RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162909

Ensembl transcript IDs: ENST00000295006.6, ENST00000433674.6, ENST00000463997.1, ENST00000472601.5, ENST00000474026.5, ENST00000480581.1, ENST00000483579.1, ENST00000487223.5, ENST00000492565.1, ENST00000492664.5, ENST00000498027.5

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAGCGACAGAGGTGAGTCTTCTCTCCTGGACTCTCCAGATGCCTTaGCAAGATTACTTCATGATATACCATGTTTCCCAGTTGGCTCAT +
Preference number: 1 (lower is better)
Translates to: QATEVSLLSWTLQMP*QDYFMIYHVSQLAH
Trigger: ATGAGCCAACTGGGAAACATGGTATATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGGAGAGAAGACTCACCTCTGTCGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR TCA 90 bp CTTGAAGTTGCTTTAAATATTCCCTGCCAAGGGCCTCGTGTCCTTTaGGAGCGACTCAATGTTTTTGCTCAGCTGTTAAATACCTCCCTG +
Preference number: 1 (lower is better)
Translates to: LEVALNIPCQGPRVL*ERLNVFAQLLNTSL
Trigger: CAGGGAGGTATTTAACAGCTGAGCAAAAACATTGAGTCGCTCTCAAAGGACACGAGGCCCTTGGCAGGGAATATTTAAAGCAACTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR TCA 90 bp GTCTTCTCTCCTGGACTCTCCAGATGCCTTGACAAGATTACTTCATaGTATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTT +
Preference number: 1 (lower is better)
Translates to: VFSPGLSRCLDKITS*YTMFPSWLMGNGNL
Trigger: AAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGGAGAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CCA 90 bp TTGACAAGATTACTTCATGATATACCATGTTTCCCAGTTGGCTCATaGGAAATGGTAATCTTGGACTGTTGTTTGGTAGAATCAACAGCT +
Preference number: 1 (lower is better)
Translates to: LTRLLHDIPCFPVGS*EMVILDCCLVESTA
Trigger: AGCTGTTGATTCTACCAAACAACAGTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAGTAATCTTGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CCA 90 bp TTTGAGGTCCAGATACAAAGTGTATTTCTATGGAAGCTTAGTCCTTaGCTGATTTTCCATCATGAGAAGTCTTCAGGCAGATTAGTTATA +
Preference number: 1 (lower is better)
Translates to: FEVQIQSVFLWKLSP*LIFHHEKSSGRLVI
Trigger: TATAACTAATCTGCCTGAAGACTTCTCATGATGGAAAATCAGCCAAGGACTAAGCTTCCATAGAAATACACTTTGTATCTGGACCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CCA 90 bp AAATGTTCCCATAATTTTGAGGTCCAGATACAAAGTGTATTTCTATaGAAGCTTAGTCCTTGGCTGATTTTCCATCATGAGAAGTCTTCA +
Preference number: 1 (lower is better)
Translates to: KCSHNFEVQIQSVFL*KLSPWLIFHHEKSS
Trigger: TGAAGACTTCTCATGATGGAAAATCAGCCAAGGACTAAGCTTCCATAGAAATACACTTTGTATCTGGACCTCAAAATTATGGGAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCCAAGCGACAGAGGTaGGTCTTCTCTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPKRQR*VFSPGL
Trigger: GAGTCCAGGAGAGAAGACTCACCTCTGTCGCTTGGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCTGGACTCTCCAGATaGCTTGACAAGATTACTTCA +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPGLSR*LDKITS
Trigger: TGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTTGGATGCCTGGTTTTaGCATACTGGTTCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMLDAWF*HTGSVD
Trigger: ATCAACTGAACCAGTATGCCAAAACCAGGCATCCAA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTACAAATTGGATGCCTaGTTTTGGCATACTGGTTCA +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMYKLDA*FWHTGS
Trigger: TGAACCAGTATGCCAAAACCAGGCATCCAATTTGTA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGACAAGATTACTTCATaGTATACCATGTTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMDKITS*YTMFPS
Trigger: ACTGGGAAACATGGTATATCATGAAGTAATCTTGTC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CAA 90 bp CCAAGCGACAGAGGTGAGTCTTCTCTCCTGGACTCTCCAGATGCCTaGACAAGATTACTTCATGATATACCATGTTTCCCAGTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: PSDRGESSLLDSPDA*TRLLHDIPCFPVGS
Trigger: TGAGCCAACTGGGAAACATGGTATATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGGAGAGAAGACTCACCTCTGTCGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGAATTGGTTTACAAATTaGATGCCTGGTTTTGGCATA +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMNWFTN*MPGFGI
Trigger: TATGCCAAAACCAGGCATCCAATTTGTAAACCAATT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCATAAAGTTTTGAGGTaGCAAACAGCTTATTTTGTC +
Preference number: 2 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMHKVLR*QTAYFV
Trigger: GACAAAATAAGCTGTTTGCCACCTCAAAACTTTATG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGGGCCTCGTGTCCTTTaGGAGCGACTCAATGTTTTT +
Preference number: 2 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDGPRVL*ERLNVF
Trigger: AAAAACATTGAGTCGCTCTCAAAGGACACGAGGCCC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTGGAAGCTTAGTCCTTaGCTGATTTTCCATCATGAG +
Preference number: 2 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQWKLSP*LIFHHE
Trigger: CTCATGATGGAAAATCAGCCAAGGACTAAGCTTCCA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGCTGATTTTCCATCATaGGAAGTCTTCAGGCAGATT +
Preference number: 2 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDADFPS*EVFRQI
Trigger: AATCTGCCTGAAGACTTCTCATGATGGAAAATCAGC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGACTCTCCAGATGCCTTaGCAAGATTACTTCATGATA +
Preference number: 2 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQTLQMP*QDYFMI
Trigger: TATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCAAAGTGTATTTCTATaGAAGCTTAGTCCTTGGCTG +
Preference number: 2 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQQSVFL*KLSPWL
Trigger: CAGCCAAGGACTAAGCTTCCATAGAAATACACTTTG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGGGCCTCGTGTCCTTTaGGAGCGACTCAATGTTTTT +
Preference number: 2 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSGPRVL*ERLNVF
Trigger: AAAAACATTGAGTCGCTCTCAAAGGACACGAGGCCC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCAAAGTGTATTTCTATaGAAGCTTAGTCCTTGGCTG +
Preference number: 2 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDQSVFL*KLSPWL
Trigger: CAGCCAAGGACTAAGCTTCCATAGAAATACACTTTG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CAA 90 bp ACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTGTaGTTTGGTAGAATCAACAGCTGCATTTTAAACTTGAAGTTGCTT +
Preference number: 2 (lower is better)
Translates to: TMFPSWLMGNGNLGL*FGRINSCILNLKLL
Trigger: AAGCAACTTCAAGTTTAAAATGCAGCTGTTGATTCTACCAAACAACAGTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCCTGGACTCTCCAGATaGCTTGACAAGATTACTTCA +
Preference number: 2 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSPGLSR*LDKITS
Trigger: TGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTTCCCAGTTGGCTCATaGGAAATGGTAATCTTGGAC +
Preference number: 2 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSFPVGS*EMVILD
Trigger: GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGGAAGCTTAGTCCTTaGCTGATTTTCCATCATGAG +
Preference number: 2 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSWKLSP*LIFHHE
Trigger: CTCATGATGGAAAATCAGCCAAGGACTAAGCTTCCA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CAA 90 bp GGTCTTTGTAAGACCAGATGTATAAGGCCGAATAGGGTCAAGAACTaGATTGTAAGGAGAACGATTTACTATTACCAATCAATATTCTAC +
Preference number: 2 (lower is better)
Translates to: GLCKTRCIRPNRVKN*IVRRTIYYYQSIFY
Trigger: GTAGAATATTGATTGGTAATAGTAAATCGTTCTCCTTACAATCAAGTTCTTGACCCTATTCGGCCTTATACATCTGGTCTTACAAAGACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGACAAGATTACTTCATaGTATACCATGTTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSDKITS*YTMFPS
Trigger: ACTGGGAAACATGGTATATCATGAAGTAATCTTGTC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGAGGGCCTCGTGTCCTTaGAGAGCGACTCAATGTTTT +
Preference number: 3 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMRASCP*RATQCF
Trigger: AAAACATTGAGTCGCTCTCAAAGGACACGAGGCCCT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTACAAAACCTGTCTCTaGTTTAACCCAAGCGACAGA +
Preference number: 3 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMYKTCL*FNPSDR
Trigger: TCTGTCGCTTGGGTTAAACAAGAGACAGGTTTTGTA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGATTTAAAGCTTTCTTaGACCTTGTCAAGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMDLKLS*TLSRVK
Trigger: CTTAACCCTTGACAAGGTCAAAGAAAGCTTTAAATC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR TCA 72 bp GAGGTGAGTCTTCTCTCCTGGACTCTCCAGATGCCTTaGCAAGATTACTTCATGATATACCATGTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: EVSLLSWTLQMP*QDYFMIYHVSQ
Trigger: CTGGGAAACATGGTATATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGGAGAGAAGACTCACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGATCTTGGACTGTTGTTaGGTAGAATCAACAGCTGCA +
Preference number: 3 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQILDCC*VESTAA
Trigger: TGCAGCTGTTGATTCTACCAAACAACAGTCCAAGAT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTGGGAAATGGTAATCTaGGACTGTTGTTTGGTAGAA +
Preference number: 3 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQWEMVI*DCCLVE
Trigger: TTCTACCAAACAACAGTCCAAGATTACCATTTCCCA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTAGGGCCTCGTGTCCTTaGAGAGCGACTCAATGTTTT +
Preference number: 3 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSRASCP*RATQCF
Trigger: AAAACATTGAGTCGCTCTCAAAGGACACGAGGCCCT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CCA 72 bp TTACTTCATGATATACCATGTTTCCCAGTTGGCTCATaGGAAATGGTAATCTTGGACTGTTGTTTGGTAGAA +
Preference number: 3 (lower is better)
Translates to: LLHDIPCFPVGS*EMVILDCCLVE
Trigger: TTCTACCAAACAACAGTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGGTAATCTTGGACTGTaGTTTGGTAGAATCAACAGC +
Preference number: 3 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSGNLGL*FGRINS
Trigger: GCTGTTGATTCTACCAAACAACAGTCCAAGATTACC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGATTTAAAGCTTTCTTaGACCTTGTCAAGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSDLKLS*TLSRVK
Trigger: CTTAACCCTTGACAAGGTCAAAGAAAGCTTTAAATC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCTCCTCGGCTCCGGTaGCCGAGTACGCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPPRLR*PSTRAP
Trigger: AGGGGCACGCGTACTCGGTCACCGGAGCCGAGGAGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGGTCCTTCGCCAGCTTaGCCGCGATGCCCGCCATGC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMGPSPA*PRCPPC
Trigger: GCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTGCAACCTCCCGCGGTaGAGCCCCGCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMCNLPR*SPASSS
Trigger: GGAACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGCCCCACCAGGAAGGTaGAGCCGCTCTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMAPPGR*SRSPHP
Trigger: AGGATGGGGAGAGCGGCTGCACCTTCCTGGTGGGGC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCGCCGTCGGTGCTTCTaGATGAGCCCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMRRRCF*MSPTRK
Trigger: CTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGCTCCCCGTCCTTGGTaGGCAGCCTGTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMAPRPW*AACHPP
Trigger: TGGTGGATGACAGGCTGCCCACCAAGGACGGGGAGC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGGCGCTTCCACTCGATaGCCCGGGTTTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMGASTR*PGFCWS
Trigger: ACTCCAGCAAAACCCGGGGCATCGAGTGGAAGCGCC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCGAAGCCCTCAGTGGTaGCACCCCCTGATAGCGCTT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMRSPQW*HPLIAL
Trigger: AAGCGCTATCAGGGGGTGCCACCACTGAGGGCTTCG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCTCGCTCCCTTCGGCTaGATGCACAAAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMLAPFG*MHKEQL
Trigger: GAGCTGCTCTTTGTGCATTCAGCCGAAGGGAGCGAG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCAGCAATGCCTCCGGTaGAGTCTTCGAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMQQCLR*SLRSPQ
Trigger: CTGAGGGCTTCGAAGACTTCACCGGAGGCATTGCTG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCTTCAGCCCCAGCTTaGCACTCCCGTCCGAATCTA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPSAPA*HSRPNL
Trigger: TAGATTCGGACGGGAGTGGCAAGCTGGGGCTGAAGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGACCGTCCTGTGGGGCTaGCCTCCAGGAAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMTVLWG*PPGRKT
Trigger: TGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACGGT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTGTCTGAGCGCTCCCTaGCGCGATTCGTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMCLSAP*RDSSGR
Trigger: TCTTCCTGACGAATCGCGCCAGGGAGCGCTCAGACA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCTCCTCCTCCAGCTTaGTCAGGTACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPPPPA*SGTEGS
Trigger: TGAACCCTCAGTACCTGATCAAGCTGGAGGAGGAGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCAAAGCCGATGGTGTaGATGTCCTCGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPKPMV*MSSPIF
Trigger: GAAGATGGGCGAGGACATGCACACCATCGGCTTTGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCTCCGCATCCTCTCCTaGCAACTGGGCAAACAGTCT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMLRILS*QLGKQS
Trigger: AGACTGTTTGCCCAGTTGGCAGGAGAGGATGCGGAG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCATCTTCATGCCGTCTaGTCAGCCTTTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMHLHAV*SAFPSP
Trigger: AGGAGAGGGAAAGGCTGACCAGACGGCATGAAGATG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCCTCCTCGGCTCCGGTaGCCGAGTACGCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDPPRLR*PSTRAP
Trigger: AGGGGCACGCGTACTCGGTCACCGGAGCCGAGGAGG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGGAAGAAGTTTTTGCTaGGGTGGATGTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMGRSFC*GGCWSA
Trigger: GGCAGACCAACATCCACCTCAGCAAAAACTTCTTCC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCGATGCCCGCCATGCTaGGGTCCCGGCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDRCPPC*GPGGRT
Trigger: AGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCTGGAACCTCATAGATaGCAAAGCCGATGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMLEPHR*QSRWCA
Trigger: TGCACACCATCGGCTTTGGCATCTATGAGGTTCCAG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGATGAGCTGGTCATCTaGAAACCGAGCAACGATGAC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMDELVI*KPSNDD
Trigger: GTCATCGTTGCTCGGTTTGCAGATGACCAGCTCATC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTTGATGGCCCTGTCGTaGGAGCCCAGCCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQLMALS*EPSPSA
Trigger: GGCCGAGGGGCTGGGCTCCCACGACAGGGCCATCAA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGATGCTGAAGCCATCTaGCTTGATATCTTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMDAEAI*LDILAL
Trigger: AAGCGCCAAGATATCAAGTCAGATGGCTTCAGCATC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGGGAAGGACGGGTCCTaGAAGAGCGTCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDGKDGS*KSVPAS
Trigger: GGAGGCCGGGACGCTCTTCCAGGACCCGTCCTTCCC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTGCAACCTCCCGCGGTaGAGCCCCGCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDCNLPR*SPASSS
Trigger: GGAACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCAGGAAGGAAAACATaGCATGGTGTGATTGCATGG +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPGRKT*HGVIAW
Trigger: CCATGCAATCACACCATGCCATGTTTTCCTTCCTGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCCAGCTTCTGAAACGTaGTGGCCTCCGAGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQPASET*WPPSPR
Trigger: CCGCGGACTCGGAGGCCATCACGTTTCAGAAGCTGG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGCCCCACCAGGAAGGTaGAGCCGCTCTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDAPPGR*SRSPHP
Trigger: AGGATGGGGAGAGCGGCTGCACCTTCCTGGTGGGGC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGCTCCCCGTCCTTGGTaGGCAGCCTGTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQAPRPW*AACHPP
Trigger: TGGTGGATGACAGGCTGCCCACCAAGGACGGGGAGC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGAAATCGATGATGAGCTaGTCATCTGCAAACCGAGCA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMKSMMS*SSANRA
Trigger: TGCTCGGTTTGCAGATGACCAGCTCATCATCGATTT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCGCCGTCGGTGCTTCTaGATGAGCCCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDRRRCF*MSPTRK
Trigger: CTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTGTTCGGGTAGTTCCTaGAACCTCCCGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQCSGSS*NLPRWS
Trigger: GCTCCACCGCGGGAGGTTGCAGGAACTACCCGAACA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGGTTTACAAATTGGATaGCTGGTTTTGGCATACTGG +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMGLQIG*LVLAYW
Trigger: CCAGTATGCCAAAACCAGGCATCCAATTTGTAAACC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCAGCGCAGATCTCCGTaGGGCGCTTCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDQRRSP*GASTRC
Trigger: GCATCGAGTGGAAGCGCCCCACGGAGATCTGCGCTG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCTTCGAAGCCCTCAGTaGTGGCACCCCCTGATAGCG +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQLRSPQ*WHPLIA
Trigger: CGCTATCAGGGGGTGCCACCACTGAGGGCTTCGAAG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCTCGCTCCCTTCGGCTaGATGCACAAAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQLAPFG*MHKEQL
Trigger: GAGCTGCTCTTTGTGCATTCAGCCGAAGGGAGCGAG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGTCGGTGCTTCTGAATaGGCCCCACCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDVGASE*APPGRC
Trigger: GCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGAC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGTTGATGAAGGTGTCTaGGCGCTCCCTGGCGCGATT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQVDEGV*ALPGAI
Trigger: AATCGCGCCAGGGAGCGCTCAGACACCTTCATCAAC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGACTCTCCAGATGCCTTaGCAAGATTACTTCATGATA +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMTLQMP*QDYFMI
Trigger: TATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCCAGCTTGGCCGCGATaGCCGCCATGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSPAWPR*PPCCGP
Trigger: GGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR GCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCTCCCTTCGGCTGAATaGACAAAGAGCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQLPSAE*TKSSSP
Trigger: CGGGGAGCTGCTCTTTGTGCATTCAGCCGAAGGGAG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTGTTCGGGTAGTTCCTaGAACCTCCCGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDCSGSS*NLPRWS
Trigger: GCTCCACCGCGGGAGGTTGCAGGAACTACCCGAACA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTTCTCGGGATCCAGCTaGTTAAATATCTTGAATAGC +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMFSGSS*LNILNS
Trigger: GCTATTCAAGATATTTAAGCAGCTGGATCCCGAGAA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTTTTGCAGAGCTTTCTaGATGATCTTGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMFCRAF*MILNRL
Trigger: CAACCTGTTCAAGATCATCCAGAAAGCTCTGCAAAA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCAAAGTGTATTTCTATaGAAGCTTAGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMQSVFL*KLSPWL
Trigger: CAGCCAAGGACTAAGCTTCCATAGAAATACACTTTG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCAGCAATGCCTCCGGTaGAGTCTTCGAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDQQCLR*SLRSPQ
Trigger: CTGAGGGCTTCGAAGACTTCACCGGAGGCATTGCTG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTGTAGGTATCGCTGGTaGGAGTGTCTGGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQCRYRW*ECLGSG
Trigger: ACCTGACCCCAGACACTCTCACCAGCGATACCTACA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCCTCCTCCTCCAGCTTaGTCAGGTACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQPPPPA*SGTEGS
Trigger: TGAACCCTCAGTACCTGATCAAGCTGGAGGAGGAGG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCCCAAGCGACAGAGGTaGGTCTTCTCTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDPKRQR*VFSPGL
Trigger: GAGTCCAGGAGAGAAGACTCACCTCTGTCGCTTGGG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTCCCGGCGGCCGTACTaGGCAGAGAAAGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSSRRPY*AEKGRG
Trigger: GCCCCGACCTTTCTCTGCGCAGTACGGCCGCCGGGA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR GCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGTTGATCTTGGCGTATaGCTTCTCCAGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQVDLGV*LLQQGA
Trigger: AGCGCCCTGCTGGAGAAGGCATACGCCAAGATCAAC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCCAAAGCCGATGGTGTaGATGTCCTCGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQPKPMV*MSSPIF
Trigger: GAAGATGGGCGAGGACATGCACACCATCGGCTTTGG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTGTCTGAGCGCTCCCTaGCGCGATTCGTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDCLSAP*RDSSGR
Trigger: TCTTCCTGACGAATCGCGCCAGGGAGCGCTCAGACA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTGTAGGTATCGCTGGTaGGAGTGTCTGGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDCRYRW*ECLGSG
Trigger: ACCTGACCCCAGACACTCTCACCAGCGATACCTACA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGTTGATCTTGGCGTATaGCTTCTCCAGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDVDLGV*LLQQGA
Trigger: AGCGCCCTGCTGGAGAAGGCATACGCCAAGATCAAC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAGATGCCAAAGCCGATaGTGTGCATGTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDRCQSR*CACPRP
Trigger: TGGGCGAGGACATGCACACCATCGGCTTTGGCATCT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGGAAGAAGTTTTTGCTaGGGTGGATGTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQGRSFC*GGCWSA
Trigger: GGCAGACCAACATCCACCTCAGCAAAAACTTCTTCC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCAAACCGAGCAACGATaGCTTGGTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDQTEQR*LGGVDR
Trigger: CCTGTCAACTCCACCAAGTCATCGTTGCTCGGTTTG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGCATACTGGTTCAGTTaGTCAAGCGCAGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQAYWFS*SSAGSL
Trigger: AAGGGATCCTGCGCTTGATCAACTGAACCAGTATGC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCCCAGGGATTTCGGATaGGGATCAGTTTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDPRDFG*GSVSVG
Trigger: GCCTACAGAAACTGATCCGCATCCGAAATCCCTGGG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGAGGTGGATGTTGGTCTaGCCACTTAACTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQRWMLV*PLNSSG
Trigger: TCCAGAGGAGTTAAGTGGGCAGACCAACATCCACCT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCCTCCAATGATAAACTaGGGGTCAGCGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDPPMIN*GSAQIS
Trigger: GGAGATCTGCGCTGACCCCCAGTTTATCATTGGAGG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGCTGGTGAGAGTGTCTaGGGTCAGGTTACAGATCTC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDAGESV*GQVTDL
Trigger: GAGATCTGTAACCTGACCCCAGACACTCTCACCAGC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTCCCCTCTAACTCCATaGACAGACACTAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQSPLTP*TDTSGG
Trigger: ACCACCACTAGTGTCTGTCCATGGAGTTAGAGGGGA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGTCGGTGCTTCTGAATaGGCCCCACCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSVGASE*APPGRC
Trigger: GCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGAC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGATGCTGAAGCCATCTaGCTTGATATCTTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQDAEAI*LDILAL
Trigger: AAGCGCCAAGATATCAAGTCAGATGGCTTCAGCATC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGCATACTGGTTCAGTTaGTCAAGCGCAGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDAYWFS*SSAGSL
Trigger: AAGGGATCCTGCGCTTGATCAACTGAACCAGTATGC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGAAACATGGCATGGTGTaGTTGCATGGGGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQKHGMV*LHGVTL
Trigger: AAGGGTTACCCCATGCAATCACACCATGCCATGTTT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCTGGAACCTCATAGATaGCAAAGCCGATGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDLEPHR*QSRWCA
Trigger: TGCACACCATCGGCTTTGGCATCTATGAGGTTCCAG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAGGTGGATGTTGGTCTaGCCACTTAACTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDRWMLV*PLNSSG
Trigger: TCCAGAGGAGTTAAGTGGGCAGACCAACATCCACCT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACACAGGCGTGAACCACTaGACCTGGCCTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDTGVNH*TWPSFF
Trigger: AAAGAAAGAAGGCCAGGTGCAGTGGTTCACGCCTGT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTATAGTGTTCCAGCTTaGGCAGTTGTCATTCCACCG +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQYSVPA*AVVIPP
Trigger: CGGTGGAATGACAACTGCCCAAGCTGGAACACTATA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTCCTCTCCTGCCAACTaGGCAAACAGTCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDSSPAN*ANSLLN
Trigger: ATTCAGGAGACTGTTTGCCCAGTTGGCAGGAGAGGA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAGCTTGATCAGGTACTaGGGGTTCATCCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDSLIRY*GFIQNV
Trigger: CACATTCTGGATGAACCCTCAGTACCTGATCAAGCT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGTTGATGAAGGTGTCTaGGCGCTCCCTGGCGCGATT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSVDEGV*ALPGAI
Trigger: AATCGCGCCAGGGAGCGCTCAGACACCTTCATCAAC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGGGCAAACAGTCTCCTaGATCCATCATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQGQTVS*IHHQCH
Trigger: ATGACATTGATGATGGATTCAGGAGACTGTTTGCCC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACATGACTTGGTGGAGTTaGCAGGGCATCTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDMTWWS*QGILKP
Trigger: AGGTTTCAAGATGCCCTGTCAACTCCACCAAGTCAT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAAACATGGCATGGTGTaGTTGCATGGGGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDKHGMV*LHGVTL
Trigger: AAGGGTTACCCCATGCAATCACACCATGCCATGTTT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAATTCTCCATCTTCATaGCGTCTGGTCAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDNSPSS*RLVSLS
Trigger: GGAAAGGCTGACCAGACGGCATGAAGATGGAGAATT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCCTTCAGCCCCAGCTTaGCACTCCCGTCCGAATCTA +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSPSAPA*HSRPNL
Trigger: TAGATTCGGACGGGAGTGGCAAGCTGGGGCTGAAGG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCCTGGACTCTCCAGATaGCTTGACAAGATTACTTCA +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQPGLSR*LDKITS
Trigger: TGAAGTAATCTTGTCAAGGCATCTGGAGAGTCCAGG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGAAATCGATGATGAGCTaGTCATCTGCAAACCGAGCA +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQKSMMS*SSANRA
Trigger: TGCTCGGTTTGCAGATGACCAGCTCATCATCGATTT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
3UTR CAA 72 bp ACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTaGATCAAGCGCAGGATCCCTTTGGTCTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: TNWMPGFGILVQ*IKRRIPLVFVR
Trigger: TCTTACAAAGACCAAAGGGATCCTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGTTGACAGGGCATCTTaGAACCTGCTTCTTCTAATG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDVDRAS*NLLLLM
Trigger: CATTAGAAGAAGCAGGTTTCAAGATGCCCTGTCAAC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAGGAGAGAGCCTTTTTaGAGAGCTTTCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDRREPF*RAFWMI
Trigger: GATCATCCAGAAAGCTCTGCAAAAAGGCTCTCTCCT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCTCCGCATCCTCTCCTaGCAACTGGGCAAACAGTCT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSLRILS*QLGKQS
Trigger: AGACTGTTTGCCCAGTTGGCAGGAGAGGATGCGGAG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTAGATGCCAAAGCCGATaGTGTGCATGTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSRCQSR*CACPRP
Trigger: TGGGCGAGGACATGCACACCATCGGCTTTGGCATCT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCGAACTCTTCAAGATTaGCCTCGATTTCATCATCGA +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQRTLQD*PRFHHR
Trigger: TCGATGATGAAATCGAGGCCAATCTTGAAGAGTTCG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTTCCCAGTTGGCTCATaGGAAATGGTAATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDFPVGS*EMVILD
Trigger: GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGCATAGTCGAACATCCTaGAAATTCGTTCCTTTGCGT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQHSRTS*KFVPLR
Trigger: ACGCAAAGGAACGAATTTCCAGGATGTTCGACTATG...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCAAACCGAGCAACGATaGCTTGGTGGAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSQTEQR*LGGVDR
Trigger: CCTGTCAACTCCACCAAGTCATCGTTGCTCGGTTTG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCCCAGGGATTTCGGATaGGGATCAGTTTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSPRDFG*GSVSVG
Trigger: GCCTACAGAAACTGATCCGCATCCGAAATCCCTGGG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGGTTTACAAATTGGATaGCTGGTTTTGGCATACTGG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDGLQIG*LVLAYW
Trigger: CCAGTATGCCAAAACCAGGCATCCAATTTGTAAACC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTTTTGCAGAGCTTTCTaGATGATCTTGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQFCRAF*MILNRL
Trigger: CAACCTGTTCAAGATCATCCAGAAAGCTCTGCAAAA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCATCTTCATGCCGTCTaGTCAGCCTTTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSHLHAV*SAFPSP
Trigger: AGGAGAGGGAAAGGCTGACCAGACGGCATGAAGATG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGCTGGTGAGAGTGTCTaGGGTCAGGTTACAGATCTC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSAGESV*GQVTDL
Trigger: GAGATCTGTAACCTGACCCCAGACACTCTCACCAGC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGAACCCTTCTCAGGATaGTCTGCAGCTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSEPFSG*SAAQRQ
Trigger: CTGCCTTTGAGCTGCAGACCATCCTGAGAAGGGTTC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTTTCATAGGAATTCATaGTACCAGACCTGTCAACGT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQFHRNS*YQTCQR
Trigger: ACGTTGACAGGTCTGGTACCATGAATTCCTATGAAA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTGGAAGCTTAGTCCTTaGCTGATTTTCCATCATGAG +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDWKLSP*LIFHHE
Trigger: CTCATGATGGAAAATCAGCCAAGGACTAAGCTTCCA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTTGGATGCCTGGTTTTaGCATACTGGTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDLDAWF*HTGSVD
Trigger: ATCAACTGAACCAGTATGCCAAAACCAGGCATCCAA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGATAACTTCAAAGTACTaGGAAACAGAGCCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQITSKY*ETEPRD
Trigger: ATCTCTTGGCTCTGTTTCTCAGTACTTTGAAGTTAT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGATGAGCTGGTCATCTaGAAACCGAGCAACGATGAC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSDELVI*KPSNDD
Trigger: GTCATCGTTGCTCGGTTTGCAGATGACCAGCTCATC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTAGCTTGATCAGGTACTaGGGGTTCATCCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSSLIRY*GFIQNV
Trigger: CACATTCTGGATGAACCCTCAGTACCTGATCAAGCT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTATGACTTGGTGGAGTTaGCAGGGCATCTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSMTWWS*QGILKP
Trigger: AGGTTTCAAGATGCCCTGTCAACTCCACCAAGTCAT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGACAAGATTACTTCATaGTATACCATGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDDKITS*YTMFPS
Trigger: ACTGGGAAACATGGTATATCATGAAGTAATCTTGTC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCATGGTGTGATTGCATaGGGTAACCCTTTATTTTTA +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDHGVIA*GNPLFL
Trigger: TAAAAATAAAGGGTTACCCCATGCAATCACACCATG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCCAGGAAGGAAAACATaGCATGGTGTGATTGCATGG +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSPGRKT*HGVIAW
Trigger: CCATGCAATCACACCATGCCATGTTTTCCTTCCTGG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGGGCAAACAGTCTCCTaGATCCATCATCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSGQTVS*IHHQCH
Trigger: ATGACATTGATGATGGATTCAGGAGACTGTTTGCCC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTAGGAGAGAGCCTTTTTaGAGAGCTTTCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSRREPF*RAFWMI
Trigger: GATCATCCAGAAAGCTCTGCAAAAAGGCTCTCTCCT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAATTGGTTTACAAATTaGATGCCTGGTTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDNWFTN*MPGFGI
Trigger: TATGCCAAAACCAGGCATCCAATTTGTAAACCAATT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACCATAAAGTTTTGAGGTaGCAAACAGCTTATTTTGTC +
Preference number: 4 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDHKVLR*QTAYFV
Trigger: GACAAAATAAGCTGTTTGCCACCTCAAAACTTTATG...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGCTGATTTTCCATCATaGGAAGTCTTCAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSADFPS*EVFRQI
Trigger: AATCTGCCTGAAGACTTCTCATGATGGAAAATCAGC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR TCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTACTCTCCAGATGCCTTaGCAAGATTACTTCATGATA +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSTLQMP*QDYFMI
Trigger: TATCATGAAGTAATCTTGTCAAGGCATCTGGAGAGT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR GCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTTCTCGGGATCCAGCTaGTTAAATATCTTGAATAGC +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSFSGSS*LNILNS
Trigger: GCTATTCAAGATATTTAAGCAGCTGGATCCCGAGAA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTTTCATAGGAATTCATaGTACCAGACCTGTCAACGT +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSFHRNS*YQTCQR
Trigger: ACGTTGACAGGTCTGGTACCATGAATTCCTATGAAA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CCA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTACAAATTGGATGCCTaGTTTTGGCATACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSYKLDA*FWHTGS
Trigger: TGAACCAGTATGCCAAAACCAGGCATCCAATTTGTA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 90 bp CGTGGGAGCCCAGCCCCTCGGCCGCCTCCCGGTCCTTCGCCAGCTTaGCCGCGATGCCCGCCATGCTGCGGTCCCGGCGGCCGTACTGCG +
Preference number: 5 (lower is better)
Translates to: RGSPAPRPPPGPSPA*PRCPPCCGPGGRTA
Trigger: CGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCGAGGGGCTGGGCTCCCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 90 bp CGGCCGCCTCCCGGTCCTTCGCCAGCTTGGCCGCGATGCCCGCCATaGTGCGGTCCCGGCGGCCGTACTGCGCAGAGAAAGGTCGGGGCG +
Preference number: 5 (lower is better)
Translates to: RPPPGPSPAWPRCPP*CGPGGRTAQRKVGA
Trigger: CGCCCCGACCTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 90 bp AGCTTGGCCGCGATGCCCGCCATGCTGCGGTCCCGGCGGCCGTACTaGGCAGAGAAAGGTCGGGGCGACTCCGCGCTGCGCTCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SLAAMPAMLRSRRPY*AEKGRGDSALRSAG
Trigger: CCCAGCCGAGCGCAGCGCGGAGTCGCCCCGACCTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 90 bp CCAGCCCCTCGGCCGCCTCCCGGTCCTTCGCCAGCTTGGCCGCGATaGCCGCCATGCTGCGGTCCCGGCGGCCGTACTGCGCAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PAPRPPPGPSPAWPR*PPCCGPGGRTAQRK
Trigger: CTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCGAGGGGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 90 bp CCGCCTCCCGGTCCTTCGCCAGCTTGGCCGCGATGCCCGCCATGCTaGGGTCCCGGCGGCCGTACTGCGCAGAGAAAGGTCGGGGCGACT +
Preference number: 5 (lower is better)
Translates to: PPPGPSPAWPRCPPC*GPGGRTAQRKVGAT
Trigger: AGTCGCCCCGACCTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS CCA 90 bp TCCTTGAAGCCCAGGGCCGAGGGGATGGCCGGGAAGGACGGGTCCTaGAAGAGCGTCCCGGCCTCCAGGCACTCGTTCCGCAGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: SLKPRAEGMAGKDGS*KSVPASRHSFRSAS
Trigger: CGAGGCGCTGCGGAACGAGTGCCTGGAGGCCGGGACGCTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCTGGGCTTCAAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 90 bp CCACAAACTGTGCCTGTGGCCATCGTGTCAGGACAGCAGGACCCCTaGACATCCGCGCCGGCCGTTACCTCCTCGGCTCCGGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: PQTVPVAIVSGQQDP*TSAPAVTSSAPVTE
Trigger: CTCGGTCACCGGAGCCGAGGAGGTAACGGCCGGCGCGGATGTGCAGGGGTCCTGCTGTCCTGACACGATGGCCACAGGCACAGTTTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483579.1
CDS TCA 90 bp GTGTGCATGTCCTCGCCCATCTTCCTCTGCCGCCGTCGGTGCTTCTaGATGAGCCCCACCAGGAAGGTGCAGCCGCTCTCCCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: VCMSSPIFLCRRRCF*MSPTRKVQPLSPSS
Trigger: GGAGGATGGGGAGAGCGGCTGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGACATGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000480581.1
CDS CCA 90 bp CTGTTGGTGGCATGTGTTTGTGGTGGCAGGCTGTCCCAGGTCCCTTaGATGAGGGTGACCCTTGAAGGTCCGGTGGGCATCATGGATGGG +
Preference number: 5 (lower is better)
Translates to: LLVACVCGGRLSQVP*MRVTLEGPVGIMDG
Trigger: CCCATCCATGATGCCCACCGGACCTTCAAGGGTCACCCTCATCCAAGGGACCTGGGACAGCCTGCCACCACAAACACATGCCACCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTCTCCTGGCGGCAGCTaGAAGCGGTTGAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMSPGGS*KRLSTS
Trigger: GGAGGTGCTCAACCGCTTCAAGCTGCCGCCAGGAGA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp CTCCTCACCACTTCACTCCTCTGTTACACGGACAGGACTGACAACTaGCATTCTCACCCAGTGTCAGCCACTTCGCCCGGCCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LLTTSLLCYTDRTDN*HSHPVSATSPGPLW
Trigger: CCACAGAGGGCCGGGCGAAGTGGCTGACACTGGGTGAGAATGGCAGTTGTCAGTCCTGTCCGTGTAACAGAGGAGTGAAGTGGTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTCCTTCAGCCCCAGCTaGCCACTCCCGTCCGAATCT +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMSFSPS*PLPSES
Trigger: AGATTCGGACGGGAGTGGCAAGCTGGGGCTGAAGGA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS TCA 90 bp TGGGAGGGGGCTTCTTCAACTCATACCACTCAGCAATGCCTCCGGTaGAGTCTTCGAAGCCCTCAGTGGTGGCACCCCCTGATAGCGCTT +
Preference number: 5 (lower is better)
Translates to: WEGASSTHTTQQCLR*SLRSPQWWHPLIAL
Trigger: AAGCGCTATCAGGGGGTGCCACCACTGAGGGCTTCGAAGACTTCACCGGAGGCATTGCTGAGTGGTATGAGTTGAAGAAGCCCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 90 bp TCTGCCCACTTAACTCCTCTGGAACCTCATAGATGCCAAAGCCGATaGTGTGCATGTCCTCGCCCATCTTCCTCTGCCGCCGTCGGTGCT +
Preference number: 5 (lower is better)
Translates to: SAHLTPLEPHRCQSR*CACPRPSSSAAVGA
Trigger: AGCACCGACGGCGGCAGAGGAAGATGGGCGAGGACATGCACACCATCGGCTTTGGCATCTATGAGGTTCCAGAGGAGTTAAGTGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTTCCAGCTTGGGCAGTaGTCATTCCACCGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMFQLGQ*SFHRPV
Trigger: GACAGGGCGGTGGAATGACAACTGCCCAAGCTGGAA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp CGGAAGCACATGCCCACAGGGGTTTCACATCCATTCAGCTCCGCCTaGAGAGATGCCCAGTCTTTCCACAGTGTTCCCAGCCTTCCTCTA +
Preference number: 5 (lower is better)
Translates to: RKHMPTGVSHPFSSA*RDAQSFHSVPSLPL
Trigger: TAGAGGAAGGCTGGGAACACTGTGGAAAGACTGGGCATCTCTGCAGGCGGAGCTGAATGGATGTGAAACCCCTGTGGGCATGTGCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCCGAGCAACGATGACTaGGTGGAGTTGACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMPSNDD*VELTGH
Trigger: ATGCCCTGTCAACTCCACCAAGTCATCGTTGCTCGG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp CATGCCCACAGGGGTTTCACATCCATTCAGCTCCGCCTGCAGAGATaGCCAGTCTTTCCACAGTGTTCCCAGCCTTCCTCTAAGAGACTC +
Preference number: 5 (lower is better)
Translates to: HAHRGFTSIQLRLQR*PVFPQCSQPSSKRL
Trigger: GAGTCTCTTAGAGGAAGGCTGGGAACACTGTGGAAAGACTGGGCATCTCTGCAGGCGGAGCTGAATGGATGTGAAACCCCTGTGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CCA 90 bp GGCAGGAACAGCGTCCACATGGCAGGAACCTGGCTCGGTTCTACGTaGTGTATGATGCACTATAAAAGCAAAGACAGGACTGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GRNSVHMAGTWLGST*CMMHYKSKDRTGGR
Trigger: CCTGCCCCCAGTCCTGTCTTTGCTTTTATAGTGCATCATACACCACGTAGAACCGAGCCAGGTTCCTGCCATGTGGACGCTGTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTTGCTGAGGTGGATGTaGGTCTGCCCACTTAACTCC +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMLLRWM*VCPLNS
Trigger: GGAGTTAAGTGGGCAGACCAACATCCACCTCAGCAA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS TCA 90 bp AGGACTGGGGGCAGGAGAAAGACAACCCAGCTTCTAAACCAAGCATaGTCCACCGGACCAAGGCTGGAGCAGCATCTAAAAGAGCCCGAT +
Preference number: 5 (lower is better)
Translates to: RTGGRRKTTQLLNQA*STGPRLEQHLKEPD
Trigger: ATCGGGCTCTTTTAGATGCTGCTCCAGCCTTGGTCCGGTGGATCATGCTTGGTTTAGAAGCTGGGTTGTCTTTCTCCTGCCCCCAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CCA 90 bp GAATTCTCCATCTTCATGCCGTCTGGTCAGCCTTTCCCTCTCCTCTaGGTCTATAGTGTTCCAGCTTGGGCAGTTGTCATTCCACCGCCC +
Preference number: 5 (lower is better)
Translates to: EFSIFMPSGQPFPLL*VYSVPAWAVVIPPP
Trigger: GGGCGGTGGAATGACAACTGCCCAAGCTGGAACACTATAGACCCAGAGGAGAGGGAAAGGCTGACCAGACGGCATGAAGATGGAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS TCA 90 bp TGTCTGAGCGCTCCCTGGCGCGATTCGTCAGGAAGAAGTTTTTGCTaGGGTGGATGTTGGTCTGCCCACTTAACTCCTCTGGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: CLSAPWRDSSGRSFC*GGCWSAHLTPLEPH
Trigger: ATGAGGTTCCAGAGGAGTTAAGTGGGCAGACCAACATCCACCTCAGCAAAAACTTCTTCCTGACGAATCGCGCCAGGGAGCGCTCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp GACTTGATATCTTGGCGCTTTGCTAGAACCCTTCTCAGGATGGTCTaGAGCTCAAAGGCAGAGATCTCCGCATCCTCTCCTGCCAACTGG +
Preference number: 5 (lower is better)
Translates to: DLISWRFARTLLRMV*SSKAEISASSPANW
Trigger: CCAGTTGGCAGGAGAGGATGCGGAGATCTCTGCCTTTGAGCTGCAGACCATCCTGAGAAGGGTTCTAGCAAAGCGCCAAGATATCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000474026.5
ENST00000487223.5
CDS GCA 90 bp CAGAAAGGAAGCACCTGGAGGAGGCTGTTGAGACCTGGCTTTGCCTaGTTACTGTGCCAGGCGGCTCCAAAGGAAACTTGGATTCAAGAA +
Preference number: 5 (lower is better)
Translates to: QKGSTWRRLLRPGFA*LLCQAAPKETWIQE
Trigger: TTCTTGAATCCAAGTTTCCTTTGGAGCCGCCTGGCACAGTAAGCAGGCAAAGCCAGGTCTCAACAGCCTCCTCCAGGTGCTTCCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS TCA 90 bp ACAGCGTCCACATGGCAGGAACCTGGCTCGGTTCTACGTGGTGTATaGTGCACTATAAAAGCAAAGACAGGACTGGGGGCAGGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TASTWQEPGSVLRGV*CTIKAKTGLGAGER
Trigger: TCTTTCTCCTGCCCCCAGTCCTGTCTTTGCTTTTATAGTGCATCATACACCACGTAGAACCGAGCCAGGTTCCTGCCATGTGGACGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS GCA 90 bp GAGCAGCATCTAAAAGAGCCCGATGTGCTACCGGTTGCACTGCCTTaGTGTGAAAGAAATGTACTACAGGTGGGTCAAAGTGCCCCGTGT +
Preference number: 5 (lower is better)
Translates to: EQHLKEPDVLPVALP*CERNVLQVGQSAPC
Trigger: ACACGGGGCACTTTGACCCACCTGTAGTACATTTCTTTCACAGCAAGGCAGTGCAACCGGTAGCACATCGGGCTCTTTTAGATGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGAAGGAGAGAGCCTTTTaGCAGAGCTTTCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMKERAF*QSFLDD
Trigger: ATCATCCAGAAAGCTCTGCAAAAAGGCTCTCTCCTT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGCAGTTCCCATCCATTTaGGTGAGTTTCCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMQFPSI*VSFHFL
Trigger: CAAGAAGTGGAAACTCACCAAAATGGATGGGAACTG...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTCTCCTGGCGGCAGCTaGAAGCGGTTGAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQSPGGS*KRLSTS
Trigger: GGAGGTGCTCAACCGCTTCAAGCTGCCGCCAGGAGA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS TCA 90 bp GCATCTAAAAGAGCCCGATGTGCTACCGGTTGCACTGCCTTGCTGTaGAAGAAATGTACTACAGGTGGGTCAAAGTGCCCCGTGTGTCTA +
Preference number: 5 (lower is better)
Translates to: ASKRARCATGCTALL*KKCTTGGSKCPVCL
Trigger: TAGACACACGGGGCACTTTGACCCACCTGTAGTACATTTCTTTCACAGCAAGGCAGTGCAACCGGTAGCACATCGGGCTCTTTTAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CCA 90 bp GGTAGGATAGTAGGAGGCACCGTCCTAGCCGTGGACTGCTGGAGCTaGGATTGCTATACGACAGAAAGACATACCTCGTATAAACCAATG +
Preference number: 5 (lower is better)
Translates to: GRIVGGTVLAVDCWS*DCYTTERHTSYKPM
Trigger: CATTGGTTTATACGAGGTATGTCTTTCTGTCGTATAGCAATCCCAGCTCCAGCAGTCCACGGCTAGGACGGTGCCTCCTACTATCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGGCAGCTTGAAGCGGTaGAGCACCTCCCGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDGSLKR*STSRRL
Trigger: CAACCTCCGGGAGGTGCTCAACCGCTTCAAGCTGCC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTTCATCATCGACAGCTaGGTAGTCAGCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMFIIDS*VVSFLF
Trigger: GAAAAGAAAGCTGACTACCAAGCTGTCGATGATGAA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTCCTTCAGCCCCAGCTaGCCACTCCCGTCCGAATCT +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQSFSPS*PLPSES
Trigger: AGATTCGGACGGGAGTGGCAAGCTGGGGCTGAAGGA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 90 bp TCTAAGAGACTCTCAGGCAGGAACAGCGTCCACATGGCAGGAACCTaGCTCGGTTCTACGTGGTGTATGATGCACTATAAAAGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: SKRLSGRNSVHMAGT*LGSTWCMMHYKSKD
Trigger: GTCTTTGCTTTTATAGTGCATCATACACCACGTAGAACCGAGCCAGGTTCCTGCCATGTGGACGCTGTTCCTGCCTGAGAGTCTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCGGTCCTTCGCCAGCTaGGCCGCGATGCCCGCCATG +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSRSFAS*AAMPAM
Trigger: CATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGATGTCAACCATAATTTaGCATGTCTCGATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMMSTII*HVSMLK
Trigger: CTTCAGCATCGAGACATGCAAAATTATGGTTGACAT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGTGGGAAATGGTAATCTaGGACTGTTGTTTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMWEMVI*DCCLVE
Trigger: TTCTACCAAACAACAGTCCAAGATTACCATTTCCCA...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp ATAGTAGGAGGCACCGTCCTAGCCGTGGACTGCTGGAGCTGGGATTaGTATACGACAGAAAGACATACCTCGTATAAACCAATGTTGTGT +
Preference number: 5 (lower is better)
Translates to: IVGGTVLAVDCWSWD*YTTERHTSYKPMLC
Trigger: ACACAACATTGGTTTATACGAGGTATGTCTTTCTGTCGTATAGCAATCCCAGCTCCAGCAGTCCACGGCTAGGACGGTGCCTCCTACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGCTTTCTGGATGATCTaGAACAGGTTGGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQAFWMI*NRLGGG
Trigger: GCCCCCTCCCAACCTGTTCAAGATCATCCAGAAAGC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTTCCAGCTTGGGCAGTaGTCATTCCACCGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDFQLGQ*SFHRPV
Trigger: GACAGGGCGGTGGAATGACAACTGCCCAAGCTGGAA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGAATAGGGTCAAGAACTaGATTGTAAGGAGAACGATT +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMNRVKN*IVRRTI
Trigger: AATCGTTCTCCTTACAATCAAGTTCTTGACCCTATT...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CGTCCTGTGGGGCTGCCCTCCAGGAAGGAAAACATGGCATGGTGTGATTGCATGGAAGTTCATAAAGTTTaGAGGTGGCAAACAGCTTAT +
Preference number: 5 (lower is better)
Translates to: RPVGLPSRKENMAWCDCMEVHKV*RWQTAY
Trigger: ATAAGCTGTTTGCCACCTCAAAACTTTATGAACTTC...CATGCAATCACACCATGCCATGTTTTCCTTCCTGGAGGGCAGCCCCACAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 90 bp TGCTACCGGTTGCACTGCCTTGCTGTGAAAGAAATGTACTACAGGTaGGTCAAAGTGCCCCGTGTGTCTACTTTAATAATCGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: CYRLHCLAVKEMYYR*VKVPRVSTLIIVTL
Trigger: CAAGGTCACGATTATTAAAGTAGACACACGGGGCACTTTGACCCACCTGTAGTACATTTCTTTCACAGCAAGGCAGTGCAACCGGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CCA 90 bp GGAAATGCTGACTGGAGCCAGGTGATAATGGAAGTATACCCCACCTaGCTTCTTTCTTTCAGTGAGAGAACTTCCTGTCATTGGGATGAC +
Preference number: 5 (lower is better)
Translates to: GNADWSQVIMEVYPT*LLSFSERTSCHWDD
Trigger: GTCATCCCAATGACAGGAAGTTCTCTCACTGAAAGAAAGAAGCCAGGTGGGGTATACTTCCATTATCACCTGGCTCCAGTCAGCATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS CCA 90 bp ATGCTGACACATTTGTTCCCAAAGCCCAGCAGTCTCCTGCTTTGCTaGTCTACCACTCGCTTGTGTCCTTTTATTGATATCCAATTCTGC +
Preference number: 5 (lower is better)
Translates to: MLTHLFPKPSSLLLC*STTRLCPFIDIQFC
Trigger: GCAGAATTGGATATCAATAAAAGGACACAAGCGAGTGGTAGACCAGCAAAGCAGGAGACTGCTGGGCTTTGGGAACAAATGTGTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTTGCTGAGGTGGATGTaGGTCTGCCCACTTAACTCC +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDLLRWM*VCPLNS
Trigger: GGAGTTAAGTGGGCAGACCAACATCCACCTCAGCAA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACGGCATACTGGTTCAGTaGATCAAGCGCAGGATCCCT +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDGILVQ*IKRRIP
Trigger: AGGGATCCTGCGCTTGATCAACTGAACCAGTATGCC...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACATGATCTTGAACAGGTaGGGAGGGGGCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDMILNR*GGGFFN
Trigger: GTTGAAGAAGCCCCCTCCCAACCTGTTCAAGATCAT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTAGCACCTCCCGGAGGTaGATGAAGGTGTCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSSTSRR*MKVSER
Trigger: GCGCTCAGACACCTTCATCAACCTCCGGGAGGTGCT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACAGGGCCTCGTGTCCTTaGAGAGCGACTCAATGTTTT +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDRASCP*RATQCF
Trigger: AAAACATTGAGTCGCTCTCAAAGGACACGAGGCCCT...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp CAAACACCGAACAAAATTATCAAAATCGATGATGAGCTGGTCATCTaGAAACCGAGCAACGATGACTTGGTGGAGTTGACAGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: QTPNKIIKIDDELVI*KPSNDDLVELTGHL
Trigger: AAGATGCCCTGTCAACTCCACCAAGTCATCGTTGCTCGGTTTGCAGATGACCAGCTCATCATCGATTTTGATAATTTTGTTCGGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000463997.1
ENST00000472601.5
ENST00000474026.5
ENST00000487223.5
ENST00000492664.5
ENST00000498027.5
CDS GCA 90 bp TCCCAATCCCCTTGGAAATGTTTCTCCACTCTGTGCAGGAGTTGCTaGATCTTAAAGCATATGAACAGAATGTTTCCCAACACAGATCCA +
Preference number: 5 (lower is better)
Translates to: SQSPWKCFSTLCRSC*ILKHMNRMFPNTDP
Trigger: TGGATCTGTGTTGGGAAACATTCTGTTCATATGCTTTAAGATGCAGCAACTCCTGCACAGAGTGGAGAAACATTTCCAAGGGGATTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTCCTGGTTGAGGTACTaGATGGCCCTGTCGTGGGAG +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSSWLRY*MALSWE
Trigger: CTCCCACGACAGGGCCATCAAGTACCTCAACCAGGA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTTCATCATCGACAGCTaGGTAGTCAGCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQFIIDS*VVSFLF
Trigger: GAAAAGAAAGCTGACTACCAAGCTGTCGATGATGAA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTCGAACTCTTCAAGATaGGCCTCGATTTCATCATCG +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDSNSSR*ASISSS
Trigger: CGATGATGAAATCGAGGCCAATCTTGAAGAGTTCGA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGAGCTGCTTAAATATCTaGAATAGCGTTTCCAGCCGA +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQSCLNI*NSVSSR
Trigger: TCGGCTGGAAACGCTATTCAAGATATTTAAGCAGCT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGGTAATCTTGGACTGTaGTTTGGTAGAATCAACAGC +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQGNLGL*FGRINS
Trigger: GCTGTTGATTCTACCAAACAACAGTCCAAGATTACC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGTACAAAACCTGTCTCTaGTTTAACCCAAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQYKTCL*FNPSDR
Trigger: TCTGTCGCTTGGGTTAAACAAGAGACAGGTTTTGTA...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp AAATCCCAATCCCCTTGGAAATGTTTCTCCACTCTGTGCAGGAGTTaGTGCATCTTAAAGCATATGAACAGAATGTTTCCCAACACAGAT +
Preference number: 5 (lower is better)
Translates to: KSQSPWKCFSTLCRS*CILKHMNRMFPNTD
Trigger: ATCTGTGTTGGGAAACATTCTGTTCATATGCTTTAAGATGCAGCAACTCCTGCACAGAGTGGAGAAACATTTCCAAGGGGATTGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS GCA 90 bp TTATGGGTAAAATCCCAATCCCCTTGGAAATGTTTCTCCACTCTGTaGAGGAGTTGCTGCATCTTAAAGCATATGAACAGAATGTTTCCC +
Preference number: 5 (lower is better)
Translates to: LWVKSQSPWKCFSTL*RSCCILKHMNRMFP
Trigger: GGGAAACATTCTGTTCATATGCTTTAAGATGCAGCAACTCCTGCACAGAGTGGAGAAACATTTCCAAGGGGATTGGGATTTTACCCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS-3UTR CAA 90 bp CTTCATGATATACCATGTTTCCCAGTTGGCTCATGGGAAATGGTAATCTTGGACTACAAAACCTGTCTCTaGTTTAACCCAAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: LHDIPCFPVGSWEMVILDYKTCL*FNPSDR
Trigger: TCTGTCGCTTGGGTTAAACAAGAGACAGGTTTTGTA...GTCCAAGATTACCATTTCCCATGAGCCAACTGGGAAACATGGTATATCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTGGCATACTGGTTCAGTaGATCAAGCGCAGGATCCCT +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSGILVQ*IKRRIP
Trigger: AGGGATCCTGCGCTTGATCAACTGAACCAGTATGCC...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 90 bp GCTAATACAATGCATAATAGCAGAATGAGACAGTTATTTAGTTGCTaGCTTCCTCCAGAGTTCAAAATCCATGGAAAAGAGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ANTMHNSRMRQLFSC*LPPEFKIHGKELPV
Trigger: CACTGGCAGCTCTTTTCCATGGATTTTGAACTCTGGAGGAAGGCAGCAACTAAATAACTGTCTCATTCTGCTATTATGCATTGTATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTATGATCTTGAACAGGTaGGGAGGGGGCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSMILNR*GGGFFN
Trigger: GTTGAAGAAGCCCCCTCCCAACCTGTTCAAGATCAT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGAATAGGGTCAAGAACTaGATTGTAAGGAGAACGATT +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQNRVKN*IVRRTI
Trigger: AATCGTTCTCCTTACAATCAAGTTCTTGACCCTATT...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp GTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGATCAAGCGCAGGAAGTTCATAAAGTTTaGAGGTGGCAAACAGCTTAT +
Preference number: 5 (lower is better)
Translates to: VYKLDAWFWHTGSVDQAQEVHKV*RWQTAY
Trigger: ATAAGCTGTTTGCCACCTCAAAACTTTATGAACTTC...CTGCGCTTGATCAACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 90 bp ACAGAGTGGGTGAAATTCAAAGAGTTACAAATACCTCTTCAAGATTaGCCTCGATTTCATCATCGACAGCTTGGTAGTCAGCTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: TEWVKFKELQIPLQD*PRFHHRQLGSQLSF
Trigger: AAAAGAAAGCTGACTACCAAGCTGTCGATGATGAAATCGAGGCCAATCTTGAAGAGGTATTTGTAACTCTTTGAATTTCACCCACTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492565.1
CDS GCA 90 bp TTTGCTAATACAATGCATAATAGCAGAATGAGACAGTTATTTAGTTaGTGCCTTCCTCCAGAGTTCAAAATCCATGGAAAAGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: FANTMHNSRMRQLFS*CLPPEFKIHGKELP
Trigger: TGGCAGCTCTTTTCCATGGATTTTGAACTCTGGAGGAAGGCAGCAACTAAATAACTGTCTCATTCTGCTATTATGCATTGTATTAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTCAGTTCCCATCCATTTaGGTGAGTTTCCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSQFPSI*VSFHFL
Trigger: CAAGAAGTGGAAACTCACCAAAATGGATGGGAACTG...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTAGCTGCTTAAATATCTaGAATAGCGTTTCCAGCCGA +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSSCLNI*NSVSSR
Trigger: TCGGCTGGAAACGCTATTCAAGATATTTAAGCAGCT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTATCTTGGACTGTTGTTaGGTAGAATCAACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSILDCC*VESTAA
Trigger: TGCAGCTGTTGATTCTACCAAACAACAGTCCAAGAT...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS-3UTR CAA 90 bp TTTATCATAATTGGTTTACAAATTGGATGCCTGGTTTTGGCATACTGGTTCAGTTGGGAAATGGTAATCTaGGACTGTTGTTTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: FIIIGLQIGCLVLAYWFSWEMVI*DCCLVE
Trigger: TTCTACCAAACAACAGTCCAAGATTACCATTTCCCA...ACTGAACCAGTATGCCAAAACCAGGCATCCAATTTGTAAACCAATTATGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 72 bp CCAGCCCCTCGGCCGCCTCCCGGTCCTTCGCCAGCTTaGCCGCGATGCCCGCCATGCTGCGGTCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: PAPRPPPGPSPA*PRCPPCCGPGG
Trigger: GCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCGAGGGGCTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS CAA 72 bp CCCAGCCCCTCGGCCGCCTCCCGGTCCTTCGCCAGCTaGGCCGCGATGCCCGCCATGCTGCGGTCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: PSPSAASRSFAS*AAMPAMLRSRR
Trigger: CCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCGAGGGGCTGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 72 bp CGGCCGCCTCCCGGTCCTTCGCCAGCTTGGCCGCGATaGCCGCCATGCTGCGGTCCCGGCGGCCGTACTGCG +
Preference number: 6 (lower is better)
Translates to: RPPPGPSPAWPR*PPCCGPGGRTA
Trigger: CGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS CAA 90 bp TCGTGGGAGCCCAGCCCCTCGGCCGCCTCCCGGTCCTTCGCCAGCTaGGCCGCGATGCCCGCCATGCTGCGGTCCCGGCGGCCGTACTGC +
Preference number: 6 (lower is better)
Translates to: SWEPSPSAASRSFAS*AAMPAMLRSRRPYC
Trigger: GCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCGAGGGGCTGGGCTCCCACGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 72 bp GCGATGCCCGCCATGCTGCGGTCCCGGCGGCCGTACTaGGCAGAGAAAGGTCGGGGCGACTCCGCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: AMPAMLRSRRPY*AEKGRGDSALR
Trigger: GCGCAGCGCGGAGTCGCCCCGACCTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 72 bp CACCAGGTGGCAGCGCGGCGCACCCGGCGCCCGAGCTaGGAAAGGGACGCCCTTCTCCTCCCGCGCGGAACT +
Preference number: 6 (lower is better)
Translates to: HQVAARRTRRPS*ERDALLLPRGT
Trigger: AGTTCCGCGCGGGAGGAGAAGGGCGTCCCTTTCGCAGCTCGGGCGCCGGGTGCGCCGCGCTGCCACCTGGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483579.1
CDS CCA 72 bp CCCAGGGCCGAGGGGATGGCCGGGAAGGACGGGTCCTaGAAGAGCGTCCCGGCCTCCAGGCACTCGTTCCGC +
Preference number: 6 (lower is better)
Translates to: PRAEGMAGKDGS*KSVPASRHSFR
Trigger: GCGGAACGAGTGCCTGGAGGCCGGGACGCTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 72 bp CCCGGTCCTTCGCCAGCTTGGCCGCGATGCCCGCCATaGTGCGGTCCCGGCGGCCGTACTGCGCAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: PGPSPAWPRCPP*CGPGGRTAQRK
Trigger: CTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS GCA 72 bp GGTCCTTCGCCAGCTTGGCCGCGATGCCCGCCATGCTaGGGTCCCGGCGGCCGTACTGCGCAGAGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: GPSPAWPRCPPC*GPGGRTAQRKV
Trigger: GACCTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295006.6
CDS TCA 72 bp TCCTCGCCCATCTTCCTCTGCCGCCGTCGGTGCTTCTaGATGAGCCCCACCAGGAAGGTGCAGCCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSPIFLCRRRCF*MSPTRKVQPLS
Trigger: GGAGAGCGGCTGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000480581.1
CDS CAA 72 bp GGCGGCAGCTTGAAGCGGTTGAGCACCTCCCGGAGGTaGATGAAGGTGTCTGAGCGCTCCCTGGCGCGATTC +
Preference number: 6 (lower is better)
Translates to: GGSLKRLSTSRR*MKVSERSLARF
Trigger: GAATCGCGCCAGGGAGCGCTCAGACACCTTCATCAACCTCCGGGAGGTGCTCAACCGCTTCAAGCTGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000474026.5
ENST00000487223.5
CDS GCA 72 bp ACTGAGGGTTCATCCAGAATGTGTTCGGGTAGTTCCTaGAACCTCCCGCGGTGGAGCCCCGCCTCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: TEGSSRMCSGSS*NLPRWSPASSS
Trigger: GGAACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCAGGAACTACCCGAACACATTCTGGATGAACCCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000480581.1
CDS CCA 72 bp GCATGTGTTTGTGGTGGCAGGCTGTCCCAGGTCCCTTaGATGAGGGTGACCCTTGAAGGTCCGGTGGGCATC +
Preference number: 6 (lower is better)
Translates to: ACVCGGRLSQVP*MRVTLEGPVGI
Trigger: GATGCCCACCGGACCTTCAAGGGTCACCCTCATCCAAGGGACCTGGGACAGCCTGCCACCACAAACACATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 90 bp AAAGGCAAGGGGCCCTTCTTCTGTCAACCTGTTGGTGGCATGTGTTaGTGGTGGCAGGCTGTCCCAGGTCCCTTGGATGAGGGTGACCCT +
Preference number: 6 (lower is better)
Translates to: KGKGPFFCQPVGGMC*WWQAVPGPLDEGDP
Trigger: AGGGTCACCCTCATCCAAGGGACCTGGGACAGCCTGCCACCACAAACACATGCCACCAACAGGTTGACAGAAGAAGGGCCCCTTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS GCA 72 bp AGCACCTGGAGGAGGCTGTTGAGACCTGGCTTTGCCTaGTTACTGTGCCAGGCGGCTCCAAAGGAAACTTGG +
Preference number: 6 (lower is better)
Translates to: STWRRLLRPGFA*LLCQAAPKETW
Trigger: CCAAGTTTCCTTTGGAGCCGCCTGGCACAGTAAGCAGGCAAAGCCAGGTCTCAACAGCCTCCTCCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS GCA 72 bp AGGAAGCACCTGGAGGAGGCTGTTGAGACCTGGCTTTaGCTGCTTACTGTGCCAGGCGGCTCCAAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RKHLEEAVETWL*LLTVPGGSKGN
Trigger: GTTTCCTTTGGAGCCGCCTGGCACAGTAAGCAGGCAAAGCCAGGTCTCAACAGCCTCCTCCAGGTGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CCA 72 bp CCAGAAAGGAAGCACCTGGAGGAGGCTGTTGAGACCTaGCTTTGCCTGCTTACTGTGCCAGGCGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: PERKHLEEAVET*LCLLTVPGGSK
Trigger: TTTGGAGCCGCCTGGCACAGTAAGCAGGCAAAGCCAGGTCTCAACAGCCTCCTCCAGGTGCTTCCTTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 72 bp GGGCCCTTCTTCTGTCAACCTGTTGGTGGCATGTGTTaGTGGTGGCAGGCTGTCCCAGGTCCCTTGGATGAG +
Preference number: 6 (lower is better)
Translates to: GPFFCQPVGGMC*WWQAVPGPLDE
Trigger: CTCATCCAAGGGACCTGGGACAGCCTGCCACCACAAACACATGCCACCAACAGGTTGACAGAAGAAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS TCA 72 bp GCTTCTTCAACTCATACCACTCAGCAATGCCTCCGGTaGAGTCTTCGAAGCCCTCAGTGGTGGCACCCCCTG +
Preference number: 6 (lower is better)
Translates to: ASSTHTTQQCLR*SLRSPQWWHPL
Trigger: CAGGGGGTGCCACCACTGAGGGCTTCGAAGACTTCACCGGAGGCATTGCTGAGTGGTATGAGTTGAAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 72 bp ATGCCCACAGGGGTTTCACATCCATTCAGCTCCGCCTaGAGAGATGCCCAGTCTTTCCACAGTGTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: MPTGVSHPFSSA*RDAQSFHSVPS
Trigger: GCTGGGAACACTGTGGAAAGACTGGGCATCTCTGCAGGCGGAGCTGAATGGATGTGAAACCCCTGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS GCA 72 bp ACTTCACTCCTCTGTTACACGGACAGGACTGACAACTaGCATTCTCACCCAGTGTCAGCCACTTCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: TSLLCYTDRTDN*HSHPVSATSPG
Trigger: GCCGGGCGAAGTGGCTGACACTGGGTGAGAATGGCAGTTGTCAGTCCTGTCCGTGTAACAGAGGAGTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS CCA 72 bp CCCTTCTTCTGTCAACCTGTTGGTGGCATGTGTTTGTaGTGGCAGGCTGTCCCAGGTCCCTTGGATGAGGGT +
Preference number: 6 (lower is better)
Translates to: PFFCQPVGGMCL*WQAVPGPLDEG
Trigger: ACCCTCATCCAAGGGACCTGGGACAGCCTGCCACCACAAACACATGCCACCAACAGGTTGACAGAAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CCA 72 bp AGCTGTAACGTGTCCAAGGTCACACAGCCTGGGAATTaGGTCCTGGTCTCCTCTGTGCTCCCGCGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: SCNVSKVTQPGN*VLVSSVLPRCL
Trigger: AAGACAACGCGGGAGCACAGAGGAGACCAGGACCCAATTCCCAGGCTGTGTGACCTTGGACACGTTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS CAA 72 bp CCCTTAAAGGCAAGGGGCCCTTCTTCTGTCAACCTGTaGGTGGCATGTGTTTGTGGTGGCAGGCTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: PLKARGPSSVNL*VACVCGGRLSQ
Trigger: CTGGGACAGCCTGCCACCACAAACACATGCCACCAACAGGTTGACAGAAGAAGGGCCCCTTGCCTTTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 90 bp AAGGTGTCTGAGCGCTCCCTGGCGCGATTCGTCAGGAAGAAGTTTTaGCTGAGGTGGATGTTGGTCTGCCCACTTAACTCCTCTGGAACC +
Preference number: 6 (lower is better)
Translates to: KVSERSLARFVRKKF*LRWMLVCPLNSSGT
Trigger: GGTTCCAGAGGAGTTAAGTGGGCAGACCAACATCCACCTCAGCAAAAACTTCTTCCTGACGAATCGCGCCAGGGAGCGCTCAGACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CAA 90 bp AGGTGGGTCAAAGTGCCCCGTGTGTCTACTTTAATAATCGTGACCTaGGACCAGGCATCCCATCTGCTTCAGCAAGCGGTGACTGTGGGC +
Preference number: 6 (lower is better)
Translates to: RWVKVPRVSTLIIVT*DQASHLLQQAVTVG
Trigger: GCCCACAGTCACCGCTTGCTGAAGCAGATGGGATGCCTGGTCCAAGGTCACGATTATTAAAGTAGACACACGGGGCACTTTGACCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS TCA 72 bp GCTCCCTGGCGCGATTCGTCAGGAAGAAGTTTTTGCTaGGGTGGATGTTGGTCTGCCCACTTAACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: APWRDSSGRSFC*GGCWSAHLTPL
Trigger: CAGAGGAGTTAAGTGGGCAGACCAACATCCACCTCAGCAAAAACTTCTTCCTGACGAATCGCGCCAGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS TCA 72 bp AGAGCCCGATGTGCTACCGGTTGCACTGCCTTGCTGTaGAAGAAATGTACTACAGGTGGGTCAAAGTGCCCC +
Preference number: 6 (lower is better)
Translates to: RARCATGCTALL*KKCTTGGSKCP
Trigger: GGGGCACTTTGACCCACCTGTAGTACATTTCTTTCACAGCAAGGCAGTGCAACCGGTAGCACATCGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS TCA 72 bp GAGGCTCACGTGAGTCTGAGAGTTCAAGGACGGCAGTaGGCTATGATCACACCACTGTACTCTAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: EAHVSLRVQGRQ*AMITPLYSSLG
Trigger: ACCCAGGCTAGAGTACAGTGGTGTGATCATAGCTCACTGCCGTCCTTGAACTCTCAGACTCACGTGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS GCA 72 bp TGGTCTGCCCACTTAACTCCTCTGGAACCTCATAGATaGCAAAGCCGATGGTGTGCATGTCCTCGCCCATCT +
Preference number: 6 (lower is better)
Translates to: WSAHLTPLEPHR*QSRWCACPRPS
Trigger: AGATGGGCGAGGACATGCACACCATCGGCTTTGGCATCTATGAGGTTCCAGAGGAGTTAAGTGGGCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS GCA 72 bp TCTTGGCGCTTTGCTAGAACCCTTCTCAGGATGGTCTaGAGCTCAAAGGCAGAGATCTCCGCATCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SWRFARTLLRMV*SSKAEISASSP
Trigger: AGGAGAGGATGCGGAGATCTCTGCCTTTGAGCTGCAGACCATCCTGAGAAGGGTTCTAGCAAAGCGCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000474026.5
ENST00000487223.5
CDS GCA 72 bp GGTAGGATAGTAGGAGGCACCGTCCTAGCCGTGGACTaGTGGAGCTGGGATTGCTATACGACAGAAAGACAT +
Preference number: 6 (lower is better)
Translates to: GRIVGGTVLAVD*WSWDCYTTERH
Trigger: ATGTCTTTCTGTCGTATAGCAATCCCAGCTCCAGCAGTCCACGGCTAGGACGGTGCCTCCTACTATCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS GCA 72 bp CTCCTCTGTGCTCCCGCGTTGTCTTCTAGTACAGTCTaGAGGGTTCACCTTTTCCCTGACTCAGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LLCAPALSSSTV*RVHLFPDSVFS
Trigger: GGAGAAGACTGAGTCAGGGAAAAGGTGAACCCTGCAGACTGTACTAGAAGACAACGCGGGAGCACAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS CCA 72 bp GTAGGAGGCACCGTCCTAGCCGTGGACTGCTGGAGCTaGGATTGCTATACGACAGAAAGACATACCTCGTAT +
Preference number: 6 (lower is better)
Translates to: VGGTVLAVDCWS*DCYTTERHTSY
Trigger: ATACGAGGTATGTCTTTCTGTCGTATAGCAATCCCAGCTCCAGCAGTCCACGGCTAGGACGGTGCCTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CCA 72 bp AGGATAGTAGGAGGCACCGTCCTAGCCGTGGACTGCTaGAGCTGGGATTGCTATACGACAGAAAGACATACC +
Preference number: 6 (lower is better)
Translates to: RIVGGTVLAVDC*SWDCYTTERHT
Trigger: GGTATGTCTTTCTGTCGTATAGCAATCCCAGCTCCAGCAGTCCACGGCTAGGACGGTGCCTCCTACTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CCA 72 bp TTCCTTGCAGTCAACAGAGGCCTTGTGATCAGAGTCTaGCTGGTGGGATGTGTGACCGGAAATGGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: FLAVNRGLVIRV*LVGCVTGNGLC
Trigger: ACACAGGCCATTTCCGGTCACACATCCCACCAGCCAGACTCTGATCACAAGGCCTCTGTTGACTGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 72 bp TGGGAATTGGGTCCTGGTCTCCTCTGTGCTCCCGCGTaGTCTTCTAGTACAGTCTGCAGGGTTCACCTTTTC +
Preference number: 6 (lower is better)
Translates to: WELGPGLLCAPA*SSSTVCRVHLF
Trigger: GAAAAGGTGAACCCTGCAGACTGTACTAGAAGACAACGCGGGAGCACAGAGGAGACCAGGACCCAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS TCA 72 bp CCTTGGACCAGGCATCCCATCTGCTTCAGCAAGCGGTaGCTGTGGGCCCAAATGCTCTCGCAAAATTTAAGT +
Preference number: 6 (lower is better)
Translates to: PWTRHPICFSKR*LWAQMLSQNLS
Trigger: ACTTAAATTTTGCGAGAGCATTTGGGCCCACAGTCACCGCTTGCTGAAGCAGATGGGATGCCTGGTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS TCA 72 bp GCTCCCTGGCGCGATTCGTCAGGAAGAAGTTTTTGCTaGGGTGGATGTTGGTCTGCCCACTTAACTGAGGAA +
Preference number: 6 (lower is better)
Translates to: APWRDSSGRSFC*GGCWSAHLTEE
Trigger: TTCCTCAGTTAAGTGGGCAGACCAACATCCACCTCAGCAAAAACTTCTTCCTGACGAATCGCGCCAGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS GCA 72 bp GGCACCGTCCTAGCCGTGGACTGCTGGAGCTGGGATTaGTATACGACAGAAAGACATACCTCGTATAAACCA +
Preference number: 6 (lower is better)
Translates to: GTVLAVDCWSWD*YTTERHTSYKP
Trigger: TGGTTTATACGAGGTATGTCTTTCTGTCGTATAGCAATCCCAGCTCCAGCAGTCCACGGCTAGGACGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS GCA 72 bp AAAACACAAATGCCTGCTGAGGAACTCGGAAGCACATaGCCACAGGGGTTTCACATCCATTCAGCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: KTQMPAEELGST*PQGFHIHSAPP
Trigger: AGGCGGAGCTGAATGGATGTGAAACCCCTGTGGGCATGTGCTTCCGAGTTCCTCAGCAGGCATTTGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CCA 72 bp CTCTCAGGCAGGAACAGCGTCCACATGGCAGGAACCTaGCTCGGTTCTACGTGGTGTATGATGCACTATAAA +
Preference number: 6 (lower is better)
Translates to: LSGRNSVHMAGT*LGSTWCMMHYK
Trigger: TTTATAGTGCATCATACACCACGTAGAACCGAGCCAGGTTCCTGCCATGTGGACGCTGTTCCTGCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CAA 90 bp GAGCAGCCAAGGAGAGAGCCTTTTTGCAGAGCTTTCTGGATGATCTaGAACAGGTTGGGAGGGGGCTTCTTCAACTCATACCACTCAGCA +
Preference number: 6 (lower is better)
Translates to: EQPRREPFCRAFWMI*NRLGGGFFNSYHSA
Trigger: TGCTGAGTGGTATGAGTTGAAGAAGCCCCCTCCCAACCTGTTCAAGATCATCCAGAAAGCTCTGCAAAAAGGCTCTCTCCTTGGCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS TCA 72 bp GGCAGGAGAAAGACAACCCAGCTTCTAAACCAAGCATaGTCCACCGGACCAAGGCTGGAGCAGCATCTAAAA +
Preference number: 6 (lower is better)
Translates to: GRRKTTQLLNQA*STGPRLEQHLK
Trigger: TTTTAGATGCTGCTCCAGCCTTGGTCCGGTGGATCATGCTTGGTTTAGAAGCTGGGTTGTCTTTCTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS TCA 72 bp TGGCAAGTTACCTCCCTAGTATGTGCTGAGTGGGGATaGAGTTTTTCCAGCTCTGTGCCTCTAGTTTGGCCG +
Preference number: 6 (lower is better)
Translates to: WQVTSLVCAEWG*SFSSSVPLVWP
Trigger: CGGCCAAACTAGAGGCACAGAGCTGGAAAAACTTCATCCCCACTCAGCACATACTAGGGAGGTAACTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000498027.5
CDS CCA 72 bp ATCTTCATGCCGTCTGGTCAGCCTTTCCCTCTCCTCTaGGTCTATAGTGTTCCAGCTTGGGCAGTTGTCATT +
Preference number: 6 (lower is better)
Translates to: IFMPSGQPFPLL*VYSVPAWAVVI
Trigger: AATGACAACTGCCCAAGCTGGAACACTATAGACCCAGAGGAGAGGGAAAGGCTGACCAGACGGCATGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CAA 72 bp GATGAGCTGGTCATCTGCAAACCGAGCAACGATGACTaGGTGGAGTTGACAGGGCATCTTGAAACCTGCTTC +
Preference number: 6 (lower is better)
Translates to: DELVICKPSNDD*VELTGHLETCF
Trigger: GAAGCAGGTTTCAAGATGCCCTGTCAACTCCACCAAGTCATCGTTGCTCGGTTTGCAGATGACCAGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000472601.5
ENST00000474026.5
ENST00000487223.5
ENST00000492664.5
ENST00000498027.5
CDS CAA 72 bp AAAGTGCCCCGTGTGTCTACTTTAATAATCGTGACCTaGGACCAGGCATCCCATCTGCTTCAGCAAGCGGTG +
Preference number: 6 (lower is better)
Translates to: KVPRVSTLIIVT*DQASHLLQQAV
Trigger: CACCGCTTGCTGAAGCAGATGGGATGCCTGGTCCAAGGTCACGATTATTAAAGTAGACACACGGGGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CAA 90 bp CCCAGCTTGCCACTCCCGTCCGAATCTAGCATGTCAACCATAATTTaGCATGTCTCGATGCTGAAGCCATCTGACTTGATATCTTGGCGC +
Preference number: 6 (lower is better)
Translates to: PSLPLPSESSMSTII*HVSMLKPSDLISWR
Trigger: GCGCCAAGATATCAAGTCAGATGGCTTCAGCATCGAGACATGCAAAATTATGGTTGACATGCTAGATTCGGACGGGAGTGGCAAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000474026.5
ENST00000487223.5
CDS GCA 72 bp AAGTCACTGAAAGACATCCAGAATTCTCCATCTTCATaGCGTCTGGTCAGCCTTTCCCTCTCCTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: KSLKDIQNSPSS*RLVSLSLSSGS
Trigger: AGACCCAGAGGAGAGGGAAAGGCTGACCAGACGGCATGAAGATGGAGAATTCTGGATGTCTTTCAGTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295006.6
ENST00000433674.6
CDS CCA 72 bp AGCGTCCACATGGCAGGAACCTGGCTCGGTTCTACGTaGTGTATGATGCACTATAAAAGCAAAGACAGGACT +
Preference number: 6 (lower is better)
Translates to: SVHMAGTWLGST*CMMHYKSKDRT
Trigger: AGTCCTGTCTTTGCTTTTATAGTGCATCATACACCACGTAGAACCGAGCCAGGTTCCTGCCATGTGGACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CCA 72 bp AAGTGCATTGTGGGATCTTACAACCGGTTACAGGCCTaGCCCCGACAGACCAAGAGCTCTTTAAAGCAAAAC +
Preference number: 6 (lower is better)
Translates to: KCIVGSYNRLQA*PRQTKSSLKQN
Trigger: GTTTTGCTTTAAAGAGCTCTTGGTCTGTCGGGGCCAGGCCTGTAACCGGTTGTAAGATCCCACAATGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS TCA 72 bp TCATCTGCAAACCGAGCAACGATGACTTGGTGGAGTTaGCAGGGCATCTTGAAACCTGCTTCTTCTAATGCC +
Preference number: 6 (lower is better)
Translates to: SSANRATMTWWS*QGILKPASSNA
Trigger: GGCATTAGAAGAAGCAGGTTTCAAGATGCCCTGTCAACTCCACCAAGTCATCGTTGCTCGGTTTGCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000472601.5
ENST00000474026.5
ENST00000487223.5
ENST00000492664.5
ENST00000498027.5
CDS GCA 72 bp CTAAAAGAGCCCGATGTGCTACCGGTTGCACTGCCTTaGTGTGAAAGAAATGTACTACAGGTGGGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: LKEPDVLPVALP*CERNVLQVGQS
Trigger: ACTTTGACCCACCTGTAGTACATTTCTTTCACAGCAAGGCAGTGCAACCGGTAGCACATCGGGCTCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CAA 90 bp CCCAACACAGATCCACCCGCATCTCTGGGATCTTACTTGGTATTTTaGAATCTTCGTCCAGAGAATGTAGAACTCCTTCAGCCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: PNTDPPASLGSYLVF*NLRPENVELLQPQL
Trigger: AAGCTGGGGCTGAAGGAGTTCTACATTCTCTGGACGAAGATTCAAAAATACCAAGTAAGATCCCAGAGATGCGGGTGGATCTGTGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS TCA 72 bp GCTTTGCTGGTCTACCACTCGCTTGTGTCCTTTTATTaGTATCCAATTCTGCTAGGGTCTTACCCTAAGGGC +
Preference number: 6 (lower is better)
Translates to: ALLVYHSLVSFY*YPILLGSYPKG
Trigger: GCCCTTAGGGTAAGACCCTAGCAGAATTGGATATCAATAAAAGGACACAAGCGAGTGGTAGACCAGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS GCA 72 bp ACACATTTGTTCCCAAAGCCCAGCAGTCTCCTGCTTTaGTGGTCTACCACTCGCTTGTGTCCTTTTATTGAT +
Preference number: 6 (lower is better)
Translates to: THLFPKPSSLLL*WSTTRLCPFID
Trigger: ATCAATAAAAGGACACAAGCGAGTGGTAGACCAGCAAAGCAGGAGACTGCTGGGCTTTGGGAACAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CCA 72 bp GACTGGAGCCAGGTGATAATGGAAGTATACCCCACCTaGCTTCTTTCTTTCAGTGAGAGAACTTCCTGTCAT +
Preference number: 6 (lower is better)
Translates to: DWSQVIMEVYPT*LLSFSERTSCH
Trigger: ATGACAGGAAGTTCTCTCACTGAAAGAAAGAAGCCAGGTGGGGTATACTTCCATTATCACCTGGCTCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS CAA 90 bp GAGACTGGTTTGATTTTGCAAAGCCAGTACCTTCTGCTGTTTCTTTaGTTTTTGAACTGTCCACCTTCACCCTGCCTGTGTCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: ETGLILQSQYLLLFL*FLNCPPSPCLCPLL
Trigger: CAGCAAAGGACACAGGCAGGGTGAAGGTGGACAGTTCAAAAACAAAAGAAACAGCAGAAGGTACTGGCTTTGCAAAATCAAACCAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 90 bp TTCATTTTTCTAAGCATGATCCTGCAGCCACTCCTTAGTTTAACCTaGAGCTACACTCAAGTCAAAGCTCATGAGAAGAGGGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: FIFLSMILQPLLSLT*SYTQVKAHEKREPG
Trigger: GCCTGGCTCCCTCTTCTCATGAGCTTTGACTTGAGTGTAGCTCAAGGTTAAACTAAGGAGTGGCTGCAGGATCATGCTTAGAAAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472601.5
ENST00000492664.5
ENST00000498027.5
CDS GCA 72 bp TCGAGCTCTATTGTTCCAGTATTCTCGGGATCCAGCTaGTTAAATATCTTGAATAGCGTTTCCAGCCGAACC +
Preference number: 6 (lower is better)
Translates to: SSSIVPVFSGSS*LNILNSVSSRT
Trigger: GGTTCGGCTGGAAACGCTATTCAAGATATTTAAGCAGCTGGATCCCGAGAATACTGGAACAATAGAGCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000463997.1
ENST00000472601.5
ENST00000474026.5
ENST00000487223.5
ENST00000492664.5
ENST00000498027.5
CDS CAA 72 bp CCACTCCCGTCCGAATCTAGCATGTCAACCATAATTTaGCATGTCTCGATGCTGAAGCCATCTGACTTGATA +
Preference number: 6 (lower is better)
Translates to: PLPSESSMSTII*HVSMLKPSDLI
Trigger: TATCAAGTCAGATGGCTTCAGCATCGAGACATGCAAAATTATGGTTGACATGCTAGATTCGGACGGGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000474026.5
ENST00000487223.5
CDS CAA 72 bp CTAAGCATGATCCTGCAGCCACTCCTTAGTTTAACCTaGAGCTACACTCAAGTCAAAGCTCATGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LSMILQPLLSLT*SYTQVKAHEKR
Trigger: CCTCTTCTCATGAGCTTTGACTTGAGTGTAGCTCAAGGTTAAACTAAGGAGTGGCTGCAGGATCATGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472601.5
ENST00000492664.5
ENST00000498027.5
CDS CAA 72 bp ACTCTGAGCTTCATTATGGGTAAAATCCCAATCCCCTaGGAAATGTTTCTCCACTCTGTGCAGGAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: TLSFIMGKIPIP*EMFLHSVQELL
Trigger: CAGCAACTCCTGCACAGAGTGGAGAAACATTTCCAAGGGGATTGGGATTTTACCCATAATGAAGCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS CAA 72 bp ATAGGCCATTTCACCTGCGAAGTCCTGGTTGGTTTTTaGTTTGCATTTCCTCAGCCCCATCTTTACTCACTC +
Preference number: 6 (lower is better)
Translates to: IGHFTCEVLVGF*FAFPQPHLYSL
Trigger: GAGTGAGTAAAGATGGGGCTGAGGAAATGCAAACAAAAAACCAACCAGGACTTCGCAGGTGAAATGGCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS CAA 90 bp ACACTCAAGTCAAAGCTCATGAGAAGAGGGAGCCAGGCGTGCATTTaGGACTTGAGAATAGGTGGTTGGAAAACAACTGCAAGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: TLKSKLMRRGSQACI*DLRIGGWKTTASKS
Trigger: ACTTTTACTTGCAGTTGTTTTCCAACCACCTATTCTCAAGTCCAAAATGCACGCCTGGCTCCCTCTTCTCATGAGCTTTGACTTGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS CCA 72 bp TTGCACTGCCTTGCTGTGAAAGAAATGTACTACAGGTaGGTCAAAGTGCCCCGTGTGTCTACTTTAATAATC +
Preference number: 6 (lower is better)
Translates to: LHCLAVKEMYYR*VKVPRVSTLII
Trigger: GATTATTAAAGTAGACACACGGGGCACTTTGACCCACCTGTAGTACATTTCTTTCACAGCAAGGCAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474026.5
ENST00000487223.5
CDS CAA 72 bp GATCCACCCGCATCTCTGGGATCTTACTTGGTATTTTaGAATCTTCGTCCAGAGAATGTAGAACTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: DPPASLGSYLVF*NLRPENVELLQ
Trigger: CTGAAGGAGTTCTACATTCTCTGGACGAAGATTCAAAAATACCAAGTAAGATCCCAGAGATGCGGGTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS CAA 90 bp AGAATGTTTCCCAACACAGATCCACCCGCATCTCTGGGATCTTACTaGGTATTTTTGAATCTTCGTCCAGAGAATGTAGAACTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: RMFPNTDPPASLGSY*VFLNLRPENVELLQ
Trigger: CTGAAGGAGTTCTACATTCTCTGGACGAAGATTCAAAAATACCAAGTAAGATCCCAGAGATGCGGGTGGATCTGTGTTGGGAAACATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS GCA 72 bp CCTTGGAAATGTTTCTCCACTCTGTGCAGGAGTTGCTaGATCTTAAAGCATATGAACAGAATGTTTCCCAAC +
Preference number: 6 (lower is better)
Translates to: PWKCFSTLCRSC*ILKHMNRMFPN
Trigger: GTTGGGAAACATTCTGTTCATATGCTTTAAGATGCAGCAACTCCTGCACAGAGTGGAGAAACATTTCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS CCA 72 bp AAACACCGAACAAAATTATCAAAATCGATGATGAGCTaGTCATCTGCAAACCGAGCAACGATGACTTGGTGG +
Preference number: 6 (lower is better)
Translates to: KHRTKLSKSMMS*SSANRATMTWW
Trigger: CCACCAAGTCATCGTTGCTCGGTTTGCAGATGACCAGCTCATCATCGATTTTGATAATTTTGTTCGGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000463997.1
ENST00000472601.5
ENST00000474026.5
ENST00000487223.5
ENST00000492664.5
ENST00000498027.5
CDS CAA 72 bp TTGATTTTGCAAAGCCAGTACCTTCTGCTGTTTCTTTaGTTTTTGAACTGTCCACCTTCACCCTGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: LILQSQYLLLFL*FLNCPPSPCLC
Trigger: ACACAGGCAGGGTGAAGGTGGACAGTTCAAAAACAAAAGAAACAGCAGAAGGTACTGGCTTTGCAAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 90 bp TCTTTACTCACTCTGAGCTTCATTATGGGTAAAATCCCAATCCCCTaGGAAATGTTTCTCCACTCTGTGCAGGAGTTGCTGCATCTTAAA +
Preference number: 6 (lower is better)
Translates to: SLLTLSFIMGKIPIP*EMFLHSVQELLHLK
Trigger: TTTAAGATGCAGCAACTCCTGCACAGAGTGGAGAAACATTTCCAAGGGGATTGGGATTTTACCCATAATGAAGCTCAGAGTGAGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474026.5
CDS GCA 72 bp AACAAAATTATCAAAATCGATGATGAGCTGGTCATCTaGAAACCGAGCAACGATGACTTGGTGGAGTTGACA +
Preference number: 6 (lower is better)
Translates to: NKIIKIDDELVI*KPSNDDLVELT
Trigger: TGTCAACTCCACCAAGTCATCGTTGCTCGGTTTGCAGATGACCAGCTCATCATCGATTTTGATAATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000463997.1
ENST00000472601.5
ENST00000474026.5
ENST00000487223.5
ENST00000492664.5
ENST00000498027.5
CDS GCA 72 bp TGTTTTCTTGCCTGTTTCTGTTCTCATGGTCACAGTTaGTTCATGTTGTTAACCATGCTGCTGCTGTTTGAT +
Preference number: 6 (lower is better)
Translates to: CFLACFCSHGHS*FMLLTMLLLFD
Trigger: ATCAAACAGCAGCAGCATGGTTAACAACATGAAGCAACTGTGACCATGAGAACAGAAACAGGCAAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CCA 72 bp TGGCTTCTTTCTTTCAGTGAGAGAACTTCCTGTCATTaGGATGACACGAGAACATTTTACGCTTTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: WLLSFSERTSCH*DDTRTFYALLF
Trigger: AAAAAGCAAAGCGTAAAATGTTCTCGTGTCATCCCAATGACAGGAAGTTCTCTCACTGAAAGAAAGAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498027.5
CDS CAA 90 bp AACCTGAAGTTACATGAACAAACAAACTCATTGCTAAGCATTAGATaGTTCCATTTAGCTGCGCTCACAGGCTATGAAACTAATGTGGTG +
Preference number: 6 (lower is better)
Translates to: NLKLHEQTNSLLSIR*FHLAALTGYETNVV
Trigger: CACCACATTAGTTTCATAGCCTGTGAGCGCAGCTAAATGGAACAATCTAATGCTTAGCAATGAGTTTGTTTGTTCATGTAACTTCAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS TCA 72 bp AAGTCTTCAGGCAGATTAGTTATAACTTCAAAGTACTaGGAAACAGAGCCAAGAGATAAGGTCGAGCTCTAT +
Preference number: 6 (lower is better)
Translates to: KSSGRLVITSKY*ETEPRDKVELY
Trigger: ATAGAGCTCGACCTTATCTCTTGGCTCTGTTTCTCAGTACTTTGAAGTTATAACTAATCTGCCTGAAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295006.6
ENST00000433674.6
ENST00000463997.1
ENST00000474026.5
ENST00000487223.5
CDS CAA 72 bp TTACATGAACAAACAAACTCATTGCTAAGCATTAGATaGTTCCATTTAGCTGCGCTCACAGGCTATGAAACT +
Preference number: 6 (lower is better)
Translates to: LHEQTNSLLSIR*FHLAALTGYET
Trigger: AGTTTCATAGCCTGTGAGCGCAGCTAAATGGAACAATCTAATGCTTAGCAATGAGTTTGTTTGTTCATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463997.1
CDS CAA 72 bp TCCTGTCATTGGGATGACACGAGAACATTTTACGCTTaGCTTTTTGTGAAATTAGCATACCCACTTAATTCA +
Preference number: 6 (lower is better)
Translates to: SCHWDDTRTFYA*LFVKLAYPLNS
Trigger: TGAATTAAGTGGGTATGCTAATTTCACAAAAAGCAAAGCGTAAAATGTTCTCGTGTCATCCCAATGACAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498027.5