Pregenerated sensors for CAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000131236Ensembl transcript IDs: ENST00000372797.7, ENST00000372802.5, ENST00000414281.5, ENST00000417287.5, ENST00000420216.5, ENST00000421589.5, ENST00000424977.1, ENST00000427843.5, ENST00000461993.1, ENST00000494114.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACACTGGATACTCGGGTGGGTTGGGATGGGTCCTGAAAAGAACTTaGTTGAAGAGCCAACCCTTCTTCTGCCACGTCCAAAGCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: DTGYSGGLGWVLKRT*LKSQPFFCHVQSSS Trigger: TGAGCTGCTTTGGACGTGGCAGAAGAAGGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTATCCAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS CCA 90 bp | AAGCTCACAGATGCGCAAGACACTGGATACTCGGGTGGGTTGGGATaGGTCCTGAAAAGAACTTGCTTGAAGAGCCAACCCTTCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: KLTDAQDTGYSGGLG*VLKRTCLKSQPFFC Trigger: GCAGAAGAAGGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTATCCAGTGTCTTGCGCATCTGTGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 90 bp | AGTCGCAGGAAAAGGTTTCCTGTTTCACGTGACTCAGCAACTACATaGAAAGCTCACAGATGCGCAAGACACTGGATACTCGGGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: SRRKRFPVSRDSATT*KAHRCARHWILGWV Trigger: AACCCACCCGAGTATCCAGTGTCTTGCGCATCTGTGAGCTTTTCATGTAGTTGCTGAGTCACGTGAAACAGGAAACCTTTTCCTGCGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 90 bp | GGGAAGGACAACAGTAAGTCGCAGGAAAAGGTTTCCTGTTTCACGTaGCTCAGCAACTACATGAAAAGCTCACAGATGCGCAAGACACTG | + |
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Preference number: 5 (lower is better) Translates to: GKDNSKSQEKVSCFT*LSNYMKSSQMRKTL Trigger: CAGTGTCTTGCGCATCTGTGAGCTTTTCATGTAGTTGCTGAGTCACGTGAAACAGGAAACCTTTTCCTGCGACTTACTGTTGTCCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS GCA 90 bp | GGATGGGTCCTGAAAAGAACTTGCTTGAAGAGCCAACCCTTCTTCTaGCACGTCCAAAGCAGCTCAGCTTACAGACTTTGTAGAATCAGA | + |
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Preference number: 5 (lower is better) Translates to: GWVLKRTCLKSQPFF*HVQSSSAYRLCRIR Trigger: TCTGATTCTACAAAGTCTGTAAGCTGAGCTGCTTTGGACGTGGCAGAAGAAGGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 90 bp | TCAGATTCCCACCAAAGCAACATCTGTGGGTCTACCATGTCTCTTTaGATTAATTCCTCAGGGACAAAAAGAAGGAGCCAAAATATCGAG | + |
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Preference number: 5 (lower is better) Translates to: SDSHQSNICGSTMSL*INSSGTKRRSQNIE Trigger: CTCGATATTTTGGCTCCTTCTTTTTGTCCCTGAGGAATTAATTCAAAGAGACATGGTAGACCCACAGATGTTGCTTTGGTGGGAATCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 90 bp | GTAAGAACAACAGCTACCTTGTTCCTGTCCTTCATACCAGACCTTTaGGCTGCTATCGTCATGTTAAACATCCTTAACAGAAAATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VRTTATLFLSFIPDL*AAIVMLNILNRKFK Trigger: TTTGAATTTTCTGTTAAGGATGTTTAACATGACGATAGCAGCTCAAAGGTCTGGTATGAAGGACAGGAACAAGGTAGCTGTTGTTCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461993.1 |
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| CDS CCA 72 bp | CCCACCGGAAATGAGCCGCCGGCTGAAGCGCTAGGCTaGCCCGCGACTGGGCAGGAAGTCTCACCGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PTGNEPPAEALG*PATGQEVSPPR Trigger: GCGGGGCGGTGAGACTTCCTGCCCAGTCGCGGGCCAGCCTAGCGCTTCAGCCGGCGGCTCATTTCCGGTGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372797.7 ENST00000372802.5 ENST00000421589.5 |
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| CDS CCA 72 bp | CCCGGAGAGAGCGGCCCGGCTCTCACAGAGGGCACTTaGGAAAGAGCCCCGCCCTCAAGGCGGGAGCGACAC | + |
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Preference number: 6 (lower is better) Translates to: PGESGPALTEGT*ERAPPSRRERH Trigger: GTGTCGCTCCCGCCTTGAGGGCGGGGCTCTTTCCCAAGTGCCCTCTGTGAGAGCCGGGCCGCTCTCTCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372797.7 ENST00000372802.5 |
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| CDS CAA 72 bp | CCCCGGAGAGAGCGGCCCGGCTCTCACAGAGGGCACTaGGGAAAGAGCCCCGCCCTCAAGGCGGGAGCGACA | + |
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Preference number: 6 (lower is better) Translates to: PRRERPGSHRGH*GKSPALKAGAT Trigger: TGTCGCTCCCGCCTTGAGGGCGGGGCTCTTTCCCAAGTGCCCTCTGTGAGAGCCGGGCCGCTCTCTCCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372797.7 ENST00000372802.5 |
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| CDS GCA 72 bp | GTCAGCCATAATGGACCACCTTTCCATTCCTTGGCCTaGAGCAGCAGCAGAAGCCTCCAGGTCTATGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VSHNGPPFHSLA*SSSRSLQVYVL Trigger: GAGGACATAGACCTGGAGGCTTCTGCTGCTGCTGCAGGCCAAGGAATGGAAAGGTGGTCCATTATGGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417287.5 |
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| CDS CCA 72 bp | GATGCGCAAGACACTGGATACTCGGGTGGGTTGGGATaGGTCCTGAAAAGAACTTGCTTGAAGAGCCAACCC | + |
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Preference number: 6 (lower is better) Translates to: DAQDTGYSGGLG*VLKRTCLKSQP Trigger: GGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTATCCAGTGTCTTGCGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS CAA 90 bp | AGACACTGGATACTCGGGTGGGTTGGGATGGGTCCTGAAAAGAACTaGCTTGAAGAGCCAACCCTTCTTCTGCCACGTCCAAAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RHWILGWVGMGPEKN*LEEPTLLLPRPKQL Trigger: GAGCTGCTTTGGACGTGGCAGAAGAAGGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTATCCAGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS GCA 72 bp | TACTCGGGTGGGTTGGGATGGGTCCTGAAAAGAACTTaGTTGAAGAGCCAACCCTTCTTCTGCCACGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: YSGGLGWVLKRT*LKSQPFFCHVQ Trigger: TTGGACGTGGCAGAAGAAGGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS CAA 72 bp | ATACTCGGGTGGGTTGGGATGGGTCCTGAAAAGAACTaGCTTGAAGAGCCAACCCTTCTTCTGCCACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ILGWVGMGPEKN*LEEPTLLLPRP Trigger: TGGACGTGGCAGAAGAAGGGTTGGCTCTTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS CCA 72 bp | GTCAGCCATAATGGACCACCTGCTTCAATGTTAGCCTaGCTTGTCAAAGTAAGAGCAGCAGCCGAGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VSHNGPPASMLA*LVKVRAAAEEE Trigger: TTCCTCCTCGGCTGCTGCTCTTACTTTGACAAGCCAGGCTAACATTGAAGCAGGTGGTCCATTATGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414281.5 ENST00000420216.5 |
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| CDS CCA 72 bp | CATGTCAGCCATAATGGACCACCTTCAATGTTAGCCTaGCTTGTCAAAGTAAGAGCAGCAGCCGAGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HVSHNGPPSMLA*LVKVRAAAEEE Trigger: TTCCTCCTCGGCTGCTGCTCTTACTTTGACAAGCCAGGCTAACATTGAAGGTGGTCCATTATGGCTGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424977.1 ENST00000427843.5 |
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| CDS CCA 72 bp | AAAGCTCACAGATGCGCAAGACACTGGATACTCGGGTaGGTTGGGATGGGTCCTGAAAAGAACTTGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KAHRCARHWILG*VGMGPEKNLLE Trigger: TTCAAGCAAGTTCTTTTCAGGACCCATCCCAACCCACCCGAGTATCCAGTGTCTTGCGCATCTGTGAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 72 bp | AACAGTAAGTCGCAGGAAAAGGTTTCCTGTTTCACGTaGCTCAGCAACTACATGAAAAGCTCACAGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: NSKSQEKVSCFT*LSNYMKSSQMR Trigger: GCGCATCTGTGAGCTTTTCATGTAGTTGCTGAGTCACGTGAAACAGGAAACCTTTTCCTGCGACTTACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 72 bp | AAAAGGTTTCCTGTTTCACGTGACTCAGCAACTACATaGAAAGCTCACAGATGCGCAAGACACTGGATACTC | + |
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Preference number: 6 (lower is better) Translates to: KRFPVSRDSATT*KAHRCARHWIL Trigger: GAGTATCCAGTGTCTTGCGCATCTGTGAGCTTTTCATGTAGTTGCTGAGTCACGTGAAACAGGAAACCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494114.1 |
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| CDS TCA 72 bp | ACAGCTACCTTGTTCCTGTCCTTCATACCAGACCTTTaGGCTGCTATCGTCATGTTAAACATCCTTAACAGA | + |
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Preference number: 6 (lower is better) Translates to: TATLFLSFIPDL*AAIVMLNILNR Trigger: TCTGTTAAGGATGTTTAACATGACGATAGCAGCTCAAAGGTCTGGTATGAAGGACAGGAACAAGGTAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461993.1 |
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