RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN12 (Homo sapiens)

Ensembl gene IDs: ENSG00000182472

Ensembl transcript IDs: ENST00000328867.9, ENST00000593700.5, ENST00000594497.1, ENST00000594552.5, ENST00000595177.1, ENST00000597354.1, ENST00000597716.1, ENST00000597740.1, ENST00000597987.5, ENST00000598684.5, ENST00000601685.1, ENST00000601953.5

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTaGAGGTGGGCTGATGGCCTGGCTGCCTGGTGGTTGATGGTTTTG +
Preference number: 1 (lower is better)
Translates to: LRVCVGRGSLGTLQR*RWADGLAAWWLMVL
Trigger: CAAAACCATCAACCACCAGGCAGCCAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR TCA 90 bp TGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGCCCGGCCGTGAGCAGTaGGGGCCAGAGACTAGCCCC +
Preference number: 2 (lower is better)
Translates to: CPGPLLMLLRVCVGRGSLPGREQ*GPETSP
Trigger: GGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGG...CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR TCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMAVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR GCA 90 bp TGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 2 (lower is better)
Translates to: CPGPLLMLLRVCVGRGSLLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR GCA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGGCCTGCTGCATTCAGTaGCAGCCTCAGCTCGTAGGA +
Preference number: 2 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGACCIQ*QPQLVG
Trigger: TCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGC...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR TCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 2 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPESATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR TCA 90 bp GTAGCCATGCTGGAAATCCTGTCCAGGAGGGACCACCCGGCGCAGGAGCCGGGGTTACCCAGGCTCCCCTaGCACACGTCTGTGCGGCTC +
Preference number: 2 (lower is better)
Translates to: VAMLEILSRRDHPAQEPGLPRLP*HTSVRL
Trigger: GAGCCGCACAGACGTGTGTCAGGGGAGCCTGGGTAA...CCCCGGCTCCTGCGCCGGGTGGTCCCTCCTGGACAGGATTTCCAGCATGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597740.1
3UTR-3UTR GCA 90 bp ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGATGCTCCTCCGGGTCTaGGTCGGGCGTGGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: IADSLPGPLADAPPGLRRMLLRV*VGRGSL
Trigger: CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT...CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR GCA 90 bp TGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCTCACCCCCATCCAGGTaGTGGCTGCAGTGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: CVGRGSLGTLQRWRWADGSPPSR*WLQWQK
Trigger: CTTCTGCCACTGCAGCCAGCACCTGGATGGGGGTGA...GCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR CAA 90 bp CAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGTGGTCTaGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAG +
Preference number: 2 (lower is better)
Translates to: QREWHPCQARPREVV*LSNPALSSRCAHPE
Trigger: CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR TCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: PETSPRQVDARESGTHARVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR GCA 90 bp TGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGCTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: CPGPLLMLLRVCVGRGSLLARVI*SRRAVA
Trigger: AGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAG...CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR GCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 2 (lower is better)
Translates to: PQTGGCQREWHPCQARPRLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR GCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 2 (lower is better)
Translates to: GPETSPRQVDARESGTHALAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp ATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGGATGGCCTGGCTGCCTaGTGGTTGATGGTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: ILCPGPLLMLLRVCVGRGDGLAA*WLMVLL
Trigger: GAGCAAAACCATCAACCACCAGGCAGCCAGGCCATC...CCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CCA 90 bp GATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGATGGCCTGGCTGCCTaGTGGTTGATGGTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: DAPPGLRRAWVSGDPPEVDGLAA*WLMVLL
Trigger: GAGCAAAACCATCAACCACCAGGCAGCCAGGCCATC...CACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGTCGGGCGTGGGTCTCTaGGGACCCTCCAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: EDIADSLPGPLADAPPGLSGVGL*GPSRGG
Trigger: TCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGA...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CCA 90 bp TCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGAGGTGCTGGCTGCAGTaGCAGAAGATGCAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: SASGVGLWGPSRGGGGLMRCWLQ*QKMQVR
Trigger: CCTCACCTGCATCTTCTGCCACTGCAGCCAGCACCT...CATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR CCA 90 bp ATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGGATCCTAGGAGAAGGTaGCCACCTCCATCCACTGTC +
Preference number: 2 (lower is better)
Translates to: MLLRVCVGRGSLGTLQRWDPRRR*PPPSTV
Trigger: GACAGTGGATGGAGGTGGCCACCTTCTCCTAGGATC...CCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR TCA 90 bp ATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: ILCPGPLLMLLRVCVGRGVLVSE*GVRRPE
Trigger: CTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAAC...CCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR GCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 2 (lower is better)
Translates to: QTGGCQREWHPCQARPRELAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCCTTAAGCTGTCAACGTaGACTAGCTCGTGTCATCTG +
Preference number: 2 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMALKLST*TSSCHL
Trigger: CAGATGACACGAGCTAGTCCACGTTGACAGCTTAAG...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR GCA 90 bp AGCCATGCTGGAAATCCTGTCCAGGAGGGACCACCCGGCGCAGGAGCCGGGGATCCTGACACACGTCTGTaGGGCTCATGTCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: SHAGNPVQEGPPGAGAGDPDTRL*GSCLHR
Trigger: TCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGG...ATCCCCGGCTCCTGCGCCGGGTGGTCCCTCCTGGACAGGATTTCCAGCATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
3UTR-3UTR TCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 2 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCSATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCGGATGCCAGAGAGAGTaGCACCCATGCCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSGCQRE*HPCQAR
Trigger: CCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCC...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp TCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGCTTAAGCTGTCAACGTaGACTAGCTCGTGTCATCTG +
Preference number: 2 (lower is better)
Translates to: SASGVGLWGPSRGGGGLMLKLST*TSSCHL
Trigger: CAGATGACACGAGCTAGTCCACGTTGACAGCTTAAG...CATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CCA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTGGTCTGCGTCGGGCGTaGGTCTCTGGGGACCCTCCA +
Preference number: 2 (lower is better)
Translates to: SHNEDIADSLPGPLADAPGLRRA*VSGDPP
Trigger: TGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACC...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR TCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 2 (lower is better)
Translates to: GRASTVLSCQRGLARVICSATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACGGATGCCAGAGAGAGTaGCACCCATGCCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHGCQRE*HPCQAR
Trigger: CCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCC...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR TCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 2 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYSATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR TCA 90 bp CTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATGCCCGGGCCCCTTGCTaGTGCTCCTCCGGGTCTGCG +
Preference number: 2 (lower is better)
Translates to: LATYLCRLSCSHNEDIADARAPC*CSSGSA
Trigger: CGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGC...ATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
3UTR-3UTR CCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGGGTCTGGGTCAGCTaGTTGTTCAGGTGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSRVWVS*LFRWKP
Trigger: AGGCTTCCACCTGAACAACCAGCTGACCCAGACCCT...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR GCA 90 bp TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCCAGGGCAGAGCTAGCACTGCTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: FSCVCPPPSRRARAELALLARVI*SRRAVA
Trigger: AGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAG...CAGTGCTAGCTCTGCCCTGGCTCTCCTAGAAGGTGGAGGACAGACACAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTGGCCTGGCTGCCTGGTaGTTGATGGTTTTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: SHNEDIADSLPGPLADAPGLAAW*LMVLLP
Trigger: GGGGAGCAAAACCATCAACCACCAGGCAGCCAGGCC...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCGATGGCCTGGCTGCCTaGTGGTTGATGGTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: GRASTVLSCQRGLARVICDGLAA*WLMVLL
Trigger: GAGCAAAACCATCAACCACCAGGCAGCCAGGCCATC...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CCA 90 bp ACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCTGGGGACCCTCCAGAGGTaGAGGTGGGCTGATGGCCTG +
Preference number: 2 (lower is better)
Translates to: TYLCRLSCSHNEDIADSLGTLQR*RWADGL
Trigger: CAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCC...CAGAGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
3UTR-3UTR TCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCVLVSE*GVRRPE
Trigger: CTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAAC...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTGTACGCAGGCCAGAGTaGTCACCCGGCCGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFVRRPE*SPGREQ
Trigger: CTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTAC...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CCA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATCGGGCGTGGGTCTCTaGGGACCCTCCAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: YINIYSPSNISLPSLLLSSGVGL*GPSRGG
Trigger: TCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGA...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
3UTR-3UTR GCA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCACCCCAGACAGGTGGATaGCAGAGAGAGTGGCACCCA +
Preference number: 2 (lower is better)
Translates to: YINIYSPSNISLPSLLLSPQTGG*QREWHP
Trigger: TGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
3UTR-3UTR GCA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCACATCCAGGTGCTGGCTaGAGTGGCAGAAGATGCAGG +
Preference number: 2 (lower is better)
Translates to: YINIYSPSNISLPSLLLSHPGAG*SGRRCR
Trigger: CCTGCATCTTCTGCCACTGCAGCCAGCACCTGGATG...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR CCA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATCCATCCACTGTCTGTaGGTCAGGCAGATGACCCCC +
Preference number: 2 (lower is better)
Translates to: YINIYSPSNISLPSLLLSSIHCL*VRQMTP
Trigger: GGGGGTCATCTGCCTGACCCACAGACAGTGGATGGA...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR CCA 90 bp ATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGCTCGTAGGAGTTCATaGTTCCAGAGGTGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: IYIHLATYLCRLSCSHNEARRSS*FQRCPH
Trigger: ATGAGGACACCTCTGGAACCATGAACTCCTACGAGC...TTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR GCA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCACTAGCAACATATCTCTaGCGTCTCTCCTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: YINIYSPSNISLPSLLLSLATYL*RLSCSH
Trigger: ATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAG...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
3UTR GCA 72 bp CTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTaGGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: LCPGPLLMLLRV*VGRGSLGTLQR
Trigger: CCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR CCA 72 bp CCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTaGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: PLADAPPGLRRA*VSGDPPEVEVG
Trigger: GCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR CCA 72 bp TGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTaGAGGTGGGCTGATGGCCTGGCTGCCTGGTGGTTG +
Preference number: 3 (lower is better)
Translates to: CVGRGSLGTLQR*RWADGLAAWWL
Trigger: CAACCACCAGGCAGCCAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CAA 90 bp CCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCTGGCTGCCTGGTGGTaGATGGTTTTGCTCCCCCTA +
Preference number: 3 (lower is better)
Translates to: PLADAPPGLRRAWVSGDPLAAWW*MVLLPL
Trigger: TAGGGGGAGCAAAACCATCAACCACCAGGCAGCCAG...AGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR TCA 72 bp TGGCCACCTCCATCCACTGTCTGTGGGTCAGGCAGATaGCCCCCTCACCCCCATCCAGGTGCTGGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: WPPPSTVCGSGR*PPHPHPGAGCS
Trigger: ACTGCAGCCAGCACCTGGATGGGGGTGAGGGGGTCATCTGCCTGACCCACAGACAGTGGATGGAGGTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR GCA 72 bp GTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTaGGCCCATCCGGAGATCCTAGGAGAAGGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: VVLLSNPALSSR*AHPEILGEGGH
Trigger: GTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR-3UTR CAA 90 bp ATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGGGGCTGTCGCTGTTCTaGTTTCTGAGTGAGGAGTAC +
Preference number: 3 (lower is better)
Translates to: ILCPGPLLMLLRVCVGRGGLSLF*FLSEEY
Trigger: GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC...CCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
3UTR-3UTR CAA 90 bp GACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTGTCTGGGTCAGCTGGTaGTTCAGGTGGAAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: DIADSLPGPLADAPPGLRVWVSW*FRWKPA
Trigger: AGCAGGCTTCCACCTGAACAACCAGCTGACCCAGAC...ACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594552.5
3UTR GCA 72 bp CAGGAGCCGGGGATACAGAGTAAGGGAGGCGGCAGCTaGAAGGAACCAGCAGTTACCCAGGCTCCCCTGACA +
Preference number: 3 (lower is better)
Translates to: QEPGIQSKGGGS*KEPAVTQAPLT
Trigger: TGTCAGGGGAGCCTGGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCGGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597740.1
3UTR CCA 72 bp GTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTaGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: VSSEGQRLAPDR*MPERVAPMPGK
Trigger: CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
3UTR TCA 72 bp TGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGT +
Preference number: 3 (lower is better)
Translates to: CSRRAVAVLVSE*GVRRPEWSPGR
Trigger: ACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CAA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCGGGCTGTCGCTGTTCTaGTTTCTGAGTGAGGAGTAC +
Preference number: 3 (lower is better)
Translates to: GRASTVLSCQRGLARVICGLSLF*FLSEEY
Trigger: GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR GCA 72 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: VLSCQRGLARVI*SRRAVAVLVSE
Trigger: CTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR-3UTR CAA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCACTGGCTGCCTGGTGGTaGATGGTTTTGCTCCCCCTA +
Preference number: 3 (lower is better)
Translates to: YINIYSPSNISLPSLLLSLAAWW*MVLLPL
Trigger: TAGGGGGAGCAAAACCATCAACCACCAGGCAGCCAG...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
3UTR GCA 72 bp TATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTaGTCTCATAATGAAGACATAGCCGATTCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: YIHLATYLCRLS*SHNEDIADSLP
Trigger: GGGCAGAGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR TCA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp GAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGGGCTCCCGCCGGAGTTaGAGCCACGCACCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: EVVLLSNPALSSRCAHPEGSRRS*SHAPSG
Trigger: GCCGCTGGGTGCGTGGCTTCAACTCCGGCGGGAGCC...CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCGCTGCTCACAGGTCCTaGGCCCGATCTCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMAAAHRS*ARSLWG
Trigger: CCCCCAGAGAGATCGGGCTCAGGACCTGTGAGCAGC...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGGCCCGGGCCCCTTGCTaGTGCTCCTCCGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMARAPC*CSSGSA
Trigger: CGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGC...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCTGTGGGTCAGGCAGATaGCCCCCTCACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMACGSGR*PPHPHP
Trigger: TGGATGGGGGTGAGGGGGTCATCTGCCTGACCCACA...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCCGGCCGTGAGCAGTaGGGGCCAGAGACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMPGREQ*GPETSP
Trigger: GGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGG...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCGCCCTGAGCAGCAGGTaGGCCCATCCGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMAALSSR*AHPEIL
Trigger: TAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGC...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp TCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGCCACGAGGGACTCCTTaGCCAGGGCATGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SASGVGLWGPSRGGGGLMPRGTP*PGHGAG
Trigger: CCCTGCGCCATGCCCTGGCCAAGGAGTCCCTCGTGG...CATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp TCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGCACCAGGTAGTGGCCTaGACGCAGGCAGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SASGVGLWGPSRGGGGLMHQVVA*TQAAAA
Trigger: CGCCGCTGCTGCCTGCGTCCAGGCCACTACCTGGTG...CATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp ATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGGGGACCCTCCAGAGGTaGAGGTGGGCTGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: ILCPGPLLMLLRVCVGRGGTLQR*RWADGL
Trigger: CAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCC...CCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAAT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGCCCGGCCGTGAGCAGTaGGGGCCAGAGACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRPGREQ*GPETSP
Trigger: GGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGG...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCTCACCCCCATCCAGGTaGTGGCTGCAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMASPPSR*WLQWQK
Trigger: CTTCTGCCACTGCAGCCAGCACCTGGATGGGGGTGA...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp ATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: ILCPGPLLMLLRVCVGRGLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp TGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGATGGTTTGGGGTGCTaGGGAGCAGGGACGCCTCTT +
Preference number: 4 (lower is better)
Translates to: CPGPLLMLLRVCVGRGSLDGLGC*GAGTPL
Trigger: AAGAGGCGTCCCTGCTCCCCAGCACCCCAAACCATC...CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGTCCATTTCACGCCTTTaGCCTTCTCCGAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGSISRL*PSPSPA
Trigger: GGCCGGACTCGGAGAAGGCCAAAGGCGTGAAATGGA...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp GAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGCTGGGGGTGGAGGTATaGGCCCTGGCAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EVVLLSNPALSSRCAHPELGVEV*ALAGSR
Trigger: CCTGGAGCCTGCCAGGGCCCATACCTCCACCCCCAG...CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACCCGGCCGTGAGCAGTaGGGGCCAGAGACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLPGREQ*GPETSP
Trigger: GGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GPETSPRQVDARESGTHAVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGCGGCTGGTGAGGGTCTaGGTCAGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: MLLRVCVGRGSLGTLQRWRLVRV*VSWLFR
Trigger: CCTGAACAACCAGCTGACCCAGACCCTCACCAGCCG...CCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp CCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTGGATGCCAGAGAGAGTaGCACCCATGCCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PLADAPPGLRRAWVSGDPGCQRE*HPCQAR
Trigger: CCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCC...AGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp GAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGGTACGCAGGCCAGAGTaGTCACCCGGCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EVVLLSNPALSSRCAHPEVRRPE*SPGREQ
Trigger: CTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTAC...CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp TCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCTGGGGCCTGGCTGCCTGGTaGTTGATGGTTTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGVGLWGPSRGGGGLMAWGLAAW*LMVLLP
Trigger: GGGGAGCAAAACCATCAACCACCAGGCAGCCAGGCC...CCAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATGGTCTGCGTCGGGCGTaGGTCTCTGGGGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDGLRRA*VSGDPP
Trigger: TGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACC...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCCCGGTAGCGGCTGGTaGGGGTCTGGGTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EDIADSLPGPLADAPPGLPGSGW*GSGSAG
Trigger: ACCAGCTGACCCAGACCCTCACCAGCCGCTACCGGG...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGTGTGGGTCAGGCAGATaGCCCCCTCACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPECGSGR*PPHPHP
Trigger: TGGATGGGGGTGAGGGGGTCATCTGCCTGACCCACA...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: GPETSPRQVDARESGTHASATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPREVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCGGGACAGAAGGACCGTaGACTTGGGCGTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGGTEGP*TWACGP
Trigger: GGGGCCGCACGCCCAAGTGCACGGTCCTTCTGTCCC...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCGCAGGAGCGCATGGCTaGGCGGGGAATCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGAGAHG*AGNPRG
Trigger: GCCTCTGGGATTCCCCGCGCAGCCATGCGCTCCTGC...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp GATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGCCTGCTGCATTCAGTaGCAGCCTCAGCTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: DAPPGLRRAWVSGDPPEVACCIQ*QPQLVG
Trigger: TCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGC...CACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp GGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTATGCTCCTCCGGGTCTaGGTCGGGCGTGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAQQPCPEQQVRPSGDPMLLRV*VGRGSL
Trigger: CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT...AGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
CDS-3UTR CCA 90 bp CACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGATCACTCAGGGCAGTaGCGCCCACGAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: HPAVSSEGQRLAPDRWMPDHSGQ*RPRGTP
Trigger: AGGAGTCCCTCGTGGGCGCCACTGCCCTGAGTGATC...TGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCATCGCGGCACTCGGTaGGGAGTGTGTCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: DIADSLPGPLADAPPGLRHRGTR*GVCPSV
Trigger: CACGCTGGGACACACTCCCCACCGAGTGCCGCGATG...ACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGCTGGGGGTGGAGGTATaGGCCCTGGCAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPRELGVEV*ALAGSR
Trigger: CCTGGAGCCTGCCAGGGCCCATACCTCCACCCCCAG...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCGATCTCTCTGGGGGTaGAGGTATGGGCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMRSLWG*RYGPWQ
Trigger: CTGCCAGGGCCCATACCTCCACCCCCAGAGAGATCG...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCTGGAGGTGCTGGCTGCAGTaGCAGAAGATGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGVGLWGPSRGGGGLMAWRCWLQ*QKMQVR
Trigger: CCTCACCTGCATCTTCTGCCACTGCAGCCAGCACCT...CCAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCGTACGCAGGCCAGAGTaGTCACCCGGCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPETSPRQVDARESGTHAVRRPE*SPGREQ
Trigger: CTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTAC...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGTACGCAGGCCAGAGTaGTCACCCGGCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRVRRPE*SPGREQ
Trigger: CTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTAC...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp TCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGGCCTGGCTGCCTGGTaGTTGATGGTTTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SASGVGLWGPSRGGGGLMGLAAW*LMVLLP
Trigger: GGGGAGCAAAACCATCAACCACCAGGCAGCCAGGCC...CATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGGTCTGCGTCGGGCGTaGGTCTCTGGGGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPREGLRRA*VSGDPP
Trigger: TGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACC...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATGAACCAGCAGTTACCTaGGCCCCGCGGCGAACCTGG +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDEPAVT*APRRTW
Trigger: CCAGGTTCGCCGCGGGGCCCAGGTAACTGCTGGTTC...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601953.5
CDS-3UTR TCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGGCCGGTTGCGCTGGATaGGGGACAGAAGGACCGTGC +
Preference number: 4 (lower is better)
Translates to: EDIADSLPGPLADAPPGLAGCAG*GTEGPC
Trigger: GCACGGTCCTTCTGTCCCTCATCCAGCGCAACCGGC...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCAGTAAGGCCTGGAGCTaGGAGGCATTGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMASKAWS*EALSSS
Trigger: GGAAGAACTCAATGCCTCTCAGCTCCAGGCCTTACT...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR TCA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGCCCGGTAGCGGCTGGTaGGGGTCTGGGTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKPGSGW*GSGSAG
Trigger: ACCAGCTGACCCAGACCCTCACCAGCCGCTACCGGG...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGTGTGGGTCAGGCAGATaGCCCCCTCACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRCGSGR*PPHPHP
Trigger: TGGATGGGGGTGAGGGGGTCATCTGCCTGACCCACA...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPRESATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARSATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp CAGGAGCCGGGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTTGGCCCCGAAAAAGCTaGAGGCGCCCGGCTCCGACC +
Preference number: 4 (lower is better)
Translates to: QEPGIQSKGGGSCKEPAVWPRKS*RRPAPT
Trigger: GGTCGGAGCCGGGCGCCTGCAGCTTTTTCGGGGCCA...AACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCGGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR GCA 90 bp CACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCACCAGGCCCTCTTCTGTaGGGTACTCACCCCGATCAC +
Preference number: 4 (lower is better)
Translates to: HPAVSSEGQRLAPDRWMPPGPLL*GTHPDH
Trigger: GTGATCGGGGTGAGTACCGCACAGAAGAGGGCCTGG...TGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCCGCCGGCGTGGGCGGTaGTCGGCACCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSRRRGR*SAPPGS
Trigger: ACTACCTGGTGGTGCCGAGCACCGCCCACGCCGGCG...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGTCACCCCCATCCAGGTaGTGGCTGCAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMSPPSR*WLQWQK
Trigger: CTTCTGCCACTGCAGCCAGCACCTGGATGGGGGTGA...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTGCCCTGAGCAGCAGGTaGGCCCATCCGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: DIADSLPGPLADAPPGLRALSSR*AHPEIL
Trigger: TAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGC...ACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGATGCTCCTCCGGGTCTaGGTCGGGCGTGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRMLLRV*VGRGSL
Trigger: CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGTCAGCACAGAACTCATaGGGCCTCATCCATTTCACG +
Preference number: 4 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGSAQNS*GLIHFT
Trigger: CGTGAAATGGATGAGGCCCCATGAGTTCTGTGCTGA...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGCTCCACGCAGCCCCATaGGTTCCGCAGCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKLHAAP*VPQPQQ
Trigger: CTGCTGCGGCTGCGGAACCCATGGGGCTGCGTGGAG...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGGAGTGTGTCCCAGCGTaGGCAGCTGTCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRECVPA*AAVAPG
Trigger: GCCTGGAGCGACAGCTGCCCACGCTGGGACACACTC...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGCATCGCGGCACTCGGTaGGGAGTGTGTCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPREHRGTR*GVCPSV
Trigger: CACGCTGGGACACACTCCCCACCGAGTGCCGCGATG...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGCACCCAGCGGCCTTaGAAGGTGTGGACGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EDIADSLPGPLADAPPGLRTQRP*KVWTCQ
Trigger: CTGGCACGTCCACACCTTCCAAGGCCGCTGGGTGCG...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACGCCGCCGGTTGCGCTaGATGAGGGACAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLRRRLR*MRDRRT
Trigger: GGTCCTTCTGTCCCTCATCCAGCGCAACCGGCGGCG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp ATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGGTCTGGGTCAGCTaGTTGTTCAGGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MLLRVCVGRGSLGTLQRWRVWVS*LFRWKP
Trigger: AGGCTTCCACCTGAACAACCAGCTGACCCAGACCCT...CCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp GAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGCGGCTGGTGAGGGTCTaGGTCAGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: EVVLLSNPALSSRCAHPERLVRV*VSWLFR
Trigger: CCTGAACAACCAGCTGACCCAGACCCTCACCAGCCG...CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGCGGCTGGTGAGGGTCTaGGTCAGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPERLVRV*VSWLFR
Trigger: CCTGAACAACCAGCTGACCCAGACCCTCACCAGCCG...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGGATCCTAGGAGAAGGTaGCCACCTCCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ILCPGPLLMLLRVCVGRGDPRRR*PPPSTV
Trigger: GACAGTGGATGGAGGTGGCCACCTTCTCCTAGGATC...CCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGGTACGCAGGCCAGAGTaGTCACCCGGCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARVRRPE*SPGREQ
Trigger: CTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTAC...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGTACGCAGGCCAGAGTaGTCACCCGGCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLVRRPE*SPGREQ
Trigger: CTGCTCACGGCCGGGTGACCACTCTGGCCTGCGTAC...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACCACGAGCTGGATGGTaGCCCTCCCACTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLPRAGW*PSHCWM
Trigger: CATCCAGCAGTGGGAGGGTCACCATCCAGCTCGTGG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATAGAAGACACGCAGAGTaGAGTCAGCCTCGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDRRHAE*SQPRRR
Trigger: CCGGCGACGAGGCTGACTTCACTCTGCGTGTCTTCT...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGAAGACACGCAGAGTaGAGTCAGCCTCGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: GPETSPRQVDARESGTHARRHAE*SQPRRR
Trigger: CCGGCGACGAGGCTGACTTCACTCTGCGTGTCTTCT...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGTGTGGGTCAGGCAGATaGCCCCCTCACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRCGSGR*PPHPHP
Trigger: TGGATGGGGGTGAGGGGGTCATCTGCCTGACCCACA...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKSATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGCGCCGGCGTGGGCGGTaGTCGGCACCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: AREGLSLFLFLSEEYAGQRRRGR*SAPPGS
Trigger: ACTACCTGGTGGTGCCGAGCACCGCCCACGCCGGCG...CTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGCATCCAGGTGCTGGCTaGAGTGGCAGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPEHPGAG*SGRRCR
Trigger: CCTGCATCTTCTGCCACTGCAGCCAGCACCTGGATG...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGCCCTGAGCAGCAGGTaGGCCCATCCGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: GQRLAPDRWMPERVAPMPALSSR*AHPEIL
Trigger: TAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGC...TGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp AGCAGGTGCGCCCATCCGGAGATCCTAGGAGAAGGTGGCCACCTCCATCCACTGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SRCAHPEILGEGGHLHPLLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CAGTGGATGGAGGTGGCCACCTTCTCCTAGGATCTCCGGATGGGCGCACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
CDS-3UTR GCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGCTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCACTTGCTCAGCAACCCTaGCCTGAGCAGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GQRLAPDRWMPERVAPMPLAQQP*PEQQVR
Trigger: GCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAG...TGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCCCCCAGACAGGTGGATaGCAGAGAGAGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: GPETSPRQVDARESGTHAPQTGG*QREWHP
Trigger: TGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGTGCACGGTGTCGAAATaGAGGAGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: IADSLPGPLADAPPGLRRCTVSK*RRKSRS
Trigger: GCTGCGGGACTTCCTCCTCCATTTCGACACCGTGCA...CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp TGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCAGCTCCTCTGGAATCTaGAACACGTGGAAGCCAACG +
Preference number: 4 (lower is better)
Translates to: CVGRGSLGTLQRWRWADGSSSGI*NTWKPT
Trigger: CGTTGGCTTCCACGTGTTCCAGATTCCAGAGGAGCT...GCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCCACCAGGTAGTGGCCTaGACGCAGGCAGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSHQVVA*TQAAAA
Trigger: CGCCGCTGCTGCCTGCGTCCAGGCCACTACCTGGTG...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGCGATCTCTCTGGGGGTaGAGGTATGGGCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRRSLWG*RYGPWQ
Trigger: CTGCCAGGGCCCATACCTCCACCCCCAGAGAGATCG...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGGTGCTGGCTGCAGTaGCAGAAGATGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPERCWLQ*QKMQVR
Trigger: CCTCACCTGCATCTTCTGCCACTGCAGCCAGCACCT...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGTCCATCCACTGTCTGTaGGTCAGGCAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMSIHCL*VRQMTP
Trigger: GGGGGTCATCTGCCTGACCCACAGACAGTGGATGGA...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATGGATGCCAGAGAGAGTaGCACCCATGCCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDGCQRE*HPCQAR
Trigger: CCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCC...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp AGCCGGGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTACCCCCACGAGCTGGATGGTaGCCCTCCCACTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SRGYRVREAAAARNQQLPPRAGW*PSHCWM
Trigger: CATCCAGCAGTGGGAGGGTCACCATCCAGCTCGTGG...GGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR TCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATCCTTGTGTGTGCCCGTaGTGGAATACGCGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDPCVCP*WNTRVP
Trigger: AGGGACACGCGTATTCCATCACGGGCACACACAAGG...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGACTGCAGGTCTGCGCTaGTCACGTCGTCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRTAGLR*SRRRSP
Trigger: TGGAGATCGACGACGTGATCAGCGCAGACCTGCAGT...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTATCTCCAGCCAGCTCCTaGAACAGCTGCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLSPASS*NSCSNP
Trigger: GGGGTTGGAGCAGCTGTTTCAGGAGCTGGCTGGAGA...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000601953.5
CDS-3UTR TCA 90 bp CACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGGAGCTGAGAGGCATTaGGTTCTTCCTCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPAVSSEGQRLAPDRWMPGAERH*VLPPLQ
Trigger: CTGGAGAGGAGGAAGAACTCAATGCCTCTCAGCTCC...TGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000601953.5
CDS-3UTR TCA 90 bp GGAAGCCTGCTGCATTCAGTGCCAGCCTCAGCTCGTAGGAGTTCATGGTTCCAGCCCGGTAGCGGCTGGTaGGGGTCTGGGTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSLLHSVPASARRSSWFQPGSGW*GSGSAG
Trigger: ACCAGCTGACCCAGACCCTCACCAGCCGCTACCGGG...CTGGAACCATGAACTCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594552.5
CDS-3UTR TCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTCCCGGCCGTGAGCAGTaGGGGCCAGAGACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCPGREQ*GPETSP
Trigger: GGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGG...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp AGCCATGCTGGAAATCCTGTCCAGGAGGGACCACCCGGCGCAGGAGCCGGGGATCGAATCCAGGCAGGCTaGCCGAATTGCCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: SHAGNPVQEGPPGAGAGDRIQAG*PNCLIA
Trigger: AGCTATGAGGCAATTCGGGCAGCCTGCCTGGATTCG...ATCCCCGGCTCCTGCGCCGGGTGGTCCCTCCTGGACAGGATTTCCAGCATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR GCA 90 bp ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGAGAGACTGCAGGTCTaGGCTGATCACGTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: IADSLPGPLADAPPGLRRERLQV*ADHVVD
Trigger: ATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTC...CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp GACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCCATGCCCGAAACACTaGAGCAGCTGCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: DIADSLPGPLADAPPGLRPCPKH*SSCSQV
Trigger: GACCTGTGAGCAGCTGCTGCAGTGTTTCGGGCATGG...ACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTATCACCCCCATCCAGGTaGTGGCTGCAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLSPPSR*WLQWQK
Trigger: CTTCTGCCACTGCAGCCAGCACCTGGATGGGGGTGA...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGCCCCAGACAGGTGGATaGCAGAGAGAGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRPQTGG*QREWHP
Trigger: TGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACCCCAGACAGGTGGATaGCAGAGAGAGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLPQTGG*QREWHP
Trigger: TGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMLARVI*SRRAVA
Trigger: AGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAG...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGCTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: IADSLPGPLADAPPGLRRLARVI*SRRAVA
Trigger: AGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAG...CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCATGCTCCTCCGGGTCTaGGTCGGGCGTGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSMLLRV*VGRGSL
Trigger: CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp CGGGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTACCCAGGGGGCGGGGCGAAGGTTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RGYRVREAAAARNQQLPRGRGEG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAACCTTCGCCCCGCCC...CCTGGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR CCA 90 bp GCGCAGGAGCCGGGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCATCCATTTCACGCCTTTaGCCTTCTCCGAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: AQEPGIQSKGGGSCKEPASISRL*PSPSPA
Trigger: GGCCGGACTCGGAGAAGGCCAAAGGCGTGAAATGGA...TGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCGGCTCCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR CCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGGGCCTTCTCCAGGAGTaGGGCCCAGAACTCATTCCG +
Preference number: 4 (lower is better)
Translates to: EDIADSLPGPLADAPPGLGLLQE*GPELIP
Trigger: CGGAATGAGTTCTGGGCCCCACTCCTGGAGAAGGCC...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAAAGCCTCATTCATGTaGCCGCCCCGCATCACCTCA +
Preference number: 4 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPEKASFM*PPRITS
Trigger: TGAGGTGATGCGGGGCGGCCACATGAATGAGGCTTT...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGCCACGAGGGACTCCTTaGCCAGGGCATGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: AREGLSLFLFLSEEYAGQPRGTP*PGHGAG
Trigger: CCCTGCGCCATGCCCTGGCCAAGGAGTCCCTCGTGG...CTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCCGCCGCCGGTTGCGCTaGATGAGGGACAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSRRRLR*MRDRRT
Trigger: GGTCCTTCTGTCCCTCATCCAGCGCAACCGGCGGCG...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCGCTCGTAGGAGTTCATaGTTCCAGAGGTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CVGRGSLGTLQRWRWADGARRSS*FQRCPH
Trigger: ATGAGGACACCTCTGGAACCATGAACTCCTACGAGC...GCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGGGTCTGGGTCAGCTaGTTGTTCAGGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPERVWVS*LFRWKP
Trigger: AGGCTTCCACCTGAACAACCAGCTGACCCAGACCCT...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCGGCTGGTGAGGGTCTaGGTCAGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARRLVRV*VSWLFR
Trigger: CCTGAACAACCAGCTGACCCAGACCCTCACCAGCCG...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGAGGTGCTGGCTGCAGTaGCAGAAGATGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRRCWLQ*QKMQVR
Trigger: CCTCACCTGCATCTTCTGCCACTGCAGCCAGCACCT...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGTCCATCCACTGTCTGTaGGTCAGGCAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRSIHCL*VRQMTP
Trigger: GGGGGTCATCTGCCTGACCCACAGACAGTGGATGGA...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGATCCTAGGAGAAGGTaGCCACCTCCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: HPAVSSEGQRLAPDRWMPDPRRR*PPPSTV
Trigger: GACAGTGGATGGAGGTGGCCACCTTCTCCTAGGATC...TGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGGGATGCCAGAGAGAGTaGCACCCATGCCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARGCQRE*HPCQAR
Trigger: CCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCC...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGGGATGCCAGAGAGAGTaGCACCCATGCCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EDIADSLPGPLADAPPGLGCQRE*HPCQAR
Trigger: CCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCC...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGGGCCTGGCTGCCTGGTaGTTGATGGTTTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRGLAAW*LMVLLP
Trigger: GGGGAGCAAAACCATCAACCACCAGGCAGCCAGGCC...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGATGGCCTGGCTGCCTaGTGGTTGATGGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: IADSLPGPLADAPPGLRRDGLAA*WLMVLL
Trigger: GAGCAAAACCATCAACCACCAGGCAGCCAGGCCATC...CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCTCGGGCGTGGGTCTCTaGGGACCCTCCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSSGVGL*GPSRGG
Trigger: TCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGA...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACGGTCTGCGTCGGGCGTaGGTCTCTGGGGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHGLRRA*VSGDPP
Trigger: TGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACC...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTGGCCCTTTAACCTCCTaGGTCACGGGGGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCGPLTS*VTGAGP
Trigger: AGGCCCCGCCCCCGTGACTCAGGAGGTTAAAGGGCC...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCGCCCACGCCGCCTGTaGAATCCACAAAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGRPRRL*NPQKPH
Trigger: ATGAGGCTTTTGTGGATTTCACAGGCGGCGTGGGCG...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGACTGCAGGTCTGCGCTaGTCACGTCGTCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARTAGLR*SRRRSP
Trigger: TGGAGATCGACGACGTGATCAGCGCAGACCTGCAGT...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGTCTCCAGCCAGCTCCTaGAACAGCTGCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKSPASS*NSCSNP
Trigger: GGGGTTGGAGCAGCTGTTTCAGGAGCTGGCTGGAGA...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000601953.5
CDS-3UTR TCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGGAGCTGAGAGGCATTaGGTTCTTCCTCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRGAERH*VLPPLQ
Trigger: CTGGAGAGGAGGAAGAACTCAATGCCTCTCAGCTCC...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000601953.5
CDS-3UTR TCA 90 bp GAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGAGTAAGGCCTGGAGCTaGGAGGCATTGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EVVLLSNPALSSRCAHPESKAWS*EALSSS
Trigger: GGAAGAACTCAATGCCTCTCAGCTCCAGGCCTTACT...CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000601953.5
CDS-3UTR TCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCCCCGGCCGTGAGCAGTaGGGGCCAGAGACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFPGREQ*GPETSP
Trigger: GGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGG...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HPAVSSEGQRLAPDRWMPVLVSE*GVRRPE
Trigger: CTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAAC...TGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCCCGGGCCCCTTGCTaGTGCTCCTCCGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYARAPC*CSSGSA
Trigger: CGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGC...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR GCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAAAGGGAGGCGGCAGCTaGAAGGAACCAGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLKGGGS*KEPAVT
Trigger: GGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTT...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTGCAGGAGCGCATGGCTaGGCGGGGAATCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCAGAHG*AGNPRG
Trigger: GCCTCTGGGATTCCCCGCGCAGCCATGCGCTCCTGC...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGCCATGCCCGAAACACTaGAGCAGCTGCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPREPCPKH*SSCSQV
Trigger: GACCTGTGAGCAGCTGCTGCAGTGTTTCGGGCATGG...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp ACAGGACACGAACCGCTCGAAGTCCACACGCAGACGGCTATCCCGGTAGCGGCTGCCTGCTGCATTCAGTaGCAGCCTCAGCTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: TGHEPLEVHTQTAIPVAAACCIQ*QPQLVG
Trigger: TCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGC...AGCCGCTACCGGGATAGCCGTCTGCGTGTGGACTTCGAGCGGTTCGTGTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
CDS-3UTR GCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCGCCTGCTGCATTCAGTaGCAGCCTCAGCTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGACCIQ*QPQLVG
Trigger: TCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGC...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCACATCCAGGTGCTGGCTaGAGTGGCAGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: GQRLAPDRWMPERVAPMPHPGAG*SGRRCR
Trigger: CCTGCATCTTCTGCCACTGCAGCCAGCACCTGGATG...TGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACCAAACTGCCAGAGCTaGAAGTGGAAGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLPNCQS*KWKTPA
Trigger: CGCAGGCGTCTTCCACTTCCAGCTCTGGCAGTTTGG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATAAAGCCTCATTCATGTaGCCGCCCCGCATCACCTCA +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDKASFM*PPRITS
Trigger: TGAGGTGATGCGGGGCGGCCACATGAATGAGGCTTT...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCCAGGGCAGAGCTAGCACTGCGCACCCAGCGGCCTTaGAAGGTGTGGACGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FSCVCPPPSRRARAELALRTQRP*KVWTCQ
Trigger: CTGGCACGTCCACACCTTCCAAGGCCGCTGGGTGCG...CAGTGCTAGCTCTGCCCTGGCTCTCCTAGAAGGTGGAGGACAGACACAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGAGGTGCTGGCTGCAGTaGCAGAAGATGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARRCWLQ*QKMQVR
Trigger: CCTCACCTGCATCTTCTGCCACTGCAGCCAGCACCT...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCTCCATCCACTGTCTGTaGGTCAGGCAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGSIHCL*VRQMTP
Trigger: GGGGGTCATCTGCCTGACCCACAGACAGTGGATGGA...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGATCCTAGGAGAAGGTaGCCACCTCCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRDPRRR*PPPSTV
Trigger: GACAGTGGATGGAGGTGGCCACCTTCTCCTAGGATC...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCCAGGGCAGAGCTAGCACTGGGGACCCTCCAGAGGTaGAGGTGGGCTGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: FSCVCPPPSRRARAELALGTLQR*RWADGL
Trigger: CAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCC...CAGTGCTAGCTCTGCCCTGGCTCTCCTAGAAGGTGGAGGACAGACACAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCAGCTGGTTGTTCAGGTaGAAGCCAGGCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGSWLFR*KPGSRA
Trigger: TGCCCTGGAGCCTGGCTTCCACCTGAACAACCAGCT...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595177.1
CDS-3UTR CCA 90 bp GGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGGTCTGGGTCAGCTaGTTGTTCAGGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GPETSPRQVDARESGTHARVWVS*LFRWKP
Trigger: TGGCTTCCACCTGAACAACCAGCTGACCCAGACCCT...GGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595177.1
CDS-3UTR TCA 90 bp CAGGCTCCCCTGACACACGTCTGTGCGGCTCATGTCTTCACAGATGAACTTCGGTTACCCAGGCTCCCCTaGCACACGTCTGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QAPLTHVCAAHVFTDELRLPRLP*HTSVRL
Trigger: GAGCCGCACAGACGTGTGTCAGGGGAGCCTGGGTAA...CCGAAGTTCATCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGGGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR TCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCCCCGGTAGCGGCTGGTaGGGGTCTGGGTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFPGSGW*GSGSAG
Trigger: ACCAGCTGACCCAGACCCTCACCAGCCGCTACCGGG...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQTGGCQREWHPCQARPRVLVSE*GVRRPE
Trigger: CTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAAC...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp CTGGAAGTGGAAGACGCCTGCGTAGCCATGCTGGAAATCCTGTCCAGGAGGGACGGGCGAAGGTTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LEVEDACVAMLEILSRRDGRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAACCTTCGCCC...GTCCCTCCTGGACAGGATTTCCAGCATGGCTACGCAGGCGTCTTCCACTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR GCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGGCCCCGAAAAAGCTaGAGGCGCCCGGCTCCGACC +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFWPRKS*RRPAPT
Trigger: GGTCGGAGCCGGGCGCCTGCAGCTTTTTCGGGGCCA...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGCGAATCCAGGCAGGCTaGCCGAATTGCCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPRERIQAG*PNCLIA
Trigger: AGCTATGAGGCAATTCGGGCAGCCTGCCTGGATTCG...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp GGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGAGAGACTGCAGGTCTaGGCTGATCACGTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: GQRLAPDRWMPERVAPMPERLQV*ADHVVD
Trigger: ATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTC...TGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGTGTAAGGCCAGGCTTTaGCCATGCCCGAAACACTGC +
Preference number: 4 (lower is better)
Translates to: EDIADSLPGPLADAPPGLCKARL*PCPKHC
Trigger: GCAGTGTTTCGGGCATGGGCAAAGCCTGGCCTTACA...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACGCCCTGAGCAGCAGGTaGGCCCATCCGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHALSSR*AHPEIL
Trigger: TAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGC...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGTGCACGGTGTCGAAATaGAGGAGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKCTVSK*RRKSRS
Trigger: GCTGCGGGACTTCCTCCTCCATTTCGACACCGTGCA...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGTTTCAGCATTAGGCTaGCTCCCGCCGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLVSALG*LPPELK
Trigger: CTTCAACTCCGGCGGGAGCCAGCCTAATGCTGAAAC...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGCCCAGCAGCTCCTCTaGAATCTGGAACACGTGGAA +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPREAQQLL*NLEHVE
Trigger: TTCCACGTGTTCCAGATTCCAGAGGAGCTGCTGGGC...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACTGGAGGTATGGGCCCTaGCAGGCTCCAGGGCAATGC +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHWRYGP*QAPGQC
Trigger: GCATTGCCCTGGAGCCTGCCAGGGCCCATACCTCCA...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACAGAGCTGCTGGAAGTaGTGTAAGGCCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLQSCWK*CKARLC
Trigger: GCAAAGCCTGGCCTTACACCACTTCCAGCAGCTCTG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAAGGGTCTGGGTCAGCTaGTTGTTCAGGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SPRQVDARESGTHARQGLRVWVS*LFRWKP
Trigger: AGGCTTCCACCTGAACAACCAGCTGACCCAGACCCT...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGGATCCTAGGAGAAGGTaGCCACCTCCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARDPRRR*PPPSTV
Trigger: GACAGTGGATGGAGGTGGCCACCTTCTCCTAGGATC...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCGATCCTAGGAGAAGGTaGCCACCTCCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGDPRRR*PPPSTV
Trigger: GACAGTGGATGGAGGTGGCCACCTTCTCCTAGGATC...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp CAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTACCCAGGCTCCCCTGTTCCAGGCCTCAGCATaGGGCCTCATCCATTTCACG +
Preference number: 4 (lower is better)
Translates to: QSKGGGSCKEPAVTQAPLFQASA*GLIHFT
Trigger: CGTGAAATGGATGAGGCCCCATGCTGAGGCCTGGAA...CAGGGGAGCCTGGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR CCA 90 bp GGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTACCCAGGCTCAGAACTCCTGTGGGTaGTGGGGGATTCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GIQSKGGGSCKEPAVTQAQNSCG*WGIPGL
Trigger: GAGGCCTGGAATCCCCCACCACCCACAGGAGTTCTG...AGCCTGGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR TCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCGCCGGTTGCGCTGGATaGGGGACAGAAGGACCGTGC +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFAGCAG*GTEGPC
Trigger: GCACGGTCCTTCTGTCCCTCATCCAGCGCAACCGGC...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGAGTAAGGCCTGGAGCTaGGAGGCATTGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRSKAWS*EALSSS
Trigger: GGAAGAACTCAATGCCTCTCAGCTCCAGGCCTTACT...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000595177.1
ENST00000601953.5
CDS-3UTR TCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTGTGGGTCAGGCAGATaGCCCCCTCACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCCGSGR*PPHPHP
Trigger: TGGATGGGGGTGAGGGGGTCATCTGCCTGACCCACA...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGTGGTCACCCGGCCGTaGGCAGTGAGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYVVTRP*AVRARD
Trigger: GTCTCTGGCCCTCACTGCTCACGGCCGGGTGACCAC...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GAAATCCTGTCCAGGAGGGACCACCCGGCGCAGGAGCCGGGGATACAGAGTAAGCCTGACACACGTCTGTaGGGCTCATGTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: EILSRRDHPAQEPGIQSKPDTRL*GSCLHR
Trigger: TCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGG...CTTACTCTGTATCCCCGGCTCCTGCGCCGGGTGGTCCCTCCTGGACAGGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR GCA 90 bp GGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTACCCAGGCTAAGGGAGGCGGCAGCTaGAAGGAACCAGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: GIQSKGGGSCKEPAVTQAKGGGS*KEPAVT
Trigger: GGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTT...AGCCTGGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR GCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGGGACAGAAGGACCGTaGACTTGGGCGTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYGTEGP*TWACGP
Trigger: GGGGCCGCACGCCCAAGTGCACGGTCCTTCTGTCCC...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCCAGGTGGAAGCCTGCTaGATTCAGTGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSQVEAC*IQCQPQ
Trigger: CTGAGGCTGGCACTGAATGCAGCAGGCTTCCACCTG...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGCTAGCAACATATCTCTaGCGTCTCTCCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: IADSLPGPLADAPPGLRRLATYL*RLSCSH
Trigger: ATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAG...CCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR CCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACGGCCTTCTCCAGGAGTaGGGCCCAGAACTCATTCCG +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHGLLQE*GPELIP
Trigger: CGGAATGAGTTCTGGGCCCCACTCCTGGAGAAGGCC...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCGAGTGTGTCCCAGCGTaGGCAGCTGTCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRASTVLSCQRGLARVICECVPA*AAVAPG
Trigger: GCCTGGAGCGACAGCTGCCCACGCTGGGACACACTC...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCGGGACCCTCCAGAGGTaGAGGTGGGCTGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFGTLQR*RWADGL
Trigger: CAGGCCATCAGCCCACCTCCACCTCTGGAGGGTCCC...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTTCGGGCGTGGGTCTCTaGGGACCCTCCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SHNEDIADSLPGPLADAPSGVGL*GPSRGG
Trigger: TCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGA...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CCA 90 bp CTGGAAGTGGAAGACGCCTGCGTAGCCATGCTGGAAATCCTGTCCAGGAGGGACAGCACAGAACTCCTGTaGGTGGTGGGGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LEVEDACVAMLEILSRRDSTELL*VVGDSR
Trigger: CCTGGAATCCCCCACCACCCACAGGAGTTCTGTGCT...GTCCCTCCTGGACAGGATTTCCAGCATGGCTACGCAGGCGTCTTCCACTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR TCA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTTTACCCAGGCTCCCCTaGCACACGTCTGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SHNEDIADSLPGPLADAPLPRLP*HTSVRL
Trigger: GAGCCGCACAGACGTGTGTCAGGGGAGCCTGGGTAA...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp GGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGATAGCGTTAAACGGAACTaGGGATTGGTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GGLAQQPCPEQQVRPSGDSVKRN*GLVQKV
Trigger: AACCTTCTGGACCAATCCTCAGTTCCGTTTAACGCT...ATCTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTCCAGCCAGCTCCTaGAACAGCTGCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCSPASS*NSCSNP
Trigger: GGGGTTGGAGCAGCTGTTTCAGGAGCTGGCTGGAGA...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000601953.5
CDS-3UTR TCA 90 bp ACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTTCAGCAACCCTGCCCTaGGCAGCAGGTGCGCCCATC +
Preference number: 4 (lower is better)
Translates to: TVLSCQRGLARVICSRRASATLP*AAGAPI
Trigger: GATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGA...AGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp ACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCTGGCCCGGGCCCCTTGCTaGTGCTCCTCCGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: TYLCRLSCSHNEDIADSLARAPC*CSSGSA
Trigger: CGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGC...CAGAGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR GCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCAGGTGGAAGCCTGCTaGATTCAGTGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHQVEAC*IQCQPQ
Trigger: CTGAGGCTGGCACTGAATGCAGCAGGCTTCCACCTG...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCCAGGGCAGAGCTAGCACTGGGGCCTCTCTTCCATTaGAGCCCCAGTGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FSCVCPPPSRRARAELALGPLFH*SPSGVF
Trigger: AAAGACCCCACTGGGGCTCCAATGGAAGAGAGGCCC...CAGTGCTAGCTCTGCCCTGGCTCTCCTAGAAGGTGGAGGACAGACACAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGATCACTCAGGGCAGTaGCGCCCACGAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVDHSGQ*RPRGTP
Trigger: AGGAGTCCCTCGTGGGCGCCACTGCCCTGAGTGATC...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTATCTCCACGGCCGTGTaGCGGCGCTCGGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: SHNEDIADSLPGPLADAPISTAV*RRSEKT
Trigger: TGTCTTCTCCGAGCGCCGCCACACGGCCGTGGAGAT...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCATCTCCACGGCCGTGTaGCGGCGCTCGGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: GRASTVLSCQRGLARVICISTAV*RRSEKT
Trigger: TGTCTTCTCCGAGCGCCGCCACACGGCCGTGGAGAT...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp CCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGGCTCGTAGGAGTTCATaGTTCCAGAGGTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PETSPRQVDARESGTHARARRSS*FQRCPH
Trigger: ATGAGGACACCTCTGGAACCATGAACTCCTACGAGC...CCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp GCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGTCCATCCACTGTCTGTaGGTCAGGCAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: AREGLSLFLFLSEEYAGQSIHCL*VRQMTP
Trigger: GGGGGTCATCTGCCTGACCCACAGACAGTGGATGGA...CTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp AGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGGTCATGTCTTCACAGATaGACTTCGGCTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RQVDARESGTHARQGLGRSCLHR*TSAQHR
Trigger: TCTGTGCTGAGCCGAAGTTCATCTGTGAAGACATGA...CCTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCAGCCGCACCTTGGTaGAGCCCAGGAACACCTTGT +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVAAAPW*SPGTPC
Trigger: ACAAGGTGTTCCTGGGCTTCACCAAGGTGCGGCTGC...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCTCTCCAGCCAGCTCCTaGAACAGCTGCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVSPASS*NSCSNP
Trigger: GGGGTTGGAGCAGCTGTTTCAGGAGCTGGCTGGAGA...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000601953.5
CDS-3UTR TCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSVLVSE*GVRRPE
Trigger: CTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAAC...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCCCTCCCACTGCTGGATaGCATCTGGACACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFPPTAG*HLDTGL
Trigger: GAGGCCAGTGTCCAGATGGCATCCAGCAGTGGGAGG...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTCAGGTGGAAGCCTGCTaGATTCAGTGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCQVEAC*IQCQPQ
Trigger: CTGAGGCTGGCACTGAATGCAGCAGGCTTCCACCTG...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTCACCCCCATCCAGGTaGTGGCTGCAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFSPPSR*WLQWQK
Trigger: CTTCTGCCACTGCAGCCAGCACCTGGATGGGGGTGA...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCTCACCCCCATCCAGGTaGTGGCTGCAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVSPPSR*WLQWQK
Trigger: CTTCTGCCACTGCAGCCAGCACCTGGATGGGGGTGA...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCCCTGAGCAGCAGGTaGGCCCATCCGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYALSSR*AHPEIL
Trigger: TAGGATCTCCGGATGGGCGCACCTGCTGCTCAGGGC...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCCCCCAGACAGGTGGATaGCAGAGAGAGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: GRASTVLSCQRGLARVICPQTGG*QREWHP
Trigger: TGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCCCCCAGACAGGTGGATaGCAGAGAGAGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVPQTGG*QREWHP
Trigger: TGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHLARVI*SRRAVA
Trigger: AGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAG...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGCAACATATCTCTaGCGTCTCTCCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: TSPRQVDARESGTHARQGLATYL*RLSCSH
Trigger: ATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAG...GCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR CCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTCCAAACTGCCAGAGCTaGAAGTGGAAGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCPNCQS*KWKTPA
Trigger: CGCAGGCGTCTTCCACTTCCAGCTCTGGCAGTTTGG...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTAGGAGCCGTGGAGCTTaGCGTAGGCCTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SHNEDIADSLPGPLADAPRSRGA*RRPSPG
Trigger: TCCTGGAGAAGGCCTACGCCAAGCTCCACGGCTCCT...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCAGGAGCCGTGGAGCTTaGCGTAGGCCTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVRSRGA*RRPSPG
Trigger: TCCTGGAGAAGGCCTACGCCAAGCTCCACGGCTCCT...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCCGGCCGTGAGCAGCTCCTCTGGAATCTaGAACACGTGGAAGCCAACG +
Preference number: 4 (lower is better)
Translates to: FLFLSEEYAGQSGHPAVSSSSGI*NTWKPT
Trigger: CGTTGGCTTCCACGTGTTCCAGATTCCAGAGGAGCT...GCTCACGGCCGGGTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCCAGGGCAGAGCTAGCACTGCAGAGCTGCTGGAAGTaGTGTAAGGCCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FSCVCPPPSRRARAELALQSCWK*CKARLC
Trigger: GCAAAGCCTGGCCTTACACCACTTCCAGCAGCTCTG...CAGTGCTAGCTCTGCCCTGGCTCTCCTAGAAGGTGGAGGACAGACACAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGCTTAAGCTGTCAACGTaGACTAGCTCGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: QTGGCQREWHPCQARPRELKLST*TSSCHL
Trigger: CAGATGACACGAGCTAGTCCACGTTGACAGCTTAAG...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCCCTTGTGTGTGCCCGTaGTGGAATACGCGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFPCVCP*WNTRVP
Trigger: AGGGACACGCGTATTCCATCACGGGCACACACAAGG...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTGCAGCCGCACCTTGGTaGAGCCCAGGAACACCTTGT +
Preference number: 4 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCAAAPW*SPGTPC
Trigger: ACAAGGTGTTCCTGGGCTTCACCAAGGTGCGGCTGC...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp ACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTCCAGGCCCTCTTCTGTaGGGTACTCACCCCGATCAC +
Preference number: 4 (lower is better)
Translates to: TVLSCQRGLARVICSRRAPGPLL*GTHPDH
Trigger: GTGATCGGGGTGAGTACCGCACAGAAGAGGGCCTGG...AGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCCAGGTGGAAGCCTGCTaGATTCAGTGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRASTVLSCQRGLARVICQVEAC*IQCQPQ
Trigger: CTGAGGCTGGCACTGAATGCAGCAGGCTTCCACCTG...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCCATCCAGGTGCTGGCTaGAGTGGCAGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFHPGAG*SGRRCR
Trigger: CCTGCATCTTCTGCCACTGCAGCCAGCACCTGGATG...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTGTTTCAGCATTAGGCTaGCTCCCGCCGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCVSALG*LPPELK
Trigger: CTTCAACTCCGGCGGGAGCCAGCCTAATGCTGAAAC...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTCCATCCACTGTCTGTaGGTCAGGCAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFSIHCL*VRQMTP
Trigger: GGGGGTCATCTGCCTGACCCACAGACAGTGGATGGA...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
3UTR CAA 72 bp CTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTaGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVSSAREGLSLF*FLSEEYAGQSG
Trigger: ACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCCCACGCCGCCTGTaGAATCCACAAAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCRPRRL*NPQKPH
Trigger: ATGAGGCTTTTGTGGATTTCACAGGCGGCGTGGGCG...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR TCA 90 bp TGCCAGCCTCAGCTCGTAGGAGTTCATGGTTCCAGAGGTGTCCTCATCGAACTTGGAGCTGAGAGGCATTaGGTTCTTCCTCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CQPQLVGVHGSRGVLIELGAERH*VLPPLQ
Trigger: CTGGAGAGGAGGAAGAACTCAATGCCTCTCAGCTCC...AAGTTCGATGAGGACACCTCTGGAACCATGAACTCCTACGAGCTGAGGCTGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
CDS-3UTR GCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCCTCAGCGAGCAGATCTaGACGGTGTCGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVLSEQI*TVSKWR
Trigger: CCTCCATTTCGACACCGTGCAGATCTGCTCGCTGAG...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTGCCTGCTGCATTCAGTaGCAGCCTCAGCTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCACCIQ*QPQLVG
Trigger: TCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGC...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCATCCAGGTGCTGGCTaGAGTGGCAGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCHPGAG*SGRRCR
Trigger: CCTGCATCTTCTGCCACTGCAGCCAGCACCTGGATG...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR GCA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGCTCTGCCGTCTCTCCTaGTCTCATAATGAAGACATA +
Preference number: 4 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKLCRLS*SHNEDI
Trigger: TATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAG...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR CCA 90 bp GCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGGCTCGTAGGAGTTCATaGTTCCAGAGGTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AREGLSLFLFLSEEYAGQARRSS*FQRCPH
Trigger: ATGAGGACACCTCTGGAACCATGAACTCCTACGAGC...CTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTAGGTGCTGGCTGCAGTaGCAGAAGATGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TVLSCQRGLARVICSRRARCWLQ*QKMQVR
Trigger: CCTCACCTGCATCTTCTGCCACTGCAGCCAGCACCT...AGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp ATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGAAGGCGGGCAGAGCTaGGGGAGGACCGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IYIHLATYLCRLSCSHNEEGGQS*GRTGCR
Trigger: GCGGCAGCCGGTCCTCCCTCAGCTCTGCCCGCCTTC...TTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTGGAGCTGAGAGGCATTaGGTTCTTCCTCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCGAERH*VLPPLQ
Trigger: CTGGAGAGGAGGAAGAACTCAATGCCTCTCAGCTCC...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000601953.5
CDS-3UTR GCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACTGTAAGGCCAGGCTTTaGCCATGCCCGAAACACTGC +
Preference number: 4 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYCKARL*PCPKHC
Trigger: GCAGTGTTTCGGGCATGGGCAAAGCCTGGCCTTACA...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCCCAGCAGCTCCTCTaGAATCTGGAACACGTGGAA +
Preference number: 4 (lower is better)
Translates to: VSSAREGLSLFLFLSEEYAQQLL*NLEHVE
Trigger: TTCCACGTGTTCCAGATTCCAGAGGAGCTGCTGGGC...GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CCA 90 bp GCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTTGGAGGTATGGGCCCTaGCAGGCTCCAGGGCAATGC +
Preference number: 4 (lower is better)
Translates to: ATYLCRLSCSHNEDIADSWRYGP*QAPGQC
Trigger: GCATTGCCCTGGAGCCTGCCAGGGCCCATACCTCCA...AGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp TTCTCCTGTGTCTGTCCTCCACCTTCTAGGAGAGCCAGGGCAGAGCTAGCACTGCTTAAGCTGTCAACGTaGACTAGCTCGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: FSCVCPPPSRRARAELALLKLST*TSSCHL
Trigger: CAGATGACACGAGCTAGTCCACGTTGACAGCTTAAG...CAGTGCTAGCTCTGCCCTGGCTCTCCTAGAAGGTGGAGGACAGACACAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACCTTAAGCTGTCAACGTaGACTAGCTCGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHLKLST*TSSCHL
Trigger: CAGATGACACGAGCTAGTCCACGTTGACAGCTTAAG...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp ACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGATGGCCTGGCTGCCTaGTGGTTGATGGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TVLSCQRGLARVICSRRADGLAA*WLMVLL
Trigger: GAGCAAAACCATCAACCACCAGGCAGCCAGGCCATC...AGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR TCA 90 bp ACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTAGTAAGGCCTGGAGCTaGGAGGCATTGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TVLSCQRGLARVICSRRASKAWS*EALSSS
Trigger: GGAAGAACTCAATGCCTCTCAGCTCCAGGCCTTACT...AGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000601953.5
CDS-3UTR CCA 90 bp GGGCTGTCGCTGTTCTTGTTTCTGAGTGAGGAGTACGCAGGCCAGAGTGGTCACAACGGAACTGAGGATTaGTCCAGAAGGTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLSLFLFLSEEYAGQSGHNGTED*SRRFQH
Trigger: ATGCTGAAACCTTCTGGACCAATCCTCAGTTCCGTT...GTGACCACTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp CTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATAAGGGAGGCGGCAGCTaGAAGGAACCAGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: LATYLCRLSCSHNEDIADKGGGS*KEPAVT
Trigger: GGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTT...ATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp GCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTTTTCTTCCCAGGGCGTaGGGCCTTCAGTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATYLCRLSCSHNEDIADSFLPRA*GLQLWP
Trigger: TGGCCACAACTGAAGGCCCCACGCCCTGGGAAGAAA...AGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp ACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCTGCTGCTGGATGCCATCTaGACACTGGCCTCACAAGCC +
Preference number: 4 (lower is better)
Translates to: TYLCRLSCSHNEDIADSLLLDAI*TLASQA
Trigger: GGCTTGTGAGGCCAGTGTCCAGATGGCATCCAGCAG...CAGAGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp GTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCCAGAGAACAGCCCCATaGTGTTTTGTCTCAGATAGA +
Preference number: 4 (lower is better)
Translates to: VLSCQRGLARVICSRRAVQRTAP*CFVSDR
Trigger: TCTATCTGAGACAAAACAGCATGGGGCTGTTCTCTG...GACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCCAGAGAACAGCCCCATaGTGTTTTGTCTCAGATAGA +
Preference number: 4 (lower is better)
Translates to: GRASTVLSCQRGLARVICQRTAP*CFVSDR
Trigger: TCTATCTGAGACAAAACAGCATGGGGCTGTTCTCTG...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp ACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCTGCTAGCTCGTGTCATCTaGTCGAGAAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TYLCRLSCSHNEDIADSLLARVI*SRRAVA
Trigger: AGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAG...CAGAGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR CCA 90 bp TGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCTTAAGCTGTCAACGTaGACTAGCTCGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: CLKLSTWTSSCHLLEKGCLKLST*TSSCHL
Trigger: CAGATGACACGAGCTAGTCCACGTTGACAGCTTAAG...ACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR TCA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTGCTGCTCACAGGTCCTaGGCCCGATCTCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFAAHRS*ARSLWG
Trigger: CCCCCAGAGAGATCGGGCTCAGGACCTGTGAGCAGC...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR GCA 90 bp GCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCCTGACACACGTCTGTaGGGCTCATGTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: ATYLCRLSCSHNEDIADSPDTRL*GSCLHR
Trigger: TCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGG...AGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp TATATAAATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCACGGCTGGTGAGGGTCTaGGTCAGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YINIYSPSNISLPSLLLSRLVRV*VSWLFR
Trigger: CCTGAACAACCAGCTGACCCAGACCCTCACCAGCCG...TGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATATTTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR GCA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTCATCCAGGTGCTGGCTaGAGTGGCAGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFHPGAG*SGRRCR
Trigger: CCTGCATCTTCTGCCACTGCAGCCAGCACCTGGATG...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CCA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTATGCCATCTGGACACTaGCCTCACAAGCCGGCACCA +
Preference number: 4 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFMPSGH*PHKPAP
Trigger: TGGTGCCGGCTTGTGAGGCCAGTGTCCAGATGGCAT...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CCA 90 bp CTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATAACGGAACTGAGGATTaGTCCAGAAGGTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LATYLCRLSCSHNEDIADNGTED*SRRFQH
Trigger: ATGCTGAAACCTTCTGGACCAATCCTCAGTTCCGTT...ATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR TCA 90 bp ATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGTTCTTGTTTCTGAGTaGGGAGTACGCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: IYIHLATYLCRLSCSHNEVLVSE*GVRRPE
Trigger: CTCTGGCCTGCGTACTCCTCACTCAGAAACAAGAAC...TTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS-3UTR TCA 90 bp ATATATATTCACCTAGCAACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAAGCGTTAAACGGAACTaGGGATTGGTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: IYIHLATYLCRLSCSHNESVKRN*GLVQKV
Trigger: AACCTTCTGGACCAATCCTCAGTTCCGTTTAACGCT...TTCATTATGAGAGCAGGAGAGACGGCAGAGATATGTTGCTAGGTGAATATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR GCA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTCTCTGCCGTCTCTCCTaGTCTCATAATGAAGACATA +
Preference number: 4 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFLCRLS*SHNEDI
Trigger: TATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAG...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000594552.5
CDS CCA 90 bp CTCGTCGCCGGCGTGGGCGGTGCTCGGCACCACCAGGTAGTGGCCTaGACGCAGGCAGCAGCGGCGGGTCACGTCGCGGCGGGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: LVAGVGGARHHQVVA*TQAAAAGHVAAGAE
Trigger: CTCAGCGCCCGCCGCGACGTGACCCGCCGCTGCTGCCTGCGTCCAGGCCACTACCTGGTGGTGCCGAGCACCGCCCACGCCGGCGACGAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000597716.1
ENST00000601953.5
CDS-3UTR CAA 90 bp GCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGGCCCTCTGCCCGGGCCCCTaGCTGATGCTCCTCCGGGTC +
Preference number: 5 (lower is better)
Translates to: ASGVGLWGPSRGGGGLMALCPGP*LMLLRV
Trigger: GACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAG...GGCCATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CAA 90 bp ATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGCCCACGAGGGACTCCTaGGCCAGGGCATGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: MLLRVCVGRGSLGTLQRWPTRDS*ARAWRR
Trigger: CCTGCGCCATGCCCTGGCCAAGGAGTCCCTCGTGGG...CCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CAA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACGCACCCAGCGGCCTaGGAAGGTGTGGACGTGCCA +
Preference number: 5 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGTHPAA*EGVDVP
Trigger: TGGCACGTCCACACCTTCCAAGGCCGCTGGGTGCGT...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CAA 90 bp ATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGCTCTGCCCGGGCCCCTaGCTGATGCTCCTCCGGGTC +
Preference number: 5 (lower is better)
Translates to: MLLRVCVGRGSLGTLQRWLCPGP*LMLLRV
Trigger: GACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAG...CCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CAA 90 bp TCTGCGTCGGGCGTGGGTCTCTGGGGACCCTCCAGAGGTGGAGGTGGGCTGATGCTCTGCCCGGGCCCCTaGCTGATGCTCCTCCGGGTC +
Preference number: 5 (lower is better)
Translates to: SASGVGLWGPSRGGGGLMLCPGP*LMLLRV
Trigger: GACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAG...CATCAGCCCACCTCCACCTCTGGAGGGTCCCCAGAGACCCACGCCCGACGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS GCA 90 bp CCCTCCGGGCTGGGGCCCAGCACCTCCGGGCTCAGCGAGCAGATCTaGACGGTGTCGAAATGGAGGAGGAAGTCCCGCAGCTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: PSGLGPSTSGLSEQI*TVSKWRRKSRSSIQ
Trigger: CTGGATGGAGCTGCGGGACTTCCTCCTCCATTTCGACACCGTGCAGATCTGCTCGCTGAGCCCGGAGGTGCTGGGCCCCAGCCCGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS GCA 90 bp TGCCGCCCCTCCAGGAACAGTCCCCACCTGGAGAGACTGCAGGTCTaGGCTGATCACGTCGTCGATCTCCACGGCCGTGTGGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: CRPSRNSPHLERLQV*ADHVVDLHGRVAAL
Trigger: GAGCGCCGCCACACGGCCGTGGAGATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTCCAGGTGGGGACTGTTCCTGGAGGGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597716.1
CDS-3UTR CAA 90 bp CACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCACTCAGGCGCCGCCGGTaGCGCTGGATGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: HPAVSSEGQRLAPDRWMPLRRRR*RWMRDR
Trigger: TCTGTCCCTCATCCAGCGCAACCGGCGGCGCCTGAG...TGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CAA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGACGCACCCAGCGGCCTaGGAAGGTGTGGACGTGCCA +
Preference number: 5 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMTHPAA*EGVDVP
Trigger: TGGCACGTCCACACCTTCCAAGGCCGCTGGGTGCGT...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CAA 90 bp CAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGGAGTGGCTCCCGCCGGAGTaGAAGCCACGCACCCAGCGG +
Preference number: 5 (lower is better)
Translates to: QTGGCQREWHPCQARPREWLPPE*KPRTQR
Trigger: CCGCTGGGTGCGTGGCTTCAACTCCGGCGGGAGCCA...CTCCCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS GCA 90 bp CAGTCTGTGCTCAAGGCAGCCTTGCCTTTCAGCGGAAGGGGAGCTTaGGAGCAGCCGTGGCCCAGGTCACGGGGCCCACACAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: QSVLKAALPFSGRGA*EQPWPRSRGPHKIP
Trigger: GGGGATCTTGTGTGGGCCCCGTGACCTGGGCCACGGCTGCTCGCAAGCTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAGCACAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594497.1
ENST00000597716.1
ENST00000601685.1
CDS-3UTR CAA 90 bp GCGCAGGAGCCGGGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGGCAGGCTGCCCGAATaGCCTCATAGCTCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: AQEPGIQSKGGGSCKEPAGRLPE*PHSSGP
Trigger: GGGGCCAGAGCTATGAGGCAATTCGGGCAGCCTGCC...TGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCGGCTCCTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS TCA 90 bp TATGGCCTGGGCAGGAAGGATGAGTCAGGGCTGCCCTCCATGCCCTaGAGAGGGCTGCCAATGGGGCCTCCCAGGCAAGACAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: YGLGRKDESGLPSMP*RGLPMGPPRQDSLV
Trigger: CACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCTTCCTGCCCAGGCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS GCA 90 bp GCAGGAAGGATGAGTCAGGGCTGCCCTCCATGCCCTGAAGAGGGCTaGCAATGGGGCCTCCCAGGCAAGACAGCCTGGTGCCCATCCCAA +
Preference number: 5 (lower is better)
Translates to: AGRMSQGCPPCPEEG*QWGLPGKTAWCPSQ
Trigger: TTGGGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCTTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 90 bp CCTGAGCCCAACTCCCAGCAGCGCGGTGGGTTCATAGACATAGGGTaGCACCGGCTCTGGTTGCAGGACCCCTGGCTAAGACCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PEPNSQQRGGFIDIG*HRLWLQDPWLRPLL
Trigger: GAGGAGGGGTCTTAGCCAGGGGTCCTGCAACCAGAGCCGGTGCCACCCTATGTCTATGAACCCACCGCGCTGCTGGGAGTTGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594497.1
ENST00000597716.1
ENST00000601685.1
CDS CCA 90 bp AGGATGAGTCAGGGCTGCCCTCCATGCCCTGAAGAGGGCTGCCAATaGGGCCTCCCAGGCAAGACAGCCTGGTGCCCATCCCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: RMSQGCPPCPEEGCQ*GLPGKTAWCPSQLP
Trigger: AGGGAGTTGGGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 90 bp CAGGGTCACCCAACCCCTGCCAGGGACTGGCAACAAGCTAAGGTGTaGGCCTGTGGATGGCCACAGTGCAGACGGCCACAGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QGHPTPARDWQQAKV*ACGWPQCRRPQLSR
Trigger: CCTGCTCAGCTGTGGCCGTCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCTGGCAGGGGTTGGGTGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS-3UTR CAA 90 bp TGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGCTGTCGCTGTTCTaGTTTCTGAGTGAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: CPGPLLMLLRVCVGRGSLGLSLF*FLSEEY
Trigger: GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC...CAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS GCA 90 bp TTCAAATCCAGGCAGGGGGTGCCCAGTCTGTGCTCAAGGCAGCCTTaGCTTTCAGCGGAAGGGGAGCTTGCGAGCAGCCGTGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: FKSRQGVPSLCSRQP*LSAEGELASSRGPG
Trigger: ACCTGGGCCACGGCTGCTCGCAAGCTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAGCACAGACTGGGCACCCCCTGCCTGGATTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS GCA 90 bp CCTGAAGAGGGCTGCCAATGGGGCCTCCCAGGCAAGACAGCCTGGTaGCCATCCCAACTCCCTTTCTTCTGGTGTGGACCCCCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: PEEGCQWGLPGKTAW*PSQLPFFWCGPPAS
Trigger: GCTTGCTGGGGGTCCACACCAGAAGAAAGGGAGTTGGGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 90 bp CCCAGCACCTCCGGGCTCAGCGAGCAGATCTGCACGGTGTCGAAATaGAGGAGGAAGTCCCGCAGCTCCATCCAGAACTCGCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: PSTSGLSEQICTVSK*RRKSRSSIQNSPSS
Trigger: GGAGGATGGCGAGTTCTGGATGGAGCTGCGGGACTTCCTCCTCCATTTCGACACCGTGCAGATCTGCTCGCTGAGCCCGGAGGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CCA 90 bp TGCCCTGAAGAGGGCTGCCAATGGGGCCTCCCAGGCAAGACAGCCTaGTGCCCATCCCAACTCCCTTTCTTCTGGTGTGGACCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: CPEEGCQWGLPGKTA*CPSQLPFFWCGPPA
Trigger: TGCTGGGGGTCCACACCAGAAGAAAGGGAGTTGGGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 90 bp ACCCCTGCCAGGGACTGGCAACAAGCTAAGGTGTGGGCCTGTGGATaGCCACAGTGCAGACGGCCACAGCTGAGCAGGGGGACTTGGAGA +
Preference number: 5 (lower is better)
Translates to: TPARDWQQAKVWACG*PQCRRPQLSRGTWR
Trigger: TCTCCAAGTCCCCCTGCTCAGCTGTGGCCGTCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCTGGCAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS-3UTR CAA 90 bp GAGGTGGTCTTGCTCAGCAACCCTGCCCTGAGCAGCAGGTGCGCCCATCCGGAGGTCTGGGTCAGCTGGTaGTTCAGGTGGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: EVVLLSNPALSSRCAHPEVWVSW*FRWKPA
Trigger: AGCAGGCTTCCACCTGAACAACCAGCTGACCCAGAC...CTCCGGATGGGCGCACCTGCTGCTCAGGGCAGGGTTGCTGAGCAAGACCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CAA 90 bp CCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGCCAGAGCTGGCTGCCTGGTGGTaGATGGTTTTGCTCCCCCTA +
Preference number: 5 (lower is better)
Translates to: PAVSSEGQRLAPDRWMPELAAWW*MVLLPL
Trigger: TAGGGGGAGCAAAACCATCAACCACCAGGCAGCCAG...CTCTGGCATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CAA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGAAGCCCAGGAACACCTaGTGTGTGCCCGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMKPRNT*CVPVME
Trigger: TTCCATCACGGGCACACACAAGGTGTTCCTGGGCTT...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CAA 90 bp CCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTAGGCTGGCTGCCTGGTGGTaGATGGTTTTGCTCCCCCTA +
Preference number: 5 (lower is better)
Translates to: PQTGGCQREWHPCQARPRLAAWW*MVLLPL
Trigger: TAGGGGGAGCAAAACCATCAACCACCAGGCAGCCAG...CCTAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS-3UTR CAA 90 bp CCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGCGTCGGGCGTGGGTCTCTGGGGGTGTCCTCATCGAACTaGTTAAATATGGCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PGPLLMLLRVCVGRGSLGVSSSN*LNMASP
Trigger: TGGAGAGGCCATATTTAACAAGTTCGATGAGGACAC...CCCCAGAGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGGGGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597987.5
CDS GCA 90 bp TTAAATATGGCCTGGGCAGGAAGGATGAGTCAGGGCTGCCCTCCATaGCCTGAAGAGGGCTGCCAATGGGGCCTCCCAGGCAAGACAGCC +
Preference number: 5 (lower is better)
Translates to: LNMAWAGRMSQGCPP*PEEGCQWGLPGKTA
Trigger: GGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCTTCCTGCCCAGGCCATATTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS GCA 90 bp TCCCCACGACCACCCCAGGACCCTGTCCACACCTGCTGCATTCAGTaGCAGCCTCAGCTCGTAGGAGTTCATGGTTCCAGAGGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SPRPPQDPVHTCCIQ*QPQLVGVHGSRGVL
Trigger: GAGGACACCTCTGGAACCATGAACTCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGTGTGGACAGGGTCCTGGGGTGGTCGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 90 bp CAGGTCCTGTCCCCACGACCACCCCAGGACCCTGTCCACACCTGCTaGATTCAGTGCCAGCCTCAGCTCGTAGGAGTTCATGGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: QVLSPRPPQDPVHTC*IQCQPQLVGVHGSR
Trigger: TCTGGAACCATGAACTCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGTGTGGACAGGGTCCTGGGGTGGTCGTGGGGACAGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 90 bp GAACAGGTCCTGTCCCCACGACCACCCCAGGACCCTGTCCACACCTaGTGCATTCAGTGCCAGCCTCAGCTCGTAGGAGTTCATGGTTCC +
Preference number: 5 (lower is better)
Translates to: EQVLSPRPPQDPVHT*CIQCQPQLVGVHGS
Trigger: GGAACCATGAACTCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGTGTGGACAGGGTCCTGGGGTGGTCGTGGGGACAGGACCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS-3UTR CAA 90 bp GGCAGAGCTAGCACTGTCTTAAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTGGCTCCCGCCGGAGTaGAAGCCACGCACCCAGCGG +
Preference number: 5 (lower is better)
Translates to: GRASTVLSCQRGLARVICWLPPE*KPRTQR
Trigger: CCGCTGGGTGCGTGGCTTCAACTCCGGCGGGAGCCA...GCAGATGACACGAGCTAGTCCACGTTGACAGCTTAAGACAGTGCTAGCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CAA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTCTCAGGCGCCGCCGGTaGCGCTGGATGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCLRRRR*RWMRDR
Trigger: TCTGTCCCTCATCCAGCGCAACCGGCGGCGCCTGAG...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS-3UTR CAA 90 bp AGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGCCTACTGGCTGCCTGGTGGTaGATGGTTTTGCTCCCCCTA +
Preference number: 5 (lower is better)
Translates to: SPRQVDARESGTHARQGLLAAWW*MVLLPL
Trigger: TAGGGGGAGCAAAACCATCAACCACCAGGCAGCCAG...TAGGCCTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
CDS GCA 90 bp TCGAACTTGTTAAATATGGCCTGGGCAGGAAGGATGAGTCAGGGCTaGCCTCCATGCCCTGAAGAGGGCTGCCAATGGGGCCTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SNLLNMAWAGRMSQG*PPCPEEGCQWGLPG
Trigger: GCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCTTCCTGCCCAGGCCATATTTAACAAGTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS GCA 90 bp CCTAGTCCAGGAAAGAGGGCTTGTGAGGCCATTTACTCATCCAGCTaGTCTGGGCCAAGCCCTGTGCTAGGGACACGGCAGGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: PSPGKRACEAIYSSS*SGPSPVLGTRQGLT
Trigger: TGTCAGCCCCTGCCGTGTCCCTAGCACAGGGCTTGGCCCAGAGCAGCTGGATGAGTAAATGGCCTCACAAGCCCTCTTTCCTGGACTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 90 bp AGGGACTGGCAACAAGCTAAGGTGTGGGCCTGTGGATGGCCACAGTaGAGACGGCCACAGCTGAGCAGGGGGACTTGGAGACAATGGGAT +
Preference number: 5 (lower is better)
Translates to: RDWQQAKVWACGWPQ*RRPQLSRGTWRQWD
Trigger: ATCCCATTGTCTCCAAGTCCCCCTGCTCAGCTGTGGCCGTCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CCA 90 bp CTCCCAGGCAAGACAGCCTGGTGCCCATCCCAACTCCCTTTCTTCTaGTGTGGACCCCCAGCAAGCAGCCTAGCCACTTGGGACTTCTGT +
Preference number: 5 (lower is better)
Translates to: LPGKTAWCPSQLPFF*CGPPASSLATWDFC
Trigger: ACAGAAGTCCCAAGTGGCTAGGCTGCTTGCTGGGGGTCCACACCAGAAGAAAGGGAGTTGGGATGGGCACCAGGCTGTCTTGCCTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS-3UTR CAA 90 bp CGGGGATACAGAGTAAGGGAGGCGGCAGCTGCAAGGAACCAGCAGTTACCCAGGATCCATTTCACGCCTTaGGCCTTCTCCGAGTCCGGC +
Preference number: 5 (lower is better)
Translates to: RGYRVREAAAARNQQLPRIHFTP*AFSESG
Trigger: GCCGGACTCGGAGAAGGCCAAAGGCGTGAAATGGAT...CCTGGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS TCA 90 bp CCCCTCCAGGAACAGTCCCCACCTGGAGAGACTGCAGGTCTGCGCTaGTCACGTCGTCGATCTCCCTGCAAATTACAGATGGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: PLQEQSPPGETAGLR*SRRRSPCKLQMGSG
Trigger: CCCACTTCCCATCTGTAATTTGCAGGGAGATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTCCAGGTGGGGACTGTTCCTGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593700.5
ENST00000597354.1
ENST00000601685.1
CDS TCA 90 bp CCAGGCTCCCCTGACACACGTCTGTGCGGCTCATGTCTTCACAGATaGACTTCGGCTCAGCACAGAACTCCTGTGGGTGGTGGGGGATTC +
Preference number: 5 (lower is better)
Translates to: PGSPDTRLCGSCLHR*TSAQHRTPVGGGGF
Trigger: GAATCCCCCACCACCCACAGGAGTTCTGTGCTGAGCCGAAGTTCATCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGGGGAGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS GCA 90 bp TGCCGCCCCTCCAGGAACAGTCCCCACCTGGAGAGACTGCAGGTCTaGGCTGATCACGTCGTCGATCTCCCTGCAAATTACAGATGGGAA +
Preference number: 5 (lower is better)
Translates to: CRPSRNSPHLERLQV*ADHVVDLPANYRWE
Trigger: TTCCCATCTGTAATTTGCAGGGAGATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTCCAGGTGGGGACTGTTCCTGGAGGGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593700.5
ENST00000597354.1
ENST00000601685.1
CDS-3UTR CAA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCGGCAGGCTGCCCGAATaGCCTCATAGCTCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFGRLPE*PHSSGP
Trigger: GGGGCCAGAGCTATGAGGCAATTCGGGCAGCCTGCC...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CAA 90 bp GGTCACCCGGCCGTGAGCAGTGAGGGCCAGAGACTAGCCCCAGACAGGTGGATGGTGTCCTCATCGAACTaGTTAAATATGGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GHPAVSSEGQRLAPDRWMVSSSN*LNMACH
Trigger: GTGGCAGGCCATATTTAACAAGTTCGATGAGGACAC...CATCCACCTGTCTGGGGCTAGTCTCTGGCCCTCACTGCTCACGGCCGGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CCA 90 bp TCCTTATTTGGCCTCTTTCAGGGTCACCCAACCCCTGCCAGGGACTaGCAACAAGCTAAGGTGTGGGCCTGTGGATGGCCACAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SLFGLFQGHPTPARD*QQAKVWACGWPQCR
Trigger: TCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCTGGCAGGGGTTGGGTGACCCTGAAAGAGGCCAAATAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS-3UTR CAA 90 bp AGACTAGCCCCAGACAGGTGGATGCCAGAGAGAGTGGCACCCATGCCAGGCAAGGGGCTGTCGCTGTTCTaGTTTCTGAGTGAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: RLAPDRWMPERVAPMPGKGLSLF*FLSEEY
Trigger: GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC...CTTGCCTGGCATGGGTGCCACTCTCTCTGGCATCCACCTGTCTGGGGCTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS CCA 90 bp GCTCATGTCTTCACAGATGAACTTCGGCTCAGCACAGAACTCCTGTaGGTGGTGGGGGATTCCAGGCCTCAGCATGGGGCCTCATCCATT +
Preference number: 5 (lower is better)
Translates to: AHVFTDELRLSTELL*VVGDSRPQHGASSI
Trigger: AATGGATGAGGCCCCATGCTGAGGCCTGGAATCCCCCACCACCCACAGGAGTTCTGTGCTGAGCCGAAGTTCATCTGTGAAGACATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR CAA 90 bp GAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTCCGGGTCTGGTGTCCTCATCGAACTaGTTAAATATGGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: EDIADSLPGPLADAPPGLVSSSN*LNMACH
Trigger: GTGGCAGGCCATATTTAACAAGTTCGATGAGGACAC...CAGACCCGGAGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CAA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTGTCTGGGTCAGCTGGTaGTTCAGGTGGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCVWVSW*FRWKPA
Trigger: AGCAGGCTTCCACCTGAACAACCAGCTGACCCAGAC...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS TCA 90 bp CCAGGCTCCCCTGACACACGTCTGTGCGGCTCATGTCTTCACAGATaGACTTCGGCTCAGCACAGAACTCATGGGGCCTCATCCATTTCA +
Preference number: 5 (lower is better)
Translates to: PGSPDTRLCGSCLHR*TSAQHRTHGASSIS
Trigger: TGAAATGGATGAGGCCCCATGAGTTCTGTGCTGAGCCGAAGTTCATCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGGGGAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000598684.5
CDS CCA 90 bp ATGTCTTCACAGATGAACTTCGGCTCAGCACAGAACTCCTGTGGGTaGTGGGGGATTCCAGGCCTCAGCATGGGGCCTCATCCATTTCAC +
Preference number: 5 (lower is better)
Translates to: MSSQMNFGSAQNSCG*WGIPGLSMGPHPFH
Trigger: GTGAAATGGATGAGGCCCCATGCTGAGGCCTGGAATCCCCCACCACCCACAGGAGTTCTGTGCTGAGCCGAAGTTCATCTGTGAAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS-3UTR CAA 90 bp TCTCATAATGAAGACATAGCCGATTCTCTGCCCGGGCCCCTTGCTGATGCTCCTATCCATTTCACGCCTTaGGCCTTCTCCGAGTCCGGC +
Preference number: 5 (lower is better)
Translates to: SHNEDIADSLPGPLADAPIHFTP*AFSESG
Trigger: GCCGGACTCGGAGAAGGCCAAAGGCGTGAAATGGAT...AGGAGCATCAGCAAGGGGCCCGGGCAGAGAATCGGCTATGTCTTCATTATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS-3UTR CAA 90 bp ACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTTCTTGTTTCGTCTGGGTCAGCTGGTaGTTCAGGTGGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: TWTSSCHLLEKGCRCSCFVWVSW*FRWKPA
Trigger: AGCAGGCTTCCACCTGAACAACCAGCTGACCCAGAC...GAAACAAGAACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS TCA 90 bp GGCCACCACTTTAAGGGCTGGGTGGATGTGACTCCCTTAAGCAGGTaGTGTTGTCAGTCCCATATTATAGAAGCCGAGGCACAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: GHHFKGWVDVTPLSR*CCQSHIIEAEAQGA
Trigger: GGCTCCCTGTGCCTCGGCTTCTATAATATGGGACTGACAACATCACCTGCTTAAGGGAGTCACATCCACCCAGCCCTTAAAGTGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS-3UTR CAA 90 bp AAGCTGTCAACGTGGACTAGCTCGTGTCATCTGCTCGAGAAGGGCTGTCGCTGTGGGCTGTCGCTGTTCTaGTTTCTGAGTGAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: KLSTWTSSCHLLEKGCRCGLSLF*FLSEEY
Trigger: GTACTCCTCACTCAGAAACAAGAACAGCGACAGCCC...ACAGCGACAGCCCTTCTCGAGCAGATGACACGAGCTAGTCCACGTTGACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS CCA 90 bp TTCATGGTTCCAGAGGTGTCCTCATCGAACTTGTTAAATATGGCCTaGGCAGGAAGGATGAGTCAGGGCTGCCCTCCATGCCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: FMVPEVSSSNLLNMA*AGRMSQGCPPCPEE
Trigger: CTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCTTCCTGCCCAGGCCATATTTAACAAGTTCGATGAGGACACCTCTGGAACCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS-3UTR CAA 90 bp ACATATCTCTGCCGTCTCTCCTGCTCTCATAATGAAGACATAGCCGATTCTCTGGTGTCCTCATCGAACTaGTTAAATATGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TYLCRLSCSHNEDIADSLVSSSN*LNMARL
Trigger: GAGCCTGGCCATATTTAACAAGTTCGATGAGGACAC...CAGAGAATCGGCTATGTCTTCATTATGAGAGCAGGAGAGACGGCAGAGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594552.5
CDS-3UTR CAA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTGTCTGGGTCAGCTGGTaGTTCAGGTGGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFVWVSW*FRWKPA
Trigger: AGCAGGCTTCCACCTGAACAACCAGCTGACCCAGAC...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000594552.5
ENST00000597987.5
ENST00000601953.5
CDS-3UTR CAA 90 bp TGGTTTCTGGATAAACCACCCTCTGGGGACAGGATAATAAAACATGTAATATTTAAGCCCAGGAACACCTaGTGTGTGCCCGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: WFLDKPPSGDRIIKHVIFKPRNT*CVPVME
Trigger: TTCCATCACGGGCACACACAAGGTGTTCCTGGGCTT...AAATATTACATGTTTTATTATCCTGTCCCCAGAGGGTGGTTTATCCAGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CCA 72 bp GGCGTGGGCGGTGCTCGGCACCACCAGGTAGTGGCCTaGACGCAGGCAGCAGCGGCGGGTCACGTCGCGGCG +
Preference number: 6 (lower is better)
Translates to: GVGGARHHQVVA*TQAAAAGHVAA
Trigger: CGCCGCGACGTGACCCGCCGCTGCTGCCTGCGTCCAGGCCACTACCTGGTGGTGCCGAGCACCGCCCACGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000597716.1
ENST00000601953.5
CDS GCA 72 bp GGTCGGCGCGCAGCAGCCGGGGCAGGAGCGCATGGCTaGGCGGGGAATCCCAGAGGCCCAGCAGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GRRAAAGAGAHG*AGNPRGPAAPL
Trigger: CAGAGGAGCTGCTGGGCCTCTGGGATTCCCCGCGCAGCCATGCGCTCCTGCCCCGGCTGCTGCGCGCCGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328867.9
ENST00000597716.1
ENST00000601953.5
CDS GCA 72 bp CTCAAGGCAGCCTTGCCTTTCAGCGGAAGGGGAGCTTaGGAGCAGCCGTGGCCCAGGTCACGGGGCCCACAC +
Preference number: 6 (lower is better)
Translates to: LKAALPFSGRGA*EQPWPRSRGPH
Trigger: GTGTGGGCCCCGTGACCTGGGCCACGGCTGCTCGCAAGCTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594497.1
ENST00000597716.1
ENST00000601685.1
CDS CCA 72 bp GATCACTCAGGGCAGTGGCGCCCACGAGGGACTCCTTaGCCAGGGCATGGCGCAGGGCAGAGAACAGCCCCA +
Preference number: 6 (lower is better)
Translates to: DHSGQWRPRGTP*PGHGAGQRTAP
Trigger: TGGGGCTGTTCTCTGCCCTGCGCCATGCCCTGGCCAAGGAGTCCCTCGTGGGCGCCACTGCCCTGAGTGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CCA 72 bp GTGAGGCCCTTGGCTCTCAGGCGCCGCCGGTTGCGCTaGATGAGGGACAGAAGGACCGTGCACTTGGGCGTG +
Preference number: 6 (lower is better)
Translates to: VRPLALRRRRLR*MRDRRTVHLGV
Trigger: CACGCCCAAGTGCACGGTCCTTCTGTCCCTCATCCAGCGCAACCGGCGGCGCCTGAGAGCCAAGGGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CCA 72 bp CAGGGCTGCCCTCCATGCCCTGAAGAGGGCTGCCAATaGGGCCTCCCAGGCAAGACAGCCTGGTGCCCATCC +
Preference number: 6 (lower is better)
Translates to: QGCPPCPEEGCQ*GLPGKTAWCPS
Trigger: GGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CAA 72 bp GCTCAAGGCAGCCTTGCCTTTCAGCGGAAGGGGAGCTaGCGAGCAGCCGTGGCCCAGGTCACGGGGCCCACA +
Preference number: 6 (lower is better)
Translates to: AQGSLAFQRKGS*RAAVAQVTGPT
Trigger: TGTGGGCCCCGTGACCTGGGCCACGGCTGCTCGCAAGCTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594497.1
ENST00000597716.1
ENST00000601685.1
CDS GCA 72 bp CTGGGGCCCAGCACCTCCGGGCTCAGCGAGCAGATCTaGACGGTGTCGAAATGGAGGAGGAAGTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: LGPSTSGLSEQI*TVSKWRRKSRS
Trigger: GCTGCGGGACTTCCTCCTCCATTTCGACACCGTGCAGATCTGCTCGCTGAGCCCGGAGGTGCTGGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS GCA 72 bp CAGGAGCCGGGGATACAGAGTAAGGGAGGCGGCAGCTaGAAGGAACCAGCAGTTACCTGGGCCCCGCGGCGA +
Preference number: 6 (lower is better)
Translates to: QEPGIQSKGGGS*KEPAVTWAPRR
Trigger: TCGCCGCGGGGCCCAGGTAACTGCTGGTTCCTTGCAGCTGCCGCCTCCCTTACTCTGTATCCCCGGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601953.5
CDS CAA 90 bp CCAGTCTGTGCTCAAGGCAGCCTTGCCTTTCAGCGGAAGGGGAGCTaGCGAGCAGCCGTGGCCCAGGTCACGGGGCCCACACAAGATCCC +
Preference number: 6 (lower is better)
Translates to: PVCAQGSLAFQRKGS*RAAVAQVTGPTQDP
Trigger: GGGATCTTGTGTGGGCCCCGTGACCTGGGCCACGGCTGCTCGCAAGCTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAGCACAGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594497.1
ENST00000597716.1
ENST00000601685.1
CDS TCA 72 bp TGGCCTCACAAGCCGGCACCAGGCCCTTTAACCTCCTaGGTCACGGGGGCGGGGCCTCTCTTCCATTGGAGC +
Preference number: 6 (lower is better)
Translates to: WPHKPAPGPLTS*VTGAGPLFHWS
Trigger: GCTCCAATGGAAGAGAGGCCCCGCCCCCGTGACTCAGGAGGTTAAAGGGCCTGGTGCCGGCTTGTGAGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328867.9
CDS TCA 72 bp TGGCCCCGAAACACTGCAGCAGCTGCTCACAGGTCCTaGGCCCGATCTCTCTGGGGGTGGAGGTATGGGCCC +
Preference number: 6 (lower is better)
Translates to: WPRNTAAAAHRS*ARSLWGWRYGP
Trigger: GGGCCCATACCTCCACCCCCAGAGAGATCGGGCTCAGGACCTGTGAGCAGCTGCTGCAGTGTTTCGGGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597354.1
CDS GCA 72 bp GCCGCCCCTCCAGGAACAGTCCCCACCTGGAGAGACTaGAGGTCTGCGCTGATCACGTCGTCGATCTCCCTG +
Preference number: 6 (lower is better)
Translates to: AAPPGTVPTWRD*RSALITSSISL
Trigger: CAGGGAGATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTCCAGGTGGGGACTGTTCCTGGAGGGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593700.5
ENST00000597354.1
ENST00000601685.1
CDS GCA 72 bp GCCGCCCCTCCAGGAACAGTCCCCACCTGGAGAGACTaGAGGTCTGCGCTGATCACGTCGTCGATCTCCACG +
Preference number: 6 (lower is better)
Translates to: AAPPGTVPTWRD*RSALITSSIST
Trigger: CGTGGAGATCGACGACGTGATCAGCGCAGACCTGCAGTCTCTCCAGGTGGGGACTGTTCCTGGAGGGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597716.1
CDS TCA 72 bp CATGCCCGAAACACTGCAGCAGCTGCTCACAGGTCCTaGGCCCGATCTCTCTGGGGGTGGAGGTATGGGCCC +
Preference number: 6 (lower is better)
Translates to: HARNTAAAAHRS*ARSLWGWRYGP
Trigger: GGGCCCATACCTCCACCCCCAGAGAGATCGGGCTCAGGACCTGTGAGCAGCTGCTGCAGTGTTTCGGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328867.9
ENST00000593700.5
ENST00000597716.1
ENST00000601953.5
CDS TCA 72 bp GTACCCCGAAACACTGCAGCAGCTGCTCACAGGTCCTaGGCCCGATCTCTCTGGGGGTGGAGGTATGGGCCC +
Preference number: 6 (lower is better)
Translates to: VPRNTAAAAHRS*ARSLWGWRYGP
Trigger: GGGCCCATACCTCCACCCCCAGAGAGATCGGGCTCAGGACCTGTGAGCAGCTGCTGCAGTGTTTCGGGGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 72 bp GGCTGCCAATGGGGCCTCCCAGGCAAGACAGCCTGGTaGCCATCCCAACTCCCTTTCTTCTGGTGTGGACCC +
Preference number: 6 (lower is better)
Translates to: GCQWGLPGKTAW*PSQLPFFWCGP
Trigger: GGGTCCACACCAGAAGAAAGGGAGTTGGGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 72 bp AGGGACTGGCAACAAGCTAAGGTGTGGGCCTGTGGATaGCCACAGTGCAGACGGCCACAGCTGAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RDWQQAKVWACG*PQCRRPQLSRG
Trigger: CCCCCTGCTCAGCTGTGGCCGTCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CCA 72 bp CCAACCCCTGCCAGGGACTGGCAACAAGCTAAGGTGTaGGCCTGTGGATGGCCACAGTGCAGACGGCCACAG +
Preference number: 6 (lower is better)
Translates to: PTPARDWQQAKV*ACGWPQCRRPQ
Trigger: CTGTGGCCGTCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCTGGCAGGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CAA 90 bp ATTCAAATCCAGGCAGGGGGTGCCCAGTCTGTGCTCAAGGCAGCCTaGCCTTTCAGCGGAAGGGGAGCTTGCGAGCAGCCGTGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: IQIQAGGAQSVLKAA*PFSGRGACEQPWPR
Trigger: CCTGGGCCACGGCTGCTCGCAAGCTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAGCACAGACTGGGCACCCCCTGCCTGGATTTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CAA 90 bp GGATTGGTCCAGAAGGTTTCAGCATTAGGCTGGCTCCCGCCGGAGTaGAAGCCACGCACCCAGCGGCCTTGGAAGGTGTGGACGTGCCAG +
Preference number: 6 (lower is better)
Translates to: GLVQKVSALGWLPPE*KPRTQRPWKVWTCQ
Trigger: CTGGCACGTCCACACCTTCCAAGGCCGCTGGGTGCGTGGCTTCAACTCCGGCGGGAGCCAGCCTAATGCTGAAACCTTCTGGACCAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS TCA 72 bp TGGTCAGGGAGAGCTTCCAGGGCTGGGCACCTTAGATaGGACCTGAGCCTGGCTGGAGGTGTCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: WSGRASRAGHLR*DLSLAGGVRRE
Trigger: CTCCCTCCTGACACCTCCAGCCAGGCTCAGGTCTCATCTAAGGTGCCCAGCCCTGGAAGCTCTCCCTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 72 bp TGGCCAGGGCATGGCGCAGGGCAGAGAACAGCCCCATaGTGTTTTGTCTCAGATAGAGCACCTCGCCCACGC +
Preference number: 6 (lower is better)
Translates to: WPGHGAGQRTAP*CFVSDRAPRPR
Trigger: GCGTGGGCGAGGTGCTCTATCTGAGACAAAACAGCATGGGGCTGTTCTCTGCCCTGCGCCATGCCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS GCA 72 bp CTGTCCCCACGACCACCCCAGGACCCTGTCCACACCTaGTGCATTCAGTGCCAGCCTCAGCTCGTAGGAGTT +
Preference number: 6 (lower is better)
Translates to: LSPRPPQDPVHT*CIQCQPQLVGV
Trigger: AACTCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGTGTGGACAGGGTCCTGGGGTGGTCGTGGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CCA 72 bp GAGGGCTGCCAATGGGGCCTCCCAGGCAAGACAGCCTaGTGCCCATCCCAACTCCCTTTCTTCTGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: EGCQWGLPGKTA*CPSQLPFFWCG
Trigger: TCCACACCAGAAGAAAGGGAGTTGGGATGGGCACCAGGCTGTCTTGCCTGGGAGGCCCCATTGGCAGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 72 bp GGCCTCTTTCAGGGTCACCCAACCCCTGCCAGGGACTaGCAACAAGCTAAGGTGTGGGCCTGTGGATGGCCA +
Preference number: 6 (lower is better)
Translates to: GLFQGHPTPARD*QQAKVWACGWP
Trigger: TGGCCATCCACAGGCCCACACCTTAGCTTGTTGCCAGTCCCTGGCAGGGGTTGGGTGACCCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CAA 90 bp CTTGGCCAGGGCATGGCGCAGGGCAGAGAACAGCCCCATGCTGTTTaGTCTCAGATAGAGCACCTCGCCCACGCCGCCTGTGAAATCCAC +
Preference number: 6 (lower is better)
Translates to: LGQGMAQGREQPHAV*SQIEHLAHAACEIH
Trigger: GTGGATTTCACAGGCGGCGTGGGCGAGGTGCTCTATCTGAGACAAAACAGCATGGGGCTGTTCTCTGCCCTGCGCCATGCCCTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS GCA 72 bp TGGAATACGCGTGTCCCTTTACCAGGCCCTCTTCTGTaGGGTACTCACCCCGATCACTCAGGGCAGTGGCGC +
Preference number: 6 (lower is better)
Translates to: WNTRVPLPGPLL*GTHPDHSGQWR
Trigger: GCGCCACTGCCCTGAGTGATCGGGGTGAGTACCGCACAGAAGAGGGCCTGGTAAAGGGACACGCGTATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS GCA 72 bp CTGGGATTCAAATCCAGGCAGGGGGTGCCCAGTCTGTaGTCAAGGCAGCCTTGCCTTTCAGCGGAAGGGGAG +
Preference number: 6 (lower is better)
Translates to: LGFKSRQGVPSL*SRQPCLSAEGE
Trigger: CTCCCCTTCCGCTGAAAGGCAAGGCTGCCTTGAGCACAGACTGGGCACCCCCTGCCTGGATTTGAATCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS GCA 72 bp TCCCCACGACCACCCCAGGACCCTGTCCACACCTGCTaGATTCAGTGCCAGCCTCAGCTCGTAGGAGTTCAT +
Preference number: 6 (lower is better)
Translates to: SPRPPQDPVHTC*IQCQPQLVGVH
Trigger: ATGAACTCCTACGAGCTGAGGCTGGCACTGAATGCAGCAGGTGTGGACAGGGTCCTGGGGTGGTCGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 72 bp CAACAAGCTAAGGTGTGGGCCTGTGGATGGCCACAGTaGAGACGGCCACAGCTGAGCAGGGGGACTTGGAGA +
Preference number: 6 (lower is better)
Translates to: QQAKVWACGWPQ*RRPQLSRGTWR
Trigger: TCTCCAAGTCCCCCTGCTCAGCTGTGGCCGTCTGCACTGTGGCCATCCACAGGCCCACACCTTAGCTTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CCA 72 bp TCCGGGCTCAGCGAGCAGATCTGCACGGTGTCGAAATaGAGGAGGAAGTCCCGCAGCTCCATCCAGAACTCG +
Preference number: 6 (lower is better)
Translates to: SGLSEQICTVSK*RRKSRSSIQNS
Trigger: CGAGTTCTGGATGGAGCTGCGGGACTTCCTCCTCCATTTCGACACCGTGCAGATCTGCTCGCTGAGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CCA 72 bp AACTCCCAGCAGCGCGGTGGGTTCATAGACATAGGGTaGCACCGGCTCTGGTTGCAGGACCCCTGGCTAAGA +
Preference number: 6 (lower is better)
Translates to: NSQQRGGFIDIG*HRLWLQDPWLR
Trigger: TCTTAGCCAGGGGTCCTGCAACCAGAGCCGGTGCCACCCTATGTCTATGAACCCACCGCGCTGCTGGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594497.1
ENST00000597716.1
ENST00000601685.1
CDS GCA 72 bp TTAAATATGGCCTGGGCAGGAAGGATGAGTCAGGGCTaGCCTCCATGCCCTGAAGAGGGCTGCCAATGGGGC +
Preference number: 6 (lower is better)
Translates to: LNMAWAGRMSQG*PPCPEEGCQWG
Trigger: GCCCCATTGGCAGCCCTCTTCAGGGCATGGAGGGCAGCCCTGACTCATCCTTCCTGCCCAGGCCATATTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS GCA 72 bp GGAAAGAGGGCTTGTGAGGCCATTTACTCATCCAGCTaGTCTGGGCCAAGCCCTGTGCTAGGGACACGGCAG +
Preference number: 6 (lower is better)
Translates to: GKRACEAIYSSS*SGPSPVLGTRQ
Trigger: CTGCCGTGTCCCTAGCACAGGGCTTGGCCCAGAGCAGCTGGATGAGTAAATGGCCTCACAAGCCCTCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS GCA 72 bp AGCTGCTGGAAGTGGTGTAAGGCCAGGCTTTGCCCATaGTGTGTTGGGGGTCGGGGGCATCTGGTTAAGGTC +
Preference number: 6 (lower is better)
Translates to: SCWKWCKARLCP*CVGGRGHLVKV
Trigger: GACCTTAACCAGATGCCCCCGACCCCCAACACAGCATGGGCAAAGCCTGGCCTTACACCACTTCCAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CCA 72 bp AGCCTGGTGCCCATCCCAACTCCCTTTCTTCTGGTGTaGACCCCCAGCAAGCAGCCTAGCCACTTGGGACTT +
Preference number: 6 (lower is better)
Translates to: SLVPIPTPFLLV*TPSKQPSHLGL
Trigger: AAGTCCCAAGTGGCTAGGCTGCTTGCTGGGGGTCCACACCAGAAGAAAGGGAGTTGGGATGGGCACCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS CCA 72 bp CTCCAAGTCAGCCTAGTCCAGTACCCCCTCGTTCCCTaGGGACCTGATAGCCCACAGGGTGCCTATGTCTCT +
Preference number: 6 (lower is better)
Translates to: LQVSLVQYPLVP*GPDSPQGAYVS
Trigger: AGAGACATAGGCACCCTGTGGGCTATCAGGTCCCCAGGGAACGAGGGGGTACTGGACTAGGCTGACTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS CCA 72 bp ATGAACTTCGGCTCAGCACAGAACTCCTGTGGGTGGTaGGGGATTCCAGGCCTCAGCATGGGGCCTCATCCA +
Preference number: 6 (lower is better)
Translates to: MNFGSAQNSCGW*GIPGLSMGPHP
Trigger: TGGATGAGGCCCCATGCTGAGGCCTGGAATCCCCCACCACCCACAGGAGTTCTGTGCTGAGCCGAAGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS CCA 72 bp CAGATGAACTTCGGCTCAGCACAGAACTCCTGTGGGTaGTGGGGGATTCCAGGCCTCAGCATGGGGCCTCAT +
Preference number: 6 (lower is better)
Translates to: QMNFGSAQNSCG*WGIPGLSMGPH
Trigger: ATGAGGCCCCATGCTGAGGCCTGGAATCCCCCACCACCCACAGGAGTTCTGTGCTGAGCCGAAGTTCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS CAA 90 bp ACTCCCTTTCTTCTGGTGTGGACCCCCAGCAAGCAGCCTAGCCACTaGGGACTTCTGTTTCCCAATCTGCCACTCCAGGAGGTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: TPFLLVWTPSKQPSH*GLLFPNLPLQEVAP
Trigger: TGGGGCTACCTCCTGGAGTGGCAGATTGGGAAACAGAAGTCCCAAGTGGCTAGGCTGCTTGCTGGGGGTCCACACCAGAAGAAAGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597716.1
CDS CAA 90 bp AGAGCTGCTGGAAGTGGTGTAAGGCCAGGCTTTGCCCATGCTGTGTaGGGGGTCGGGGGCATCTGGTTAAGGTCAATCTCTCCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: RAAGSGVRPGFAHAV*GVGGIWLRSISPEG
Trigger: CCCTTCTGGAGAGATTGACCTTAACCAGATGCCCCCGACCCCCAACACAGCATGGGCAAAGCCTGGCCTTACACCACTTCCAGCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS TCA 72 bp TTTGTCTCAGATAGAGCACCTCGCCCACGCCGCCTGTaGAATCCACAAAAGCCTCATTCATGTGGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: FVSDRAPRPRRL*NPQKPHSCGRP
Trigger: GGGGCGGCCACATGAATGAGGCTTTTGTGGATTTCACAGGCGGCGTGGGCGAGGTGCTCTATCTGAGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000601953.5
CDS CAA 72 bp GGAAGTGGTGTAAGGCCAGGCTTTGCCCATGCTGTGTaGGGGGTCGGGGGCATCTGGTTAAGGTCAATCTCT +
Preference number: 6 (lower is better)
Translates to: GSGVRPGFAHAV*GVGGIWLRSIS
Trigger: AGAGATTGACCTTAACCAGATGCCCCCGACCCCCAACACAGCATGGGCAAAGCCTGGCCTTACACCACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601685.1
CDS TCA 72 bp CCTGACACACGTCTGTGCGGCTCATGTCTTCACAGATaGACTTCGGCTCAGCACAGAACTCATGGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: PDTRLCGSCLHR*TSAQHRTHGAS
Trigger: TGAGGCCCCATGAGTTCTGTGCTGAGCCGAAGTTCATCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328867.9
ENST00000598684.5
CDS TCA 72 bp GTCCCATATTATAGAAGCCGAGGCACAGGGAGCCAGTaGCTGCTGCGCCTAGCAGAGCTGGGATTCAAATCC +
Preference number: 6 (lower is better)
Translates to: VPYYRSRGTGSQ*LLRLAELGFKS
Trigger: GGATTTGAATCCCAGCTCTGCTAGGCGCAGCAGTCACTGGCTCCCTGTGCCTCGGCTTCTATAATATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS TCA 72 bp CCTGACACACGTCTGTGCGGCTCATGTCTTCACAGATaGACTTCGGCTCAGCACAGAACTCCTGTGGGTGGT +
Preference number: 6 (lower is better)
Translates to: PDTRLCGSCLHR*TSAQHRTPVGG
Trigger: ACCACCCACAGGAGTTCTGTGCTGAGCCGAAGTTCATCTGTGAAGACATGAGCCGCACAGACGTGTGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597740.1
CDS CAA 72 bp GGGCTGGGTGGATGTGACTCCCTTAAGCAGGTGATGTaGTCAGTCCCATATTATAGAAGCCGAGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: GLGGCDSLKQVM*SVPYYRSRGTG
Trigger: CCCTGTGCCTCGGCTTCTATAATATGGGACTGACAACATCACCTGCTTAAGGGAGTCACATCCACCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1
CDS TCA 72 bp TTTAAGGGCTGGGTGGATGTGACTCCCTTAAGCAGGTaGTGTTGTCAGTCCCATATTATAGAAGCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: FKGWVDVTPLSR*CCQSHIIEAEA
Trigger: TGCCTCGGCTTCTATAATATGGGACTGACAACATCACCTGCTTAAGGGAGTCACATCCACCCAGCCCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597716.1
ENST00000601685.1