGTCGTACCCACTTGGAAAAT +
Preference number: 6 (lower is better)
Translates to: LKLDTVYIIVGL*VRSSGRTHLEN
Trigger: ATTTTCCAAGTGGGTACGACCAGAAGACCTCACCAACAATCCTACAATGATATATACTGTGTCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS CAA 90 bp TGCTTTATGCTAAAACTGGACACAGTATATATCATTGTAGGATTGTaGGTGAGGTCTTCTGGTCGTACCCACTTGGAAAATGTAGTTTTT +
Preference number: 6 (lower is better)
Translates to: CFMLKLDTVYIIVGL*VRSSGRTHLENVVF
Trigger: AAAAACTACATTTTCCAAGTGGGTACGACCAGAAGACCTCACCAACAATCCTACAATGATATATACTGTGTCCAGTTTTAGCATAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 72 bp TCATCAATTATCACCTTTCTTGGGACACCATTGAGGTaGAGTTTTACCATATACTTCCCACATGGATTGTAT +
Preference number: 6 (lower is better)
Translates to: SSIITFLGTPLR*SFTIYFPHGLY
Trigger: ATACAATCCATGTGGGAAGTATATGGTAAAACTTCACCTCAATGGTGTCCCAAGAAAGGTGATAATTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253693.7
CDS TCA 72 bp TCTGAAAGAATTATCCTTACTGAAAGTTTGGCTATCTaGATGCATAGCAATTCTTTCTGGTATCCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: SERIILTESLAI*MHSNSFWYPAS
Trigger: ACTGGCTGGATACCAGAAAGAATTGCTATGCATTCAGATAGCCAAACTTTCAGTAAGGATAATTCTTTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253693.7
ENST00000415565.1
CDS TCA 72 bp CCATCTACTGAACATCACTTTTTGAATCCAGTTGTTTaGGCAGGAGTTGTTTCACTGAACCTTGTAATAAAA +
Preference number: 6 (lower is better)
Translates to: PSTEHHFLNPVV*AGVVSLNLVIK
Trigger: TTTTATTACAAGGTTCAGTGAAACAACTCCTGCTCAAACAACTGGATTCAAAAAGTGATGTTCAGTAGATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418994.1
CDS TCA 72 bp AGTATAAAAGCCAGTAACTTGAGATTTCTCCATCACTaGAGTTGTGTGATCTTGATGGGGATAATACTATTA +
Preference number: 6 (lower is better)
Translates to: SIKASNLRFLHH*SCVILMGIILL
Trigger: TAATAGTATTATCCCCATCAAGATCACACAACTTCAGTGATGGAGAAATCTCAAGTTACTGGCTTTTATACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253693.7
ENST00000463417.5
ENST00000472400.1