RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000149260

Ensembl transcript IDs: ENST00000456580.6, ENST00000527066.5, ENST00000527129.1, ENST00000529629.5, ENST00000531028.2, ENST00000533889.1, ENST00000648180.1, ENST00000648752.1

Found 763 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAACCCTGTGGTGGATCCTGAGAAGAGGGAAGCCTAGGTCTGGGTaGTGTGGGCTGGAGGCCCTACCCACCTGCAAATGGGGACTCCCA +
Preference number: 1 (lower is better)
Translates to: LTLWWILRRGKPRSG*CGLEALPTCKWGLP
Trigger: TGGGAGTCCCCATTTGCAGGTGGGTAGGGCCTCCAGCCCACACCACCCAGACCTAGGCTTCCCTCTTCTCAGGATCCACCACAGGGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR CCA 90 bp ACACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTaGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAG +
Preference number: 1 (lower is better)
Translates to: TPGLEAREGHSRDPK*VTAPVLTKSSPEDQ
Trigger: CTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR GCA 90 bp CCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCACCAGTaGTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTGGAGCCAAG +
Preference number: 1 (lower is better)
Translates to: PEKGTAEIPSGSRHQ*SRRVLQRTSKTGAK
Trigger: CTTGGCTCCAGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR CCA 90 bp GGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTaGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCTCCTCG +
Preference number: 1 (lower is better)
Translates to: GLGLGHEGQERSLGM*QFVCKQVTSSWRSS
Trigger: CGAGGAGCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR TCA 90 bp ACTTGCTCCCAGTCATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTaGGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCT +
Preference number: 1 (lower is better)
Translates to: TCSQSCRVPAPGPGS*GEVPAFKKEHSYPP
Trigger: AGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCATGACTGGGAGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR TCA 90 bp CATATGGCCCAGGGCCAAGACCCAGGAGCAAAGCCAGACACAGAGTaGGGAGGCAAAATCAGAGAATCCAGCACCTCCAGCCAGAACACT +
Preference number: 1 (lower is better)
Translates to: HMAQGQDPGAKPDTE*GGKIRESSTSSQNT
Trigger: AGTGTTCTGGCTGGAGGTGCTGGATTCTCTGATTTTGCCTCCTCACTCTGTGTCTGGCTTTGCTCCTGGGTCTTGGCCCTGGGCCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR GCA 90 bp CCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCACCAGTaGTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTGCATATTTT +
Preference number: 1 (lower is better)
Translates to: PEKGTAEIPSGSRHQ*SRRVLQRTSKTAYF
Trigger: AAAATATGCAGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531028.2
3UTR CCA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATaGCCCAGGGCCAAGACCCAGGAGCAAAGCCAGACACAGAGTGAG +
Preference number: 1 (lower is better)
Translates to: RTLLSSLSFISWPLI*PRAKTQEQSQTQSE
Trigger: CTCACTCTGTGTCTGGCTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR TCA 90 bp TTCTCCAGAGGACCAGCAAAACTGCATATTTTCCCAATTCCAGCCTaGGCAGGAACCCGGCAGGAGCCAAGAGTCCTTTCAAGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: FSRGPAKLHIFPIPA*AGTRQEPRVLSRWE
Trigger: CTCCCACCTTGAAAGGACTCTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTGCTGGTCCTCTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
3UTR CCA 90 bp GGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTaGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGCCAG +
Preference number: 1 (lower is better)
Translates to: GFQERTLLSSLSFIS*PLIWPRAKTQEQSQ
Trigger: CTGGCTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR TCA 90 bp GTGAGGAGGCAAAATCAGAGAATCCAGCACCTCCAGCCAGAACACTaGTCCAGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: VRRQNQRIQHLQPEH*SRQQDLESESQVPK
Trigger: TTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCTGGATCAGTGTTCTGGCTGGAGGTGCTGGATTCTCTGATTTTGCCTCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CCA 90 bp CTTACTCAGCACTCGGTAGTAACAGTGCTGACACACAAGAATCATTaGCCCCACTTTGTAGAAGGGGGAAATCGAGGCACAGGAGGTTTA +
Preference number: 1 (lower is better)
Translates to: LTQHSVVTVLTHKNH*PHFVEGGNRGTGGL
Trigger: TAAACCTCCTGTGCCTCGATTTCCCCCTTCTACAAAGTGGGGCCAATGATTCTTGTGTGTCAGCACTGTTACTACCGAGTGCTGAGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CCA 90 bp GGGCAGGAAGCAAGGGTAGCACTGTGGAACCTGTTTTTGTCAGGGGGTGGCAGGGGGGAAAGTGAGGTCTaGGAGGCTGGGTTGGGCCTA +
Preference number: 2 (lower is better)
Translates to: GQEARVALWNLFLSGGGRGESEV*EAGLGL
Trigger: TAGGCCCAACCCAGCCTCCCAGACCTCACTTTCCCC...CCTGCCACCCCCTGACAAAAACAGGTTCCACAGTGCTACCCTTGCTTCCTGCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR TCA 90 bp AGCTGGGGTCTTACAGCAGAGAGGCTCTGGGAGCACATCTCCCCTTCTGGTCCCCTCCAGCCAGAACACTaGTCCAGACAGCAGGATCTG +
Preference number: 2 (lower is better)
Translates to: SWGLTAERLWEHISPSGPLQPEH*SRQQDL
Trigger: CAGATCCTGCTGTCTGGATCAGTGTTCTGGCTGGAG...GGGACCAGAAGGGGAGATGTGCTCCCAGAGCCTCTCTGCTGTAAGACCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR GCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCCAAAGGCCCCCAGCTaGCTGGCCCCTGGCCCACTA +
Preference number: 2 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILPKAPS*LAPGPL
Trigger: TAGTGGGCCAGGGGCCAGGCAGCTGGGGGCCTTTGG...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGVGTCR*WWERSE
Trigger: CTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR CAA 90 bp GACTTGCTCCCAGTCATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTaGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCC +
Preference number: 2 (lower is better)
Translates to: DLLPVMQSPGPRPRF*RGSPGFQERTLLSS
Trigger: GGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCATGACTGGGAGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR TCA 90 bp AGCTGGGGTCTTACAGCAGAGAGGCTCTGGGAGCACATCTCCCCTTCTGGTCCCAGCAGTGGTGACAGTTaGGGTGGGGAGGACTATTTG +
Preference number: 2 (lower is better)
Translates to: SWGLTAERLWEHISPSGPSSGDS*GGEDYL
Trigger: CAAATAGTCCTCCCCACCTCAACTGTCACCACTGCT...GGGACCAGAAGGGGAGATGTGCTCCCAGAGCCTCTCTGCTGTAAGACCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp AGCTGGGGTCTTACAGCAGAGAGGCTCTGGGAGCACATCTCCCCTTCTGGTCCCAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: SWGLTAERLWEHISPSGPKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...GGGACCAGAAGGGGAGATGTGCTCCCAGAGCCTCTCTGCTGTAAGACCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR TCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGCAAATCTCCACTGAGTaGGGAAATGGATGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKQISTE*GNGWVR
Trigger: TCTCACCCATCCATTTCCTCACTCAGTGGAGATTTG...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
3UTR-3UTR CCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACAAGTGACATCTTCTTaGCGCTCCTCGGCAGACAGC +
Preference number: 2 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRQVTSS*RSSADS
Trigger: GCTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTG...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CCA 90 bp GCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGGACAAGCAGAGATCCCAAGTaGGTCACGGCACCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: AGSGVGKSGSQKEIPARTSRDPK*VTAPVL
Trigger: GAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCT...TGTCCTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CAA 90 bp TTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTaGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACC +
Preference number: 2 (lower is better)
Translates to: LRGSPGFQERTLLSS*SFISWPLIWPRAKT
Trigger: GGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR GCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR GCA 90 bp CTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGACTGCACTTTTTCATTTaGTACACCTGGTCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LLVVHFLAPHMAQGQDPGLHFFI*YTWSGS
Trigger: GCTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAG...TCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CCA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACAAGTGACATCTTCTTaGCGCTCCTCGGCAGACAGC +
Preference number: 2 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQQVTSS*RSSADS
Trigger: GCTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
3UTR-3UTR GCA 90 bp GATTTATTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTGGTGGATCCTGGGGTCACGGCACCAGTaGTCACGAAGAGTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: DLLRIEQASCPLTLWWILGSRHQ*SRRVLQ
Trigger: CTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCC...CAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAATAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCCACACAGCAAGTCAGTaGAAGAGTGGGAAAAGGACC +
Preference number: 2 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRHTASQ*KSGKRT
Trigger: GGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR GCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACGGAGCTTGGGGATGTaGCAGTTCGTGTGTAAACAA +
Preference number: 2 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQRSLGM*QFVCKQ
Trigger: TTGTTTACACACGAACTGCCACATCCCCAAGCTCCG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531028.2
3UTR CAA 90 bp CCTTACTCAGCACTCGGTAGTAACAGTGCTGACACACAAGAATCATaGGCCCCACTTTGTAGAAGGGGGAAATCGAGGCACAGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: PYSALGSNSADTQES*APLCRRGKSRHRRF
Trigger: AAACCTCCTGTGCCTCGATTTCCCCCTTCTACAAAGTGGGGCCAATGATTCTTGTGTGTCAGCACTGTTACTACCGAGTGCTGAGTAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR TCA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGTCGTGTGTAAACAAGTaGCATCTTCTTGGCGCTCCT +
Preference number: 2 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKSCVNK*HLLGAP
Trigger: AGGAGCGCCAAGAAGATGTCACTTGTTTACACACGA...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR GCA 90 bp AATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: NVTCIFSQFQPEQEPGRSGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...GCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp GGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCGGCAAGAACGGAGCTTaGGGATGTGGCAGTTCGTGT +
Preference number: 2 (lower is better)
Translates to: GSPGFQERTLLSSLSFISGKNGA*GCGSSC
Trigger: ACACGAACTGCCACATCCCCAAGCTCCGTTCTTGCC...GGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR TCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACT +
Preference number: 2 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILVGRTI*NLSKET
Trigger: AGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCAC...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR TCA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACT +
Preference number: 2 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKVGRTI*NLSKET
Trigger: AGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCAC...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR TCA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAATCGTGTGTAAACAAGTaGCATCTTCTTGGCGCTCCT +
Preference number: 2 (lower is better)
Translates to: RQQDLESESQVPKRKSQQSCVNK*HLLGAP
Trigger: AGGAGCGCCAAGAAGATGTCACTTGTTTACACACGA...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR GCA 90 bp ACAAATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: TNVTCIFSQFQPEQEPGRGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...CCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CCA 90 bp GATTTATTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTGGTGGATCCTGTTCATTTGCTACACCTaGTCTGGAAGCCCGAGAAGG +
Preference number: 2 (lower is better)
Translates to: DLLRIEQASCPLTLWWILFICYT*SGSPRR
Trigger: CCTTCTCGGGCTTCCAGACCAGGTGTAGCAAATGAA...CAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CCA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCCAGACAGCAGGATCTaGAGTCGGAAAGTCAGGTTC +
Preference number: 2 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFPDSRI*SRKVRF
Trigger: GAACCTGACTTTCCGACTCCAGATCCTGCTGTCTGG...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CAA 90 bp AAGGACACAGGGATTCCTGTTCTTGAATTAACTGCACTTTTTCATTaGCTACACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATC +
Preference number: 2 (lower is better)
Translates to: KDTGIPVLELTALFH*LHLVWKPEKGTAEI
Trigger: GATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAGTTAATTCAAGAACAGGAATCCCTGTGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR TCA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCTTGGCAAATCTCCACTaGGTGAGGAAATGGATGGGT +
Preference number: 2 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFLANLH*VRKWMG
Trigger: ACCCATCCATTTCCTCACTCAGTGGAGATTTGCCAA...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR GCA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGAGGACCAGCAAAACTaGATATTTTCCCAATTCCAG +
Preference number: 2 (lower is better)
Translates to: RQQDLESESQVPKRKSQQEDQQN*IFSQFQ
Trigger: CTGGAATTGGGAAAATATGCAGTTTTGCTGGTCCTC...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531028.2
3UTR-3UTR CCA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATCACACAGCAAGTCAGTaGAAGAGTGGGAAAAGGACC +
Preference number: 2 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYHTASQ*KSGKRT
Trigger: GGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CCA 72 bp CCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: PRLDSGPVGTCR*WWERSEPGRWA
Trigger: TGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CAA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCACAAGTGACATCTTCTaGGCGCTCCTCGGCAGACAG +
Preference number: 3 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGTSDIF*ALLGRQ
Trigger: CTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTGT...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CCA 72 bp CTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTaGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LEAREGHSRDPK*VTAPVLTKSSP
Trigger: TGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CAA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGGAGAACACCAGGTATaGCTGATGGGGAAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQGEHQV*LMGKVR
Trigger: CCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCC...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR TCA 72 bp CAGTCATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTaGGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCT +
Preference number: 3 (lower is better)
Translates to: QSCRVPAPGPGS*GEVPAFKKEHS
Trigger: AGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CCA 72 bp CCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTaGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAA +
Preference number: 3 (lower is better)
Translates to: PKAEAGVGPRFT*GLKGVVYSFGK
Trigger: TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR-3UTR CAA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGGGCAAGAACGGAGCTaGGGGATGTGGCAGTTCGTG +
Preference number: 3 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGGQERS*GMWQFV
Trigger: CACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CAA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGCCCAGGCCCAGGTTCTaGAGGGGAAGTCCCGGCTTT +
Preference number: 3 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRPRPRF*RGSPGF
Trigger: AAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGG...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CAA 90 bp CTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACACAAGTGACATCTTCTaGGCGCTCCTCGGCAGACAG +
Preference number: 3 (lower is better)
Translates to: LILLVVHFLAPHMAQGQDTSDIF*ALLGRQ
Trigger: CTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTGT...GTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CAA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGGGCAAGAACGGAGCTaGGGGATGTGGCAGTTCGTG +
Preference number: 3 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRGQERS*GMWQFV
Trigger: CACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCC...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CCA 72 bp GAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTaGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAG +
Preference number: 3 (lower is better)
Translates to: ERTLLSSLSFIS*PLIWPRAKTQE
Trigger: CTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CCA 72 bp TTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTaGTGGATCCTGAGAAGAGGGAAGCCTAGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: LRIEQASCPLTL*WILRRGKPRSG
Trigger: CCCAGACCTAGGCTTCCCTCTTCTCAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR CCA 72 bp ACCTCCAGCCAGAACACTGATCCAGACAGCAGGATCTaGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCC +
Preference number: 3 (lower is better)
Translates to: TSSQNTDPDSRI*SRKVRFPKGNP
Trigger: GGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCTGGATCAGTGTTCTGGCTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR-3UTR CAA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGAACTGCACTTTTTCATTaGCTACACCTGGTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRTALFH*LHLVWK
Trigger: CTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAGT...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR TCA 72 bp TTAGCAGTGGTGACAGTTGAGGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACTCCTCCACGAGAATGG +
Preference number: 3 (lower is better)
Translates to: LAVVTVEVGRTI*NLSKETPPREW
Trigger: CCATTCTCGTGGAGGAGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCACCTCAACTGTCACCACTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
3UTR-3UTR CAA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGTGGGGAGGACTATTaGAAATCTCAGCAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYGGEDY*KSQQGN
Trigger: GTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCACC...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGTGGGTCGCTTCCACCTaGCGGCGGGCCCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGWVAST*RRAPAC
Trigger: GCACGCCGGGGCCCGCCGTCAGGTGGAAGCGACCCA...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGGACAGAGGCGAGGCCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTGGGCAGGTTGCTGGGCTaGCGGCTATTTCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: EDRGEAQGRGRSRAPLHLGRLLG*RLFRSR
Trigger: CCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCC...CAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGGCCTCGCCTCTGTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGGACAGAGGCGAGGCCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTGCGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: EDRGEAQGRGRSRAPLHLRRWRV*RAWRLS
Trigger: GGACAACCTCCAGGCCCTGCATACCCTCCACCTCCG...CAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGGCCTCGCCTCTGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGSVQAP*SRASSH
Trigger: GTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCT...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQSVQAP*SRASSH
Trigger: GTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCT...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGGACAGAGGCGAGGCCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTGAGACGCTGCGTGAGTTaGTGTAGATGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EDRGEAQGRGRSRAPLHLRRCVS*CRWSWR
Trigger: CCGCCAGCTCCATCTACATCAACTCACGCAGCGTCT...CAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGGCCTCGCCTCTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGACCTCGGGCTGGTCGGTaGGCAGGAAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRPRAGR*AGRRCV
Trigger: CACGCAGCGTCTTCCTGCGCACCGACCAGCCCGAGG...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTAAGGCCAGTAGGCCGTaGCCCAGGCGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGKASRP*PRRTLR
Trigger: GCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTT...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGGACAGAGGCGAGGCCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTGAGGAACTCGCCAGTGTaGCCTGGCTCGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: EDRGEAQGRGRSRAPLHLRNSPV*PGSKVV
Trigger: CACAACCTTCGAGCCAGGCCACACTGGCGAGTTCCT...CAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGGCCTCGCCTCTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp GAGGACAGAGGCGAGGCCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTGACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: EDRGEAQGRGRSRAPLHLTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...CAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGGCCTCGCCTCTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCCAGGTCCCGGGCCCTaGGCGAGGAGGACGGACACC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRPGPGP*ARRTDT
Trigger: GGTGTCCGTCCTCCTCGCTCAGGGCCCGGGACCTGG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456580.6
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCGAGAACATGGTGGCTaGTGCCCCAGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGREHGG*CPREGR
Trigger: CCTCCCCTCCCTGGGGCAGCAGCCACCATGTTCTCG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCCCACCTGGCCCTGGTaGAGGTCGTGGGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGPTWPW*RSWELM
Trigger: CATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTCCCACCTGGCCCTGGTaGAGGTCGTGGGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGPTWPW*RSWELM
Trigger: CATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGG...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTGAGCTGGCGGCCTTGTaGTGCAGGCTGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGELAAL*CRLCMR
Trigger: CCGCATGCACAGCCTGCAGCACAAGGCCGCCAGCTC...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGAGCTGGCGGCCTTGTaGTGCAGGCTGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGELAAL*CRLCMR
Trigger: CCGCATGCACAGCCTGCAGCACAAGGCCGCCAGCTC...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCCTCGGGCTGGTCGGTaGGCAGGAAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMPRAGR*AGRRCV
Trigger: CACGCAGCGTCTTCCTGCGCACCGACCAGCCCGAGG...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGGCAGGTTGCTGGGCTaGCGGCTATTTCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGGRLLG*RLFRSR
Trigger: CCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATTGCCCACCTGGCCCTaGTGCAGGTCGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRLPTWP*CRSWEL
Trigger: CAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAA...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGAPAGV*GLIQAQ
Trigger: CTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGC...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGAPAGV*GLIQAQ
Trigger: CTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCTCCCGGGAGGCAAGTaGCGAGCAGGCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGLPGGK*RAGCHK
Trigger: TTTGTGGCAGCCTGCTCGTCACTTGCCTCCCGGGAG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTCTCCCGGGAGGCAAGTaGCGAGCAGGCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGLPGGK*RAGCHK
Trigger: TTTGTGGCAGCCTGCTCGTCACTTGCCTCCCGGGAG...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAACTCCCGGGAGGCAAGTaGCGAGCAGGCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQLPGGK*RAGCHK
Trigger: TTTGTGGCAGCCTGCTCGTCACTTGCCTCCCGGGAG...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCCCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCPCAHQ*RRMRGP
Trigger: AGGGCCACGCATACGCCGTCACTGATGTGCGCAAGG...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTAGGTGTCCTTGTGGTTaGTGCAGCCGCCACCGCGGT +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGRCPCG*CSRHRG
Trigger: ACCGCGGTGGCGGCTGCATCAACCACAAGGACACCT...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTCGGCGGGCCCCGGCGTaGCCTTATAGTAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGRRAPA*PYSRVS
Trigger: ACTCACTCTACTATAAGGGCACGCCGGGGCCCGCCG...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMCRGSS*SVQAPC
Trigger: GCATGGCGCCTGGACGCTGCATGAGGACCCGCGACA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCCTGGCGGCCTTGTGCTaGAGGCTGTGCATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCLAALC*RLCMRY
Trigger: GTACCGCATGCACAGCCTGCAGCACAAGGCCGCCAG...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGACTGGCGGCCTTGTGCTaGAGGCTGTGCATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRLAALC*RLCMRY
Trigger: GTACCGCATGCACAGCCTGCAGCACAAGGCCGCCAG...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGACCTCGGGCTGGTCGGTaGGCAGGAAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LLVVHFLAPHMAQGQDPGPRAGR*AGRRCV
Trigger: CACGCAGCGTCTTCCTGCGCACCGACCAGCCCGAGG...TCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGGACAGAGGCGAGGCCCAAGGCAGAGGCCGGAGTAGGGCCCCGCTTCACCTGGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: EDRGEAQGRGRSRAPLHLGSAFR*TWPRNS
Trigger: TGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCC...CAGGTGAAGCGGGGCCCTACTCCGGCCTCTGCCTTGGGCCTCGCCTCTGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGACGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRRRWRV*RAWRLS
Trigger: GGACAACCTCCAGGCCCTGCATACCCTCCACCTCCG...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGCAGGTTGCTGGGCTaGCGGCTATTTCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVGRLLG*RLFRSR
Trigger: CCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTTGCCCACCTGGCCCTaGTGCAGGTCGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMLPTWP*CRSWEL
Trigger: CAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCGTGACGGCGTATGCGTaGCCCTTTACCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCVTAYA*PFTRPH
Trigger: GTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCAC...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMAPAGV*GLIQAQ
Trigger: CTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGC...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVAPAGV*GLIQAQ
Trigger: CTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTTGGGTCGCTTCCACCTaGCGGCGGGCCCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPWVAST*RRAPAC
Trigger: GCACGCCGGGGCCCGCCGTCAGGTGGAAGCGACCCA...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCTGGGTCGCTTCCACCTaGCGGCGGGCCCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SADSRALGKCAQWIESLSWVAST*RRAPAC
Trigger: GCACGCCGGGGCCCGCCGTCAGGTGGAAGCGACCCA...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTCCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVPCAHQ*RRMRGP
Trigger: AGGGCCACGCATACGCCGTCACTGATGTGCGCAAGG...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGGCCTCTGAGAGGACCTaGGGACAGAGGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKASERT*GQRRGP
Trigger: TGGGCCTCGCCTCTGTCCTCAGGTCCTCTCAGAGGC...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCGGCGGGCCCCGGCGTaGCCTTATAGTAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVRRAPA*PYSRVS
Trigger: ACTCACTCTACTATAAGGGCACGCCGGGGCCCGCCG...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCCCACAAACCAGCAGTTaGCCACCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGPQTSS*PPGPGA
Trigger: TGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGG...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGTGCGTCTGCTGTGTTaGCTCCATCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGVRLLC*LHPGPG
Trigger: ACCAGGCCCTGGATGGAGGCAACACAGCAGACGCAC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQSVQAP*SRASSH
Trigger: GTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCT...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTTGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSCRGSS*SVQAPC
Trigger: GCATGGCGCCTGGACGCTGCATGAGGACCCGCGACA...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCATGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: LVVHFLAPHMAQGQDPGACRGSS*SVQAPC
Trigger: GCATGGCGCCTGGACGCTGCATGAGGACCCGCGACA...TGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCTGGCGGCCTTGTGCTaGAGGCTGTGCATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVLAALC*RLCMRY
Trigger: GTACCGCATGCACAGCCTGCAGCACAAGGCCGCCAG...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGGAGCTGGCGGCCTTGTaGTGCAGGCTGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKELAAL*CRLCMR
Trigger: CCGCATGCACAGCCTGCAGCACAAGGCCGCCAGCTC...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAGAGCTGGCGGCCTTGTaGTGCAGGCTGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: LVVHFLAPHMAQGQDPGAELAAL*CRLCMR
Trigger: CCGCATGCACAGCCTGCAGCACAAGGCCGCCAGCTC...TGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCACTCTGGTGTGGAGGTaGCCTTCTGCACAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCTLVWR*PSAQPS
Trigger: GCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGT...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVRRWRV*RAWRLS
Trigger: GGACAACCTCCAGGCCCTGCATACCCTCCACCTCCG...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCCAGTGCCTGGCAGGTTaGTGGGCTGCCGGCTATTTC +
Preference number: 4 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGQCLAG*WAAGYF
Trigger: GAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTG...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGTGCTGCTGAGAATGTaGACGGCCACAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGVLLRM*TATVPG
Trigger: GCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCAC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGCCTCGGTCAGGTCGATaGGCTCAGAAACACCACCCG +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGPRSGR*AQKHHP
Trigger: CGGGTGGTGTTTCTGAGCCCATCGACCTGACCGAGG...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCCTCGGTCAGGTCGATaGGCTCAGAAACACCACCCG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGPRSGR*AQKHHP
Trigger: CGGGTGGTGTTTCTGAGCCCATCGACCTGACCGAGG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCCCTCGGTCAGGTCGATaGGCTCAGAAACACCACCCG +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCPRSGR*AQKHHP
Trigger: CGGGTGGTGTTTCTGAGCCCATCGACCTGACCGAGG...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAGCGCGTAGACCGCTTTaGCCGCTGCTGGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRARRPL*PLLDAD
Trigger: ATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGC...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGCTGGGGTCTTACAGCAGAGAGGCTCTGGGAGCACATCTCCCCTTCTGGTCCCTTTCGGTCCCGGAGGTaGAGGGTATGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWGLTAERLWEHISPSGPFRSRR*RVCRAW
Trigger: CCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAA...GGGACCAGAAGGGGAGATGTGCTCCCAGAGCCTCTCTGCTGTAAGACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCGGGGAAAGTGAGGTCTaGGAGGCTGGGTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGGESEV*EAGLGL
Trigger: TAGGCCCAACCCAGCCTCCCAGACCTCACTTTCCCC...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTCCTGGCCCCTCATATaGCCCAGGGCCAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMSWPLI*PRAKTQ
Trigger: CTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGGCCGAGCCCAGTGGGTaGCCTGACTCTGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKAEPSG*PDSGEH
Trigger: GTGCTCACCAGAGTCAGGCCACCCACTGGGCTCGGC...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGAAGCCTAGGTCTGGGTaGTGTGGGCTGGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGKPRSG*CGLEAL
Trigger: TAGGGCCTCCAGCCCACACCACCCAGACCTAGGCTT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGCAGGTCGTGGGAGCTaGTGCCATCCACAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVAGRGS*CHPQRG
Trigger: GCCTCTTTGTGGATGGCATCAGCTCCCACGACCTGC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCACCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LVVHFLAPHMAQGQDPGAPCAHQ*RRMRGP
Trigger: AGGGCCACGCATACGCCGTCACTGATGTGCGCAAGG...TGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAAGGTGTCCTTGTGGTTaGTGCAGCCGCCACCGCGGT +
Preference number: 4 (lower is better)
Translates to: LLVVHFLAPHMAQGQDPGRCPCG*CSRHRG
Trigger: ACCGCGGTGGCGGCTGCATCAACCACAAGGACACCT...TCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGACGCTGCGTGAGTTaGTGTAGATGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCRRCVS*CRWSWR
Trigger: CCGCCAGCTCCATCTACATCAACTCACGCAGCGTCT...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGAGACGCTGCGTGAGTTaGTGTAGATGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGRRCVS*CRWSWR
Trigger: CCGCCAGCTCCATCTACATCAACTCACGCAGCGTCT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTCGGCGGGCCCCGGCGTaGCCTTATAGTAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSRRAPA*PYSRVS
Trigger: ACTCACTCTACTATAAGGGCACGCCGGGGCCCGCCG...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACCACAAACCAGCAGTTaGCCACCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PGPRPRFLRGSPGFQERTPQTSS*PPGPGA
Trigger: TGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGG...TGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAATCTGGGATGACCTTTTaGCACAGCGACTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQSGMTF*HSDSRE
Trigger: CTCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGA...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAAGTGGAAGTGGAAGATaGCCGCGTAGGCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRSGSGR*PRRRWA
Trigger: AGCCCAACGCCTACGCGGGCATCTTCCACTTCCACT...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGAGTGGAAGTGGAAGATaGCCGCGTAGGCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGSGSGR*PRRRWA
Trigger: AGCCCAACGCCTACGCGGGCATCTTCCACTTCCACT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTAGTGGAAGTGGAAGATaGCCGCGTAGGCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGSGSGR*PRRRWA
Trigger: AGCCCAACGCCTACGCGGGCATCTTCCACTTCCACT...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGTCCACCAGTGCGTCTaGTGTGTTGCCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGVHQCV*CVASIQ
Trigger: CTGGATGGAGGCAACACAGCAGACGCACTGGTGGAC...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGTCCACCAGTGCGTCTaGTGTGTTGCCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQVHQCV*CVASIQ
Trigger: CTGGATGGAGGCAACACAGCAGACGCACTGGTGGAC...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTGCTGCAGGCTGTGCATaGGGTACTGGCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVAAGCA*GTGGSP
Trigger: AGGAGAACCGCCAGTACCGCATGCACAGCCTGCAGC...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTTTGTGCTGCAGGCTGTaGATGCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGLCCRL*MRYWRF
Trigger: GAACCGCCAGTACCGCATGCACAGCCTGCAGCACAA...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATTGTGCTGCAGGCTGTaGATGCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRLCCRL*MRYWRF
Trigger: GAACCGCCAGTACCGCATGCACAGCCTGCAGCACAA...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTCAGTGCCTGGCAGGTTaGTGGGCTGCCGGCTATTTC +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVQCLAG*WAAGYF
Trigger: GAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTG...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATCCACGAGAATGGAATaGTTCGGGGCCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRSTRME*FGALGT
Trigger: TGTCCCGAGGGCCCCGAAGCATTCCATTCTCGTGGA...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGGGCTCCCTATCTCCTaGCGAGCCCAGTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQGLPIS*RAQWVA
Trigger: GGCCACCCACTGGGCTCGGCAGGAGATAGGGAGCCC...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGTCACACACGAGAACATaGTGGCTGCTGCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGSHTRT*WLLPQG
Trigger: TCCCTGGGGCAGCAGCCACCATGTTCTCGTGTGTGA...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCCCTGGTGCAGGTCGTaGGAGCTGATGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVPWCRS*ELMPST
Trigger: TGTGGATGGCATCAGCTCCCACGACCTGCACCAGGG...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGTGCCCGCGTAGGCGTTaGGCTTTTCGGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVCPRRR*AFRGPI
Trigger: AATGGGACCCCGAAAAGCCCAACGCCTACGCGGGCA...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTGCCCGCGTAGGCGTTaGGCTTTTCGGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMCPRRR*AFRGPI
Trigger: AATGGGACCCCGAAAAGCCCAACGCCTACGCGGGCA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACCGAAGCGCCAGAAGTaGAAGTGGAAGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PGPRPRFLRGSPGFQERTPKRQK*KWKMPA
Trigger: CGCGGGCATCTTCCACTTCCACTTCTGGCGCTTCGG...TGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTCTCGCCAGTGTGGCCTaGCTCGAAGGTTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVLASVA*LEGCGD
Trigger: ATCCCCACAACCTTCGAGCCAGGCCACACTGGCGAG...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGAGAGTTAGCCCCTGTTaGGGAGTCCTTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGRVSPC*GVLEAS
Trigger: GCTGGCCTCAAGGACTCCCCAACAGGGGCTAACTCT...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAAGGGTATGCAGGGCCTaGAGGTTGTCCGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLVVHFLAPHMAQGQDPGRVCRA*RLSGSA
Trigger: GGCTGACCCGGACAACCTCCAGGCCCTGCATACCCT...TCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTGCCTGGCAGGTTGCTaGGCTGCCGGCTATTTCGGT +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMCLAGC*AAGYFG
Trigger: ACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGVGTCR*WWERSE
Trigger: CTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGGAGGACGGACACCCTaGGCTCCCAGGCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVGGRTP*APRPGD
Trigger: GTCCCCAGGCCTGGGAGCTCAGGGTGTCCGTCCTCC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456580.6
CDS-3UTR TCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAACCTTCCAGTCTGGGATaGCCTTTTGCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQPSSLG*PFATAT
Trigger: AGTCGCTGTGGCAAAAGGTCATCCCAGACTGGAAGG...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCAGAAACACCACCCGTaGAGTCCACCAGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVQKHHP*SPPVRL
Trigger: CAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTG...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAGGTGTCCTTGTGGTTaGTGCAGCCGCCACCGCGGT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRRCPCG*CSRHRG
Trigger: ACCGCGGTGGCGGCTGCATCAACCACAAGGACACCT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp AGATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAAGGTGTCCTTGTGGTTaGTGCAGCCGCCACCGCGGT +
Preference number: 4 (lower is better)
Translates to: RSQVGHGTSAHEEFSRGPRCPCG*CSRHRG
Trigger: ACCGCGGTGGCGGCTGCATCAACCACAAGGACACCT...TGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCCAGGCCCAGGTTCTTaGGGGGAAGTCCCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRPGPGS*GEVPAF
Trigger: GAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGATTCTCCATTCTCCGTaGATCTCCCCAGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGILHSP*ISPARP
Trigger: AGGCCTGGCTGGGGAGATGCACGGAGAATGGAGAAT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456580.6
CDS-3UTR GCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACCCCACCTGGCCCTGGTaGAGGTCGTGGGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDPTWPW*RSWELM
Trigger: CATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGG...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAGGCCTGGTAACAGCCTaGCAGTTTGGCATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRGLVTA*QFGIGL
Trigger: AAGGCCTATGCCAAACTGGCAGGCTGTTACCAGGCC...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGTGCGTCTGCTGTGTTaGCTCCATCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGVRLLC*LHPGPG
Trigger: ACCAGGCCCTGGATGGAGGCAACACAGCAGACGCAC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGTCCACCAGTGCGTCTaGTGTGTTGCCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVVHQCV*CVASIQ
Trigger: CTGGATGGAGGCAACACAGCAGACGCACTGGTGGAC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLVVHFLAPHMAQGQDPGRPPRL*TFNMRS
Trigger: TGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCT...TCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGGCCTCCATGTCAGCTaGTGTCACTGCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGGLHVS*CHCLDG
Trigger: TCCATCAAGGCAGTGACAGCAGCTGACATGGAGGCC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCTGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSCRGSS*SVQAPC
Trigger: GCATGGCGCCTGGACGCTGCATGAGGACCCGCGACA...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTTTGTGCTGCAGGCTGTaGATGCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVLCCRL*MRYWRF
Trigger: GAACCGCCAGTACCGCATGCACAGCCTGCAGCACAA...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACGAGCTGGCGGCCTTGTaGTGCAGGCTGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDELAAL*CRLCMR
Trigger: CCGCATGCACAGCCTGCAGCACAAGGCCGCCAGCTC...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCCCTCGGGCTGGTCGGTaGGCAGGAAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRPRAGR*AGRRCV
Trigger: CACGCAGCGTCTTCCTGCGCACCGACCAGCCCGAGG...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCACTCTGGTGTGGAGGTaGCCTTCTGCACAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSTLVWR*PSAQPS
Trigger: GCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGT...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRRRWRV*RAWRLS
Trigger: GGACAACCTCCAGGCCCTGCATACCCTCCACCTCCG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGTGCTGCTGAGAATGTaGACGGCCACAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGVLLRM*TATVPG
Trigger: GCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCAC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTGGGTCACGGCACCAGTaGTCACGAAGAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVGSRHQ*SRRVLQ
Trigger: CTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCC...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGAAGGCCAGTAGGCCGTaGCCCAGGCGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGKASRP*PRRTLR
Trigger: GCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTT...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGTCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGSSHVL*MLRWDV
Trigger: CACATCCCACCTGAGCATCCACAAGACGTGGGAGGA...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAAGAAGGTGTCCTTGTaGTTGATGCAGCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCKKVSL*LMQPPP
Trigger: CGGTGGCGGCTGCATCAACCACAAGGACACCTTCTT...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCTGTGCATGCGGTACTaGCGGTTCTCCTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMLCMRY*RFSSTL
Trigger: CAAGGTGGAGGAGAACCGCCAGTACCGCATGCACAG...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGTTTCGGTCCCGGAGGTaGAGGGTATGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRFRSRR*RVCRAW
Trigger: CCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAA...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGTTTCGGTCCCGGAGGTaGAGGGTATGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRFRSRR*RVCRAW
Trigger: CCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAA...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTGCCTGGCAGGTTGCTaGGCTGCCGGCTATTTCGGT +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGCLAGC*AAGYFG
Trigger: ACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCA...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVVGTCR*WWERSE
Trigger: CTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCAAGTGACATCTTCTTaGCGCTCCTCGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGQVTSS*RSSADS
Trigger: GCTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGGCAAGAACGGAGCTTaGGGATGTGGCAGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGGKNGA*GCGSSC
Trigger: ACACGAACTGCCACATCCCCAAGCTCCGTTCTTGCC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCGGGCCCCGCTTCACCTaGGGCCTCAAAGGTGTCGTT +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLGPRFT*GLKGVV
Trigger: AACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCC...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp AGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTAGCAGCCTCGGGCTCTaGCCGGAGATCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SGSRHQCSRRVLQRTSKTSSLGL*PEIQLG
Trigger: TCCCAGCTGGATCTCCGGCCAGAGCCCGAGGCTGCT...AGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGCCCTTATAGTAGAGTaGGTCGTCAGTGGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVALIVE*VVSGGE
Trigger: TTCCCCGCCACTGACGACTCACTCTACTATAAGGGC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCTCCCGGGAGGCAAGTaGCGAGCAGGCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQLPGGK*RAGCHK
Trigger: TTTGTGGCAGCCTGCTCGTCACTTGCCTCCCGGGAG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQPCAHQ*RRMRGP
Trigger: AGGGCCACGCATACGCCGTCACTGATGTGCGCAAGG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCCCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGPTSLT*RRPVGR
Trigger: ACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGG...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCAGACGCTGCGTGAGTTaGTGTAGATGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGRRCVS*CRWSWR
Trigger: CCGCCAGCTCCATCTACATCAACTCACGCAGCGTCT...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVWRAHQ*RLGAGT
Trigger: AGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCA...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTTCCAGACCTGTACAGTaGTGGGCTGGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVSRPVQ*WAGSAS
Trigger: AGAAGCTGAGCCAGCCCATCACTGTACAGGTCTGGA...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGTCCAGACCTGTACAGTaGTGGGCTGGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVSRPVQ*WAGSAS
Trigger: AGAAGCTGAGCCAGCCCATCACTGTACAGGTCTGGA...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAAGCAGTGGTGACAGTTaGGGTGGGGAGGACTATTTG +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQSSGDS*GGEDYL
Trigger: CAAATAGTCCTCCCCACCTCAACTGTCACCACTGCT...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACGAGAACATGGTGGCTaGTGCCCCAGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRREHGG*CPREGR
Trigger: CCTCCCCTCCCTGGGGCAGCAGCCACCATGTTCTCG...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCACGGCGGGCCCCGGCGTaGCCTTATAGTAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPRRAPA*PYSRVS
Trigger: ACTCACTCTACTATAAGGGCACGCCGGGGCCCGCCG...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTAGTGGAAGTGGAAGATaGCCGCGTAGGCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSSGSGR*PRRRWA
Trigger: AGCCCAACGCCTACGCGGGCATCTTCCACTTCCACT...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCGCACCAAAACTCATTaGGGGAGTTGGAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGRTKTH*GSWSGS
Trigger: ACTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCCGCACCAAAACTCATTaGGGGAGTTGGAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCRTKTH*GSWSGS
Trigger: ACTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCG...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGREVHQ*VCCVAS
Trigger: GGAGGCAACACAGCAGACGCACTGGTGGACTTCACG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCCGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSREVHQ*VCCVAS
Trigger: GGAGGCAACACAGCAGACGCACTGGTGGACTTCACG...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRRPPRL*TFNMRS
Trigger: TGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GGGCAGGAAGCAAGGGTAGCACTGTGGAACCTGTTTTTGTCAGGGGGTGGCAGGATCAGTGACGGCGTATaGGTGGCCCTTTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GQEARVALWNLFLSGGGRISDGV*VALYQA
Trigger: GGCCTGGTAAAGGGCCACGCATACGCCGTCACTGAT...CCTGCCACCCCCTGACAAAAACAGGTTCCACAGTGCTACCCTTGCTTCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp GGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTGCATATTTTCAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GTSAHEEFSRGPAKLHIFSVQAP*SRASSH
Trigger: GTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCT...GAAAATATGCAGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYSVQAP*SRASSH
Trigger: GTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGGCTGCAGGCTGTGCATaGGGTACTGGCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRAAGCA*GTGGSP
Trigger: AGGAGAACCGCCAGTACCGCATGCACAGCCTGCAGC...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCTGGCGGCCTTGTGCTaGAGGCTGTGCATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQLAALC*RLCMRY
Trigger: GTACCGCATGCACAGCCTGCAGCACAAGGCCGCCAG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGGTGGAGGTGCCCTTCTaGACAGCCGAGCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRVEVPF*TAERTL
Trigger: CAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCAC...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCGSAFR*TWPRNS
Trigger: TGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCC...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRGSAFR*TWPRNS
Trigger: TGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCC...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCGGCAGGTTGCTGGGCTaGCGGCTATTTCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRGRLLG*RLFRSR
Trigger: CCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCC...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGTGCTGCTGAGAATGTaGACGGCCACAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSQVGHGTSAHEEFSRGPVLLRM*TATVPG
Trigger: GCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCAC...TGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGGGTCACGGCACCAGTaGTCACGAAGAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGGSRHQ*SRRVLQ
Trigger: CTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGCCAAAGGCCCCCAGCTaGCTGGCCCCTGGCCCACTA +
Preference number: 4 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVPKAPS*LAPGPL
Trigger: TAGTGGGCCAGGGGCCAGGCAGCTGGGGGCCTTTGG...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCACCCCTGATCCTTACCTaGCTGGCCCCCAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPPLILT*LAPKVS
Trigger: GGAGACCTTGGGGGCCAGGCAGGTAAGGATCAGGGG...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCCTGCTCCTTCCAGTCTaGGATGACCTTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGLLLPV*DDLLPQ
Trigger: CTGTGGCAAAAGGTCATCCCAGACTGGAAGGAGCAG...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCGAAGCGCCAGAAGTaGAAGTGGAAGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRPKRQK*KWKMPA
Trigger: CGCGGGCATCTTCCACTTCCACTTCTGGCGCTTCGG...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGGTGACGGCGTATGCGTaGCCCTTTACCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKVTAYA*PFTRPH
Trigger: GTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCAC...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTAAGGCCAGTAGGCCGTaGCCCAGGCGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPKASRP*PRRTLR
Trigger: GCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTT...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAAAGGCCAGTAGGCCGTaGCCCAGGCGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQKASRP*PRRTLR
Trigger: GCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTT...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTCTGTGCATGCGGTACTaGCGGTTCTCCTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSLCMRY*RFSSTL
Trigger: CAAGGTGGAGGAGAACCGCCAGTACCGCATGCACAG...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTCGCCAGTGTGGCCTaGCTCGAAGGTTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRLASVA*LEGCGD
Trigger: ATCCCCACAACCTTCGAGCCAGGCCACACTGGCGAG...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTCGCCAGTGTGGCCTaGCTCGAAGGTTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRLASVA*LEGCGD
Trigger: ATCCCCACAACCTTCGAGCCAGGCCACACTGGCGAG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKAPAGV*GLIQAQ
Trigger: CTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGC...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGAGGGTATGCAGGGCCTaGAGGTTGTCCGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQRVCRA*RLSGSA
Trigger: GGCTGACCCGGACAACCTCCAGGCCCTGCATACCCT...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCAGGGTATGCAGGGCCTaGAGGTTGTCCGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSRVCRA*RLSGSA
Trigger: GGCTGACCCGGACAACCTCCAGGCCCTGCATACCCT...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTAGGGTATGCAGGGCCTaGAGGTTGTCCGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGSRHQCSRRVLQRTSKTRVCRA*RLSGSA
Trigger: GGCTGACCCGGACAACCTCCAGGCCCTGCATACCCT...AGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGTGCCTGGCAGGTTGCTaGGCTGCCGGCTATTTCGGT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRCLAGC*AAGYFG
Trigger: ACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCA...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LVVHFLAPHMAQGQDPGAVGTCR*WWERSE
Trigger: CTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC...TGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGGCCCCGCTTCACCTaGGGCCTCAAAGGTGTCGTT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPGPRFT*GLKGVV
Trigger: AACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATTGTCGTTCATTTCCTaGCCCCTCATATGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRLSFIS*PLIWPR
Trigger: CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAA...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCGCAGGTCGTGGGAGCTaGTGCCATCCACAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSAGRGS*CHPQRG
Trigger: GCCTCTTTGTGGATGGCATCAGCTCCCACGACCTGC...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCCAGAAACACCACCCGTaGAGTCCACCAGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLQKHHP*SPPVRL
Trigger: CAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTG...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAACCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKPCAHQ*RRMRGP
Trigger: AGGGCCACGCATACGCCGTCACTGATGTGCGCAAGG...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVPTSLT*RRPVGR
Trigger: ACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGG...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAAGGTGTCCTTGTGGTTaGTGCAGCCGCCACCGCGGT +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKRCPCG*CSRHRG
Trigger: ACCGCGGTGGCGGCTGCATCAACCACAAGGACACCT...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR TCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTCAGGAAGACGCTGCGTaGGTTGATGTAGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVQEDAA*VDVDGA
Trigger: AGCTCCATCTACATCAACTCACGCAGCGTCTTCCTG...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCTCCAGACCTGTACAGTaGTGGGCTGGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSSRPVQ*WAGSAS
Trigger: AGAAGCTGAGCCAGCCCATCACTGTACAGGTCTGGA...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTCCAGACCTGTACAGTaGTGGGCTGGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGSRPVQ*WAGSAS
Trigger: AGAAGCTGAGCCAGCCCATCACTGTACAGGTCTGGA...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTAGCAGTGGTGACAGTTaGGGTGGGGAGGACTATTTG +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVSSGDS*GGEDYL
Trigger: CAAATAGTCCTCCCCACCTCAACTGTCACCACTGCT...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCCCAGGCCCAGGTTCTTaGGGGGAAGTCCCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRPGPGS*GEVPAF
Trigger: GAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGG...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTCGAGAACATGGTGGCTaGTGCCCCAGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPREHGG*CPREGR
Trigger: CCTCCCCTCCCTGGGGCAGCAGCCACCATGTTCTCG...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CAGAGGACCAGCAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGCGAGAACATGGTGGCTaGTGCCCCAGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRTSKTAYFPNSSLSRNPREHGG*CPREGR
Trigger: CCTCCCCTCCCTGGGGCAGCAGCCACCATGTTCTCG...CGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTGCTGGTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR GCA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGCGAAGAGCACCTTCCTaGGCCGGCAGTCCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVRRAPS*AGSPAS
Trigger: TGAGGCGGGACTGCCGGCGCAGGAAGGTGCTCTTCG...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACCCACCTGGCCCTGGTaGAGGTCGTGGGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQPTWPW*RSWELM
Trigger: CATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR GCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCACCACAAACCAGCAGTTaGCCACCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPPQTSS*PPGPGA
Trigger: TGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGG...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGTCTGGGATGACCTTTTaGCACAGCGACTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRSGMTF*HSDSRE
Trigger: CTCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGA...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQRPPRL*TFNMRS
Trigger: TGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCT...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LILLVVHFLAPHMAQGQDRPPRL*TFNMRS
Trigger: TGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCT...GTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGGCCTCCATGTCAGCTaGTGTCACTGCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGGLHVS*CHCLDG
Trigger: TCCATCAAGGCAGTGACAGCAGCTGACATGGAGGCC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAGGCCTCCATGTCAGCTaGTGTCACTGCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LVVHFLAPHMAQGQDPGAGLHVS*CHCLDG
Trigger: TCCATCAAGGCAGTGACAGCAGCTGACATGGAGGCC...TGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGATCAGTGACGGCGTATaGGTGGCCCTTTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRISDGV*VALYQA
Trigger: GGCCTGGTAAAGGGCCACGCATACGCCGTCACTGAT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGATCAGTGACGGCGTATaGGTGGCCCTTTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRISDGV*VALYQA
Trigger: GGCCTGGTAAAGGGCCACGCATACGCCGTCACTGAT...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTCTCTTGCTCACTTTCTaGCACTCCTCCGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVLLLTF*HSSEVS
Trigger: TGACACCTCGGAGGAGTGGCAGAAAGTGAGCAAGAG...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCAACTCACCGTCGTCCTaGACGGTCACACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGNSPSS*TVTPIF
Trigger: GAAGATGGGTGTGACCGTGCAGGACGACGGTGAGTT...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAACTCACCGTCGTCCTaGACGGTCACACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSNSPSS*TVTPIF
Trigger: GAAGATGGGTGTGACCGTGCAGGACGACGGTGAGTT...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCTGCAGGCTGTGCATaGGGTACTGGCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPAAGCA*GTGGSP
Trigger: AGGAGAACCGCCAGTACCGCATGCACAGCCTGCAGC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAGCTGCAGGCTGTGCATaGGGTACTGGCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPAAGCA*GTGGSP
Trigger: AGGAGAACCGCCAGTACCGCATGCACAGCCTGCAGC...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTCGGGCTGGTCGGTaGGCAGGAAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYPRAGR*AGRRCV
Trigger: CACGCAGCGTCTTCCTGCGCACCGACCAGCCCGAGG...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAACTCTGGTGTGGAGGTaGCCTTCTGCACAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQTLVWR*PSAQPS
Trigger: GCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGT...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCAGGTTGCTGGGCTaGCGGCTATTTCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPGRLLG*RLFRSR
Trigger: CCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCC...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTGCCTGGCAGGTTaGTGGGCTGCCGGCTATTTC +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSQCLAG*WAAGYF
Trigger: GAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTG...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACAGTGCCTGGCAGGTTaGTGGGCTGCCGGCTATTTC +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQQCLAG*WAAGYF
Trigger: GAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGGTGCTGCTGAGAATGTaGACGGCCACAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKVLLRM*TATVPG
Trigger: GCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCAC...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGTGCTGCTGAGAATGTaGACGGCCACAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQVLLRM*TATVPG
Trigger: GCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCAC...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACCCCTGGTGCAGGTCGTaGGAGCTGATGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDPWCRS*ELMPST
Trigger: TGTGGATGGCATCAGCTCCCACGACCTGCACCAGGG...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp ACAAATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGTTGCCCACCTGGCCCTaGTGCAGGTCGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TNVTCIFSQFQPEQEPGRLPTWP*CRSWEL
Trigger: CAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAA...CCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCTTGCCCACCTGGCCCTaGTGCAGGTCGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILLPTWP*CRSWEL
Trigger: CAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAA...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCTGCCCGCGTAGGCGTTaGGCTTTTCGGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSCPRRR*AFRGPI
Trigger: AATGGGACCCCGAAAAGCCCAACGCCTACGCGGGCA...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGCCGAAGCGCCAGAAGTaGAAGTGGAAGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKPKRQK*KWKMPA
Trigger: CGCGGGCATCTTCCACTTCCACTTCTGGCGCTTCGG...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCCGAAGCGCCAGAAGTaGAAGTGGAAGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQPKRQK*KWKMPA
Trigger: CGCGGGCATCTTCCACTTCCACTTCTGGCGCTTCGG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAACAGCCTGCCAGTTTaGCATAGGCCTTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCNSLPV*HRPSPL
Trigger: TAGTGGAGAAGGCCTATGCCAAACTGGCAGGCTGTT...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCTCGGTCAGGTCGATaGGCTCAGAAACACCACCCG +
Preference number: 4 (lower is better)
Translates to: LILLVVHFLAPHMAQGQDPRSGR*AQKHHP
Trigger: CGGGTGGTGTTTCTGAGCCCATCGACCTGACCGAGG...GTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVLWMLR*DVLITR
Trigger: CCGCGTGATCAACACATCCCACCTGAGCATCCACAA...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTAAGAAGGTGTCCTTGTaGTTGATGCAGCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSKKVSL*LMQPPP
Trigger: CGGTGGCGGCTGCATCAACCACAAGGACACCTTCTT...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTCGCTTTGGCCGCTGCTaGATGCAGATCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSRFGRC*MQIRTS
Trigger: TGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCG...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCGCTTTGGCCGCTGCTaGATGCAGATCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGRFGRC*MQIRTS
Trigger: TGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCGCGCGTAGACCGCTTTaGCCGCTGCTGGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSARRPL*PLLDAD
Trigger: ATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGC...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCGCGTAGACCGCTTTaGCCGCTGCTGGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPARRPL*PLLDAD
Trigger: ATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTGTGCATGCGGTACTaGCGGTTCTCCTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRLCMRY*RFSSTL
Trigger: CAAGGTGGAGGAGAACCGCCAGTACCGCATGCACAG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTCCTTCAGCACTCGGTaGTTCCAGACCTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMSFSTR*FQTCTV
Trigger: CACTGTACAGGTCTGGAACCACCGAGTGCTGAAGGA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCCTTTAGGTGCACCTaGCCCAGAAATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGAFRCT*PRNSSF
Trigger: GAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGC...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCAGGGTATGCAGGGCCTaGAGGTTGTCCGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRRVCRA*RLSGSA
Trigger: GGCTGACCCGGACAACCTCCAGGCCCTGCATACCCT...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGTTTCGGTCCCGGAGGTaGAGGGTATGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGFRSRR*RVCRAW
Trigger: CCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAA...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLVGTCR*WWERSE
Trigger: CTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGCACACAGCAAGTCAGTaGAAGAGTGGGAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGHTASQ*KSGKRT
Trigger: GGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCCAAGTGACATCTTCTTaGCGCTCCTCGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSQVTSS*RSSADS
Trigger: GCTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTG...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGTTGCTACACCTGGTCTaGAAGCCCGAGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKLLHLV*KPEKGT
Trigger: TGTGCCCTTCTCGGGCTTCCAGACCAGGTGTAGCAA...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGCTGGGTGGTGTGGGCTaGAGGCCCTACCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRLGGVG*RPYPPA
Trigger: TGCAGGTGGGTAGGGCCTCCAGCCCACACCACCCAG...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCGTCCCGCCTCAGGGCTaGGTAGTTCTGGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSVPPQG*VVLVLI
Trigger: TATGAGGACCAGAACTACTCAGCCCTGAGGCGGGAC...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAGTCCCGCCTCAGGGCTaGGTAGTTCTGGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPVPPQG*VVLVLI
Trigger: TATGAGGACCAGAACTACTCAGCCCTGAGGCGGGAC...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATTGGGTCGCTTCCACCTaGCGGCGGGCCCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYWVAST*RRAPAC
Trigger: GCACGCCGGGGCCCGCCGTCAGGTGGAAGCGACCCA...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGCAGAAACACCACCCGTaGAGTCCACCAGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKQKHHP*SPPVRL
Trigger: CAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTG...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAAGACGCTGCGTGAGTTaGTGTAGATGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPRRCVS*CRWSWR
Trigger: CCGCCAGCTCCATCTACATCAACTCACGCAGCGTCT...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRWRAHQ*RLGAGT
Trigger: AGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCA...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTTCGTGTGTAAACAAGTaGCATCTTCTTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGSCVNK*HLLGAP
Trigger: AGGAGCGCCAAGAAGATGTCACTTGTTTACACACGA...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTCCAGCCAGAACACTaGTCCAGACAGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRLQPEH*SRQQDL
Trigger: CAGATCCTGCTGTCTGGATCAGTGTTCTGGCTGGAG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTCTGGGATGACCTTTTaGCACAGCGACTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQSGMTF*HSDSRE
Trigger: CTCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGA...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACTCGGGGTCCCATTCCTaGTCCTTCCAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: LILLVVHFLAPHMAQGQDSGSHS*SFQSGM
Trigger: CATCCCAGACTGGAAGGAGCAGGAATGGGACCCCGA...GTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTCGCACCAAAACTCATTaGGGGAGTTGGAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSRTKTH*GSWSGS
Trigger: ACTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCG...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGTGCGTCTGCTGTGTTaGCTCCATCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGVRLLC*LHPGPG
Trigger: ACCAGGCCCTGGATGGAGGCAACACAGCAGACGCAC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQREVHQ*VCCVAS
Trigger: GGAGGCAACACAGCAGACGCACTGGTGGACTTCACG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAACTCACCGTCGTCCTaGACGGTCACACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLNSPSS*TVTPIF
Trigger: GAAGATGGGTGTGACCGTGCAGGACGACGGTGAGTT...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGTTGGCCGCTGCTGGATaGAGATCAGGACTTCATCTT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVLAAAG*RSGLHL
Trigger: AAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAA...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACT +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDDRFGR*WMQIRT
Trigger: AGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTC...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACT +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQDRFGR*WMQIRT
Trigger: AGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTC...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCTTGTGCTGCAGGCTGTaGATGCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSLCCRL*MRYWRF
Trigger: GAACCGCCAGTACCGCATGCACAGCCTGCAGCACAA...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCCTGGCGGCCTTGTGCTaGAGGCTGTGCATGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVLAALC*RLCMRY
Trigger: GTACCGCATGCACAGCCTGCAGCACAAGGCCGCCAG...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCGTGGAGGTGCCCTTCTaGACAGCCGAGCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRVEVPF*TAERTL
Trigger: CAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCAC...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGACTCTGGTGTGGAGGTaGCCTTCTGCACAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGTLVWR*PSAQPS
Trigger: GCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGT...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: LLVVHFLAPHMAQGQDPGGSAFR*TWPRNS
Trigger: TGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCC...TCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCCACGAGAATGGAATaGTTCGGGGCCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDSTRME*FGALGT
Trigger: TGTCCCGAGGGCCCCGAAGCATTCCATTCTCGTGGA...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCACACACGAGAACATaGTGGCTGCTGCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDSHTRT*WLLPQG
Trigger: TCCCTGGGGCAGCAGCCACCATGTTCTCGTGTGTGA...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTTAGCCTGAGGTGCAAGCTGGCTCACTTCACCCCCTACTCAGGAGCCTTGATTTCACACACGAGAACATaGTGGCTGCTGCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSLRCKLAHFTPYSGALISHTRT*WLLPQG
Trigger: TCCCTGGGGCAGCAGCCACCATGTTCTCGTGTGTGA...AATCAAGGCTCCTGAGTAGGGGGTGAAGTGAGCCAGCTTGCACCTCAGGCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTCTGCTCCTTCCAGTCTaGGATGACCTTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSLLLPV*DDLLPQ
Trigger: CTGTGGCAAAAGGTCATCCCAGACTGGAAGGAGCAG...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCTGCTCCTTCCAGTCTaGGATGACCTTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGLLLPV*DDLLPQ
Trigger: CTGTGGCAAAAGGTCATCCCAGACTGGAAGGAGCAG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGTGCCCGCGTAGGCGTTaGGCTTTTCGGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGCPRRR*AFRGPI
Trigger: AATGGGACCCCGAAAAGCCCAACGCCTACGCGGGCA...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGAACAGCCTGCCAGTTTaGCATAGGCCTTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMNSLPV*HRPSPL
Trigger: TAGTGGAGAAGGCCTATGCCAAACTGGCAGGCTGTT...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGGTGACGGCGTATGCGTaGCCCTTTACCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVVTAYA*PFTRPH
Trigger: GTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCAC...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGTGACGGCGTATGCGTaGCCCTTTACCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPVTAYA*PFTRPH
Trigger: GTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCAC...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GATTTATTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTGGTGGATCCTGAAGGCCAGTAGGCCGTaGCCCAGGCGCACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: DLLRIEQASCPLTLWWILKASRP*PRRTLR
Trigger: GCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTT...CAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAATAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGAAGAAGGTGTCCTTGTaGTTGATGCAGCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRKKVSL*LMQPPP
Trigger: CGGTGGCGGCTGCATCAACCACAAGGACACCTTCTT...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGATGTACTGTGGGTTCTaGAAGAAGGTGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGMYCGF*KKVSLW
Trigger: CCACAAGGACACCTTCTTCCAGAACCCACAGTACAT...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCCGCTTTGGCCGCTGCTaGATGCAGATCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLRFGRC*MQIRTS
Trigger: TGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCG...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGAGCGCGTAGACCGCTTTaGCCGCTGCTGGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRARRPL*PLLDAD
Trigger: ATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGC...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACTGTGCATGCGGTACTaGCGGTTCTCCTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQLCMRY*RFSSTL
Trigger: CAAGGTGGAGGAGAACCGCCAGTACCGCATGCACAG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCTGTGCATGCGGTACTaGCGGTTCTCCTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSLCMRY*RFSSTL
Trigger: CAAGGTGGAGGAGAACCGCCAGTACCGCATGCACAG...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCCTCGCCAGTGTGGCCTaGCTCGAAGGTTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRLASVA*LEGCGD
Trigger: ATCCCCACAACCTTCGAGCCAGGCCACACTGGCGAG...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCAGGAACTCGCCAGTGTaGCCTGGCTCGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSRNSPV*PGSKVV
Trigger: CACAACCTTCGAGCCAGGCCACACTGGCGAGTTCCT...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAAGAGTTAGCCCCTGTTaGGGAGTCCTTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPRVSPC*GVLEAS
Trigger: GCTGGCCTCAAGGACTCCCCAACAGGGGCTAACTCT...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ATGCAGAGTCCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAATTTCACATTGTACTCTaGTGTGGAGGTGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: MQSPGPRPRFLRGSPGFQFHIVL*CGGALL
Trigger: CAGAAGGGCACCTCCACACCAGAGTACAATGTGAAA...TTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGGACTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTTCCTTCAGCACTCGGTaGTTCCAGACCTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSSFSTR*FQTCTV
Trigger: CACTGTACAGGTCTGGAACCACCGAGTGCTGAAGGA...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGGACATTTCGGTCCCGGAGGTaGAGGGTATGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGSGVGKSGSQKEIPARTFRSRR*RVCRAW
Trigger: CCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAA...TGTCCTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTGGGGACATGCAGATaGTGGTGGGAACGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPVGTCR*WWERSE
Trigger: CTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACACACAGCAAGTCAGTaGAAGAGTGGGAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: PGPRPRFLRGSPGFQERTHTASQ*KSGKRT
Trigger: GGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG...TGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCAAGTGACATCTTCTTaGCGCTCCTCGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRQVTSS*RSSADS
Trigger: GCTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTCGGAGCTTGGGGATGTaGCAGTTCGTGTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: WVGPRTRGARTELGDVAVRSLGM*QFVCKQ
Trigger: TTGTTTACACACGAACTGCCACATCCCCAAGCTCCG...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAGGGGAAAGTGAGGTCTaGGAGGCTGGGTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKGESEV*EAGLGL
Trigger: TAGGCCCAACCCAGCCTCCCAGACCTCACTTTCCCC...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGGGGAAAGTGAGGTCTaGGAGGCTGGGTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGGESEV*EAGLGL
Trigger: TAGGCCCAACCCAGCCTCCCAGACCTCACTTTCCCC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAAGCAGCCTCGGGCTCTaGCCGGAGATCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RQQDLESESQVPKRKSQQSSLGL*PEIQLG
Trigger: TCCCAGCTGGATCTCCGGCCAGAGCCCGAGGCTGCT...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACAGCAGAGATCCCAAGTaGGTCACGGCACCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LILLVVHFLAPHMAQGQDSRDPK*VTAPVL
Trigger: GAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCT...GTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGAGCAGAGATCCCAAGTaGGTCACGGCACCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKSRDPK*VTAPVL
Trigger: GAGCACTGGTGCCGTGACCCACTTGGGATCTCTGCT...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp AGCTGGGGTCTTACAGCAGAGAGGCTCTGGGAGCACATCTCCCCTTCTGGTCCCTCTTCCAGGAAAAGCTaGGGTCTTACAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SWGLTAERLWEHISPSGPSSRKS*GLTAER
Trigger: CCTCTCTGCTGTAAGACCCCAGCTTTTCCTGGAAGA...GGGACCAGAAGGGGAGATGTGCTCCCAGAGCCTCTCTGCTGTAAGACCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCAGGTCGTGGGAGCTaGTGCCATCCACAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRAGRGS*CHPQRG
Trigger: GCCTCTTTGTGGATGGCATCAGCTCCCACGACCTGC...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCACCTTCCAGTCTGGGATaGCCTTTTGCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPPSSLG*PFATAT
Trigger: AGTCGCTGTGGCAAAAGGTCATCCCAGACTGGAAGG...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCCTTCCAGTCTGGGATaGCCTTTTGCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQPSSLG*PFATAT
Trigger: AGTCGCTGTGGCAAAAGGTCATCCCAGACTGGAAGG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAACAGAAACACCACCCGTaGAGTCCACCAGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKQKHHP*SPPVRL
Trigger: CAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTG...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR TCA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGACATCTTCTGGCTTCTTaGCTTCGAAGATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRHLLAS*LRRCTV
Trigger: CACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATG...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCAGGAAGACGCTGCGTaGGTTGATGTAGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRQEDAA*VDVDGA
Trigger: AGCTCCATCTACATCAACTCACGCAGCGTCTTCCTG...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCCAGGAAGACGCTGCGTaGGTTGATGTAGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLQEDAA*VDVDGA
Trigger: AGCTCCATCTACATCAACTCACGCAGCGTCTTCCTG...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAATCGGGGTCCCATTCCTaGTCCTTCCAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKSGSHS*SFQSGM
Trigger: CATCCCAGACTGGAAGGAGCAGGAATGGGACCCCGA...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCGCACCAAAACTCATTaGGGGAGTTGGAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRRTKTH*GSWSGS
Trigger: ACTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCCTGGTAACAGCCTaGCAGTTTGGCATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPGLVTA*QFGIGL
Trigger: AAGGCCTATGCCAAACTGGCAGGCTGTTACCAGGCC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAGGCCTGGTAACAGCCTaGCAGTTTGGCATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPGLVTA*QFGIGL
Trigger: AAGGCCTATGCCAAACTGGCAGGCTGTTACCAGGCC...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGTGCGTCTGCTGTGTTaGCTCCATCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPVRLLC*LHPGPG
Trigger: ACCAGGCCCTGGATGGAGGCAACACAGCAGACGCAC...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGCGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGREVHQ*VCCVAS
Trigger: GGAGGCAACACAGCAGACGCACTGGTGGACTTCACG...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPRPPRL*TFNMRS
Trigger: TGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCT...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCGGCCTCCATGTCAGCTaGTGTCACTGCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSGLHVS*CHCLDG
Trigger: TCCATCAAGGCAGTGACAGCAGCTGACATGGAGGCC...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTCTTGCTCACTTTCTaGCACTCCTCCGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRLLLTF*HSSEVS
Trigger: TGACACCTCGGAGGAGTGGCAGAAAGTGAGCAAGAG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCCTCTTGCTCACTTTCTaGCACTCCTCCGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLLLLTF*HSSEVS
Trigger: TGACACCTCGGAGGAGTGGCAGAAAGTGAGCAAGAG...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCTGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGCRGSS*SVQAPC
Trigger: GCATGGCGCCTGGACGCTGCATGAGGACCCGCGACA...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACT +
Preference number: 4 (lower is better)
Translates to: NVTCIFSQFQPEQEPGRSDRFGR*WMQIRT
Trigger: AGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTC...GCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCGCTGCAGGCTGTGCATaGGGTACTGGCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SADSRALGKCAQWIESLSAAGCA*GTGGSP
Trigger: AGGAGAACCGCCAGTACCGCATGCACAGCCTGCAGC...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGTGGAGGTGCCCTTCTaGACAGCCGAGCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVVEVPF*TAERTL
Trigger: CAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCAC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRGSAFR*TWPRNS
Trigger: TGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCC...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYRRWRV*RAWRLS
Trigger: GGACAACCTCCAGGCCCTGCATACCCTCCACCTCCG...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGAGGAGTCAGGAAGATaGCCTTCCTCACCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGEESGR*PSSPPL
Trigger: CAGTGGGGGTGAGGAAGGGCATCTTCCTGACTCCTC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTAGAGTGAGTCGTCAGTaGCGGGGAAGAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPRVSRQ*RGRGGP
Trigger: AGGACCCCCTCTTCCCCGCCACTGACGACTCACTCT...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCCCCTGGTGCAGGTCGTaGGAGCTGATGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: SADSRALGKCAQWIESLSPWCRS*ELMPST
Trigger: TGTGGATGGCATCAGCTCCCACGACCTGCACCAGGG...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp ACAAATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGCCCTGGTGCAGGTCGTaGGAGCTGATGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: TNVTCIFSQFQPEQEPGRPWCRS*ELMPST
Trigger: TGTGGATGGCATCAGCTCCCACGACCTGCACCAGGG...CCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTAACAGCCTGCCAGTTTaGCATAGGCCTTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSNSLPV*HRPSPL
Trigger: TAGTGGAGAAGGCCTATGCCAAACTGGCAGGCTGTT...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACTCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LILLVVHFLAPHMAQGQDSSHVL*MLRWDV
Trigger: CACATCCCACCTGAGCATCCACAAGACGTGGGAGGA...GTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CCCGGCCCCAGGCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACAATGTACTGTGGGTTCTaGAAGAAGGTGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PGPRPRFLRGSPGFQERTMYCGF*KKVSLW
Trigger: CCACAAGGACACCTTCTTCCAGAACCCACAGTACAT...TGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGGGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGAGGAACTCGCCAGTGTaGCCTGGCTCGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGRNSPV*PGSKVV
Trigger: CACAACCTTCGAGCCAGGCCACACTGGCGAGTTCCT...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTTTCACATTGTACTCTaGTGTGGAGGTGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMFHIVL*CGGALL
Trigger: CAGAAGGGCACCTCCACACCAGAGTACAATGTGAAA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGTTTCACATTGTACTCTaGTGTGGAGGTGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVFHIVL*CGGALL
Trigger: CAGAAGGGCACCTCCACACCAGAGTACAATGTGAAA...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGCCTTTAGGTGCACCTaGCCCAGAAATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGAFRCT*PRNSSF
Trigger: GAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGCCTGGCAGGTTGCTaGGCTGCCGGCTATTTCGGT +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVCLAGC*AAGYFG
Trigger: ACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCA...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCACACAGCAAGTCAGTaGAAGAGTGGGAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGHTASQ*KSGKRT
Trigger: GGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGGGGAAAGTGAGGTCTaGGAGGCTGGGTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRGESEV*EAGLGL
Trigger: TAGGCCCAACCCAGCCTCCCAGACCTCACTTTCCCC...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTTAGCCTGAGGTGCAAGCTGGCTCACTTCACCCCCTACTCAGGAGCCTTGATTTTGCTACACCTGGTCTaGAAGCCCGAGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: VSLRCKLAHFTPYSGALILLHLV*KPEKGT
Trigger: TGTGCCCTTCTCGGGCTTCCAGACCAGGTGTAGCAA...AATCAAGGCTCCTGAGTAGGGGGTGAAGTGAGCCAGCTTGCACCTCAGGCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCGTCCCGCCTCAGGGCTaGGTAGTTCTGGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: SADSRALGKCAQWIESLSVPPQG*VVLVLI
Trigger: TATGAGGACCAGAACTACTCAGCCCTGAGGCGGGAC...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCTTCCAGTCTGGGATaGCCTTTTGCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRPSSLG*PFATAT
Trigger: AGTCGCTGTGGCAAAAGGTCATCCCAGACTGGAAGG...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCACCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPPTSLT*RRPVGR
Trigger: ACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGG...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCACCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPPTSLT*RRPVGR
Trigger: ACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGG...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAAGACGCTGCGTaGGTTGATGTAGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSQEDAA*VDVDGA
Trigger: AGCTCCATCTACATCAACTCACGCAGCGTCTTCCTG...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRWRAHQ*RLGAGT
Trigger: AGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCA...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVVGRTI*NLSKET
Trigger: AGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCAC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAAGCAGTGGTGACAGTTaGGGTGGGGAGGACTATTTG +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPSSGDS*GGEDYL
Trigger: CAAATAGTCCTCCCCACCTCAACTGTCACCACTGCT...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTCGTGTGTAAACAAGTaGCATCTTCTTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGSCVNK*HLLGAP
Trigger: AGGAGCGCCAAGAAGATGTCACTTGTTTACACACGA...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGCTAGGTATCTGCCTCTaGGAGGACCTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGLGICL*EDLRTE
Trigger: CTCTGTCCTCAGGTCCTCTCAGAGGCAGATACCTAG...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCCCCTGTGGTGGATCCTaGGAAGAGGGAAGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVPCGGS*EEGSLG
Trigger: ACCTAGGCTTCCCTCTTCTCAGGATCCACCACAGGG...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCACAAACCAGCAGTTaGCCACCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYPQTSS*PPGPGA
Trigger: TGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGG...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTTCTGGGATGACCTTTTaGCACAGCGACTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPSGMTF*HSDSRE
Trigger: CTCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGA...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTTCGGGGTCCCATTCCTaGTCCTTCCAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPSGSHS*SFQSGM
Trigger: CATCCCAGACTGGAAGGAGCAGGAATGGGACCCCGA...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCATCAGTGACGGCGTATaGGTGGCCCTTTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SADSRALGKCAQWIESLSISDGV*VALYQA
Trigger: GGCCTGGTAAAGGGCCACGCATACGCCGTCACTGAT...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGTTGGCCGCTGCTGGATaGAGATCAGGACTTCATCTT +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRLAAAG*RSGLHL
Trigger: AAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAA...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGTTGTGCTGCAGGCTGTaGATGCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRLCCRL*MRYWRF
Trigger: GAACCGCCAGTACCGCATGCACAGCCTGCAGCACAA...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATACTCTGGTGTGGAGGTaGCCTTCTGCACAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYTLVWR*PSAQPS
Trigger: GCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCTCCACGAGAATGGAATaGTTCGGGGCCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: SADSRALGKCAQWIESLSSTRME*FGALGT
Trigger: TGTCCCGAGGGCCCCGAAGCATTCCATTCTCGTGGA...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCTGCTCCTTCCAGTCTaGGATGACCTTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQLLLPV*DDLLPQ
Trigger: CTGTGGCAAAAGGTCATCCCAGACTGGAAGGAGCAG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAATGCCCGCGTAGGCGTTaGGCTTTTCGGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RQQDLESESQVPKRKSQQCPRRR*AFRGPI
Trigger: AATGGGACCCCGAAAAGCCCAACGCCTACGCGGGCA...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAACAGCCTGCCAGTTTaGCATAGGCCTTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRNSLPV*HRPSPL
Trigger: TAGTGGAGAAGGCCTATGCCAAACTGGCAGGCTGTT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQLWMLR*DVLITR
Trigger: CCGCGTGATCAACACATCCCACCTGAGCATCCACAA...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDLWMLR*DVLITR
Trigger: CCGCGTGATCAACACATCCCACCTGAGCATCCACAA...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGTCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGSSHVL*MLRWDV
Trigger: CACATCCCACCTGAGCATCCACAAGACGTGGGAGGA...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGATCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRSSHVL*MLRWDV
Trigger: CACATCCCACCTGAGCATCCACAAGACGTGGGAGGA...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCTCGCCAGTGTGGCCTaGCTCGAAGGTTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYLASVA*LEGCGD
Trigger: ATCCCCACAACCTTCGAGCCAGGCCACACTGGCGAG...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGAACTCGCCAGTGTaGCCTGGCTCGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVRNSPV*PGSKVV
Trigger: CACAACCTTCGAGCCAGGCCACACTGGCGAGTTCCT...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGTTTCACATTGTACTCTaGTGTGGAGGTGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKFHIVL*CGGALL
Trigger: CAGAAGGGCACCTCCACACCAGAGTACAATGTGAAA...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTCCTTCAGCACTCGGTaGTTCCAGACCTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQSFSTR*FQTCTV
Trigger: CACTGTACAGGTCTGGAACCACCGAGTGCTGAAGGA...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGTCCTTCAGCACTCGGTaGTTCCAGACCTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKSFSTR*FQTCTV
Trigger: CACTGTACAGGTCTGGAACCACCGAGTGCTGAAGGA...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCACTCCTCCACGAGAATaGAATGCTTCGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVTPPRE*NASGPS
Trigger: CGAGGGCCCCGAAGCATTCCATTCTCGTGGAGGAGT...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCGGAAAATGTGCTCAATaGATAGAGTCCCTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCGKCAQ*IESLSS
Trigger: ACTGCTAAGGGACTCTATCCATTGAGCACATTTTCC...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAGGCAAGAACGGAGCTTaGGGATGTGGCAGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKGKNGA*GCGSSC
Trigger: ACACGAACTGCCACATCCCCAAGCTCCGTTCTTGCC...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCGGCAAGAACGGAGCTTaGGGATGTGGCAGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRGKNGA*GCGSSC
Trigger: ACACGAACTGCCACATCCCCAAGCTCCGTTCTTGCC...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTAGAGTCCTTTCAAGGTaGGAGAACACCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSRVLSR*ENTRYC
Trigger: GCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCT...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCATTGTCGTTCATTTCCTaGCCCCTCATATGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPLSFIS*PLIWPR
Trigger: CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAA...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAATGTCCCCTAACCCTGTaGTGGATCCTGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKCPLTL*WILRRG
Trigger: CCCTCTTCTCAGGATCCACCACAGGGTTAGGGGACA...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGCCCTTATAGTAGAGTaGGTCGTCAGTGGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVALIVE*VVSGGE
Trigger: TTCCCCGCCACTGACGACTCACTCTACTATAAGGGC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCGCAGGTCGTGGGAGCTaGTGCCATCCACAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGAGRGS*CHPQRG
Trigger: GCCTCTTTGTGGATGGCATCAGCTCCCACGACCTGC...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCATCTTCTGGCTTCTTaGCTTCGAAGATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGHLLAS*LRRCTV
Trigger: CACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp GGGCAGGAAGCAAGGGTAGCACTGTGGAACCTGTTTTTGTCAGGGGGTGGCAGGGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: GQEARVALWNLFLSGGGRVGRTI*NLSKET
Trigger: AGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCAC...CCTGCCACCCCCTGACAAAAACAGGTTCCACAGTGCTACCCTTGCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp AGATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCATCGTGTGTAAACAAGTaGCATCTTCTTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSQVGHGTSAHEEFSRGPSCVNK*HLLGAP
Trigger: AGGAGCGCCAAGAAGATGTCACTTGTTTACACACGA...TGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGTCGTGTGTAAACAAGTaGCATCTTCTTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRSCVNK*HLLGAP
Trigger: AGGAGCGCCAAGAAGATGTCACTTGTTTACACACGA...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGTTGGCAAATCTCCACTaGGTGAGGAAATGGATGGGT +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRLANLH*VRKWMG
Trigger: ACCCATCCATTTCCTCACTCAGTGGAGATTTGCCAA...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR TCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTCCAGCCAGAACACTaGTCCAGACAGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILLQPEH*SRQQDL
Trigger: CAGATCCTGCTGTCTGGATCAGTGTTCTGGCTGGAG...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTCCTACTCAGGAGCCTTaGTTTGAAATAGACATCGAG +
Preference number: 4 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSPTQEP*FEIDIE
Trigger: CTCGATGTCTATTTCAAATCAAGGCTCCTGAGTAGG...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGGGCCTGGTAACAGCCTaGCAGTTTGGCATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVGLVTA*QFGIGL
Trigger: AAGGCCTATGCCAAACTGGCAGGCTGTTACCAGGCC...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCGGCCTCCATGTCAGCTaGTGTCACTGCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILGLHVS*CHCLDG
Trigger: TCCATCAAGGCAGTGACAGCAGCTGACATGGAGGCC...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATATCAGTGACGGCGTATaGGTGGCCCTTTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYISDGV*VALYQA
Trigger: GGCCTGGTAAAGGGCCACGCATACGCCGTCACTGAT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCTTGGCCGCTGCTGGATaGAGATCAGGACTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSLAAAG*RSGLHL
Trigger: AAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAA...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACT +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYDRFGR*WMQIRT
Trigger: AGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTC...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCGTGGAGGTGCCCTTCTaGACAGCCGAGCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: RKNTLILLVVHFLAPHMAVEVPF*TAERTL
Trigger: CAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCAC...GGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCGTGGAGGTGCCCTTCTaGACAGCCGAGCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGVEVPF*TAERTL
Trigger: CAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCAC...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGTCTTGCGGTAGAAGATaGCTTTCACATTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMSCGRR*LSHCTL
Trigger: CAGAGTACAATGTGAAAGGCATCTTCTACCGCAAGA...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGCTGCACTTTTTCATTTaGTACACCTGGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKLHFFI*YTWSGS
Trigger: GCTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAG...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATTCACACACGAGAACATaGTGGCTGCTGCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYSHTRT*WLLPQG
Trigger: TCCCTGGGGCAGCAGCCACCATGTTCTCGTGTGTGA...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCAACAGCCTGCCAGTTTaGCATAGGCCTTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSNSLPV*HRPSPL
Trigger: TAGTGGAGAAGGCCTATGCCAAACTGGCAGGCTGTT...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCGTGACGGCGTATGCGTaGCCCTTTACCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFVTAYA*PFTRPH
Trigger: GTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCAC...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCAAGAAGGTGTCCTTGTaGTTGATGCAGCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILKKVSL*LMQPPP
Trigger: CGGTGGCGGCTGCATCAACCACAAGGACACCTTCTT...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGATGTACTGTGGGTTCTaGAAGAAGGTGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRMYCGF*KKVSLW
Trigger: CCACAAGGACACCTTCTTCCAGAACCCACAGTACAT...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGGACTTCATCTTCTaGCTTCTTGACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMQDFIF*LLDFED
Trigger: ATCTTCGAAGTCAAGAAGCCAGAAGATGAAGTCCTG...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATAGAGTTAGCCCCTGTTaGGGAGTCCTTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYRVSPC*GVLEAS
Trigger: GCTGGCCTCAAGGACTCCCCAACAGGGGCTAACTCT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKTCRWW*ERSEPG
Trigger: ACCTGGCTCTGACCGTTCCCACCACCATCTGCATGT...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCACACAGCAAGTCAGTaGAAGAGTGGGAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSHTASQ*KSGKRT
Trigger: GGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCGGAGCTTGGGGATGTaGCAGTTCGTGTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQRSLGM*QFVCKQ
Trigger: TTGTTTACACACGAACTGCCACATCCCCAAGCTCCG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGGGCAAGAACGGAGCTTaGGGATGTGGCAGTTCGTGT +
Preference number: 4 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVGKNGA*GCGSSC
Trigger: ACACGAACTGCCACATCCCCAAGCTCCGTTCTTGCC...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAGAGTCCTTTCAAGGTaGGAGAACACCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRRVLSR*ENTRYC
Trigger: GCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp AGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGAAACACCACCCGTaGAGTCCACCAGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RKNTLILLVVHFLAPHMAQKHHP*SPPVRL
Trigger: CAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTG...GGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTCCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPPTSLT*RRPVGR
Trigger: ACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGG...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACAGGAAGACGCTGCGTaGGTTGATGTAGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQQEDAA*VDVDGA
Trigger: AGCTCCATCTACATCAACTCACGCAGCGTCTTCCTG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR TCA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGAGCAGTGGTGACAGTTaGGGTGGGGAGGACTATTTG +
Preference number: 4 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRSSGDS*GGEDYL
Trigger: CAAATAGTCCTCCCCACCTCAACTGTCACCACTGCT...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCTTGGCAAATCTCCACTaGGTGAGGAAATGGATGGGT +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSLANLH*VRKWMG
Trigger: ACCCATCCATTTCCTCACTCAGTGGAGATTTGCCAA...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR GCA 90 bp AGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKNTLILLVVHFLAPHMAREVHQ*VCCVAS
Trigger: GGAGGCAACACAGCAGACGCACTGGTGGACTTCACG...GGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGCTCTTGCTCACTTTCTaGCACTCCTCCGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKLLLTF*HSSEVS
Trigger: TGACACCTCGGAGGAGTGGCAGAAAGTGAGCAAGAG...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp AATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCTTGGCCGCTGCTGGATaGAGATCAGGACTTCATCTT +
Preference number: 4 (lower is better)
Translates to: NVTCIFSQFQPEQEPGRSLAAAG*RSGLHL
Trigger: AAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAA...GCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTCTTGCGGTAGAAGATaGCTTTCACATTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGSCGRR*LSHCTL
Trigger: CAGAGTACAATGTGAAAGGCATCTTCTACCGCAAGA...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPLWMLR*DVLITR
Trigger: CCGCGTGATCAACACATCCCACCTGAGCATCCACAA...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CAGAGGACCAGCAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: QRTSKTAYFPNSSLSRNPLWMLR*DVLITR
Trigger: CCGCGTGATCAACACATCCCACCTGAGCATCCACAA...CGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTGCTGGTCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATTCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYSSHVL*MLRWDV
Trigger: CACATCCCACCTGAGCATCCACAAGACGTGGGAGGA...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATAAGAAGGTGTCCTTGTaGTTGATGCAGCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYKKVSL*LMQPPP
Trigger: CGGTGGCGGCTGCATCAACCACAAGGACACCTTCTT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCAGGACTTCATCTTCTaGCTTCTTGACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGQDFIF*LLDFED
Trigger: ATCTTCGAAGTCAAGAAGCCAGAAGATGAAGTCCTG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCAGGAACTCGCCAGTGTaGCCTGGCTCGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RKNTLILLVVHFLAPHMARNSPV*PGSKVV
Trigger: CACAACCTTCGAGCCAGGCCACACTGGCGAGTTCCT...GGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp ACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTGGAGCCAAGAAGATCCTTCAGCACTCGGTaGTTCCAGACCTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: TSAHEEFSRGPAKLEPRRSFSTR*FQTCTV
Trigger: CACTGTACAGGTCTGGAACCACCGAGTGCTGAAGGA...TCTTCTTGGCTCCAGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp GGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGCCTGGCAGGTTGCTaGGCTGCCGGCTATTTCGGT +
Preference number: 4 (lower is better)
Translates to: GSPGFQERTLLSSLSFISCLAGC*AAGYFG
Trigger: ACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCA...GGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAACAAGTGACATCTTCTTaGCGCTCCTCGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RQQDLESESQVPKRKSQQQVTSS*RSSADS
Trigger: GCTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTG...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCCGGAGCTTGGGGATGTaGCAGTTCGTGTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRRSLGM*QFVCKQ
Trigger: TTGTTTACACACGAACTGCCACATCCCCAAGCTCCG...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTCCAGACAGCAGGATCTaGAGTCGGAAAGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPPDSRI*SRKVRF
Trigger: GAACCTGACTTTCCGACTCCAGATCCTGCTGTCTGG...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGTCCTGGCCCCTCATATaGCCCAGGGCCAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMSWPLI*PRAKTQ
Trigger: CTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGA...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCTCCAGACCTGTACAGTaGTGGGCTGGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGSRPVQ*WAGSAS
Trigger: AGAAGCTGAGCCAGCCCATCACTGTACAGGTCTGGA...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCTCGGGGTCCCATTCCTaGTCCTTCCAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFSGSHS*SFQSGM
Trigger: CATCCCAGACTGGAAGGAGCAGGAATGGGACCCCGA...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGTGCGTCTGCTGTGTTaGCTCCATCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMVRLLC*LHPGPG
Trigger: ACCAGGCCCTGGATGGAGGCAACACAGCAGACGCAC...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCTTGGCCGCTGCTGGATaGAGATCAGGACTTCATCTT +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILLAAAG*RSGLHL
Trigger: AAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAA...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCCTTAGGAAAATGTaGTCAATGGATAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPGLRKM*SMDRVP
Trigger: AGGGACTCTATCCATTGAGCACATTTTCCTAAGGCC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp AGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTAGTGAACAAAGTAATTaGTCTCCCCTATCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SGSRHQCSRRVLQRTSKTSEQSN*SPLSPL
Trigger: CAGGGGTGATAGGGGAGAGCAATTACTTTGTTCACT...AGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCATGTACTGTGGGTTCTaGAAGAAGGTGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRMYCGF*KKVSLW
Trigger: CCACAAGGACACCTTCTTCCAGAACCCACAGTACAT...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCGCTTTGGCCGCTGCTaGATGCAGATCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: RKNTLILLVVHFLAPHMARFGRC*MQIRTS
Trigger: TGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCG...GGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCGCTTTGGCCGCTGCTaGATGCAGATCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGRFGRC*MQIRTS
Trigger: TGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCG...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGTTTCACATTGTACTCTaGTGTGGAGGTGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGFHIVL*CGGALL
Trigger: CAGAAGGGCACCTCCACACCAGAGTACAATGTGAAA...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCGCCTTTAGGTGCACCTaGCCCAGAAATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILAFRCT*PRNSSF
Trigger: GAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGC...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAAGAGTCCTTTCAAGGTaGGAGAACACCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKRVLSR*ENTRYC
Trigger: GCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCT...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTTTCATTTGCTACACCTaGTCTGGAAGCCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPFICYT*SGSPRR
Trigger: CCTTCTCGGGCTTCCAGACCAGGTGTAGCAAATGAA...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTTCATTTGCTACACCTaGTCTGGAAGCCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVFICYT*SGSPRR
Trigger: CCTTCTCGGGCTTCCAGACCAGGTGTAGCAAATGAA...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CAA 72 bp AGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTaGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPGFQERTLLSS*SFISWPLIWPR
Trigger: CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
3UTR CAA 72 bp GCACTCGGTAGTAACAGTGCTGACACACAAGAATCATaGGCCCCACTTTGTAGAAGGGGGAAATCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ALGSNSADTQES*APLCRRGKSRH
Trigger: GTGCCTCGATTTCCCCCTTCTACAAAGTGGGGCCAATGATTCTTGTGTGTCAGCACTGTTACTACCGAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACATCTTCTGGCTTCTTaGCTTCGAAGATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRHLLAS*LRRCTV
Trigger: CACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATG...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFWRAHQ*RLGAGT
Trigger: AGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCA...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCCAAATCTCCACTGAGTaGGGAAATGGATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVQISTE*GNGWVR
Trigger: TCTCACCCATCCATTTCCTCACTCAGTGGAGATTTG...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR TCA 90 bp GCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGGACACAAATCTCCACTGAGTaGGGAAATGGATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: AGSGVGKSGSQKEIPARTQISTE*GNGWVR
Trigger: TCTCACCCATCCATTTCCTCACTCAGTGGAGATTTG...TGTCCTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCAGGGATTCCTGTTCTTaGATTAACTGCACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGRDSCS*INCTFS
Trigger: TGAAAAAGTGCAGTTAATTCAAGAACAGGAATCCCT...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCGCACCAAAACTCATTaGGGGAGTTGGAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VPAFKKEHSYPPCRSFPGRTKTH*GSWSGS
Trigger: ACTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCG...GCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCTCTTGCGGTAGAAGATaGCTTTCACATTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSSCGRR*LSHCTL
Trigger: CAGAGTACAATGTGAAAGGCATCTTCTACCGCAAGA...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp ACAAATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGATGTACTGTGGGTTCTaGAAGAAGGTGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TNVTCIFSQFQPEQEPGRMYCGF*KKVSLW
Trigger: CCACAAGGACACCTTCTTCCAGAACCCACAGTACAT...CCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACCAGGACTTCATCTTCTaGCTTCTTGACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDQDFIF*LLDFED
Trigger: ATCTTCGAAGTCAAGAAGCCAGAAGATGAAGTCCTG...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGAGAGTTAGCCCCTGTTaGGGAGTCCTTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMRVSPC*GVLEAS
Trigger: GCTGGCCTCAAGGACTCCCCAACAGGGGCTAACTCT...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGGAAAATGTGCTCAATaGATAGAGTCCCTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQGKCAQ*IESLSS
Trigger: ACTGCTAAGGGACTCTATCCATTGAGCACATTTTCC...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTAGAGTCCTTTCAAGGTaGGAGAACACCAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPRVLSR*ENTRYC
Trigger: GCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCT...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMWRAHQ*RLGAGT
Trigger: AGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCA...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVVGRTI*NLSKET
Trigger: AGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCAC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGTGGGGAGGACTATTTaGAATCTCAGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPVGRTI*NLSKET
Trigger: AGTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCAC...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGATGGGATTAGAGAATaGACAAATGTCACCTGCATA +
Preference number: 4 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPDGIRE*TNVTCI
Trigger: TATGCAGGTGACATTTGTTCATTCTCTAATCCCATC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGATGGGATTAGAGAATaGACAAATGTCACCTGCATA +
Preference number: 4 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQDGIRE*TNVTCI
Trigger: TATGCAGGTGACATTTGTTCATTCTCTAATCCCATC...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR TCA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGAGGGATTCCTGTTCTTaGATTAACTGCACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRRDSCS*INCTFS
Trigger: TGAAAAAGTGCAGTTAATTCAAGAACAGGAATCCCT...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGATCAGGAGCCTTGATTTaGAATAGACATCGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SYPPCRSFPGPSYGPGPRSGALI*NRHREV
Trigger: CACTTCTCGATGTCTATTTCAAATCAAGGCTCCTGA...TCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR GCA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACT +
Preference number: 4 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYDRFGR*WMQIRT
Trigger: AGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTC...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGTCTTGCGGTAGAAGATaGCTTTCACATTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGSCGRR*LSHCTL
Trigger: CAGAGTACAATGTGAAAGGCATCTTCTACCGCAAGA...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATTCCACGAGAATGGAATaGTTCGGGGCCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYSTRME*FGALGT
Trigger: TGTCCCGAGGGCCCCGAAGCATTCCATTCTCGTGGA...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GCCCAGGTTCTTGAGGGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTGCACTTTTTCATTTaGTACACCTGGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AQVLEGKSRLSRKNTLILLHFFI*YTWSGS
Trigger: GCTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAG...GAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCCCTCAAGAACCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATAAGTCAGTGGAAGAGTaGGAAAAGGACCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYKSVEE*EKDPSI
Trigger: GATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp GATTTATTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTGGTGGATCCTGCGGAGCTTGGGGATGTaGCAGTTCGTGTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: DLLRIEQASCPLTLWWILRSLGM*QFVCKQ
Trigger: TTGTTTACACACGAACTGCCACATCCCCAAGCTCCG...CAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGCCAAGAAGAAAAATaGAGGTTCAGGCTTTCAATT +
Preference number: 4 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLSQEEK*RFRLSI
Trigger: AATTGAAAGCCTGAACCTCCATTTTTCTTCTTGGCT...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR TCA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGATGGGATTAGAGAATaGACAAATGTCACCTGCATA +
Preference number: 4 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGDGIRE*TNVTCI
Trigger: TATGCAGGTGACATTTGTTCATTCTCTAATCCCATC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR GCA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATAACTCACCGTCGTCCTaGACGGTCACACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYNSPSS*TVTPIF
Trigger: GAAGATGGGTGTGACCGTGCAGGACGACGGTGAGTT...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGTCTTGCGGTAGAAGATaGCTTTCACATTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKSCGRR*LSHCTL
Trigger: CAGAGTACAATGTGAAAGGCATCTTCTACCGCAAGA...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR GCA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGAGGACCAGCAAAACTaGATATTTTCCCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: ESFQGGRTPGIADGESEVEDQQN*IFSQFQ
Trigger: CTGGAATTGGGAAAATATGCAGTTTTGCTGGTCCTC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR GCA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATTGCGGCCTCCTAGGCTaGATTTTGGGGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYCGLLG*ILGECW
Trigger: CCAACATTCCCCCAAAATGCAGCCTAGGAGGCCGCA...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CCA 90 bp ACAAATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGCAGGACTTCATCTTCTaGCTTCTTGACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: TNVTCIFSQFQPEQEPGRQDFIF*LLDFED
Trigger: ATCTTCGAAGTCAAGAAGCCAGAAGATGAAGTCCTG...CCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CCA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACAGGACTTCATCTTCTaGCTTCTTGACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQQDFIF*LLDFED
Trigger: ATCTTCGAAGTCAAGAAGCCAGAAGATGAAGTCCTG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR CCA 90 bp GGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCGCCTTTAGGTGCACCTaGCCCAGAAATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: GSPGFQERTLLSSLSFISAFRCT*PRNSSF
Trigger: GAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGC...GGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCAAGGGTAGCACTGTaGAACCTGTTTTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMARVAL*NLFLSG
Trigger: CCCTGACAAAAACAGGTTCCACAGTGCTACCCTTGC...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648180.1
3UTR CAA 72 bp GGGATTCCTGTTCTTGAATTAACTGCACTTTTTCATTaGCTACACCTGGTCTGGAAGCCCGAGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GIPVLELTALFH*LHLVWKPEKGT
Trigger: TGTGCCCTTCTCGGGCTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAGTTAATTCAAGAACAGGAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR TCA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGCATCTTCTGGCTTCTTaGCTTCGAAGATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMHLLAS*LRRCTV
Trigger: CACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATG...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CCA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCGGAAAATGTGCTCAATaGATAGAGTCCCTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFGKCAQ*IESLSS
Trigger: ACTGCTAAGGGACTCTATCCATTGAGCACATTTTCC...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp AGAAGGCCAGTAGGCCGTGGCCCAGGCGCACCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCTTTACCAGGCCGCACGCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: RRPVGRGPGAPCAHQ*RRMRGPLPGRTPGG
Trigger: CCCGCCTGGCGTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp CCACCGCGGTTCTGTCGCGGGTCCTCATGCAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCACGTCTTGTGGATGCTCAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: PPRFCRGSSCSVQAP*SRASSHVLWMLRWD
Trigger: ATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCTGCATGAGGACCCGCGACAGAACCGCGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp TTGTGGTTGATGCAGCCGCCACCGCGGTTCTGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGCAGCCGGGCCTCCTCCCACGTCTTG +
Preference number: 5 (lower is better)
Translates to: LWLMQPPPRFCRGSS*SVQAPCSRASSHVL
Trigger: CAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCTGCATGAGGACCCGCGACAGAACCGCGGTGGCGGCTGCATCAACCACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 90 bp GGTCACCAGCTGGGGGTAGCCACAGAGGGAGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAGCTCCCGGCAGTTGGAGGGCACATC +
Preference number: 5 (lower is better)
Translates to: GHQLGVATEGAPAGV*GLIQAQLPAVGGHI
Trigger: GATGTGCCCTCCAACTGCCGGGAGCTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGCTCCCTCTGTGGCTACCCCCAGCTGGTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 90 bp GCCTCAGGTTCCAGGCCAGGCGGTGCGGCCATAGGTGACCCCACCTaGCTATGCTCAAGGATGCCTCCTCCTGGTGCCCAGCAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: ASGSRPGGAAIGDPT*LCSRMPPPGAQQGL
Trigger: GAGGCCTTGCTGGGCACCAGGAGGAGGCATCCTTGAGCATAGCCAGGTGGGGTCACCTATGGCCGCACCGCCTGGCCTGGAACCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 90 bp GGGGCTCATCCAGGCGCAGCTCCCGGCAGTTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACTCGCCAGTGTGGCCTGGCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: GAHPGAAPGSWRAHQ*RLGAGTRQCGLARR
Trigger: CCTTCGAGCCAGGCCACACTGGCGAGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCGCCTGGATGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 90 bp CACGTGGAAGGCCTCAGGTTCCAGGCCAGGCGGTGCGGCCATAGGTaGCCCCACCTGGCTATGCTCAAGGATGCCTCCTCCTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: HVEGLRFQARRCGHR*PHLAMLKDASSWCP
Trigger: TGGGCACCAGGAGGAGGCATCCTTGAGCATAGCCAGGTGGGGTCACCTATGGCCGCACCGCCTGGCCTGGAACCTGAGGCCTTCCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS GCA 90 bp GACGAGCAGGCTGCCACAAACCAGCAGTTGCCCACCTGGCCCTGGTaGAGGTCGTGGGAGCTGATGCCATCCACAAAGAGGCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: DEQAATNQQLPTWPW*RSWELMPSTKRRGS
Trigger: GGACCCCCGCCTCTTTGTGGATGGCATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCAGCCTGCTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000533889.1
ENST00000648180.1
CDS GCA 90 bp GGTTCCAGGCCAGGCGGTGCGGCCATAGGTGACCCCACCTGGCTATaGTCAAGGATGCCTCCTCCTGGTGCCCAGCAAGGCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: GSRPGGAAIGDPTWL*SRMPPPGAQQGLQC
Trigger: GCATTGGAGGCCTTGCTGGGCACCAGGAGGAGGCATCCTTGAGCATAGCCAGGTGGGGTCACCTATGGCCGCACCGCCTGGCCTGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS-3UTR CAA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGTGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCG +
Preference number: 5 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGWPRRT*RTSVTA
Trigger: CGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCA...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAGCCAGGTTCTCACCCTaGCCCTCCCGGCGCGTAGAC +
Preference number: 5 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRARFSP*PSRRVD
Trigger: GTCTACGCGCCGGGAGGGCAAGGGTGAGAACCTGGC...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp AGTCGTCAGTGGCGGGGAAGAGGGGGTCCTCGAAGAGCACCTTCCTaGGCCGGCAGTCCCGCCTCAGGGCTGAGTAGTTCTGGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: SRQWRGRGGPRRAPS*AGSPASGLSSSGPH
Trigger: ATGAGGACCAGAACTACTCAGCCCTGAGGCGGGACTGCCGGCGCAGGAAGGTGCTCTTCGAGGACCCCCTCTTCCCCGCCACTGACGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS GCA 90 bp AGGTTGCTGGGCTGCCGGCTATTTCGGTCCCGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCCGGGTCAGCCTTTAGGTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: RLLGCRLFRSRRWRV*RAWRLSGSAFRCTW
Trigger: CCAGGTGCACCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAATAGCCGGCAGCCCAGCAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 90 bp AGCCATGAGGGAGGTGCTGCTGAGAATGTGCACGGCCACAGTGCCTaGCAGGTTGCTGGGCTGCCGGCTATTTCGGTCCCGGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SHEGGAAENVHGHSA*QVAGLPAISVPEVE
Trigger: CTCCACCTCCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCACCTCCCTCATGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGATNQQ*PTWPWC
Trigger: GCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGC...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp CCAGTCTGGGATGACCTTTTGCCACAGCGACTCCCGGGAGGCAAGTaGCGAGCAGGCTGCCACAAACCAGCAGTTGCCCACCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PVWDDLLPQRLPGGK*RAGCHKPAVAHLAL
Trigger: CAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCAGCCTGCTCGTCACTTGCCTCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000533889.1
ENST00000648180.1
CDS TCA 90 bp CGCCCCAGGGGTTGCGCAGGCGGATCATGTCCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGTGGCCCAGGCGCACCTTGCGCACAT +
Preference number: 5 (lower is better)
Translates to: RPRGCAGGSCPTSLT*RRPVGRGPGAPCAH
Trigger: ATGTGCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGACATGATCCGCCTGCGCAACCCCTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp CTATGCTCAAGGATGCCTCCTCCTGGTGCCCAGCAAGGCCTCCAATaGAGGAAGGCTAAGGGGCTGCAAGGGGCCCTGAGGCCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LCSRMPPPGAQQGLQ*RKAKGLQGALRPEG
Trigger: TCCCTCAGGCCTCAGGGCCCCTTGCAGCCCCTTAGCCTTCCTGCATTGGAGGCCTTGCTGGGCACCAGGAGGAGGCATCCTTGAGCATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVATNQQ*PTWPWC
Trigger: GCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGAGTGCGTCTGCTGTGTaGCCTCCATCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGSASAV*PPSRAW
Trigger: CCAGGCCCTGGATGGAGGCAACACAGCAGACGCACT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCATGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCG +
Preference number: 5 (lower is better)
Translates to: LVVHFLAPHMAQGQDPGAWPRRT*RTSVTA
Trigger: CGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCA...TGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCGCCAGGTTCTCACCCTaGCCCTCCCGGCGCGTAGAC +
Preference number: 5 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGARFSP*PSRRVD
Trigger: GTCTACGCGCCGGGAGGGCAAGGGTGAGAACCTGGC...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGCGCAGCTCCCGGCAGTaGGAGGGCACATCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGRSSRQ*EGTSVK
Trigger: CTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCG...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATGCAGGGCCTGGAGGTaGTCCGGGTCAGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRCRAWR*SGSAFR
Trigger: CCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCA...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 90 bp GAGGCAAGTGACGAGCAGGCTGCCACAAACCAGCAGTTGCCCACCTaGCCCTGGTGCAGGTCGTGGGAGCTGATGCCATCCACAAAGAGG +
Preference number: 5 (lower is better)
Translates to: EASDEQAATNQQLPT*PWCRSWELMPSTKR
Trigger: CCTCTTTGTGGATGGCATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCAGCCTGCTCGTCACTTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000533889.1
ENST00000648180.1
CDS CCA 90 bp TGCAGCGTCCAGGCGCCATGCAGCCGGGCCTCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTGTTGATCACGCGGCACTTGATGATG +
Preference number: 5 (lower is better)
Translates to: CSVQAPCSRASSHVL*MLRWDVLITRHLMM
Trigger: CATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGAGTGCGTCTGCTGTGTaGCCTCCATCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMSASAV*PPSRAW
Trigger: CCAGGCCCTGGATGGAGGCAACACAGCAGACGCACT...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCTGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCG +
Preference number: 5 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLWPRRT*RTSVTA
Trigger: CGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCA...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRASSHV*WMLRWD
Trigger: ATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGC...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCGCAGCTCCCGGCAGTaGGAGGGCACATCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMRSSRQ*EGTSVK
Trigger: CTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCG...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GGGCAGGAAGCAAGGGTAGCACTGTGGAACCTGTTTTTGTCAGGGGGTGGCAGGCCTGTTGGGGAGTCCTaGAGGCCAGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GQEARVALWNLFLSGGGRPVGES*RPAAPR
Trigger: CCTGGGAGCTGCTGGCCTCAAGGACTCCCCAACAGG...CCTGCCACCCCCTGACAAAAACAGGTTCCACAGTGCTACCCTTGCTTCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS GCA 90 bp GGTCAGGTCGATGGGCTCAGAAACACCACCCGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCCATCCAGGGCCTGGTAACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GQVDGLRNTTREVHQ*VCCVASIQGLVTAC
Trigger: GCAGGCTGTTACCAGGCCCTGGATGGAGGCAACACAGCAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTGAGCCCATCGACCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCGCGCACCAAAACTCATaGCGGGAGTTGGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCAHQNS*RELEWQ
Trigger: CTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCGC...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGGCTGCTGTCACTGCCTaGATGGAGGCACTGATGAGG +
Preference number: 5 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGAAVTA*MEALMR
Trigger: CCTCATCAGTGCCTCCATCAAGGCAGTGACAGCAGC...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCGCCAGGTTCTCACCCTaGCCCTCCCGGCGCGTAGAC +
Preference number: 5 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSARFSP*PSRRVD
Trigger: GTCTACGCGCCGGGAGGGCAAGGGTGAGAACCTGGC...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCCTGTTGGGGAGTCCTaGAGGCCAGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRPVGES*RPAAPR
Trigger: CCTGGGAGCTGCTGGCCTCAAGGACTCCCCAACAGG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCTGCAGGGCCTGGAGGTaGTCCGGGTCAGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSCRAWR*SGSAFR
Trigger: CCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCA...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGACAGTGCCTGGCAGGTaGCTGGGCTGCCGGCTATTT +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVTVPGR*LGCRLF
Trigger: AAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCAAGAACGGAGCTaGGGGATGTGGCAGTTCGTG +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVGQERS*GMWQFV
Trigger: CACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCC...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTCCTCGCAGATGCCCTaGGGTCGCTTCCACCTGACG +
Preference number: 5 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGSSQMP*GRFHLT
Trigger: CGTCAGGTGGAAGCGACCCAAGGGCATCTGCGAGGA...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GGGCAGGAAGCAAGGGTAGCACTGTGGAACCTGTTTTTGTCAGGGGGTGGCAGGTCCTCGCAGATGCCCTaGGGTCGCTTCCACCTGACG +
Preference number: 5 (lower is better)
Translates to: GQEARVALWNLFLSGGGRSSQMP*GRFHLT
Trigger: CGTCAGGTGGAAGCGACCCAAGGGCATCTGCGAGGA...CCTGCCACCCCCTGACAAAAACAGGTTCCACAGTGCTACCCTTGCTTCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CAA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCCAGGCCCAGGTTCTaGAGGGGAAGTCCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGPRPRF*RGSPGF
Trigger: AAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGG...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp GTCCTCGAAGAGCACCTTCCTGCGCCGGCAGTCCCGCCTCAGGGCTaGGTAGTTCTGGTCCTCATAGGGCTTCACACACGAGAACATGGT +
Preference number: 5 (lower is better)
Translates to: VLEEHLPAPAVPPQG*VVLVLIGLHTREHG
Trigger: ACCATGTTCTCGTGTGTGAAGCCCTATGAGGACCAGAACTACTCAGCCCTGAGGCGGGACTGCCGGCGCAGGAAGGTGCTCTTCGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp CAAAGTCACCCTCGGTCAGGTCGATGGGCTCAGAAACACCACCCGTaGAGTCCACCAGTGCGTCTGCTGTGTTGCCTCCATCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: QSHPRSGRWAQKHHP*SPPVRLLCCLHPGP
Trigger: AGGCCCTGGATGGAGGCAACACAGCAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTGAGCCCATCGACCTGACCGAGGGTGACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 90 bp ACCTCGGGGCTCCCAGTCCAGCACCAGGTCCTGCAGAGAAAGTGCTaGCAGCAGGTAGATACAGCTGGGCGTCCCTGTGCAGGACATTCT +
Preference number: 5 (lower is better)
Translates to: TSGLPVQHQVLQRKC*QQVDTAGRPCAGHS
Trigger: AGAATGTCCTGCACAGGGACGCCCAGCTGTATCTACCTGCTGTCAGCACTTTCTCTGCAGGACCTGGTGCTGGACTGGGAGCCCCGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527066.5
CDS CCA 90 bp GCGCCATGCAGCCGGGCCTCCTCCCACGTCTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGGCACTTGATGATGTCCGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: APCSRASSHVLWMLR*DVLITRHLMMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 90 bp CAGGGCCCGGTGGCTTCATTCCGTTCTCAAGGTCTGACAGGCACATaGGGTCCCGCCATGCTGACTGTCACCACACACTGGGCATCACAA +
Preference number: 5 (lower is better)
Translates to: QGPVASFRSQGLTGT*GPAMLTVTTHWASQ
Trigger: TTGTGATGCCCAGTGTGTGGTGACAGTCAGCATGGCGGGACCCCATGTGCCTGTCAGACCTTGAGAACGGAATGAAGCCACCGGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS-3UTR CAA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTGCTGCTGTCACTGCCTaGATGGAGGCACTGATGAGG +
Preference number: 5 (lower is better)
Translates to: WVGPRTRGARTELGDVAVAAVTA*MEALMR
Trigger: CCTCATCAGTGCCTCCATCAAGGCAGTGACAGCAGC...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATG +
Preference number: 5 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGLRWDV*ITRHLM
Trigger: CATCAAGTGCCGCGTGATCAACACATCCCACCTGAG...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATG +
Preference number: 5 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGLRWDV*ITRHLM
Trigger: CATCAAGTGCCGCGTGATCAACACATCCCACCTGAG...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATG +
Preference number: 5 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGLRWDV*ITRHLM
Trigger: CATCAAGTGCCGCGTGATCAACACATCCCACCTGAG...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCACCTGTTGGGGAGTCCTaGAGGCCAGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPPVGES*RPAAPR
Trigger: CCTGGGAGCTGCTGGCCTCAAGGACTCCCCAACAGG...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCACAGTGCCTGGCAGGTaGCTGGGCTGCCGGCTATTT +
Preference number: 5 (lower is better)
Translates to: VEEWEKDPSILAPRLDSGTVPGR*LGCRLF
Trigger: AAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGT...GCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACAAGTGACATCTTCTaGGCGCTCCTCGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: WEKDPSILAPRLDSGPVGTSDIF*ALLGRQ
Trigger: CTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTGT...CCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTACAAGTGACATCTTCTaGGCGCTCCTCGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGTSDIF*ALLGRQ
Trigger: CTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTGT...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGCAAGAACGGAGCTaGGGGATGTGGCAGTTCGTG +
Preference number: 5 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSGQERS*GMWQFV
Trigger: CACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCC...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGGGGCAAGAACGGAGCTaGGGGATGTGGCAGTTCGTG +
Preference number: 5 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKGQERS*GMWQFV
Trigger: CACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCC...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp AGATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCATCCTCGCAGATGCCCTaGGGTCGCTTCCACCTGACG +
Preference number: 5 (lower is better)
Translates to: RSQVGHGTSAHEEFSRGPSSQMP*GRFHLT
Trigger: CGTCAGGTGGAAGCGACCCAAGGGCATCTGCGAGGA...TGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp CTTCGAAGATGTACTGTGGGTTCTGGAAGAAGGTGTCCTTGTGGTTaGTGCAGCCGCCACCGCGGTTCTGTCGCGGGTCCTCATGCAGCG +
Preference number: 5 (lower is better)
Translates to: LRRCTVGSGRRCPCG*CSRHRGSVAGPHAA
Trigger: CGCTGCATGAGGACCCGCGACAGAACCGCGGTGGCGGCTGCATCAACCACAAGGACACCTTCTTCCAGAACCCACAGTACATCTTCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp GTCGATGGGCTCAGAAACACCACCCGTGAAGTCCACCAGTGCGTCTaGTGTGTTGCCTCCATCCAGGGCCTGGTAACAGCCTGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: VDGLRNTTREVHQCV*CVASIQGLVTACQF
Trigger: AAACTGGCAGGCTGTTACCAGGCCCTGGATGGAGGCAACACAGCAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTGAGCCCATCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp AGGTTCTCACCCTTGCCCTCCCGGCGCGTAGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACTTCATCTTCTGGCTTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: RFSPLPSRRVDRFGR*WMQIRTSSSGFLTS
Trigger: CGAAGTCAAGAAGCCAGAAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGCCGGGAGGGCAAGGGTGAGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp TGGAGGGTATGCAGGGCCTGGAGGTTGTCCGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCATCCTTCAGCACTCGGTGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: WRVCRAWRLSGSAFR*TWPRNSSFSTRWFQ
Trigger: CTGGAACCACCGAGTGCTGAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCATACCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 90 bp AATGGCCAGGTTCTCACCCTTGCCCTCCCGGCGCGTAGACCGCTTTaGCCGCTGCTGGATGCAGATCAGGACTTCATCTTCTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: NGQVLTLALPARRPL*PLLDADQDFIFWLL
Trigger: AAGAAGCCAGAAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGCCGGGAGGGCAAGGGTGAGAACCTGGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGATNQQ*PTWPWC
Trigger: GCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp AGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGCGCACCAAAACTCATaGCGGGAGTTGGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RVGKGPQYPGSQARLRPSAHQNS*RELEWQ
Trigger: CTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCGC...ACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGAGTGCGTCTGCTGTGTaGCCTCCATCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKSASAV*PPSRAW
Trigger: CCAGGCCCTGGATGGAGGCAACACAGCAGACGCACT...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCLLVSS*AKSPSV
Trigger: GACCGAGGGTGACTTTGCCAACGATGAGACTAAGAG...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCTGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCG +
Preference number: 5 (lower is better)
Translates to: SADSRALGKCAQWIESLSWPRRT*RTSVTA
Trigger: CGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCA...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGGACATGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCG +
Preference number: 5 (lower is better)
Translates to: AGSGVGKSGSQKEIPARTWPRRT*RTSVTA
Trigger: CGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCA...TGTCCTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCTCCAACTTCTCTGACTaGAAGAAGGCCAGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCSNFSD*KKASRP
Trigger: CGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGA...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTTCCAACTTCTCTGACTaGAAGAAGGCCAGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGSNFSD*KKASRP
Trigger: CGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGA...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGATCCAACTTCTCTGACTaGAAGAAGGCCAGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRSNFSD*KKASRP
Trigger: CGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGA...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACAAGGTGTCCTTGTGGTaGATGCAGCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDKVSLW*MQPPPR
Trigger: CCGCGGTGGCGGCTGCATCAACCACAAGGACACCTT...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAAAGGTGTCCTTGTGGTaGATGCAGCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQKVSLW*MQPPPR
Trigger: CCGCGGTGGCGGCTGCATCAACCACAAGGACACCTT...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGCCAGGTTCTCACCCTaGCCCTCCCGGCGCGTAGAC +
Preference number: 5 (lower is better)
Translates to: ESFQGGRTPGIADGESEVARFSP*PSRRVD
Trigger: GTCTACGCGCCGGGAGGGCAAGGGTGAGAACCTGGC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCAAAACTCGCAGCTCCCGGCAGTaGGAGGGCACATCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGSRHQCSRRVLQRTSKTRSSRQ*EGTSVK
Trigger: CTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCG...AGTTTTGCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAACGCAGCTCCCGGCAGTaGGAGGGCACATCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQRSSRQ*EGTSVK
Trigger: CTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCG...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGACAGCCGAGCGGACTTaGTCTCCCTCACACTTGATG +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVTAERT*SPSHLM
Trigger: CATCAAGTGTGAGGGAGACAAAGTCCGCTCGGCTGT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGACAAGTGACATCTTCTaGGCGCTCCTCGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVTSDIF*ALLGRQ
Trigger: CTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTGT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TGGGTTGGGCCTAGGACACGAGGGGCAAGAACGGAGCTTGGGGATGTGGCAGTTACAAGTGACATCTTCTaGGCGCTCCTCGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: WVGPRTRGARTELGDVAVTSDIF*ALLGRQ
Trigger: CTGTCTGCCGAGGAGCGCCAAGAAGATGTCACTTGT...AACTGCCACATCCCCAAGCTCCGTTCTTGCCCCTCGTGTCCTAGGCCCAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTGGAGAACACCAGGTATaGCTGATGGGGAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGGEHQV*LMGKVR
Trigger: CCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCC...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACCCCAGGCCCAGGTTCTaGAGGGGAAGTCCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: KSVEEWEKDPSILAPRLDPRPRF*RGSPGF
Trigger: AAAGCCGGGACTTCCCCTCAAGAACCTGGGCCTGGG...GTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTCTGGGATGACCTTTaGCCACAGCGACTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPVWDDL*PQRLPG
Trigger: TCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGAC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGTCTGGGATGACCTTTaGCCACAGCGACTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQVWDDL*PQRLPG
Trigger: TCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGAC...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCGCGCACCAAAACTCATaGCGGGAGTTGGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLAHQNS*RELEWQ
Trigger: CTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCGC...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CGGAGCTTGGGGATGTGGCAGTTCGTGTGTAAACAAGTGACATCTTCTTGGCGCAGTGCGTCTGCTGTGTaGCCTCCATCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RSLGMWQFVCKQVTSSWRSASAV*PPSRAW
Trigger: CCAGGCCCTGGATGGAGGCAACACAGCAGACGCACT...GCGCCAAGAAGATGTCACTTGTTTACACACGAACTGCCACATCCCCAAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: KGPQYPGSQARLRPSGDMLLVSS*AKSPSV
Trigger: GACCGAGGGTGACTTTGCCAACGATGAGACTAAGAG...CATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGGACATGCAGATGGTGGTGGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTTTGATCACGCGGCACTaGATGATGTCCGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: VGTCRWWWERSEPGRWAGLITRH*MMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAA...ACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCTTGATCACGCGGCACTaGATGATGTCCGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCLITRH*MMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAA...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPASSHV*WMLRWD
Trigger: ATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGC...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SPAYFPNSSLSRNPAGAKASSHV*WMLRWD
Trigger: ATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGC...CTTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAAAGGTGTCCTTGTGGTaGATGCAGCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKKVSLW*MQPPPR
Trigger: CCGCGGTGGCGGCTGCATCAACCACAAGGACACCTT...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CAA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGAAGGTGTCCTTGTGGTaGATGCAGCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGKVSLW*MQPPPR
Trigger: CCGCGGTGGCGGCTGCATCAACCACAAGGACACCTT...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGCCTGTTGGGGAGTCCTaGAGGCCAGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRPVGES*RPAAPR
Trigger: CCTGGGAGCTGCTGGCCTCAAGGACTCCCCAACAGG...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCCCTGTTGGGGAGTCCTaGAGGCCAGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ESFQGGRTPGIADGESEVPVGES*RPAAPR
Trigger: CCTGGGAGCTGCTGGCCTCAAGGACTCCCCAACAGG...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAATGCAGGGCCTGGAGGTaGTCCGGGTCAGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKCRAWR*SGSAFR
Trigger: CCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCA...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CAA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGACAGTGCCTGGCAGGTaGCTGGGCTGCCGGCTATTT +
Preference number: 5 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQTVPGR*LGCRLF
Trigger: AAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGT...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 90 bp GCTGTCACTGCCTTGATGGAGGCACTGATGAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCAAAGAGCTGGTTCCTCTTAGTCTCA +
Preference number: 5 (lower is better)
Translates to: AVTALMEALMRPPRL*TFNMRSKSWFLLVS
Trigger: TGAGACTAAGAGGAACCAGCTCTTTGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCTCATCAGTGCCTCCATCAAGGCAGTGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCGAATGGCCACTGTACTaGGGTCGCTTCCACCTGACG +
Preference number: 5 (lower is better)
Translates to: VTQQVSGRVGKGPQYPGSEWPLY*GRFHLT
Trigger: CGTCAGGTGGAAGCGACCCAAGTACAGTGGCCATTC...GGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456580.6
CDS-3UTR CAA 90 bp CACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAGCTGCTGTCACTGCCTaGATGGAGGCACTGATGAGG +
Preference number: 5 (lower is better)
Translates to: HSYPPCRSFPGPSYGPGPAAVTA*MEALMR
Trigger: CCTCATCAGTGCCTCCATCAAGGCAGTGACAGCAGC...TGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp AATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: NVTCIFSQFQPEQEPGRSASSHV*WMLRWD
Trigger: ATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGC...GCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAAAGGTGTCCTTGTGGTaGATGCAGCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQKVSLW*MQPPPR
Trigger: CCGCGGTGGCGGCTGCATCAACCACAAGGACACCTT...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR CAA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGAAGATGCCTTTCACATaGTACTCTGGTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGKMPFT*YSGVEV
Trigger: CACCTCCACACCAGAGTACAATGTGAAAGGCATCTT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp TCGGCAGACAGCAGGGCCTTAGGAAAATGTGCTCAATGGATAGAGTCCCTTAGCTGCAGGGCCTGGAGGTaGTCCGGGTCAGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: SADSRALGKCAQWIESLSCRAWR*SGSAFR
Trigger: CCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCA...GCTAAGGGACTCTATCCATTGAGCACATTTTCCTAAGGCCCTGCTGTCTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCGTCTGGGATGACCTTTaGCCACAGCGACTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: ESFQGGRTPGIADGESEVVWDDL*PQRLPG
Trigger: TCCCGGGAGTCGCTGTGGCAAAAGGTCATCCCAGAC...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAGCGCACCAAAACTCATaGCGGGAGTTGGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKAHQNS*RELEWQ
Trigger: CTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCGC...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CAA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGCGCACCAAAACTCATaGCGGGAGTTGGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGAHQNS*RELEWQ
Trigger: CTGCCACTCCAACTCCCGCAATGAGTTTTGGTGCGC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: HSKSVEEWEKDPSILAPRLLVSS*AKSPSV
Trigger: GACCGAGGGTGACTTTGCCAACGATGAGACTAAGAG...CCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: SGRVGKGPQYPGSQARLRLLVSS*AKSPSV
Trigger: GACCGAGGGTGACTTTGCCAACGATGAGACTAAGAG...CCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTGGGGCTGCTGTCACTGCCTaGATGGAGGCACTGATGAGG +
Preference number: 5 (lower is better)
Translates to: PFKVGEHQVLLMGKVRSGAAVTA*MEALMR
Trigger: CCTCATCAGTGCCTCCATCAAGGCAGTGACAGCAGC...CCCAGACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCATCCAACTTCTCTGACTaGAAGAAGGCCAGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: RSQVGHGTSAHEEFSRGPSNFSD*KKASRP
Trigger: CGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGA...TGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATG +
Preference number: 5 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQLRWDV*ITRHLM
Trigger: CATCAAGTGCCGCGTGATCAACACATCCCACCTGAG...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQASSHV*WMLRWD
Trigger: ATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGC...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR CAA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCGCAGCTCCCGGCAGTaGGAGGGCACATCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYRSSRQ*EGTSVK
Trigger: CTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCG...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGAAGATGCCTTTCACATaGTACTCTGGTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVKMPFT*YSGVEV
Trigger: CACCTCCACACCAGAGTACAATGTGAAAGGCATCTT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGGCAAGAACGGAGCTaGGGGATGTGGCAGTTCGTG +
Preference number: 5 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPGQERS*GMWQFV
Trigger: CACGAACTGCCACATCCCCAAGCTCCGTTCTTGCCC...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCGGAGAACACCAGGTATaGCTGATGGGGAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VSGRVGKGPQYPGSQARLGEHQV*LMGKVR
Trigger: CCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCC...GAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGACTGCACTTTTTCATTaGCTACACCTGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: VGKGPQYPGSQARLRPSGTALFH*LHLVWK
Trigger: CTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAGT...CCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFATNQQ*PTWPWC
Trigger: GCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGC...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp ACAAATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGGCTGCTGTCACTGCCTaGATGGAGGCACTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TNVTCIFSQFQPEQEPGRAAVTA*MEALMR
Trigger: CCTCATCAGTGCCTCCATCAAGGCAGTGACAGCAGC...CCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTCCAACTTCTCTGACTaGAAGAAGGCCAGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQSNFSD*KKASRP
Trigger: CGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGA...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCTCATCTTCTGGCTTCTaGACTTCGAAGATGTACTGT +
Preference number: 5 (lower is better)
Translates to: KDPSILAPRLDSGPVGTCSSSGF*TSKMYC
Trigger: ACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATGA...GCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp ACCTGGTCTGGAAGCCCGAGAAGGGCACAGCAGAGATCCCAAGTGGGTCACGGCTCATCTTCTGGCTTCTaGACTTCGAAGATGTACTGT +
Preference number: 5 (lower is better)
Translates to: TWSGSPRRAQQRSQVGHGSSSGF*TSKMYC
Trigger: ACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATGA...GCCGTGACCCACTTGGGATCTCTGCTGTGCCCTTCTCGGGCTTCCAGACCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTAGGGCCCCGCTTCACCTGGGGCCTCAAAGGTGTCGTTTATTCATTTGGCAAAACAGCCGAGCGGACTTaGTCTCCCTCACACTTGATG +
Preference number: 5 (lower is better)
Translates to: VGPRFTWGLKGVVYSFGKTAERT*SPSHLM
Trigger: CATCAAGTGTGAGGGAGACAAAGTCCGCTCGGCTGT...TTTGCCAAATGAATAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456580.6
ENST00000648180.1
CDS-3UTR CAA 90 bp ATCCCAAGTGGGTCACGGCACCAGTGCTCACGAAGAGTTCTCCAGAGGACCAGCGGTGGGGAGGACTATTaGAAATCTCAGCAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: IPSGSRHQCSRRVLQRTSGGEDY*KSQQGN
Trigger: GTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCACC...GCTGGTCCTCTGGAGAACTCTTCGTGAGCACTGGTGCCGTGACCCACTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGGGGACATGCAGAACTAAAAGGAACATTTaGGTCTGGGCAGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: DPSILAPRLDSGPVGTCRTKRNI*VWAGRR
Trigger: TCTTCTTCCTGCCCAGACCAAAATGTTCCTTTTAGT...TCTGCATGTCCCCACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CAA 90 bp CACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCATTGATCACGCGGCACTaGATGATGTCCGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: HTASQWKSGKRTPVSWLPLITRH*MMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAA...TGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGACAGCCGAGCGGACTTaGTCTCCCTCACACTTGATG +
Preference number: 5 (lower is better)
Translates to: RTLLSSLSFISWPLIWPRTAERT*SPSHLM
Trigger: CATCAAGTGTGAGGGAGACAAAGTCCGCTCGGCTGT...CCTGGGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GGGAAGTCCCGGCTTTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCTGCAGGGCCTGGAGGTaGTCCGGGTCAGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: GKSRLSRKNTLILLVVHFCRAWR*SGSAFR
Trigger: CCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCA...GAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAAAGCCGGGACTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GATTTATTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTGGTGGATCCTGACAGTGCCTGGCAGGTaGCTGGGCTGCCGGCTATTT +
Preference number: 5 (lower is better)
Translates to: DLLRIEQASCPLTLWWILTVPGR*LGCRLF
Trigger: AAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGT...CAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAATAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CAA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGCTGTGGAACCTGTTTTaGTCAGGGGGTGGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVLWNLF*SGGGRH
Trigger: ATGCCTGCCACCCCCTGACAAAAACAGGTTCCACAG...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPLLVSS*AKSPSV
Trigger: GACCGAGGGTGACTTTGCCAACGATGAGACTAAGAG...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AATGTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCTTGATCACGCGGCACTaGATGATGTCCGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: NVTCIFSQFQPEQEPGRSLITRH*MMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAA...GCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CTTCCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATG +
Preference number: 5 (lower is better)
Translates to: LPKVTQQVSGRVGKGPQYLRWDV*ITRHLM
Trigger: CATCAAGTGCCGCGTGATCAACACATCCCACCTGAG...ATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GTCGTTCATTTCCTGGCCCCTCATATGGCCCAGGGCCAAGACCCAGGAGCAAAGTCATCTTCTGGCTTCTaGACTTCGAAGATGTACTGT +
Preference number: 5 (lower is better)
Translates to: VVHFLAPHMAQGQDPGAKSSSGF*TSKMYC
Trigger: ACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATGA...CTTTGCTCCTGGGTCTTGGCCCTGGGCCATATGAGGGGCCAGGAAATGAACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp GTTAGCCTGAGGTGCAAGCTGGCTCACTTCACCCCCTACTCAGGAGCCTTGATTAAGATGCCTTTCACATaGTACTCTGGTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VSLRCKLAHFTPYSGALIKMPFT*YSGVEV
Trigger: CACCTCCACACCAGAGTACAATGTGAAAGGCATCTT...AATCAAGGCTCCTGAGTAGGGGGTGAAGTGAGCCAGCTTGCACCTCAGGCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CAA 90 bp GTCACCTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAAGGTGGGGAGGACTATTaGAAATCTCAGCAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: VTCIFSQFQPEQEPGRSQGGEDY*KSQQGN
Trigger: GTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCACC...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456580.6
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGGCTAGACTCAGGCCCAGTGAAGCAGTTAACCTCTTaGTGCTTCAGAATTCTCATC +
Preference number: 5 (lower is better)
Translates to: EWEKDPSILAPRLDSGPVKQLTS*CFRILI
Trigger: GATGAGAATTCTGAAGCACAAAGAGGTTAACTGCTT...CACTGGGCCTGAGTCTAGCCTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529629.5
CDS-3UTR CAA 90 bp CAAAACTGCATATTTTCCCAATTCCAGCCTGAGCAGGAACCCGGCAGGAGCCAATTGATCACGCGGCACTaGATGATGTCCGTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: QNCIFSQFQPEQEPGRSQLITRH*MMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAA...TTGGCTCCTGCCGGGTTCCTGCTCAGGCTGGAATTGGGAAAATATGCAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531028.2
CDS-3UTR CAA 90 bp GATTTATTGAGAATAGAACAGGCTTCCTGTCCCCTAACCCTGTGGTGGATCCTGACAGCCGAGCGGACTTaGTCTCCCTCACACTTGATG +
Preference number: 5 (lower is better)
Translates to: DLLRIEQASCPLTLWWILTAERT*SPSHLM
Trigger: CATCAAGTGTGAGGGAGACAAAGTCCGCTCGGCTGT...CAGGATCCACCACAGGGTTAGGGGACAGGAAGCCTGTTCTATTCTCAATAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS-3UTR CAA 90 bp ACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGCTCCCAGTCATCTTCTGGCTTCTaGACTTCGAAGATGTACTGT +
Preference number: 5 (lower is better)
Translates to: TQQVSGRVGKGPQYPGSQSSSGF*TSKMYC
Trigger: ACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATGA...CTGGGAGCCAGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GCCAAGAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAAGATGCCTTTCACATaGTACTCTGGTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AKSPFKVGEHQVLLMGKVKMPFT*YSGVEV
Trigger: CACCTCCACACCAGAGTACAATGTGAAAGGCATCTT...CACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGCAAGTCAGTGGAAGAGTGGGAAAAGGACCCCAGTATCCTGGTGGGGAGGACTATTaGAAATCTCAGCAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: PKVTQQVSGRVGKGPQYPGGEDY*KSQQGN
Trigger: GTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCACC...AGGATACTGGGGTCCTTTTCCCACTCTTCCACTGACTTGCTGTGTGACCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp GACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAGGGTGGGGAGGACTATTaGAAATCTCAGCAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: DSRIWSRKVRFPKGNPSKGGEDY*KSQQGN
Trigger: GTTTCCTTGCTGAGATTTCAAATAGTCCTCCCCACC...CTTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp AGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGCCGGAGAACACCAGGTATaGCTGATGGGGAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: RKNTLILLVVHFLAPHMAGEHQV*LMGKVR
Trigger: CCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCC...GGCCATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp TCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGCTCCTAGGCTGCATTTaGGGGGAATGTTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SRKNTLILLVVHFLAPHMLLGCI*GECWWG
Trigger: CCCCCACCAACATTCCCCCAAAATGCAGCCTAGGAG...CATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648180.1
CDS TCA 90 bp AGGCAAATCTATAATAACAGAAGCGGATTCGTGTTTGCCCAGGGCTaGAGGGAAGAGGTCAATGGGAATGGGTGGTGGTGGTTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: RQIYNNRSGFVFAQG*REEVNGNGWWWLKG
Trigger: TCCCTTTAACCACCACCACCCATTCCCATTGACCTCTTCCCTTCAGCCCTGGGCAAACACGAATCCGCTTCTGTTATTATAGATTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS-3UTR CAA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAAAGATGCCTTTCACATaGTACTCTGGTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RQQDLESESQVPKRKSQQKMPFT*YSGVEV
Trigger: CACCTCCACACCAGAGTACAATGTGAAAGGCATCTT...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp GCCTCCCCCTCACCACCATGGAAGGGACGATGGAATCCCTTTATATaGAATGTCCGGAACAGGCAAATCTATAATAACAGAAGCGGATTC +
Preference number: 5 (lower is better)
Translates to: ASPSPPWKGRWNPFI*NVRNRQIYNNRSGF
Trigger: GAATCCGCTTCTGTTATTATAGATTTGCCTGTTCCGGACATTTCATATAAAGGGATTCCATCGTCCCTTCCATGGTGGTGAGGGGGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS-3UTR CAA 90 bp GAGTCCTTTCAAGGTGGGAGAACACCAGGTATTGCTGATGGGGAAAGTGAGGTCTCATCTTCTGGCTTCTaGACTTCGAAGATGTACTGT +
Preference number: 5 (lower is better)
Translates to: ESFQGGRTPGIADGESEVSSSGF*TSKMYC
Trigger: ACAGTACATCTTCGAAGTCAAGAAGCCAGAAGATGA...GACCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCCCACCTTGAAAGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS-3UTR CAA 90 bp AGACAGCAGGATCTGGAGTCGGAAAGTCAGGTTCCCAAAAGGAAATCCCAGCAAACTGCACTTTTTCATTaGCTACACCTGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RQQDLESESQVPKRKSQQTALFH*LHLVWK
Trigger: CTTCCAGACCAGGTGTAGCAAATGAAAAAGTGCAGT...TTGCTGGGATTTCCTTTTGGGAACCTGACTTTCCGACTCCAGATCCTGCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS-3UTR CAA 90 bp TTCAAGAAAGAACACTCTTATCCTCCTTGTCGTTCATTTCCTGGCCCCTCATATGGAGAACACCAGGTATaGCTGATGGGGAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: FKKEHSYPPCRSFPGPSYGEHQV*LMGKVR
Trigger: CCTCACTTTCCCCATCAGCAATACCTGGTGTTCTCC...ATATGAGGGGCCAGGAAATGAACGACAAGGAGGATAAGAGTGTTCTTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531028.2
ENST00000648180.1
CDS TCA 90 bp ACATGGCAAAGTCACAACAATATGTCACAAGACACTAGCATGCAATaGATGTACCAGCACAAGAGTATAAACAAAGTGCCACGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: TWQSHNNMSQDTSMQ*MYQHKSINKVPRRG
Trigger: GCCACGCCGTGGCACTTTGTTTATACTCTTGTGCTGGTACATTCATTGCATGCTAGTGTCTTGTGACATATTGTTGTGACTTTGCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 90 bp GAATGGGTGGTGGTGGTTAAAGGGAGTGGGTTTCTTTTGGGGAGATaGAAATGTTCTACAGTTGATTGTGGTGATGGTTGCATAAACTCT +
Preference number: 5 (lower is better)
Translates to: EWVVVVKGSGFLLGR*KCSTVDCGDGCINS
Trigger: AGAGTTTATGCAACCATCACCACAATCAACTGTAGAACATTTTCATCTCCCCAAAAGAAACCCACTCCCTTTAACCACCACCACCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 72 bp GGCGGGGGTCCTCGCAGATGCCCAGGTCCCGGGCCCTaGGCGAGGAGGACGGACACCCTGAGCTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GGGPRRCPGPGP*ARRTDTLSSQA
Trigger: GGCCTGGGAGCTCAGGGTGTCCGTCCTCCTCGCTCAGGGCCCGGGACCTGGGCATCTGCGAGGACCCCCGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456580.6
CDS GCA 72 bp ATGCAGCCGCCACCGCGGTTCTGTCGCGGGTCCTCATaGAGCGTCCAGGCGCCATGCAGCCGGGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MQPPPRFCRGSS*SVQAPCSRASS
Trigger: GGAGGAGGCCCGGCTGCATGGCGCCTGGACGCTGCATGAGGACCCGCGACAGAACCGCGGTGGCGGCTGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp GCCCAGGCGCACCTTGCGCACATCAGTGACGGCGTATaGGTGGCCCTTTACCAGGCCGCACGCCAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: AQAHLAHISDGV*VALYQAARQAG
Trigger: GCCCGCCTGGCGTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp AGGCGCACCTTGCGCACATCAGTGACGGCGTATGCGTaGCCCTTTACCAGGCCGCACGCCAGGCGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RRTLRTSVTAYA*PFTRPHARRAS
Trigger: GGAGGCCCGCCTGGCGTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp CTGGCGGCCTTGTGCTGCAGGCTGTGCATGCGGTACTaGCGGTTCTCCTCCACCTGCAGGAGGCGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: LAALCCRLCMRY*RFSSTCRRREG
Trigger: CCCCTCCCGCCTCCTGCAGGTGGAGGAGAACCGCCAGTACCGCATGCACAGCCTGCAGCACAAGGCCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 72 bp GTAGGCCGTGGCCCAGGCGCACCTTGCGCACATCAGTaGCGGCGTATGCGTGGCCCTTTACCAGGCCGCACG +
Preference number: 6 (lower is better)
Translates to: VGRGPGAPCAHQ*RRMRGPLPGRT
Trigger: CGTGCGGCCTGGTAAAGGGCCACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCACGGCCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp GGGGGTCCTCGCAGATGCCCTTGGGTCGCTTCCACCTaGCGGCGGGCCCCGGCGTGCCCTTATAGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: GGPRRCPWVAST*RRAPACPYSRV
Trigger: CACTCTACTATAAGGGCACGCCGGGGCCCGCCGTCAGGTGGAAGCGACCCAAGGGCATCTGCGAGGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000533889.1
ENST00000648180.1
CDS CCA 72 bp CTGGGGGTAGCCACAGAGGGAGCTCCAGCAGGTGTGTaGGGGCTCATCCAGGCGCAGCTCCCGGCAGTTGGA +
Preference number: 6 (lower is better)
Translates to: LGVATEGAPAGV*GLIQAQLPAVG
Trigger: TCCAACTGCCGGGAGCTGCGCCTGGATGAGCCCCCACACACCTGCTGGAGCTCCCTCTGTGGCTACCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp GGCCTCAGGTTCCAGGCCAGGCGGTGCGGCCATAGGTaGCCCCACCTGGCTATGCTCAAGGATGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GLRFQARRCGHR*PHLAMLKDASS
Trigger: GGAGGAGGCATCCTTGAGCATAGCCAGGTGGGGTCACCTATGGCCGCACCGCCTGGCCTGGAACCTGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS GCA 72 bp TTCTGTCGCGGGTCCTCATGCAGCGTCCAGGCGCCATaGAGCCGGGCCTCCTCCCACGTCTTGTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: FCRGSSCSVQAP*SRASSHVLWML
Trigger: GAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCTGCATGAGGACCCGCGACAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp TCCAGGCCAGGCGGTGCGGCCATAGGTGACCCCACCTaGCTATGCTCAAGGATGCCTCCTCCTGGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: SRPGGAAIGDPT*LCSRMPPPGAQ
Trigger: CTGGGCACCAGGAGGAGGCATCCTTGAGCATAGCCAGGTGGGGTCACCTATGGCCGCACCGCCTGGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 72 bp GCCCTCGGGCTGGTCGGTGCGCAGGAAGACGCTGCGTaGGTTGATGTAGATGGAGCTGGCGGCCTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: ALGLVGAQEDAA*VDVDGAGGLVL
Trigger: CAGCACAAGGCCGCCAGCTCCATCTACATCAACTCACGCAGCGTCTTCCTGCGCACCGACCAGCCCGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp CCAGGCGCAGCTCCCGGCAGTTGGAGGGCACATCAGTaGAGACTCGGAGCAGGAACTCGCCAGTGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PGAAPGSWRAHQ*RLGAGTRQCGL
Trigger: CAGGCCACACTGGCGAGTTCCTGCTCCGAGTCTTCACTGATGTGCCCTCCAACTGCCGGGAGCTGCGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp GGCTGCCGGCTATTTCGGTCCCGGAGGTGGAGGGTATaGAGGGCCTGGAGGTTGTCCGGGTCAGCCTTTAGG +
Preference number: 6 (lower is better)
Translates to: GCRLFRSRRWRV*RAWRLSGSAFR
Trigger: CCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAATAGCCGGCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp AGGATGCCTCCTCCTGGTGCCCAGCAAGGCCTCCAATaGAGGAAGGCTAAGGGGCTGCAAGGGGCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: RMPPPGAQQGLQ*RKAKGLQGALR
Trigger: CCTCAGGGCCCCTTGCAGCCCCTTAGCCTTCCTGCATTGGAGGCCTTGCTGGGCACCAGGAGGAGGCATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CCA 72 bp CAGGCGCCATGCAGCCGGGCCTCCTCCCACGTCTTGTaGATGCTCAGGTGGGATGTGTTGATCACGCGGCAC +
Preference number: 6 (lower is better)
Translates to: QAPCSRASSHVL*MLRWDVLITRH
Trigger: GTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp GGAGGTGCTGCTGAGAATGTGCACGGCCACAGTGCCTaGCAGGTTGCTGGGCTGCCGGCTATTTCGGTCCCG +
Preference number: 6 (lower is better)
Translates to: GGAAENVHGHSA*QVAGLPAISVP
Trigger: CGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCACCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 72 bp GTCCAGGCGCCATGCAGCCGGGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGATGTGTTGATCACGCGG +
Preference number: 6 (lower is better)
Translates to: VQAPCSRASSHV*WMLRWDVLITR
Trigger: CCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 72 bp CTGCTGAGAATGTGCACGGCCACAGTGCCTGGCAGGTaGCTGGGCTGCCGGCTATTTCGGTCCCGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LLRMCTATVPGR*LGCRLFRSRRW
Trigger: CCACCTCCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGTGGCCGTGCACATTCTCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 90 bp AGGGAGGTGCTGCTGAGAATGTGCACGGCCACAGTGCCTGGCAGGTaGCTGGGCTGCCGGCTATTTCGGTCCCGGAGGTGGAGGGTATGC +
Preference number: 6 (lower is better)
Translates to: REVLLRMCTATVPGR*LGCRLFRSRRWRVC
Trigger: GCATACCCTCCACCTCCGGGACCGAAATAGCCGGCAGCCCAGCAACCTGCCAGGCACTGTGGCCGTGCACATTCTCAGCAGCACCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp CCAGCGAATGGCCACTGTACTTGGGTCGCTTCCACCTaGCGGCGGGCCCCGGCGTGCCCTTATAGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: PANGHCTWVAST*RRAPACPYSRV
Trigger: CACTCTACTATAAGGGCACGCCGGGGCCCGCCGTCAGGTGGAAGCGACCCAAGTACAGTGGCCATTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456580.6
CDS GCA 72 bp GTGCTGACAGCAGGTAGATACAGCTGGGCGTCCCTGTaGAGGACATTCTCTCTCACCCGGGGTGGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: VLTAGRYSWASL*RTFSLTRGGVG
Trigger: CCCCACCCCACCCCGGGTGAGAGAGAATGTCCTGCACAGGGACGCCCAGCTGTATCTACCTGCTGTCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527066.5
CDS CAA 90 bp TCGCCCCAGGGGTTGCGCAGGCGGATCATGTCCAACTTCTCTGACTaGAAGAAGGCCAGTAGGCCGTGGCCCAGGCGCACCTTGCGCACA +
Preference number: 6 (lower is better)
Translates to: SPQGLRRRIMSNFSD*KKASRPWPRRTLRT
Trigger: TGTGCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGACATGATCCGCCTGCGCAACCCCTGGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 90 bp TTCTCTGACTTGAAGAAGGCCAGTAGGCCGTGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCGTATGCGTGGCCCTTTACCAGGCCG +
Preference number: 6 (lower is better)
Translates to: FSDLKKASRPWPRRT*RTSVTAYAWPFTRP
Trigger: CGGCCTGGTAAAGGGCCACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAAGTCAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 90 bp TCACCGTCGTCCTGCACGGTCACACCCATCTTCTCCCGCTCACTCTaGCTCACTTTCTGCCACTCCTCCGAGGTGTCACTCCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: SPSSCTVTPIFSRSL*LTFCHSSEVSLQGP
Trigger: CGGGCCCTGGAGTGACACCTCGGAGGAGTGGCAGAAAGTGAGCAAGAGTGAGCGGGAGAAGATGGGTGTGACCGTGCAGGACGACGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS CAA 90 bp TCATGCAGCGTCCAGGCGCCATGCAGCCGGGCCTCCTCCCACGTCTaGTGGATGCTCAGGTGGGATGTGTTGATCACGCGGCACTTGATG +
Preference number: 6 (lower is better)
Translates to: SCSVQAPCSRASSHV*WMLRWDVLITRHLM
Trigger: CATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCTGCATGGCGCCTGGACGCTGCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp GAGCACCTTCCTGCGCCGGCAGTCCCGCCTCAGGGCTaGGTAGTTCTGGTCCTCATAGGGCTTCACACACGA +
Preference number: 6 (lower is better)
Translates to: EHLPAPAVPPQG*VVLVLIGLHTR
Trigger: TCGTGTGTGAAGCCCTATGAGGACCAGAACTACTCAGCCCTGAGGCGGGACTGCCGGCGCAGGAAGGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS GCA 72 bp CCCTTGCCCTCCCGGCGCGTAGACCGCTTTGGCCGCTaGTGGATGCAGATCAGGACTTCATCTTCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: PLPSRRVDRFGR*WMQIRTSSSGF
Trigger: GAAGCCAGAAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGCCGGGAGGGCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp CAGGCTGCCACAAACCAGCAGTTGCCCACCTGGCCCTaGTGCAGGTCGTGGGAGCTGATGCCATCCACAAAG +
Preference number: 6 (lower is better)
Translates to: QAATNQQLPTWP*CRSWELMPSTK
Trigger: CTTTGTGGATGGCATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527066.5
ENST00000529629.5
ENST00000531028.2
ENST00000533889.1
ENST00000648180.1
CDS CCA 72 bp CTATTTCGGTCCCGGAGGTGGAGGGTATGCAGGGCCTaGAGGTTGTCCGGGTCAGCCTTTAGGTGCACCTGG +
Preference number: 6 (lower is better)
Translates to: LFRSRRWRVCRA*RLSGSAFRCTW
Trigger: CCAGGTGCACCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp CTAGACTCAGGCCCAGTGGGGACATGCAGATGGTGGTaGGAACGGTCAGAGCCAGGTAGGTGGGCAGGTGTC +
Preference number: 6 (lower is better)
Translates to: LDSGPVGTCRWW*ERSEPGRWAGV
Trigger: GACACCTGCCCACCTACCTGGCTCTGACCGTTCCCACCACCATCTGCATGTCCCCACTGGGCCTGAGTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 72 bp TTGAAGAAGGCCAGTAGGCCGTGGCCCAGGCGCACCTaGCGCACATCAGTGACGGCGTATGCGTGGCCCTTT +
Preference number: 6 (lower is better)
Translates to: LKKASRPWPRRT*RTSVTAYAWPF
Trigger: AAAGGGCCACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 90 bp CGGCTATTTCGGTCCCGGAGGTGGAGGGTATGCAGGGCCTGGAGGTaGTCCGGGTCAGCCTTTAGGTGCACCTGGCCCAGAAATTCATCC +
Preference number: 6 (lower is better)
Translates to: RLFRSRRWRVCRAWR*SGSAFRCTWPRNSS
Trigger: GGATGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCATACCCTCCACCTCCGGGACCGAAATAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp GATGACCTTTTGCCACAGCGACTCCCGGGAGGCAAGTaGCGAGCAGGCTGCCACAAACCAGCAGTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: DDLLPQRLPGGK*RAGCHKPAVAH
Trigger: GTGGGCAACTGCTGGTTTGTGGCAGCCTGCTCGTCACTTGCCTCCCGGGAGTCGCTGTGGCAAAAGGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000533889.1
ENST00000648180.1
CDS TCA 72 bp GGTTGCGCAGGCGGATCATGTCCAACTTCTCTGACTTaGAGAAGGCCAGTAGGCCGTGGCCCAGGCGCACCT +
Preference number: 6 (lower is better)
Translates to: GCAGGSCPTSLT*RRPVGRGPGAP
Trigger: AGGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGACATGATCCGCCTGCGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp TCCAACTTCTCTGACTTGAAGAAGGCCAGTAGGCCGTaGCCCAGGCGCACCTTGCGCACATCAGTGACGGCG +
Preference number: 6 (lower is better)
Translates to: SNFSDLKKASRP*PRRTLRTSVTA
Trigger: CGCCGTCACTGATGTGCGCAAGGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAAGTCAGAGAAGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 90 bp AGCCGGGCCTCCTCCCACGTCTTGTGGATGCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATGATGTCCGTGAAGTACCGGCACACG +
Preference number: 6 (lower is better)
Translates to: SRASSHVLWMLRWDV*ITRHLMMSVKYRHT
Trigger: CGTGTGCCGGTACTTCACGGACATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp CTCAGAAACACCACCCGTGAAGTCCACCAGTGCGTCTaGTGTGTTGCCTCCATCCAGGGCCTGGTAACAGCC +
Preference number: 6 (lower is better)
Translates to: LRNTTREVHQCV*CVASIQGLVTA
Trigger: GGCTGTTACCAGGCCCTGGATGGAGGCAACACAGCAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp GATGGGCTCAGAAACACCACCCGTGAAGTCCACCAGTaGGTCTGCTGTGTTGCCTCCATCCAGGGCCTGGTA +
Preference number: 6 (lower is better)
Translates to: DGLRNTTREVHQ*VCCVASIQGLV
Trigger: TACCAGGCCCTGGATGGAGGCAACACAGCAGACGCACTGGTGGACTTCACGGGTGGTGTTTCTGAGCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp GCCTTGATGGAGGCACTGATGAGGCCGCCCCGGCTGTaGACCTTTAACATGCGCTCAAAGAGCTGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: ALMEALMRPPRL*TFNMRSKSWFL
Trigger: GAGGAACCAGCTCTTTGAGCGCATGTTAAAGGTGCACAGCCGGGGCGGCCTCATCAGTGCCTCCATCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp TGCAGGGCCTGGAGGTTGTCCGGGTCAGCCTTTAGGTaGACCTGGCCCAGAAATTCATCCTTCAGCACTCGG +
Preference number: 6 (lower is better)
Translates to: CRAWRLSGSAFR*TWPRNSSFSTR
Trigger: CCGAGTGCTGAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCCGGACAACCTCCAGGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp AGCCGGGCCTCCTCCCACGTCTTGTGGATGCTCAGGTaGGATGTGTTGATCACGCGGCACTTGATGATGTCC +
Preference number: 6 (lower is better)
Translates to: SRASSHVLWMLR*DVLITRHLMMS
Trigger: GGACATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGAGGCCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp TTGCCCTCCCGGCGCGTAGACCGCTTTGGCCGCTGCTaGATGCAGATCAGGACTTCATCTTCTGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LPSRRVDRFGRC*MQIRTSSSGFL
Trigger: CAAGAAGCCAGAAGATGAAGTCCTGATCTGCATCCAGCAGCGGCCAAAGCGGTCTACGCGCCGGGAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp ACATGGGGTCCCGCCATGCTGACTGTCACCACACACTaGGCATCACAACACGTGGAAGGCCTCAGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: TWGPAMLTVTTH*ASQHVEGLRFQ
Trigger: CTGGAACCTGAGGCCTTCCACGTGTTGTGATGCCCAGTGTGTGGTGACAGTCAGCATGGCGGGACCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CAA 90 bp ACTTCGAAGATGTACTGTGGGTTCTGGAAGAAGGTGTCCTTGTGGTaGATGCAGCCGCCACCGCGGTTCTGTCGCGGGTCCTCATGCAGC +
Preference number: 6 (lower is better)
Translates to: TSKMYCGFWKKVSLW*MQPPPRFCRGSSCS
Trigger: GCTGCATGAGGACCCGCGACAGAACCGCGGTGGCGGCTGCATCAACCACAAGGACACCTTCTTCCAGAACCCACAGTACATCTTCGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp ACGTCCTCGAAGGTCATCCAGAACTCACCGTCGTCCTaGACGGTCACACCCATCTTCTCCCGCTCACTCTTG +
Preference number: 6 (lower is better)
Translates to: TSSKVIQNSPSS*TVTPIFSRSLL
Trigger: CAAGAGTGAGCGGGAGAAGATGGGTGTGACCGTGCAGGACGACGGTGAGTTCTGGATGACCTTCGAGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
CDS GCA 72 bp CATCAGATGCCAAGGACTCAGCATGTACCCAGCCTCTaGAGGGCCCGGTGGCTTCATTCCGTTCTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: HQMPRTQHVPSL*RARWLHSVLKV
Trigger: GACCTTGAGAACGGAATGAAGCCACCGGGCCCTGCAGAGGCTGGGTACATGCTGAGTCCTTGGCATCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CCA 72 bp GCCTGGAGGTTGTCCGGGTCAGCCTTTAGGTGCACCTaGCCCAGAAATTCATCCTTCAGCACTCGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: AWRLSGSAFRCT*PRNSSFSTRWF
Trigger: GAACCACCGAGTGCTGAAGGATGAATTTCTGGGCCAGGTGCACCTAAAGGCTGACCCGGACAACCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp CCTGCAGAGAAAGTGCTGACAGCAGGTAGATACAGCTaGGCGTCCCTGTGCAGGACATTCTCTCTCACCCGG +
Preference number: 6 (lower is better)
Translates to: PAEKVLTAGRYS*ASLCRTFSLTR
Trigger: CCGGGTGAGAGAGAATGTCCTGCACAGGGACGCCCAGCTGTATCTACCTGCTGTCAGCACTTTCTCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527066.5
CDS CCA 72 bp GTGGCTTCATTCCGTTCTCAAGGTCTGACAGGCACATaGGGTCCCGCCATGCTGACTGTCACCACACACTGG +
Preference number: 6 (lower is better)
Translates to: VASFRSQGLTGT*GPAMLTVTTHW
Trigger: CCAGTGTGTGGTGACAGTCAGCATGGCGGGACCCCATGTGCCTGTCAGACCTTGAGAACGGAATGAAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CAA 72 bp TGGATGCTCAGGTGGGATGTGTTGATCACGCGGCACTaGATGATGTCCGTGAAGTACCGGCACACGTCCTCG +
Preference number: 6 (lower is better)
Translates to: WMLRWDVLITRH*MMSVKYRHTSS
Trigger: CGAGGACGTGTGCCGGTACTTCACGGACATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 90 bp CACGTCTTGTGGATGCTCAGGTGGGATGTGTTGATCACGCGGCACTaGATGATGTCCGTGAAGTACCGGCACACGTCCTCGAAGGTCATC +
Preference number: 6 (lower is better)
Translates to: HVLWMLRWDVLITRH*MMSVKYRHTSSKVI
Trigger: GATGACCTTCGAGGACGTGTGCCGGTACTTCACGGACATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp CCTTTCACATTGTACTCTGGTGTGGAGGTGCCCTTCTaGACAGCCGAGCGGACTTTGTCTCCCTCACACTTG +
Preference number: 6 (lower is better)
Translates to: PFTLYSGVEVPF*TAERTLSPSHL
Trigger: CAAGTGTGAGGGAGACAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGTACAATGTGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS GCA 72 bp AGAAGATGCCTTTCACATTGTACTCTGGTGTGGAGGTaGCCTTCTGCACAGCCGAGCGGACTTTGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: RRCLSHCTLVWR*PSAQPSGLCLP
Trigger: AGGGAGACAAAGTCCGCTCGGCTGTGCAGAAGGGCACCTCCACACCAGAGTACAATGTGAAAGGCATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000456580.6
ENST00000527129.1
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 72 bp ATGCGCTCAAAGAGCTGGTTCCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTCAGGTCGATGGGCTCA +
Preference number: 6 (lower is better)
Translates to: MRSKSWFLLVSS*AKSPSVRSMGS
Trigger: TGAGCCCATCGACCTGACCGAGGGTGACTTTGCCAACGATGAGACTAAGAGGAACCAGCTCTTTGAGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CAA 72 bp TCCTCCCACGTCTTGTGGATGCTCAGGTGGGATGTGTaGATCACGCGGCACTTGATGATGTCCGTGAAGTAC +
Preference number: 6 (lower is better)
Translates to: SSHVLWMLRWDV*ITRHLMMSVKY
Trigger: GTACTTCACGGACATCATCAAGTGCCGCGTGATCAACACATCCCACCTGAGCATCCACAAGACGTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS CCA 72 bp GTACCAGCACAAGAGTATAAACAAAGTGCCACGGCGTaGCCAGGCACATCAGATGCCAAGGACTCAGCATGT +
Preference number: 6 (lower is better)
Translates to: VPAQEYKQSATA*PGTSDAKDSAC
Trigger: ACATGCTGAGTCCTTGGCATCTGATGTGCCTGGCCACGCCGTGGCACTTTGTTTATACTCTTGTGCTGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CCA 72 bp GTTTGCCCAGGGCTGAAGGGAAGAGGTCAATGGGAATaGGTGGTGGTGGTTAAAGGGAGTGGGTTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: VCPGLKGRGQWE*VVVVKGSGFLL
Trigger: CAAAAGAAACCCACTCCCTTTAACCACCACCACCCATTCCCATTGACCTCTTCCCTTCAGCCCTGGGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CCA 72 bp ATTCGTGTTTGCCCAGGGCTGAAGGGAAGAGGTCAATaGGAATGGGTGGTGGTGGTTAAAGGGAGTGGGTTT +
Preference number: 6 (lower is better)
Translates to: IRVCPGLKGRGQ*EWVVVVKGSGF
Trigger: AAACCCACTCCCTTTAACCACCACCACCCATTCCCATTGACCTCTTCCCTTCAGCCCTGGGCAAACACGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CAA 90 bp ACCTTTAACATGCGCTCAAAGAGCTGGTTCCTCTTAGTCTCATCGTaGGCAAAGTCACCCTCGGTCAGGTCGATGGGCTCAGAAACACCA +
Preference number: 6 (lower is better)
Translates to: TFNMRSKSWFLLVSS*AKSPSVRSMGSETP
Trigger: TGGTGTTTCTGAGCCCATCGACCTGACCGAGGGTGACTTTGCCAACGATGAGACTAAGAGGAACCAGCTCTTTGAGCGCATGTTAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456580.6
ENST00000529629.5
ENST00000531028.2
ENST00000648180.1
ENST00000648752.1
CDS TCA 72 bp TATAATAACAGAAGCGGATTCGTGTTTGCCCAGGGCTaGAGGGAAGAGGTCAATGGGAATGGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: YNNRSGFVFAQG*REEVNGNGWWW
Trigger: CCACCACCACCCATTCCCATTGACCTCTTCCCTTCAGCCCTGGGCAAACACGAATCCGCTTCTGTTATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS CAA 72 bp ACAGGCAAATCTATAATAACAGAAGCGGATTCGTGTTaGCCCAGGGCTGAAGGGAAGAGGTCAATGGGAATG +
Preference number: 6 (lower is better)
Translates to: TGKSIITEADSC*PRAEGKRSMGM
Trigger: CATTCCCATTGACCTCTTCCCTTCAGCCCTGGGCAAACACGAATCCGCTTCTGTTATTATAGATTTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 72 bp TCACCACCATGGAAGGGACGATGGAATCCCTTTATATaGAATGTCCGGAACAGGCAAATCTATAATAACAGA +
Preference number: 6 (lower is better)
Translates to: SPPWKGRWNPFI*NVRNRQIYNNR
Trigger: TCTGTTATTATAGATTTGCCTGTTCCGGACATTTCATATAAAGGGATTCCATCGTCCCTTCCATGGTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1
CDS TCA 72 bp AGTCACAACAATATGTCACAAGACACTAGCATGCAATaGATGTACCAGCACAAGAGTATAAACAAAGTGCCA +
Preference number: 6 (lower is better)
Translates to: SHNNMSQDTSMQ*MYQHKSINKVP
Trigger: TGGCACTTTGTTTATACTCTTGTGCTGGTACATTCATTGCATGCTAGTGTCTTGTGACATATTGTTGTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527129.1