Pregenerated sensors for CAPN10-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000260942Ensembl transcript IDs: ENST00000567819.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGGCGGTCCCGACACCCCGGCCCGAGCCTCACCGGCTGGAGGACTaGACGCCTGCCGGCCCTCCGGGTATGAGCGGAGGCCGGGATAGC | + |
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Preference number: 5 (lower is better) Translates to: QAVPTPRPEPHRLED*TPAGPPGMSGGRDS Trigger: GCTATCCCGGCCTCCGCTCATACCCGGAGGGCCGGCAGGCGTTCAGTCCTCCAGCCGGTGAGGCTCGGGCCGGGGTGTCGGGACCGCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | CCGCCGCCCGACCACGAAAGAGCGGAGCTCGGGAGCCCCGCCCCCTaGGCCTCCGACGTCCGTGGCGCTTTCCGTCGCGCGAGTGCGATT | + |
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Preference number: 5 (lower is better) Translates to: PPPDHERAELGSPAP*ASDVRGAFRRASAI Trigger: AATCGCACTCGCGCGACGGAAAGCGCCACGGACGTCGGAGGCCCAGGGGGCGGGGCTCCCGAGCTCCGCTCTTTCGTGGTCGGGCGGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | AAGAGCGGAGCTCGGGAGCCCCGCCCCCTGGGCCTCCGACGTCCGTaGCGCTTTCCGTCGCGCGAGTGCGATTGGGCCGCCTGTCACGTG | + |
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Preference number: 5 (lower is better) Translates to: KSGAREPRPLGLRRP*RFPSRECDWAACHV Trigger: CACGTGACAGGCGGCCCAATCGCACTCGCGCGACGGAAAGCGCCACGGACGTCGGAGGCCCAGGGGGCGGGGCTCCCGAGCTCCGCTCTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 90 bp | GACGACGGCGGCAGGAACTCGACCGGCGCCGGACAGCTCGCAACTTaGCTTACCAAGCGTAAATCTCGGTTCCTCCCAACTACCCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: DDGGRNSTGAGQLAT*LTKRKSRFLPTTRG Trigger: GCCGCGGGTAGTTGGGAGGAACCGAGATTTACGCTTGGTAAGGCAAGTTGCGAGCTGTCCGGCGCCGGTCGAGTTCCTGCCGCCGTCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | TTGAGCCAGGTGGTCACTCCCTTTTCCAGAACCACAGCAAGAAGTTaGGCCTGCTGGGCTCCTAACGAAGGCCCTGGGGCCCGGTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LSQVVTPFSRTTARS*ACWAPNEGPGARWD Trigger: ATCCCACCGGGCCCCAGGGCCTTCGTTAGGAGCCCAGCAGGCTCAACTTCTTGCTGTGGTTCTGGAAAAGGGAGTGACCACCTGGCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | AGGCCACTGGCCAGCAGTGGGGTCATGGCGGGAACTAGTCCCACCTaGAGGACTCTCATCTCCCTACAATCCCCAAACGCTGAGGCATGG | + |
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Preference number: 5 (lower is better) Translates to: RPLASSGVMAGTSPT*RTLISLQSPNAEAW Trigger: CCATGCCTCAGCGTTTGGGGATTGTAGGGAGATGAGAGTCCTTCAGGTGGGACTAGTTCCCGCCATGACCCCACTGCTGGCCAGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | TGCTGCCTACCCAGCACCAGCTGTCTCTTGGCCCCTTCCAGATCCTaGCAATCTGGCTACAGGCATGGGCCCAGCCTTGGACACAGATGT | + |
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Preference number: 5 (lower is better) Translates to: CCLPSTSCLLAPSRS*QSGYRHGPSLGHRC Trigger: ACATCTGTGTCCAAGGCTGGGCCCATGCCTGTAGCCAGATTGCCAGGATCTGGAAGGGGCCAAGAGACAGCTGGTGCTGGGTAGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | CCTCGAGCAGGTCCCAGGATCACTATCCTCACCTCCCCGCGGCACTaGATGGCTATAGCTGTAAATGTGCGTCCACGGGGTCACTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PRAGPRITILTSPRH*MAIAVNVRPRGHCP Trigger: TGGACAGTGACCCCGTGGACGCACATTTACAGCTATAGCCATTCAGTGCCGCGGGGAGGTGAGGATAGTGATCCTGGGACCTGCTCGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | GACCGCCTTCATTCCTGGGAATGGAACAGGTTCTTGGGGCAAGGGTaGATCCTCGAGCAGGTCCCAGGATCACTATCCTCACCTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: DRLHSWEWNRFLGQG*ILEQVPGSLSSPPR Trigger: GCGGGGAGGTGAGGATAGTGATCCTGGGACCTGCTCGAGGATTCACCCTTGCCCCAAGAACCTGTTCCATTCCCAGGAATGAAGGCGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | CAGACCACATGCAAATCACAGCATGGGGTAATAGTGGGGGCAGGTTaGCACAGGGCTGCTGCCTACCCAGCACCAGCTGTCTCTTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QTTCKSQHGVIVGAG*HRAAAYPAPAVSWP Trigger: GGGCCAAGAGACAGCTGGTGCTGGGTAGGCAGCAGCCCTGTGTCAACCTGCCCCCACTATTACCCCATGCTGTGATTTGCATGTGGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | CTCCCCTGCCTGACCGCCTTCATTCCTGGGAATGGAACAGGTTCTTaGGGCAAGGGTGAATCCTCGAGCAGGTCCCAGGATCACTATCCT | + |
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Preference number: 5 (lower is better) Translates to: LPCLTAFIPGNGTGS*GKGESSSRSQDHYP Trigger: AGGATAGTGATCCTGGGACCTGCTCGAGGATTCACCCTTGCCCCAAGAACCTGTTCCATTCCCAGGAATGAAGGCGGTCAGGCAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | CTGGCAATCTGGCTACAGGCATGGGCCCAGCCTTGGACACAGATGTaGCCACAGGAAGCTGTTAGCTCTCCAGATCTGATCAGCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LAIWLQAWAQPWTQM*PQEAVSSPDLISLG Trigger: TCCCAGGCTGATCAGATCTGGAGAGCTAACAGCTTCCTGTGGCCACATCTGTGTCCAAGGCTGGGCCCATGCCTGTAGCCAGATTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | GTTGATTCCACAGGGCTCCTCCTCAACACCCATGAACCTGAGAAGTaGTCAGATGCGTTTCAGGCCACTGGCCAGCAGTGGGGTCATGGC | + |
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Preference number: 5 (lower is better) Translates to: VDSTGLLLNTHEPEK*SDAFQATGQQWGHG Trigger: GCCATGACCCCACTGCTGGCCAGTGGCCTGAAACGCATCTGACCACTTCTCAGGTTCATGGGTGTTGAGGAGGAGCCCTGTGGAATCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 90 bp | GAAGTGGTCAGATGCGTTTCAGGCCACTGGCCAGCAGTGGGGTCATaGCGGGAACTAGTCCCACCTGAAGGACTCTCATCTCCCTACAAT | + |
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Preference number: 5 (lower is better) Translates to: EVVRCVSGHWPAVGS*RELVPPEGLSSPYN Trigger: ATTGTAGGGAGATGAGAGTCCTTCAGGTGGGACTAGTTCCCGCCATGACCCCACTGCTGGCCAGTGGCCTGAAACGCATCTGACCACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | CTTGGACACAGATGTGGCCACAGGAAGCTGTTAGCTCTCCAGATCTaGTCAGCCTGGGAGAGCGGCACAACAAAGGCTCCCAAAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: LGHRCGHRKLLALQI*SAWESGTTKAPKGE Trigger: CTCTCCTTTGGGAGCCTTTGTTGTGCCGCTCTCCCAGGCTGATCAGATCTGGAGAGCTAACAGCTTCCTGTGGCCACATCTGTGTCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 90 bp | AGTCGGGATCCTCAGCTAGCCTCAGCTCTGCTACCCACCCATATGTaGCCAGAACAGGAAAGATACGTGTTTCTTACTCCTCCGGGACTC | + |
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Preference number: 5 (lower is better) Translates to: SRDPQLASALLPTHM*PEQERYVFLTPPGL Trigger: GAGTCCCGGAGGAGTAAGAAACACGTATCTTTCCTGTTCTGGGCACATATGGGTGGGTAGCAGAGCTGAGGCTAGCTGAGGATCCCGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 90 bp | GGTGGAAATTTCAAGATTGGGCAGCTGCACCTGGTGAGGGCCTCATaGTACTTCAACTCAAGGCAGCAAGTAGAAGGGGAGAGGCATGCA | + |
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Preference number: 5 (lower is better) Translates to: GGNFKIGQLHLVRAS*YFNSRQQVEGERHA Trigger: TGCATGCCTCTCCCCTTCTACTTGCTGCCTTGAGTTGAAGTAGCATGAGGCCCTCACCAGGTGCAGCTGCCCAATCTTGAAATTTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | ACCCAAACTCCTCCTACTAGGCACCACCTCCTAACACTGCCTCATTaGGGCTCAAATTTCAATACCATTTTGGGCAGGGGCAGACCACAT | + |
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Preference number: 5 (lower is better) Translates to: TQTPPTRHHLLTLPH*GSNFNTILGRGRPH Trigger: ATGTGGTCTGCCCCTGCCCAAAATGGTATTGAAATTTGAGCCTCAATGAGGCAGTGTTAGGAGGTGGTGCCTAGTAGGAGGAGTTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | GGCCTATGTCCTATGGAGAAGGTATTTCCTATCATAACTGAAGTGTaGATCAGCCTATGTTCCCTGCACTCAGACCCTATTTTCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: GLCPMEKVFPIITEV*ISLCSLHSDPIFLP Trigger: AGGCAGGAAAATAGGGTCTGAGTGCAGGGAACATAGGCTGATTCACACTTCAGTTATGATAGGAAATACCTTCTCCATAGGACATAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | GATTCCATTGGTTACTTGGGGCACACGTTATGCAGATGGAGAGGATaGAGTTACAAAGTCATTTGCTTGGCCTATGTCCTATGGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: DSIGYLGHTLCRWRG*SYKVICLAYVLWRR Trigger: CCTTCTCCATAGGACATAGGCCAAGCAAATGACTTTGTAACTTCATCCTCTCCATCTGCATAACGTGTGCCCCAAGTAACCAATGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 90 bp | TTTGCTTGGCCTATGTCCTATGGAGAAGGTATTTCCTATCATAACTaGAGTGTGAATCAGCCTATGTTCCCTGCACTCAGACCCTATTTT | + |
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Preference number: 5 (lower is better) Translates to: FAWPMSYGEGISYHN*SVNQPMFPALRPYF Trigger: AAAATAGGGTCTGAGTGCAGGGAACATAGGCTGATTCACACTTCAGTTATGATAGGAAATACCTTCTCCATAGGACATAGGCCAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | GCTCGGGAGCCCCGCCCCCTGGGCCTCCGACGTCCGTaGCGCTTTCCGTCGCGCGAGTGCGATTGGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AREPRPLGLRRP*RFPSRECDWAA Trigger: GGCGGCCCAATCGCACTCGCGCGACGGAAAGCGCCACGGACGTCGGAGGCCCAGGGGGCGGGGCTCCCGAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | GGCTGGAGGACTGAACGCCTGCCGGCCCTCCGGGTATaGGCGGAGGCCGGGATAGCCCTGGGCTCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GWRTERLPALRV*AEAGIALGSAA Trigger: GGCGGCGGAGCCCAGGGCTATCCCGGCCTCCGCTCATACCCGGAGGGCCGGCAGGCGTTCAGTCCTCCAGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | CCGACACCCCGGCCCGAGCCTCACCGGCTGGAGGACTaGACGCCTGCCGGCCCTCCGGGTATGAGCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PTPRPEPHRLED*TPAGPPGMSGG Trigger: GCCTCCGCTCATACCCGGAGGGCCGGCAGGCGTTCAGTCCTCCAGCCGGTGAGGCTCGGGCCGGGGTGTCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 72 bp | GGCCTCCGACGTCCGTGGCGCTTTCCGTCGCGCGAGTaGGATTGGGCCGCCTGTCACGTGACCCGAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: GLRRPWRFPSRE*DWAACHVTRDP Trigger: GGGGTCTCGGGTCACGTGACAGGCGGCCCAATCGCACTCGCGCGACGGAAAGCGCCACGGACGTCGGAGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CAA 90 bp | GGCAGGTTGACACAGGGCTGCTGCCTACCCAGCACCAGCTGTCTCTaGGCCCCTTCCAGATCCTGGCAATCTGGCTACAGGCATGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GRLTQGCCLPSTSCL*APSRSWQSGYRHGP Trigger: GGGCCCATGCCTGTAGCCAGATTGCCAGGATCTGGAAGGGGCCAAGAGACAGCTGGTGCTGGGTAGGCAGCAGCCCTGTGTCAACCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 72 bp | GGCAGGAACTCGACCGGCGCCGGACAGCTCGCAACTTaGCTTACCAAGCGTAAATCTCGGTTCCTCCCAACT | + |
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Preference number: 6 (lower is better) Translates to: GRNSTGAGQLAT*LTKRKSRFLPT Trigger: AGTTGGGAGGAACCGAGATTTACGCTTGGTAAGGCAAGTTGCGAGCTGTCCGGCGCCGGTCGAGTTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | GGTCCCAGGATCACTATCCTCACCTCCCCGCGGCACTaGATGGCTATAGCTGTAAATGTGCGTCCACGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GPRITILTSPRH*MAIAVNVRPRG Trigger: ACCCCGTGGACGCACATTTACAGCTATAGCCATTCAGTGCCGCGGGGAGGTGAGGATAGTGATCCTGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | GCCAGCAGTGGGGTCATGGCGGGAACTAGTCCCACCTaGAGGACTCTCATCTCCCTACAATCCCCAAACGCT | + |
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Preference number: 6 (lower is better) Translates to: ASSGVMAGTSPT*RTLISLQSPNA Trigger: AGCGTTTGGGGATTGTAGGGAGATGAGAGTCCTTCAGGTGGGACTAGTTCCCGCCATGACCCCACTGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | ACTCTCATCTCCCTACAATCCCCAAACGCTGAGGCATaGGGATGCTCTTCCCTCCTTGAAGTGAGGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TLISLQSPNAEA*GCSSLLEVRAP Trigger: CGGGGCCCTCACTTCAAGGAGGGAAGAGCATCCCCATGCCTCAGCGTTTGGGGATTGTAGGGAGATGAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | AGATGCGTTTCAGGCCACTGGCCAGCAGTGGGGTCATaGCGGGAACTAGTCCCACCTGAAGGACTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RCVSGHWPAVGS*RELVPPEGLSS Trigger: AGATGAGAGTCCTTCAGGTGGGACTAGTTCCCGCCATGACCCCACTGCTGGCCAGTGGCCTGAAACGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | ACAGGGCTCCTCCTCAACACCCATGAACCTGAGAAGTaGTCAGATGCGTTTCAGGCCACTGGCCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TGLLLNTHEPEK*SDAFQATGQQW Trigger: CCACTGCTGGCCAGTGGCCTGAAACGCATCTGACCACTTCTCAGGTTCATGGGTGTTGAGGAGGAGCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | AGATGTGGCCACAGGAAGCTGTTAGCTCTCCAGATCTaGTCAGCCTGGGAGAGCGGCACAACAAAGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RCGHRKLLALQI*SAWESGTTKAP Trigger: GGGAGCCTTTGTTGTGCCGCTCTCCCAGGCTGATCAGATCTGGAGAGCTAACAGCTTCCTGTGGCCACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | GGCGAGAGAGGAAGCAAGAGACAACCGCAGGAAGGCTaGCTCTCTAACCAGCTCTCATGGGAACTCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: GERGSKRQPQEG*LSNQLSWELTP Trigger: AGGGGTGAGTTCCCATGAGAGCTGGTTAGAGAGTCAGCCTTCCTGCGGTTGTCTCTTGCTTCCTCTCTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | CTGACCGCCTTCATTCCTGGGAATGGAACAGGTTCTTaGGGCAAGGGTGAATCCTCGAGCAGGTCCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LTAFIPGNGTGS*GKGESSSRSQD Trigger: ATCCTGGGACCTGCTCGAGGATTCACCCTTGCCCCAAGAACCTGTTCCATTCCCAGGAATGAAGGCGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CAA 72 bp | CCGGGACTCCTAGGTGAAGCTGAGACCAGGCTCTTCTaGAGTCCTCTCAGCTATGGTGCAACCACCAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: PGLLGEAETRLF*SPLSYGATTSL Trigger: TAGGCTGGTGGTTGCACCATAGCTGAGAGGACTCAAGAAGAGCCTGGTCTCAGCTTCACCTAGGAGTCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 72 bp | ATCTGGGCAGTGAGGCATCCCACAGGTGTTGGGCTATaGAGTCACTCCCTTTCTCAGACCGAGGCAAGTACA | + |
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Preference number: 6 (lower is better) Translates to: IWAVRHPTGVGL*SHSLSQTEAST Trigger: TGTACTTGCCTCGGTCTGAGAAAGGGAGTGACTGCATAGCCCAACACCTGTGGGATGCCTCACTGCCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | GGGGAGAGGCATGCACAAAGAGATTACGTGGCCATATaGCGAGAGAGGAAGCAAGAGACAACCGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GERHAQRDYVAI*RERKQETTAGR Trigger: CCTTCCTGCGGTTGTCTCTTGCTTCCTCTCTCGCCATATGGCCACGTAATCTCTTTGTGCATGCCTCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | GCAATGAAGCATCCCGGAGATGAAACATCTGGGCAGTaGGGCATCCCACAGGTGTTGGGCTATGCAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: AMKHPGDETSGQ*GIPQVLGYAVT Trigger: AGTGACTGCATAGCCCAACACCTGTGGGATGCCTCACTGCCCAGATGTTTCATCTCCGGGATGCTTCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 72 bp | TTCAAGATTGGGCAGCTGCACCTGGTGAGGGCCTCATaGTACTTCAACTCAAGGCAGCAAGTAGAAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FKIGQLHLVRAS*YFNSRQQVEGE Trigger: CTCCCCTTCTACTTGCTGCCTTGAGTTGAAGTAGCATGAGGCCCTCACCAGGTGCAGCTGCCCAATCTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | GGTTCGAGAAGGACCCTACCCCCACTGTGCCCGACCTaGGACAAATCCACAGAAAAGCAATCCTTGCTAACT | + |
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Preference number: 6 (lower is better) Translates to: GSRRTLPPLCPT*DKSTEKQSLLT Trigger: AGTTAGCAAGGATTGCTTTTCTGTGGATTTGTCTCAGGTCGGGCACAGTGGGGGTAGGGTCCTTCTCGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | TCTTCCGGAAGAGTCAGCACCATAGAGGGTGCTGAATaGGCAATGAAGCATCCCGGAGATGAAACATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SSGRVSTIEGAE*AMKHPGDETSG Trigger: CCCAGATGTTTCATCTCCGGGATGCTTCATTGCCCATTCAGCACCCTCTATGGTGCTGACTCTTCCGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS TCA 72 bp | CCTCCTACTAGGCACCACCTCCTAACACTGCCTCATTaGGGCTCAAATTTCAATACCATTTTGGGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PPTRHHLLTLPH*GSNFNTILGRG Trigger: GCCCCTGCCCAAAATGGTATTGAAATTTGAGCCTCAATGAGGCAGTGTTAGGAGGTGGTGCCTAGTAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 72 bp | TGCCCCCAGTTAAGATGTAGAGCGTTCAACCTAAAATaGCTAGAAACAAAGCCCAGGCCCGGGAAGGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: CPQLRCRAFNLK*LETKPRPGKVE Trigger: TTCGACCTTCCCGGGCCTGGGCTTTGTTTCTAGGCATTTTAGGTTGAACGCTCTACATCTTAACTGGGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS GCA 72 bp | CTTCAACTCAAGGCAGCAAGTAGAAGGGGAGAGGCATaGACAAAGAGATTACGTGGCCATATGGCGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LQLKAASRRGEA*TKRLRGHMARE Trigger: CTCTCTCGCCATATGGCCACGTAATCTCTTTGTGCATGCCTCTCCCCTTCTACTTGCTGCCTTGAGTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | CACTGCCTCATTGAGGCTCAAATTTCAATACCATTTTaGGCAGGGGCAGACCACATGCAAATCACAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: HCLIEAQISIPF*AGADHMQITAW Trigger: CCATGCTGTGATTTGCATGTGGTCTGCCCCTGCCCAAAATGGTATTGAAATTTGAGCCTCAATGAGGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CAA 72 bp | AACCCTCTTCACTTTTCTTGGAGAACTGACCATGGGTaGCAGCAAAGCCTAAAATGGTTCCTGTTTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: NPLHFSWRTDHG*QQSLKWFLFQP Trigger: GGGCTGAAACAGGAACCATTTTAGGCTTTGCTGCAACCCATGGTCAGTTCTCCAAGAAAAGTGAAGAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | TTATTTGGCTCAAAATTCTGGTGGAAATTTCAAGATTaGGCAGCTGCACCTGGTGAGGGCCTCATGCTACTT | + |
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Preference number: 6 (lower is better) Translates to: LFGSKFWWKFQD*AAAPGEGLMLL Trigger: AAGTAGCATGAGGCCCTCACCAGGTGCAGCTGCCCAATCTTGAAATTTCCACCAGAATTTTGAGCCAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CAA 90 bp | GGGGCACACGTTATGCAGATGGAGAGGATGAAGTTACAAAGTCATTaGCTTGGCCTATGTCCTATGGAGAAGGTATTTCCTATCATAACT | + |
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Preference number: 6 (lower is better) Translates to: GAHVMQMERMKLQSH*LGLCPMEKVFPIIT Trigger: AGTTATGATAGGAAATACCTTCTCCATAGGACATAGGCCAAGCAAATGACTTTGTAACTTCATCCTCTCCATCTGCATAACGTGTGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | GATTCCATTGGTTACTTGGGGCACACGTTATGTAGATaGAGAGCCTGTTACAGAACTTCTGAGAGTTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: DSIGYLGHTLCR*RACYRTSESLN Trigger: GTTTAAACTCTCAGAAGTTCTGTAACAGGCTCTCCATCTACATAACGTGTGCCCCAAGTAACCAATGGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CCA 72 bp | GCAGATGGAGAGGATGAAGTTACAAAGTCATTTGCTTaGCCTATGTCCTATGGAGAAGGTATTTCCTATCAT | + |
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Preference number: 6 (lower is better) Translates to: ADGEDEVTKSFA*PMSYGEGISYH Trigger: ATGATAGGAAATACCTTCTCCATAGGACATAGGCCAAGCAAATGACTTTGTAACTTCATCCTCTCCATCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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| CDS CAA 72 bp | GTTATGCAGATGGAGAGGATGAAGTTACAAAGTCATTaGCTTGGCCTATGTCCTATGGAGAAGGTATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VMQMERMKLQSH*LGLCPMEKVFP Trigger: AGGAAATACCTTCTCCATAGGACATAGGCCAAGCAAATGACTTTGTAACTTCATCCTCTCCATCTGCATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567819.1 |
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