RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CANT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171302

Ensembl transcript IDs: ENST00000302345.6, ENST00000392446.10, ENST00000586916.6, ENST00000587242.5, ENST00000588075.5, ENST00000588096.1, ENST00000588611.5, ENST00000590370.5, ENST00000591625.5, ENST00000591732.1, ENST00000591773.5, ENST00000591811.1, ENST00000592033.5, ENST00000592228.1, ENST00000592887.1, ENST00000620915.4

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCGCGGCCTCCGTGGGGCCCGGGGGTCCAGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCCCTGTCCAGACCTCCAACCCAGGCA +
Preference number: 1 (lower is better)
Translates to: TAASVGPGGPVPAPL*GPGLGSLSRPPTQA
Trigger: TGCCTGGGTTGGAGGTCTGGACAGGGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCCCCACGGAGGCCGCGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR CCA 90 bp ACCACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTaGGGCCCGGGGGTCCAGTGCCCGCACCACTATGGGGCCCGGGAC +
Preference number: 1 (lower is better)
Translates to: TTRWQHGKQFRPRPP*GPGVQCPHHYGARD
Trigger: GTCCCGGGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR TCA 90 bp ACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTaGAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAG +
Preference number: 1 (lower is better)
Translates to: TLEYTPAKPRPSQRS*SFHREEPAKLPLEE
Trigger: CTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
3UTR GCA 90 bp GACTTGCTTCACCAGCCGCCACCGCTTCCTTACAATCTCCCGCACTaGTGGAGCGGGCTGGGTAACTACAGGACTGTGCTCTGTGTGATA +
Preference number: 1 (lower is better)
Translates to: DLLHQPPPLPYNLPH*WSGLGNYRTVLCVI
Trigger: TATCACACAGAGCACAGTCCTGTAGTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTGGTGAAGCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR GCA 90 bp GAGGGCACTGTGAATGATGGAAACGTCCCTTCTCAGCCTGGGTCGTaGCTAACCTGGGTCTCAAATCCCACTCTGCCTTCACCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: EGTVNDGNVPSQPGS*LTWVSNPTLPSPWS
Trigger: ACTCCAGGGTGAAGGCAGAGTGGGATTTGAGACCCAGGTTAGGCACGACCCAGGCTGAGAAGGGACGTTTCCATCATTCACAGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR TCA 90 bp GAAACGACCCAGCCAGTTAGGCAGGCCTTGAGTCAATGCCTGAAGTaGCCGAAATCACCACCAGATGGCAGCATGGAAAGCAGTTCAGAC +
Preference number: 1 (lower is better)
Translates to: ETTQPVRQALSQCLK*PKSPPDGSMESSSD
Trigger: GTCTGAACTGCTTTCCATGCTGCCATCTGGTGGTGATTTCGGTCACTTCAGGCATTGACTCAAGGCCTGCCTAACTGGCTGGGTCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR TCA 90 bp GGTCCACCTCATGCTCACTGCGTTCTCAGGGTGAGGCATAGGGCCTaGCATATGGTAGGAGCTCTAGGGATATTCACTGAACAAAAGAAC +
Preference number: 1 (lower is better)
Translates to: GPPHAHCVLRVRHRA*HMVGALGIFTEQKN
Trigger: GTTCTTTTGTTCAGTGAATATCCCTAGAGCTCCTACCATATGTCAGGCCCTATGCCTCACCCTGAGAACGCAGTGAGCATGAGGTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGVPAPL*GPGLGS
Trigger: GGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCAC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNVPAPL*GPGLGS
Trigger: GGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCAC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGGCCCGGGGGTCCAGTaGCCGCACCACTATGGGGCC +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGGPGVQ*PHHYGA
Trigger: GGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCC...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACTGACGATCGCGGGGTaGGGTAGGAGTGAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPLTIAG*GRSEGG
Trigger: CCCACCCTCACTCCTACCCCACCCCGCGATCGTCAG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGATAAAAGCTGAGTCCTaGTGGCCTTGCTCAGTGTTT +
Preference number: 2 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGIKAES*WPCSVF
Trigger: AAACACTGAGCAAGGCCATCAGGACTCAGCTTTTAT...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGGCCCGGGGGTCCAGTaGCCGCACCACTATGGGGCC +
Preference number: 2 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLGPGVQ*PHHYGA
Trigger: GGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACCGACATGTGAGACTTaGTTCACCAGCCGCCACCGC +
Preference number: 2 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPPTCET*FTSRHR
Trigger: GCGGTGGCGGCTGGTGAAGCAAGTCTCACATGTCGG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGATGTGCCTGCGCCCTaGCCTGTGCAGCTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: STTYDIAGERDNHERGVPDVPAP*PVQLWA
Trigger: TGCCCACAGCTGCACAGGCCAGGGCGCAGGCACATC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCTGACGATCGCGGGGTaGGGTAGGAGTGAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: STTYDIAGERDNHERGVPLTIAG*GRSEGG
Trigger: CCCACCCTCACTCCTACCCCACCCCGCGATCGTCAG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGTGTTTTTATAAAAGCTaGGTCCTGATGGCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGCFYKS*VLMALL
Trigger: GAGCAAGGCCATCAGGACTCAGCTTTTATAAAAACA...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGAAATCACCACCAGATaGCAGCATGGAAAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNEITTR*QHGKQF
Trigger: GAACTGCTTTCCATGCTGCCATCTGGTGGTGATTTC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACATAAAAGCTGAGTCCTaGTGGCCTTGCTCAGTGTTT +
Preference number: 2 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNIKAES*WPCSVF
Trigger: AAACACTGAGCAAGGCCATCAGGACTCAGCTTTTAT...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGTGGGGAGGGCACTGTaGATGATGGAAACGTCCCTT +
Preference number: 2 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPVGRAL*MMETSL
Trigger: AAGGGACGTTTCCATCATTCACAGTGCCCTCCCCAC...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAATGCCCGGTGACAGCTaGGCTCTTCAGAAATGCGTC +
Preference number: 2 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPMPGDS*ALQKCV
Trigger: GACGCATTTCTGAAGAGCTCAGCTGTCACCGGGCAT...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
3UTR-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTACCAACAGATGTGCCTaGGCCCTGGCCTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: STTYDIAGERDNHERGVPTNRCA*ALACAA
Trigger: AGCTGCACAGGCCAGGGCGCAGGCACATCTGTTGGT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCCGACATGTGAGACTTaGTTCACCAGCCGCCACCGC +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGPTCET*FTSRHR
Trigger: GCGGTGGCGGCTGGTGAAGCAAGTCTCACATGTCGG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: PALTRDHAIPCNINIFFSVPAPL*GPGLGS
Trigger: GGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCAC...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCTGCAGGGGTGGACATaGTGCTCCAGGCACAGAGTA +
Preference number: 2 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPLQGWT*CSRHRV
Trigger: TACTCTGTGCCTGGAGCATCATGTCCACCCCTGCAG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCTGCAGGGGTGGACATaGTGCTCCAGGCACAGAGTA +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGLQGWT*CSRHRV
Trigger: TACTCTGTGCCTGGAGCATCATGTCCACCCCTGCAG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCCTCGCAGCTGTGCTTaGGTTTCAAAGGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGPRSCA*VSKGER
Trigger: CCTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGTACAATCTCCCGCACTaGTGGAGCGGGCTGGGTAAC +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGYNLPH*WSGLGN
Trigger: GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTA...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCCCAGCCAACGCTCGTaGAGTTTCCACAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGPSQRS*SFHREE
Trigger: CTCTTCTCTGTGGAAACTTCACGAGCGTTGGCTGGG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTGGGGAGGGCACTGTaGATGATGGAAACGTCCCTT +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGVGRAL*MMETSL
Trigger: AAGGGACGTTTCCATCATTCACAGTGCCCTCCCCAC...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCCACCTCATGCTCACTaGGTTCTCAGGGTGAGGCAT +
Preference number: 2 (lower is better)
Translates to: STTYDIAGERDNHERGVPPPHAH*VLRVRH
Trigger: ATGCCTCACCCTGAGAACGCAGTGAGCATGAGGTGG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCCACCTCATGCTCACTaGGTTCTCAGGGTGAGGCAT +
Preference number: 2 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPPPHAH*VLRVRH
Trigger: ATGCCTCACCCTGAGAACGCAGTGAGCATGAGGTGG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAAGTCAATGCCTGAAGTaGCCGAAATCACCACCAGAT +
Preference number: 2 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPSQCLK*PKSPPD
Trigger: ATCTGGTGGTGATTTCGGTCACTTCAGGCATTGACT...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAAAGAACGCCGACATGTaGGACTTGCTTCACCAGCCG +
Preference number: 2 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTKNADM*DLLHQP
Trigger: CGGCTGGTGAAGCAAGTCTCACATGTCGGCGTTCTT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGTCTCAGCCTGGGTCGTaGCTAACCTGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGSQPGS*LTWVSN
Trigger: ATTTGAGACCCAGGTTAGGCACGACCCAGGCTGAGA...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACACCAGATGGCAGCATaGAAAGCAGTTCAGACCGCG +
Preference number: 2 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTHQMAA*KAVQTA
Trigger: CGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAGAAAAGGGGGTGACCTaGGGTTCCCAGCAAACAGGT +
Preference number: 2 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTEKGVT*GSQQTG
Trigger: ACCTGTTTGCTGGGAACCCCAGGTCACCCCCTTTTC...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGACCATGCAATACCCTaGAACATAAACATTTTCTTT +
Preference number: 2 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNDHAIP*NINIFF
Trigger: AAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAAGAAACGAGGTCGGATaGAAGAAACGACCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTRNEVG*KKRPSQ
Trigger: CTGGCTGGGTCGTTTCTTCCATCCGACCTCGTTTCT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACATATGATGCGGAGATaGTTTTATCTGAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPHMMRR*FYLRPE
Trigger: CTCAGGCCTCAGATAAAACCATCTCCGCATCATATG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATTCCTCCACTACCTATaGCATAGCGGGGGAAAGAGA +
Preference number: 2 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTFLHYL*HSGGKR
Trigger: TCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTTATGGGGCCCGGGACTaGGCTCCCTGTCCAGACCTC +
Preference number: 2 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETYGARD*APCPDL
Trigger: GAGGTCTGGACAGGGAGCCCAGTCCCGGGCCCCATA...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGAAATCACCACCAGATaGCAGCATGGAAAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: STTYDIAGERDNHERGVPEITTR*QHGKQF
Trigger: GAACTGCTTTCCATGCTGCCATCTGGTGGTGATTTC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGAAAAGGGGGTGACCTaGGGTTCCCAGCAAACAGGT +
Preference number: 2 (lower is better)
Translates to: KVSFKVIANHCLCEEAASEKGVT*GSQQTG
Trigger: ACCTGTTTGCTGGGAACCCCAGGTCACCCCCTTTTC...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCATATGATGCGGAGATaGTTTTATCTGAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ASSTTYDIAGERDNHERGHMMRR*FYLRPE
Trigger: CTCAGGCCTCAGATAAAACCATCTCCGCATCATATG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR CCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGCTTCCTCCACTACCTaGGTCTCAAATCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: KVSFKVIANHCLCEEAASASSTT*VSNPTL
Trigger: CAGAGTGGGATTTGAGACCCAGGTAGTGGAGGAAGC...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
3UTR-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTAATCTCCCGCACTGCTaGAGCGGGCTGGGTAACTAC +
Preference number: 2 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETNLPHC*SGLGNY
Trigger: GTAGTTACCCAGCCCGCTCCAGCAGTGCGGGAGATT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCATAAAAGCTGAGTCCTaGTGGCCTTGCTCAGTGTTT +
Preference number: 2 (lower is better)
Translates to: KVSFKVIANHCLCEEAASIKAES*WPCSVF
Trigger: AAACACTGAGCAAGGCCATCAGGACTCAGCTTTTAT...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCTGTTTTTATAAAAGCTaGGTCCTGATGGCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: PALTRDHAIPCNINIFFSCFYKS*VLMALL
Trigger: GAGCAAGGCCATCAGGACTCAGCTTTTATAAAAACA...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR-3UTR TCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGGAGATGGTTTTATCTaGGGCCTGAGAACCAACAGA +
Preference number: 2 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETGDGFI*GLRTNR
Trigger: TCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR CCA 72 bp TCCGTGGGGCCCGGGGGTCCAGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCCCTGTCCAGACCTCCA +
Preference number: 3 (lower is better)
Translates to: SVGPGGPVPAPL*GPGLGSLSRPP
Trigger: TGGAGGTCTGGACAGGGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCCCCACGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR CCA 72 bp TGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTaGGGCCCGGGGGTCCAGTGCCCGCACCACTATGGG +
Preference number: 3 (lower is better)
Translates to: WQHGKQFRPRPP*GPGVQCPHHYG
Trigger: CCCATAGTGGTGCGGGCACTGGACCCCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR TCA 72 bp CGGGGTGAGGTAGTGCTGTGGGGAGGGCACTGTGAATaGTGGAAACGTCCCTTCTCAGCCTGGGTCGTGCCT +
Preference number: 3 (lower is better)
Translates to: RGEVVLWGGHCE*WKRPFSAWVVP
Trigger: AGGCACGACCCAGGCTGAGAAGGGACGTTTCCATCATTCACAGTGCCCTCCCCACAGCACTACCTCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR CCA 72 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTaGAGCGGGCTGGGTAACTACAGGACTGTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: QPPPLPYNLPHC*SGLGNYRTVLC
Trigger: ACAGAGCACAGTCCTGTAGTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR TCA 72 bp TACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTaGAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCA +
Preference number: 3 (lower is better)
Translates to: YTPAKPRPSQRS*SFHREEPAKLP
Trigger: TGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
3UTR GCA 72 bp AGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTaGCTGCGCCCTGGCCTGTGCAGCTGTGGGCAGATG +
Preference number: 3 (lower is better)
Translates to: RWFYLRPENQQM*LRPGLCSCGQM
Trigger: CATCTGCCCACAGCTGCACAGGCCAGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
3UTR TCA 72 bp CAGCCAGTTAGGCAGGCCTTGAGTCAATGCCTGAAGTaGCCGAAATCACCACCAGATGGCAGCATGGAAAGC +
Preference number: 3 (lower is better)
Translates to: QPVRQALSQCLK*PKSPPDGSMES
Trigger: GCTTTCCATGCTGCCATCTGGTGGTGATTTCGGTCACTTCAGGCATTGACTCAAGGCCTGCCTAACTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGAAGGACGAGAAGCCGTaGGTGGGGACCACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGKDEKP*VGTTAP
Trigger: CGGGGCGGTGGTCCCCACTCACGGCTTCTCGTCCTT...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACCTGTGGTCCCTCCGCTaGGGGGCTGGCTCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNLWSLR*GAGSGA
Trigger: GGCACCGGAGCCAGCCCCGCAGCGGAGGGACCACAG...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR GCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGGGCCCGGGGGTCCAGTaGCCGCACCACTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVGPGVQ*PHHYGA
Trigger: GGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCC...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGGGGTCCCTCCTCGCTaGCCTCCTCGCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGGVPPR*PPRSCA
Trigger: AGCACAGCTGCGAGGAGGGCAGCGAGGAGGGACCCC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGGGGGTCCGCGGCCTTaGTCATGGACGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGGGPRP*SWTPAQ
Trigger: CTGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
69% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGCAGTTGGCGGGCGCCTaGCCGAGCCTCCAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGQLAGA*PSLQLC
Trigger: ACACAACTGGAGGCTCGGCCAGGCGCCCGCCAACTG...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGTATGGGGCCCGGGACTaGGCTCCCTGTCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGYGARD*APCPDL
Trigger: GAGGTCTGGACAGGGAGCCCAGTCCCGGGCCCCATA...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGCCTATGCGAAGAGGCTaGTTCCGGGCACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGPMRRG*FRAPGL
Trigger: CAGCCCAGGTGCCCGGAAGCAGCCTCTTCGCATAGG...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGGGGGGTCCGCGGCCTTaGTCATGGACGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVGGPRP*SWTPAQ
Trigger: CTGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCC...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGTGTAGCGCTCCTGGCTaGCGCGGCGCGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVCSAPG*RGAAGR
Trigger: TCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACA...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGACCACCGCCCCGACGTaGCTCACAGCGATGTCGCCG +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVTTAPT*LTAMSP
Trigger: CGGCGACATCGCTGTGAGCCACGTCGGGGCGGTGGT...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAAAGGACGAGAAGCCGTaGGTGGGGACCACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQKDEKP*VGTTAP
Trigger: CGGGGCGGTGGTCCCCACTCACGGCTTCTCGTCCTT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGAGCCTTTCTCCACGGTaGCGTCGCCGTCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGSLSPR*RRRRTE
Trigger: TTCTGTCCGACGGCGACGGCACCGTGGAGAAAGGCT...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGCCGACATGTGAGACTTaGTTCACCAGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGPTCET*FTSRHR
Trigger: GCGGTGGCGGCTGGTGAAGCAAGTCTCACATGTCGG...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGCGATCGGCGGGGCTTaGCTGGGCTTGGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREAIGGA*LGLAGL
Trigger: AAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAACCACCGCCCCGACGTaGCTCACAGCGATGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQTTAPT*LTAMSP
Trigger: CGGCGACATCGCTGTGAGCCACGTCGGGGCGGTGGT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPVPAPL*GPGLGS
Trigger: GGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCAC...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGTGTAGGAGGCGACTCTaGCGCTGTCCTCCTCGGATT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGCRRRL*RCPPRI
Trigger: AATCCGAGGAGGACAGCGGCAGAGTCGCCTCCTACA...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCCCGGGGGTCCAGTaGCCGCACCACTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPGPGVQ*PHHYGA
Trigger: GGCCCCATAGTGGTGCGGGCACTGGACCCCCGGGCC...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAGGGGTCCCTCCTCGCTaGCCTCCTCGCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPGVPPR*PPRSCA
Trigger: AGCACAGCTGCGAGGAGGGCAGCGAGGAGGGACCCC...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATTGGCTGGGCTTGGCTaGGCTAACGGCCGGGACGGA +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANARELAGLG*ANGRDG
Trigger: TCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACAGTTGGCGGGCGCCTaGCCGAGCCTCCAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQQLAGA*PSLQLC
Trigger: ACACAACTGGAGGCTCGGCCAGGCGCCCGCCAACTG...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCAGCAGCAGGTTaGCGCCCTTGCGCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQRSAAG*RPCARR
Trigger: ACGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCG...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACTGACGATCGCGGGGTaGGGTAGGAGTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQLTIAG*GRSEGG
Trigger: CCCACCCTCACTCCTACCCCACCCCGCGATCGTCAG...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGATGCCCGGTGACAGCTaGGCTCTTCAGAAATGCGTC +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGMPGDS*ALQKCV
Trigger: GACGCATTTCTGAAGAGCTCAGCTGTCACCGGGCAT...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACTTCCATGCAGGCTGGTaGTCTGTGGTCCCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNFHAGW*SVVPPL
Trigger: CAGCGGAGGGACCACAGAGCACCAGCCTGCATGGAA...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR GCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCCGACATGTGAGACTTaGTTCACCAGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVPTCET*FTSRHR
Trigger: GCGGTGGCGGCTGGTGAAGCAAGTCTCACATGTCGG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACCTATGCGAAGAGGCTaGTTCCGGGCACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREPMRRG*FRAPGL
Trigger: CAGCCCAGGTGCCCGGAAGCAGCCTCTTCGCATAGG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATGTCATTGTACCAGTTaGCGGGCGCCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANARECHCTS*RAPGRA
Trigger: GGCTCGGCCAGGCGCCCGCCAACTGGTACAATGACA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACGCTCAGCAGCAGGTTaGCGCCCTTGCGCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPRSAAG*RPCARR
Trigger: ACGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAACGAGAAGCCGTGAGTaGGGACCACCGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPTRSRE*GPPPRR
Trigger: ACGTCGGGGCGGTGGTCCCCACTCACGGCTTCTCGT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGAAAAGGGGGTGACCTaGGGTTCCCAGCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGEKGVT*GSQQTG
Trigger: ACCTGTTTGCTGGGAACCCCAGGTCACCCCCTTTTC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACTGCTTCCGGGCACCTaGGCTGTGACTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQLLPGT*AVTQVL
Trigger: CAGCACCTGAGTCACAGCCCAGGTGCCCGGAAGCAG...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGACGTGGGAAGCTGAGTaGGGAAGGAAGTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGTWEAE*GRKFHA
Trigger: TGCATGGAACTTCCTTCCTCACTCAGCTTCCCACGT...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR TCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAAGGCAGACTCATGGATaGGGTAGCCTGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQRQTHG*GSLAAG
Trigger: TCCAGCCGCCAGGCTACCTCATCCATGAGTCTGCCT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACCTGCAGGGGTGGACATaGTGCTCCAGGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNLQGWT*CSRHRV
Trigger: TACTCTGTGCCTGGAGCATCATGTCCACCCCTGCAG...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGGCCTGCCCTCACTCGTaGCCATGCAATACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVACPHS*PCNTLQ
Trigger: TTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGGC...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCTGTGGTCCCTCCGCTaGGGGGCTGGCTCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPLWSLR*GAGSGA
Trigger: GGCACCGGAGCCAGCCCCGCAGCGGAGGGACCACAG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR GCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATTCCATGCAGGCTGGTaGTCTGTGGTCCCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREFHAGW*SVVPPL
Trigger: CAGCGGAGGGACCACAGAGCACCAGCCTGCATGGAA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR GCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCCCAGGGCACGGCTTTaGTGCCTTCGATCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVPRARL*CLRSGR
Trigger: TCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAAGCCTTTCTCCACGGTaGCGTCGCCGTCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQSLSPR*RRRRTE
Trigger: TTCTGTCCGACGGCGACGGCACCGTGGAGAAAGGCT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTAGCCTGGCGGCTGGATaGCGGCAGCAGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPSLAAG*RQQPAG
Trigger: CCCTGCGGGCTGCTGCCGGCATCCAGCCGCCAGGCT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACTGTAGGAGGCGACTCTaGCGCTGTCCTCCTCGGATT +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNCRRRL*RCPPRI
Trigger: AATCCGAGGAGGACAGCGGCAGAGTCGCCTCCTACA...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACTACAATCTCCCGCACTaGTGGAGCGGGCTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNYNLPH*WSGLGN
Trigger: GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTA...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCGGGACGGAGGAAGGTaGCCGACTTCCGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPRDGGR*PTSAPR
Trigger: GCGCGGGGCGGAAGTCGGCCACCTTCCTCCGTCCCG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302345.6
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAATGGATGAGGTAGCCTaGCGGCTGGATGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPMDEVA*RLDAGS
Trigger: GCTGCCGGCATCCAGCCGCCAGGCTACCTCATCCAT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGAAGTCAGAACAGACTTaGGGCTTCCAGGCTATGCCC +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGKSEQT*GFQAMP
Trigger: GGGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTT...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACTGCTTCCGGGCACCTaGGCTGTGACTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPLLPGT*AVTQVL
Trigger: CAGCACCTGAGTCACAGCCCAGGTGCCCGGAAGCAG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGTGGGGAGGGCACTGTaGATGATGGAAACGTCCCTT +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNVGRAL*MMETSL
Trigger: AAGGGACGTTTCCATCATTCACAGTGCCCTCCCCAC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGATGCCCGGTGACAGCTaGGCTCTTCAGAAATGCGTC +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVMPGDS*ALQKCV
Trigger: GACGCATTTCTGAAGAGCTCAGCTGTCACCGGGCAT...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAGGGTGCTCAGACAGCTaGACGGGCATCAGCGTGACA +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPGCSDS*TGISVT
Trigger: TGTCACGCTGATGCCCGTGCAGCTGTCTGAGCACCC...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACAGGGCACGGCTTTGCTaGCTTCGATCTGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNRARLC*LRSGRR
Trigger: TCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCT...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACCCAGGGCACGGCTTTaGTGCCTTCGATCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREPRARL*CLRSGR
Trigger: TCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAAGCCTGGCGGCTGGATaGCGGCAGCAGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTSLAAG*RQQPAG
Trigger: CCCTGCGGGCTGCTGCCGGCATCCAGCCGCCAGGCT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAATACAATCTCCCGCACTaGTGGAGCGGGCTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQYNLPH*WSGLGN
Trigger: GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTA...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACCGACATGTGAGACTTaGTTCACCAGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPPTCET*FTSRHR
Trigger: GCGGTGGCGGCTGGTGAAGCAAGTCTCACATGTCGG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACCCCTCCTCGCAGCTGTaGTTGAGTTTCAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNPSSQL*LSFKGG
Trigger: TCCCCCTTTGAAACTCAAGCACAGCTGCGAGGAGGG...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAATGGCTCCTAGAACAGTaGCTGGCCTGGAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQWLLEQ*LAWSRQ
Trigger: CTGTCTGCTCCAGGCCAGGCACTGTTCTAGGAGCCA...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAATACCTTTCTCCACGGTaGCGTCGCCGTCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQYLSPR*RRRRTE
Trigger: TTCTGTCCGACGGCGACGGCACCGTGGAGAAAGGTA...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPVPAPL*GPGLGS
Trigger: GGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCAC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGTGCCCGCACCACTATaGGGCCCGGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPVPAPL*GPGLGS
Trigger: GGAGCCCAGTCCCGGGCCCCATAGTGGTGCGGGCAC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCACCAGATGGCAGCATaGAAAGCAGTTCAGACCGCG +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVHQMAA*KAVQTA
Trigger: CGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAAATCTCCCGCACTGCTaGAGCGGGCTGGGTAACTAC +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQNLPHC*SGLGNY
Trigger: GTAGTTACCCAGCCCGCTCCAGCAGTGCGGGAGATT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACGTCCCTTCTCAGCCTaGGTCGTGCCTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPRPFSA*VVPNLG
Trigger: ACCCAGGTTAGGCACGACCCAGGCTGAGAAGGGACG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACTTGTCCCCACTGTCTaGCAGGGTCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPLVPTV*QGQVAL
Trigger: AAGGGCTACCTGACCCTGTCAGACAGTGGGGACAAG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTAAGGACGAGAAGCCGTaGGTGGGGACCACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPKDEKP*VGTTAP
Trigger: CGGGGCGGTGGTCCCCACTCACGGCTTCTCGTCCTT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGCCACAGAATTTTCTTaGAGGGAGAAAGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGATEFS*REKAVT
Trigger: AGTGACCGCTTTCTCCCTTCAAGAAAATTCTGTGGC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACCCAGCCAACGCTCGTaGAGTTTCCACAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREPSQRS*SFHREE
Trigger: CTCTTCTCTGTGGAAACTTCACGAGCGTTGGCTGGG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACCAGGCTATGCCCGGTaGCAGCTGAGCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPPGYAR*QLSSSE
Trigger: TTCTGAAGAGCTCAGCTGTCACCGGGCATAGCCTGG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGGACATCAAGGACAATaGTCTAGGAGGCGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNGHQGQ*SRRRVK
Trigger: CTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAACGCTCGTCCTTCACTaGCAGCCATTCGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQTLVLH*QPFGLE
Trigger: TTCAAGGCCGAATGGCTGGCAGTGAAGGACGAGCGT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAAGGAAGAACCAGCGCTaGAGCGTGTCACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPRKNQR*SVSLQQ
Trigger: CTGCTGGAGTGACACGCTGCAGCGCTGGTTCTTCCT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACCACCTCATGCTCACTaGGTTCTCAGGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREPPHAH*VLRVRH
Trigger: ATGCCTCACCCTGAGAACGCAGTGAGCATGAGGTGG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGTCTCAGCCTGGGTCGTaGCTAACCTGGGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVSQPGS*LTWVSN
Trigger: ATTTGAGACCCAGGTTAGGCACGACCCAGGCTGAGA...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGCAAATCACTGCCTATaGGAAGAGGCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQANHCL*EEAASG
Trigger: CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGTAATCGCAAATCACTaGCTATGCGAAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGVIANH*LCEEAA
Trigger: AGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTAC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGCGATCGGCGGGGCTTaGCTGGGCTTGGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPAIGGA*LGLAGL
Trigger: AAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGGGGGTCCGCGGCCTTaGTCATGGACGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPGGPRP*SWTPAQ
Trigger: CTGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGCAGGGCGTTGTAGTTaGACACCCAGTTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQAGRCS*TPSSRG
Trigger: ACCACGAGAACTGGGTGTCCAACTACAACGCCCTGC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTTGTAGCGCTCCTGGCTaGCGCGGCGCGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPCSAPG*RGAAGR
Trigger: TCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACA...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACACCAGATGGCAGCATaGAAAGCAGTTCAGACCGCG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQHQMAA*KAVQTA
Trigger: CGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAACTGCTGGAGCGGGCTaGGTAACTACAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPTAGAG*VTTGLC
Trigger: GCACAGTCCTGTAGTTACCCAGCCCGCTCCAGCAGT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAAATCTCCCGCACTGCTaGAGCGGGCTGGGTAACTAC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPNLPHC*SGLGNY
Trigger: GTAGTTACCCAGCCCGCTCCAGCAGTGCGGGAGATT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAACTCTGCCTTCACCCTaGAGTACACTCCAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANARETLPSP*STLQRS
Trigger: GCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGT...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAACTCTGCCTTCACCCTaGAGTACACTCCAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQTLPSP*STLQRS
Trigger: GCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGGAGGGCACTGTGAATaGTGGAAACGTCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREGGHCE*WKRPFS
Trigger: TGAGAAGGGACGTTTCCATCATTCACAGTGCCCTCC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACTTCCTCCACTACCTATaGCATAGCGGGGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNFLHYL*HSGGKR
Trigger: TCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAA...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACCTGATCCGGAGGGAGTaGATAGACTCATTCCATTCC +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNLIRRE*IDSFHS
Trigger: GGAATGGAATGAGTCTATGCACTCCCTCCGGATCAG...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCTGATCCGGAGGGAGTaGATAGACTCATTCCATTCC +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVLIRRE*IDSFHS
Trigger: GGAATGGAATGAGTCTATGCACTCCCTCCGGATCAG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAAGGGCACGGCTTTGCTaGCTTCGATCTGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPRARLC*LRSGRR
Trigger: TCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAACGCTCGTCCTTCACTaGCAGCCATTCGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPTLVLH*QPFGLE
Trigger: TTCAAGGCCGAATGGCTGGCAGTGAAGGACGAGCGT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAAGCCTGGCGGCTGGATaGCGGCAGCAGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLSLAAG*RQQPAG
Trigger: CCCTGCGGGCTGCTGCCGGCATCCAGCCGCCAGGCT...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGCAGGTTGGCGCCCTTaGGCTCGTCGTCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGAGWRP*ARRPSR
Trigger: GCGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGC...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGTTGGCTGGGCTTGGCTaGGCTAACGGCCGGGACGGA +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGLAGLG*ANGRDG
Trigger: TCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAA...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCAGTTGGCGGGCGCCTaGCCGAGCCTCCAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPQLAGA*PSLQLC
Trigger: ACACAACTGGAGGCTCGGCCAGGCGCCCGCCAACTG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATGTAGCGCTCCTGGCTaGCGCGGCGCGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTCSAPG*RGAAGR
Trigger: TCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTTATGGGGCCCGGGACTaGGCTCCCTGTCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPYGARD*APCPDL
Trigger: GAGGTCTGGACAGGGAGCCCAGTCCCGGGCCCCATA...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAAGAAACGAGGTCGGATaGAAGAAACGACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQRNEVG*KKRPSQ
Trigger: CTGGCTGGGTCGTTTCTTCCATCCGACCTCGTTTCT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGGAGAAAGCGGTCACTaGCCATATGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREGESGH*PYDAEM
Trigger: CATCTCCGCATCATATGGCCAGTGACCGCTTTCTCC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGGAGAAAGCGGTCACTaGCCATATGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQGESGH*PYDAEM
Trigger: CATCTCCGCATCATATGGCCAGTGACCGCTTTCTCC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGAAAGAGACAACCATaGGAGAGGGGTCCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPGKRQP*ERGPSS
Trigger: CGAGGAGGGACCCCTCTCTCATGGTTGTCTCTTTCC...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAGGACATCAAGGACAATaGTCTAGGAGGCGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPGHQGQ*SRRRVK
Trigger: CTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCC...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACAGGTCTGCGATAACTaGGATTCGATACCGAATCCC +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQQVCDN*DSIPNP
Trigger: GGGATTCGGTATCGAATCGCAGTTATCGCAGACCTG...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTTGGTCGTCCACTCCTTaGCCAGGCCGCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPWSSTP*PGRPRT
Trigger: TGTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCA...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGTCGGCGGGGCTTGGCTaGGCTTGGCTGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGSAGLG*AWLGLA
Trigger: AGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGA...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGGGGGTCCGCGGCCTTaGTCATGGACGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGGGPRP*SWTPAQ
Trigger: CTGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCC...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAAAGTCAGAACAGACTTaGGGCTTCCAGGCTATGCCC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPKSEQT*GFQAMP
Trigger: GGGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGTTAAATGACCCAGCCTaGACATCAAGGACAATGATC +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGLNDPA*TSRTMI
Trigger: GATCATTGTCCTTGATGTCCAGGCTGGGTCATTTAA...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCTGCTTCCGGGCACCTaGGCTGTGACTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPLLPGT*AVTQVL
Trigger: CAGCACCTGAGTCACAGCCCAGGTGCCCGGAAGCAG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGGAGATGGTTTTATCTaGGGCCTGAGAACCAACAGA +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQGDGFI*GLRTNR
Trigger: TCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGCCACAGAATTTTCTTaGAGGGAGAAAGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREATEFS*REKAVT
Trigger: AGTGACCGCTTTCTCCCTTCAAGAAAATTCTGTGGC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAAAGAACGCCGACATGTaGGACTTGCTTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPKNADM*DLLHQP
Trigger: CGGCTGGTGAAGCAAGTCTCACATGTCGGCGTTCTT...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAACTCAGGTGCTGACATaGATACATCAGCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQTQVLT*IHQQGL
Trigger: GAGACCTTGCTGATGTATTCATGTCAGCACCTGAGT...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACTGATCCGGAGGGAGTaGATAGACTCATTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPLIRRE*IDSFHS
Trigger: GGAATGGAATGAGTCTATGCACTCCCTCCGGATCAG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATGGTCGTCCACTCCTTaGCCAGGCCGCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTWSSTP*PGRPRT
Trigger: TGTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGAGAACCAACAGATGTaGCTGCGCCCTGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPENQQM*LRPGLC
Trigger: GCACAGGCCAGGGCGCAGGCACATCTGTTGGTTCTC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCATCTCAAATCCCACTCTaGCTTCACCCTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPSQIPL*LHPGVH
Trigger: GTGTACTCCAGGGTGAAGGCAGAGTGGGATTTGAGA...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACCCTCCTCGCAGCTGTaGTTGAGTTTCAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPPSSQL*LSFKGG
Trigger: TCCCCCTTTGAAACTCAAGCACAGCTGCGAGGAGGG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGCAAATCACTGCCTATaGGAAGAGGCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPANHCL*EEAASG
Trigger: CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGC...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATGTCATTGTACCAGTTaGCGGGCGCCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTCHCTS*RAPGRA
Trigger: GGCTCGGCCAGGCGCCCGCCAACTGGTACAATGACA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGACGAGAAGCCGTGAGTaGGGACCACCGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGTRSRE*GPPPRR
Trigger: ACGTCGGGGCGGTGGTCCCCACTCACGGCTTCTCGT...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGAAATCACCACCAGATaGCAGCATGGAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREEITTR*QHGKQF
Trigger: GAACTGCTTTCCATGCTGCCATCTGGTGGTGATTTC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGCTGACGATCGCGGGGTaGGGTAGGAGTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGLTIAG*GRSEGG
Trigger: CCCACCCTCACTCCTACCCCACCCCGCGATCGTCAG...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAAGTCAATGCCTGAAGTaGCCGAAATCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPSQCLK*PKSPPD
Trigger: ATCTGGTGGTGATTTCGGTCACTTCAGGCATTGACT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGCCTGCCCTCACTCGTaGCCATGCAATACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPACPHS*PCNTLQ
Trigger: TTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGGC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCCTCGCAGCTGTGCTTaGGTTTCAAAGGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPPRSCA*VSKGER
Trigger: CCTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGGAAAGAGACAACCATaGGAGAGGGGTCCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPGKRQP*ERGPSS
Trigger: CGAGGAGGGACCCCTCTCTCATGGTTGTCTCTTTCC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCCAGGCTATGCCCGGTaGCAGCTGAGCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGPGYAR*QLSSSE
Trigger: TTCTGAAGAGCTCAGCTGTCACCGGGCATAGCCTGG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAACTCAGGTGCTGACATaGATACATCAGCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPTQVLT*IHQQGL
Trigger: GAGACCTTGCTGATGTATTCATGTCAGCACCTGAGT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCAGGGTGCTCAGACAGCTaGACGGGCATCAGCGTGACA +
Preference number: 4 (lower is better)
Translates to: HIQRSLPSLPPLPGSQIPGCSDS*TGISVT
Trigger: TGTCACGCTGATGCCCGTGCAGCTGTCTGAGCACCC...TGGGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTAGGAAGAACCAGCGCTaGAGCGTGTCACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPRKNQR*SVSLQQ
Trigger: CTGCTGGAGTGACACGCTGCAGCGCTGGTTCTTCCT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGCAGGTTGGCGCCCTTaGGCTCGTCGTCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLAGWRP*ARRPSR
Trigger: GCGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGTCCCTCCTCGCTaGCCTCCTCGCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASGVPPR*PPRSCA
Trigger: AGCACAGCTGCGAGGAGGGCAGCGAGGAGGGACCCC...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGCCTATGCGAAGAGGCTaGTTCCGGGCACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGPMRRG*FRAPGL
Trigger: CAGCCCAGGTGCCCGGAAGCAGCCTCTTCGCATAGG...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATTTGGCTGGGCTTGGCTaGGCTAACGGCCGGGACGGA +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNLAGLG*ANGRDG
Trigger: TCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAA...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACAGTTGGCGGGCGCCTaGCCGAGCCTCCAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLQLAGA*PSLQLC
Trigger: ACACAACTGGAGGCTCGGCCAGGCGCCCGCCAACTG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGTGTCATTGTACCAGTTaGCGGGCGCCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGCHCTS*RAPGRA
Trigger: GGCTCGGCCAGGCGCCCGCCAACTGGTACAATGACA...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTATATGGGGCCCGGGACTaGGCTCCCTGTCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLYGARD*APCPDL
Trigger: GAGGTCTGGACAGGGAGCCCAGTCCCGGGCCCCATA...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACATATGATGCGGAGATaGTTTTATCTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREHMMRR*FYLRPE
Trigger: CTCAGGCCTCAGATAAAACCATCTCCGCATCATATG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTACTGCTGGAGCGGGCTaGGTAACTACAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPTAGAG*VTTGLC
Trigger: GCACAGTCCTGTAGTTACCCAGCCCGCTCCAGCAGT...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACGTCCCTTCTCAGCCTaGGTCGTGCCTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTRPFSA*VVPNLG
Trigger: ACCCAGGTTAGGCACGACCCAGGCTGAGAAGGGACG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATCTGACGATCGCGGGGTaGGGTAGGAGTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNLTIAG*GRSEGG
Trigger: CCCACCCTCACTCCTACCCCACCCCGCGATCGTCAG...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACAGTAGAGTTTCCCATTaGAAACAATCAGGTCGGATA +
Preference number: 4 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNSRVSH*KQSGRI
Trigger: TATCCGACCTGATTGTTTTCAATGGGAAACTCTACT...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGAGGCAGACTCATGGATaGGGTAGCCTGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGRQTHG*GSLAAG
Trigger: TCCAGCCGCCAGGCTACCTCATCCATGAGTCTGCCT...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATGTTTTTATAAAAGCTaGGTCCTGATGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANARECFYKS*VLMALL
Trigger: GAGCAAGGCCATCAGGACTCAGCTTTTATAAAAACA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACTGCAGGGGTGGACATaGTGCTCCAGGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTLQGWT*CSRHRV
Trigger: TACTCTGTGCCTGGAGCATCATGTCCACCCCTGCAG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTAAGAACGCCGACATGTaGGACTTGCTTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPKNADM*DLLHQP
Trigger: CGGCTGGTGAAGCAAGTCTCACATGTCGGCGTTCTT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGTGGGGAGGGCACTGTaGATGATGGAAACGTCCCTT +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPVGRAL*MMETSL
Trigger: AAGGGACGTTTCCATCATTCACAGTGCCCTCCCCAC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACCTCGCAGCTGTGCTTaGGTTTCAAAGGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTPRSCA*VSKGER
Trigger: CCTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAGGAAAGAGACAACCATaGGAGAGGGGTCCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTGKRQP*ERGPSS
Trigger: CGAGGAGGGACCCCTCTCTCATGGTTGTCTCTTTCC...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCATTCCTCCACTACCTATaGCATAGCGGGGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPFLHYL*HSGGKR
Trigger: TCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAA...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCAGGCTATGCCCGGTaGCAGCTGAGCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ASHSAFTSFASSTTWVSNPGYAR*QLSSSE
Trigger: TTCTGAAGAGCTCAGCTGTCACCGGGCATAGCCTGG...ATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACTTAGTTCCGGAAGCTaGAGGCGCTGGAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTLSSGS*RRWRLT
Trigger: AGTCAGCCTCCAGCGCCTGCAGCTTCCGGAACTAAG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000620915.4
CDS-3UTR GCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGGGTGCTCAGACAGCTaGACGGGCATCAGCGTGACA +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGGCSDS*TGISVT
Trigger: TGTCACGCTGATGCCCGTGCAGCTGTCTGAGCACCC...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACCCAGGGCACGGCTTTaGTGCCTTCGATCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTPRARL*CLRSGR
Trigger: TCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTACGCTCGTCCTTCACTaGCAGCCATTCGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPTLVLH*QPFGLE
Trigger: TTCAAGGCCGAATGGCTGGCAGTGAAGGACGAGCGT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGCAGGTTGGCGCCCTTaGGCTCGTCGTCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASAGWRP*ARRPSR
Trigger: GCGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGC...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGACCATGCAATACCCTaGAACATAAACATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGDHAIP*NINIFF
Trigger: AAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATACAATCTCCCGCACTaGTGGAGCGGGCTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTYNLPH*WSGLGN
Trigger: GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACCACAGAGAAGAGCCTaGAAAACTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPPQRRA*KTPTGR
Trigger: TCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCATCTCAAATCCCACTCTaGCTTCACCCTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPSQIPL*LHPGVH
Trigger: GTGTACTCCAGGGTGAAGGCAGAGTGGGATTTGAGA...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTATGCGAAGAGGCTaGTTCCGGGCACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLPMRRG*FRAPGL
Trigger: CAGCCCAGGTGCCCGGAAGCAGCCTCTTCGCATAGG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTATGTCATTGTACCAGTTaGCGGGCGCCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLCHCTS*RAPGRA
Trigger: GGCTCGGCCAGGCGCCCGCCAACTGGTACAATGACA...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGCAGGGCGTTGTAGTTaGACACCCAGTTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPAGRCS*TPSSRG
Trigger: ACCACGAGAACTGGGTGTCCAACTACAACGCCCTGC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCCGCTCAGCAGCAGGTTaGCGCCCTTGCGCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSRSAAG*RPCARR
Trigger: ACGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCG...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCACGAGAAGCCGTGAGTaGGGACCACCGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASTRSRE*GPPPRR
Trigger: ACGTCGGGGCGGTGGTCCCCACTCACGGCTTCTCGT...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGAAAAGGGGGTGACCTaGGGTTCCCAGCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPEKGVT*GSQQTG
Trigger: ACCTGTTTGCTGGGAACCCCAGGTCACCCCCTTTTC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGAAAAGGGGGTGACCTaGGGTTCCCAGCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGEKGVT*GSQQTG
Trigger: ACCTGTTTGCTGGGAACCCCAGGTCACCCCCTTTTC...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAACTGCTGGAGCGGGCTaGGTAACTACAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTTAGAG*VTTGLC
Trigger: GCACAGTCCTGTAGTTACCCAGCCCGCTCCAGCAGT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAAATCTCCCGCACTGCTaGAGCGGGCTGGGTAACTAC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTNLPHC*SGLGNY
Trigger: GTAGTTACCCAGCCCGCTCCAGCAGTGCGGGAGATT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATATCTTTGTATCCATTaGCCAAGAACGCCGACATGT +
Preference number: 4 (lower is better)
Translates to: PSPWSTLQRSRGPANAREYLCIH*PRTPTC
Trigger: ACATGTCGGCGTTCTTGGCCAATGGATACAAAGATA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTACTCTGCCTTCACCCTaGAGTACACTCCAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPTLPSP*STLQRS
Trigger: GCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGT...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACTGCTTCCGGGCACCTaGGCTGTGACTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLLLPGT*AVTQVL
Trigger: CAGCACCTGAGTCACAGCCCAGGTGCCCGGAAGCAG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGCTTGTCCCCACTGTCTaGCAGGGTCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGLVPTV*QGQVAL
Trigger: AAGGGCTACCTGACCCTGTCAGACAGTGGGGACAAG...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATAGGCAGACTCATGGATaGGGTAGCCTGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNRQTHG*GSLAAG
Trigger: TCCAGCCGCCAGGCTACCTCATCCATGAGTCTGCCT...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCCCAGCCAACGCTCGTaGAGTTTCCACAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: VTFSVHFLRFLHYLGLKSPSQRS*SFHREE
Trigger: CTCTTCTCTGTGGAAACTTCACGAGCGTTGGCTGGG...GGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR TCA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAGTCCCCCAACCTTCCTaGTTGCATCTCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPVPQPS*LHLYFK
Trigger: TTTAAAATAGAGATGCAATCAGGAAGGTTGGGGGAC...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAACACAATCATTATGCTaGCAGCAGCGAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPTQSLC*QQRTER
Trigger: CCTCTCTGTTCGCTGCTGTCAGCATAATGATTGTGT...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATGGGTGCTCAGACAGCTaGACGGGCATCAGCGTGACA +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNGCSDS*TGISVT
Trigger: TGTCACGCTGATGCCCGTGCAGCTGTCTGAGCACCC...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGCCCAGGGCACGGCTTTaGTGCCTTCGATCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LQKCVTFSVHFLRFLHYLPRARL*CLRSGR
Trigger: TCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGG...CAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR GCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATAGCCTTTCTCCACGGTaGCGTCGCCGTCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNSLSPR*RRRRTE
Trigger: TTCTGTCCGACGGCGACGGCACCGTGGAGAAAGGCT...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCTGGTCGTCCACTCCTTaGCCAGGCCGCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASWSSTP*PGRPRT
Trigger: TGTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCA...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACCACCTCATGCTCACTaGGTTCTCAGGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTPPHAH*VLRVRH
Trigger: ATGCCTCACCCTGAGAACGCAGTGAGCATGAGGTGG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGAGAACCAACAGATGTaGCTGCGCCCTGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLENQQM*LRPGLC
Trigger: GCACAGGCCAGGGCGCAGGCACATCTGTTGGTTCTC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCGACATGTGAGACTTaGTTCACCAGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLPTCET*FTSRHR
Trigger: GCGGTGGCGGCTGGTGAAGCAAGTCTCACATGTCGG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCCCAACCTTCCTGATTaGATCTCTATTTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVPNLPD*ISILND
Trigger: GTCATTTAAAATAGAGATGCAATCAGGAAGGTTGGG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAGACTCCAGGACCCCATaGTCTTTGTCCCATTCCACG +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTDSRTP*SLSHST
Trigger: CGTGGAATGGGACAAAGACCATGGGGTCCTGGAGTC...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATCACGCTTCCGATCTTaGTCTCCGGCAACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTSRFRS*SPATGS
Trigger: GCTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTAGAAACGAGGTCGGATaGAAGAAACGACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPRNEVG*KKRPSQ
Trigger: CTGGCTGGGTCGTTTCTTCCATCCGACCTCGTTTCT...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGGAGAAAGCGGTCACTaGCCATATGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPGESGH*PYDAEM
Trigger: CATCTCCGCATCATATGGCCAGTGACCGCTTTCTCC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAACTCTGCCTTCACCCTaGAGTACACTCCAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTTLPSP*STLQRS
Trigger: GCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAACGTGGGAAGCTGAGTaGGGAAGGAAGTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTTWEAE*GRKFHA
Trigger: TGCATGGAACTTCCTTCCTCACTCAGCTTCCCACGT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR TCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACTGCAGGGGTGGACATaGTGCTCCAGGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLLQGWT*CSRHRV
Trigger: TACTCTGTGCCTGGAGCATCATGTCCACCCCTGCAG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGAAGAACGCCGACATGTaGGACTTGCTTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGKNADM*DLLHQP
Trigger: CGGCTGGTGAAGCAAGTCTCACATGTCGGCGTTCTT...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGAAGAACGCCGACATGTaGGACTTGCTTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: LQKCVTFSVHFLRFLHYLKNADM*DLLHQP
Trigger: CGGCTGGTGAAGCAAGTCTCACATGTCGGCGTTCTT...CAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR TCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATCCAGGCTATGCCCGGTaGCAGCTGAGCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNPGYAR*QLSSSE
Trigger: TTCTGAAGAGCTCAGCTGTCACCGGGCATAGCCTGG...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCACCAACAGATGTGCCTaGGCCCTGGCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSTNRCA*ALACAA
Trigger: AGCTGCACAGGCCAGGGCGCAGGCACATCTGTTGGT...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTTCTCAAATCCCACTCTaGCTTCACCCTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPSQIPL*LHPGVH
Trigger: GTGTACTCCAGGGTGAAGGCAGAGTGGGATTTGAGA...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACATCTCAGCCTGGGTCGTaGCTAACCTGGGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTSQPGS*LTWVSN
Trigger: ATTTGAGACCCAGGTTAGGCACGACCCAGGCTGAGA...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGCGATCGGCGGGGCTTaGCTGGGCTTGGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETAIGGA*LGLAGL
Trigger: AAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGGAAGCTGCAGGCGCTaGAGGCTGACTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGGSCRR*RLTFPE
Trigger: TTCTGGAAAAGTCAGCCTCCAGCGCCTGCAGCTTCC...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000620915.4
CDS-3UTR CCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGACTCCAGGACCCCATaGTCTTTGTCCCATTCCACG +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGDSRTP*SLSHST
Trigger: CGTGGAATGGGACAAAGACCATGGGGTCCTGGAGTC...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCCGTCCCTTCTCAGCCTaGGTCGTGCCTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSRPFSA*VVPNLG
Trigger: ACCCAGGTTAGGCACGACCCAGGCTGAGAAGGGACG...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCAAAGTCAGAACAGACTTaGGGCTTCCAGGCTATGCCC +
Preference number: 4 (lower is better)
Translates to: HIQRSLPSLPPLPGSQIPKSEQT*GFQAMP
Trigger: GGGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTT...TGGGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGAGTCAATGCCTGAAGTaGCCGAAATCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGSQCLK*PKSPPD
Trigger: ATCTGGTGGTGATTTCGGTCACTTCAGGCATTGACT...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCGCCTGCCCTCACTCGTaGCCATGCAATACCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSACPHS*PCNTLQ
Trigger: TTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGGC...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGGAGATGGTTTTATCTaGGGCCTGAGAACCAACAGA +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGGDGFI*GLRTNR
Trigger: TCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCC...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATCCCAGCCAACGCTCGTaGAGTTTCCACAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNPSQRS*SFHREE
Trigger: CTCTTCTCTGTGGAAACTTCACGAGCGTTGGCTGGG...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGGACATCAAGGACAATaGTCTAGGAGGCGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGGHQGQ*SRRRVK
Trigger: CTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCC...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACATCTCTATTTTAAATaGCCCAGCCTGGACATCAAG +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPHLYFK*PSLDIK
Trigger: CTTGATGTCCAGGCTGGGTCATTTAAAATAGAGATG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGACTCAGGTGCTGACATaGATACATCAGCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGTQVLT*IHQQGL
Trigger: GAGACCTTGCTGATGTATTCATGTCAGCACCTGAGT...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACAGGTCTGCGATAACTaGGATTCGATACCGAATCCC +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTQVCDN*DSIPNP
Trigger: GGGATTCGGTATCGAATCGCAGTTATCGCAGACCTG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp GTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCAGGTCTGCGATAACTaGGATTCGATACCGAATCCC +
Preference number: 4 (lower is better)
Translates to: VTFSVHFLRFLHYLGLKSQVCDN*DSIPNP
Trigger: GGGATTCGGTATCGAATCGCAGTTATCGCAGACCTG...GGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAAGGGCACGGCTTTGCTaGCTTCGATCTGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLRARLC*LRSGRR
Trigger: TCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCT...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCTGTAGGAGGCGACTCTaGCGCTGTCCTCCTCGGATT +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSCRRRL*RCPPRI
Trigger: AATCCGAGGAGGACAGCGGCAGAGTCGCCTCCTACA...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCACCTCATGCTCACTaGGTTCTCAGGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLPPHAH*VLRVRH
Trigger: ATGCCTCACCCTGAGAACGCAGTGAGCATGAGGTGG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGACCATGCAATACCCTaGAACATAAACATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQDHAIP*NINIFF
Trigger: AAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACCACAGAGAAGAGCCTaGAAAACTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTPQRRA*KTPTGR
Trigger: TCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCATCTCAAATCCCACTCTaGCTTCACCCTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: HIQRSLPSLPPLPGSQIPSQIPL*LHPGVH
Trigger: GTGTACTCCAGGGTGAAGGCAGAGTGGGATTTGAGA...TGGGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR GCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATGCAAATCACTGCCTATaGGAAGAGGCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNANHCL*EEAASG
Trigger: CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGC...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGTAATCGCAAATCACTaGCTATGCGAAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPVIANH*LCEEAA
Trigger: AGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTAC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTTGGAGCAGACAGATGTaGAGTAAAGGAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPWSRQM*SKGVST
Trigger: AGTGGAGACTCCTTTACTGCACATCTGTCTGCTCCA...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620915.4
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTATCACGCTTCCGATCTTaGTCTCCGGCAACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLSRFRS*SPATGS
Trigger: GCTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGA...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGATGTGCCTGCGCCCTaGCCTGTGCAGCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETDVPAP*PVQLWA
Trigger: TGCCCACAGCTGCACAGGCCAGGGCGCAGGCACATC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCATGCCCGGTGACAGCTaGGCTCTTCAGAAATGCGTC +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSMPGDS*ALQKCV
Trigger: GACGCATTTCTGAAGAGCTCAGCTGTCACCGGGCAT...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACAACACAATCATTATGCTaGCAGCAGCGAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTTQSLC*QQRTER
Trigger: CCTCTCTGTTCGCTGCTGTCAGCATAATGATTGTGT...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCCCCTCCTCGCAGCTGTaGTTGAGTTTCAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSPSSQL*LSFKGG
Trigger: TCCCCCTTTGAAACTCAAGCACAGCTGCGAGGAGGG...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGCAAATCACTGCCTATaGGAAGAGGCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASANHCL*EEAASG
Trigger: CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGC...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCAGTAATCGCAAATCACTaGCTATGCGAAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HIQRSLPSLPPLPGSQIPVIANH*LCEEAA
Trigger: AGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTAC...TGGGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR CCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCGGAAGCTGCAGGCGCTaGAGGCTGACTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSGSCRR*RLTFPE
Trigger: TTCTGGAAAAGTCAGCCTCCAGCGCCTGCAGCTTCC...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGCAGGGCGTTGTAGTTaGACACCCAGTTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASAGRCS*TPSSRG
Trigger: ACCACGAGAACTGGGTGTCCAACTACAACGCCCTGC...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTATGGATGAGGTAGCCTaGCGGCTGGATGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETMDEVA*RLDAGS
Trigger: GCTGCCGGCATCCAGCCGCCAGGCTACCTCATCCAT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCTCACGCTTCCGATCTTaGTCTCCGGCAACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSSRFRS*SPATGS
Trigger: GCTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGA...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCCACCAGATGGCAGCATaGAAAGCAGTTCAGACCGCG +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASHQMAA*KAVQTA
Trigger: CGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCATATGATGCGGAGATaGTTTTATCTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPHMMRR*FYLRPE
Trigger: CTCAGGCCTCAGATAAAACCATCTCCGCATCATATG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCATATGATGCGGAGATaGTTTTATCTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPHMMRR*FYLRPE
Trigger: CTCAGGCCTCAGATAAAACCATCTCCGCATCATATG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGCTTCCTCCACTACCTaGGTCTCAAATCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLASSTT*VSNPTL
Trigger: CAGAGTGGGATTTGAGACCCAGGTAGTGGAGGAAGC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCATCTCTATTTTAAATaGCCCAGCCTGGACATCAAG +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGHLYFK*PSLDIK
Trigger: CTTGATGTCCAGGCTGGGTCATTTAAAATAGAGATG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCCCAACCTTCCTaGTTGCATCTCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGVPQPS*LHLYFK
Trigger: TTTAAAATAGAGATGCAATCAGGAAGGTTGGGGGAC...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGTCCCCCAACCTTCCTaGTTGCATCTCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPVPQPS*LHLYFK
Trigger: TTTAAAATAGAGATGCAATCAGGAAGGTTGGGGGAC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACTGATCCGGAGGGAGTaGATAGACTCATTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLLIRRE*IDSFHS
Trigger: GGAATGGAATGAGTCTATGCACTCCCTCCGGATCAG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACAGGTCTGCGATAACTaGGATTCGATACCGAATCCC +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLQVCDN*DSIPNP
Trigger: GGGATTCGGTATCGAATCGCAGTTATCGCAGACCTG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTACCAACAGATGTGCCTaGGCCCTGGCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETTNRCA*ALACAA
Trigger: AGCTGCACAGGCCAGGGCGCAGGCACATCTGTTGGT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCACAGAGAAGAGCCTaGAAAACTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLPQRRA*KTPTGR
Trigger: TCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCTCTCAGCCTGGGTCGTaGCTAACCTGGGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASSQPGS*LTWVSN
Trigger: ATTTGAGACCCAGGTTAGGCACGACCCAGGCTGAGA...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACCCAACCTTCCTGATTaGATCTCTATTTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPPNLPD*ISILND
Trigger: GTCATTTAAAATAGAGATGCAATCAGGAAGGTTGGG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCAGAAACGAGGTCGGATaGAAGAAACGACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASRNEVG*KKRPSQ
Trigger: CTGGCTGGGTCGTTTCTTCCATCCGACCTCGTTTCT...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTTATCTTTGTATCCATTaGCCAAGAACGCCGACATGT +
Preference number: 4 (lower is better)
Translates to: STTYDIAGERDNHERGVPYLCIH*PRTPTC
Trigger: ACATGTCGGCGTTCTTGGCCAATGGATACAAAGATA...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGTTAAATGACCCAGCCTaGACATCAAGGACAATGATC +
Preference number: 4 (lower is better)
Translates to: ASSTTYDIAGERDNHERGLNDPA*TSRTMI
Trigger: GATCATTGTCCTTGATGTCCAGGCTGGGTCATTTAA...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGATAAAAGCTGAGTCCTaGTGGCCTTGCTCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VSFKVIANHCLCEEAASGIKAES*WPCSVF
Trigger: AAACACTGAGCAAGGCCATCAGGACTCAGCTTTTAT...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAAGTCAATGCCTGAAGTaGCCGAAATCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLSQCLK*PKSPPD
Trigger: ATCTGGTGGTGATTTCGGTCACTTCAGGCATTGACT...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATGGAGATGGTTTTATCTaGGGCCTGAGAACCAACAGA +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNGDGFI*GLRTNR
Trigger: TCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCC...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGCCACAGAATTTTCTTaGAGGGAGAAAGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLATEFS*REKAVT
Trigger: AGTGACCGCTTTCTCCCTTCAAGAAAATTCTGTGGC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTCCTCGCAGCTGTGCTTaGGTTTCAAAGGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETPRSCA*VSKGER
Trigger: CCTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGG...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCTTCCTCCACTACCTATaGCATAGCGGGGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSFLHYL*HSGGKR
Trigger: TCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAA...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAGGCAAAGTCAGAACACATCTCTATTTTAAATaGCCCAGCCTGGACATCAAG +
Preference number: 4 (lower is better)
Translates to: KDNDLGGGSRRQPGKVRTHLYFK*PSLDIK
Trigger: CTTGATGTCCAGGCTGGGTCATTTAAAATAGAGATG...TGTTCTGACTTTGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAACACAATCATTATGCTaGCAGCAGCGAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLTQSLC*QQRTER
Trigger: CCTCTCTGTTCGCTGCTGTCAGCATAATGATTGTGT...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTAGGAAGAACCAGCGCTaGAGCGTGTCACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETRKNQR*SVSLQQ
Trigger: CTGCTGGAGTGACACGCTGCAGCGCTGGTTCTTCCT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATGAAATCACCACCAGATaGCAGCATGGAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNEITTR*QHGKQF
Trigger: GAACTGCTTTCCATGCTGCCATCTGGTGGTGATTTC...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp GCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATTATCTTTGTATCCATTaGCCAAGAACGCCGACATGT +
Preference number: 4 (lower is better)
Translates to: ASHSAFTSFASSTTWVSNYLCIH*PRTPTC
Trigger: ACATGTCGGCGTTCTTGGCCAATGGATACAAAGATA...ATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR TCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATATAAAAGCTGAGTCCTaGTGGCCTTGCTCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNIKAES*WPCSVF
Trigger: AAACACTGAGCAAGGCCATCAGGACTCAGCTTTTAT...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCACACAATCATTATGCTaGCAGCAGCGAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASTQSLC*QQRTER
Trigger: CCTCTCTGTTCGCTGCTGTCAGCATAATGATTGTGT...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR GCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTAGGGCACGGCTTTGCTaGCTTCGATCTGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETRARLC*LRSGRR
Trigger: TCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCCCAACCTTCCTGATTaGATCTCTATTTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPPNLPD*ISILND
Trigger: GTCATTTAAAATAGAGATGCAATCAGGAAGGTTGGG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGACTCCAGGACCCCATaGTCTTTGTCCCATTCCACG +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETDSRTP*SLSHST
Trigger: CGTGGAATGGGACAAAGACCATGGGGTCCTGGAGTC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGTTAAATGACCCAGCCTaGACATCAAGGACAATGATC +
Preference number: 4 (lower is better)
Translates to: LQKCVTFSVHFLRFLHYLLNDPA*TSRTMI
Trigger: GATCATTGTCCTTGATGTCCAGGCTGGGTCATTTAA...CAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR TCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGGAGGGCACTGTGAATaGTGGAAACGTCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETGGHCE*WKRPFS
Trigger: TGAGAAGGGACGTTTCCATCATTCACAGTGCCCTCC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACATCTCTATTTTAAATaGCCCAGCCTGGACATCAAG +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLHLYFK*PSLDIK
Trigger: CTTGATGTCCAGGCTGGGTCATTTAAAATAGAGATG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGTCCCCCAACCTTCCTaGTTGCATCTCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLVPQPS*LHLYFK
Trigger: TTTAAAATAGAGATGCAATCAGGAAGGTTGGGGGAC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTATATCTTTGTATCCATTaGCCAAGAACGCCGACATGT +
Preference number: 4 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLYLCIH*PRTPTC
Trigger: ACATGTCGGCGTTCTTGGCCAATGGATACAAAGATA...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTAAGTCAGAACAGACTTaGGGCTTCCAGGCTATGCCC +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETKSEQT*GFQAMP
Trigger: GGGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATTTAAATGACCCAGCCTaGACATCAAGGACAATGATC +
Preference number: 4 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNLNDPA*TSRTMI
Trigger: GATCATTGTCCTTGATGTCCAGGCTGGGTCATTTAA...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR TCA 90 bp AAGGTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCTGTTTTTATAAAAGCTaGGTCCTGATGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KVSFKVIANHCLCEEAASCFYKS*VLMALL
Trigger: GAGCAAGGCCATCAGGACTCAGCTTTTATAAAAACA...GGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTCCACAGAGAAGAGCCTaGAAAACTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETPQRRA*KTPTGR
Trigger: TCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGG...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCTATTTCACTACTCTGTaGCCATTCTTACTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSYFTTL*PFLLPW
Trigger: CCAAGGGAGTAAGAATGGCCACAGAGTAGTGAAATA...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302345.6
CDS-3UTR CCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGAAATCACCACCAGATaGCAGCATGGAAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETEITTR*QHGKQF
Trigger: GAACTGCTTTCCATGCTGCCATCTGGTGGTGATTTC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTATAAAAGCTGAGTCCTaGTGGCCTTGCTCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETIKAES*WPCSVF
Trigger: AAACACTGAGCAAGGCCATCAGGACTCAGCTTTTAT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CCTGCCCTCACTCGTGACCATGCAATACCCTGCAACATAAACATTTTCTTTTCCCCCAACCTTCCTGATTaGATCTCTATTTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: PALTRDHAIPCNINIFFSPNLPD*ISILND
Trigger: GTCATTTAAAATAGAGATGCAATCAGGAAGGTTGGG...GGAAAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTCACGAGTGAGGGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR TCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTTGTTTTTATAAAAGCTaGGTCCTGATGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETCFYKS*VLMALL
Trigger: GAGCAAGGCCATCAGGACTCAGCTTTTATAAAAACA...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR GCA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTGACCATGCAATACCCTaGAACATAAACATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETDHAIP*NINIFF
Trigger: AAAGAAAATGTTTATGTTGCAGGGTATTGCATGGTC...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS CCA 90 bp CGGGGCTGGCTCCGGTGCCCGCGATCGGCGGGGCTTGGCTGGGCTTaGCTGGGCTTGGCTGGGCTAACGGCCGGGACGGAGGAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: RGWLRCPRSAGLGWA*LGLAGLTAGTEEGG
Trigger: GCCACCTTCCTCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591625.5
ENST00000591732.1
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
ENST00000592228.1
CDS GCA 90 bp ATCAGCGTGACAGACAGGCGGGACCCGCTGCGGGGCTGGCTCCGGTaGCCGCGATCGGCGGGGCTTGGCTGGGCTTGGCTGGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ISVTDRRDPLRGWLR*PRSAGLGWAWLGLA
Trigger: AGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCGCAGCGGGTCCCGCCTGTCTGTCACGCTGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS GCA 90 bp CTCCACTTCCTCTGGGTTAGGCTCCCGCTGCGGGGCTGGCTCCGGTaGCCGCGATCGGCGGGGCTTGGCTGGGCTTGGCTGGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LHFLWVRLPLRGWLR*PRSAGLGWAWLGLA
Trigger: AGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCGCAGCGGGAGCCTAACCCAGAGGAAGTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591773.5
CDS GCA 90 bp GAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCCGCTaGGGGGCTGGCTCCGGTGCCCGCGATCGGCGGGGCTTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: EEGSSMQAGALWSLR*GAGSGARDRRGLAG
Trigger: CCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCGCAGCGGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591811.1
CDS GCA 90 bp TGTCGCCGAAGTCAGGGGAGGCGCTCAGCAGCAGGTTGGCGCCCTTaGGCTCGTCGTCCTTCTCGCTGTAGCGCTCCTGGCTGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: CRRSQGRRSAAGWRP*ARRPSRCSAPGWRG
Trigger: GCCGCGCCAGCCAGGAGCGCTACAGCGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCGCCTCCCCTGACTTCGGCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000620915.4
CDS CCA 90 bp TGGCGCCCTTGCGCTCGTCGTCCTTCTCGCTGTAGCGCTCCTGGCTaGCGCGGCGCGGCAGGAAGAACCAGCGCTGCAGCGTGTCACTCC +
Preference number: 5 (lower is better)
Translates to: WRPCARRPSRCSAPG*RGAAGRTSAAACHS
Trigger: GGAGTGACACGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACAGCGAGAAGGACGACGAGCGCAAGGGCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000588096.1
ENST00000591773.5
ENST00000620915.4
CDS-3UTR CAA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGTGGGCTTGGCTGGGCTaGGCTGGGCTAACGGCCGGG +
Preference number: 5 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGWAWLG*AGLTAG
Trigger: CCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCA...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302345.6
ENST00000392446.10
CDS-3UTR CAA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGCGGGGGTCCGCGGCCTaGGTCATGGACGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGRGSAA*VMDAST
Trigger: TGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCCG...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS GCA 90 bp AAGAGGGTTTGTTTCTCCAGCTTCCCGCTGCGGGGCTGGCTCCGGTaGCCGCGATCGGCGGGGCTTGGCTGGGCTTGGCTGGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KRVCFSSFPLRGWLR*PRSAGLGWAWLGLA
Trigger: AGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCGCAGCGGGAAGCTGGAGAAACAAACCCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587242.5
ENST00000588611.5
ENST00000591625.5
ENST00000592033.5
CDS CCA 90 bp GGGAAGCTGAGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCCGCTGCGGGGCTGGCTCCGGTGCCCGCGATCGGCGG +
Preference number: 5 (lower is better)
Translates to: GKLSEEGSSMQAGAL*SLRCGAGSGARDRR
Trigger: CCGCCGATCGCGGGCACCGGAGCCAGCCCCGCAGCGGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591811.1
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACGCGATCGGCGGGGCTaGGCTGGGCTTGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANARERDRRG*AGLGWA
Trigger: AGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CAA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCGGGGGTCCGCGGCCTaGGTCATGGACGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVRGSAA*VMDAST
Trigger: TGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCCG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGGTGTCATTGTACCAGTaGGCGGGCGCCTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGVSLYQ*AGAWPS
Trigger: GCTCGGCCAGGCGCCCGCCAACTGGTACAATGACAC...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGCGCTCAGCAGCAGGTaGGCGCCCTTGCGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNALSSR*APLRSS
Trigger: CGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCGC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS GCA 90 bp CCACGGTGCCGTCGCCGTCGGACAGAATCACCCAGGGCACGGCTTTaGTGCCTTCGATCTGGTAGACGACCCCCGTCCGGTCATCCACGG +
Preference number: 5 (lower is better)
Translates to: PRCRRRRTESPRARL*CLRSGRRPPSGHPR
Trigger: CCGTGGATGACCGGACGGGGGTCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGGTGATTCTGTCCGACGGCGACGGCACCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000592228.1
ENST00000620915.4
CDS CCA 90 bp TCACAGCGATGTCGCCGAAGTCAGGGGAGGCGCTCAGCAGCAGGTTaGCGCCCTTGCGCTCGTCGTCCTTCTCGCTGTAGCGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SQRCRRSQGRRSAAG*RPCARRPSRCSAPG
Trigger: GCCAGGAGCGCTACAGCGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCGCCTCCCCTGACTTCGGCGACATCGCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATGGGCTTGGCTGGGCTaGGCTGGGCTAACGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANAREWAWLG*AGLTAG
Trigger: CCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CAA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACGTGGTCGTCCACTCCTaGCCCAGGCCGCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNVVVHS*PRPPTY
Trigger: GTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCAC...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGCGCTCAGCAGCAGGTaGGCGCCCTTGCGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQALSSR*APLRSS
Trigger: CGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCGC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGCGCTCAGCAGCAGGTaGGCGCCCTTGCGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANAREALSSR*APLRSS
Trigger: CGACGAGCGCAAGGGCGCCAACCTGCTGCTGAGCGC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS GCA 90 bp CGGTGCCGTCGCCGTCGGACAGAATCACCCAGGGCACGGCTTTGCTaGCTTCGATCTGGTAGACGACCCCCGTCCGGTCATCCACGGAGT +
Preference number: 5 (lower is better)
Translates to: RCRRRRTESPRARLC*LRSGRRPPSGHPRS
Trigger: ACTCCGTGGATGACCGGACGGGGGTCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGGTGATTCTGTCCGACGGCGACGGCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAAGTGGTCGTCCACTCCTaGCCCAGGCCGCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQVVVHS*PRPPTY
Trigger: GTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCAC...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS GCA 90 bp GGTGCTCTGTGGTCCCTCTCCCGAGGCCATCCCCAGGCCTGCCGCTaGACTCTGAGCAAGGCTATAATGAAGGGAGTGGCGACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GALWSLSRGHPQACR*TLSKAIMKGVATPW
Trigger: CCAGGGAGTCGCCACTCCCTTCATTATAGCCTTGCTCAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAGGGACCACAGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591625.5
ENST00000592033.5
CDS CCA 90 bp GGGAAGCTGAGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCTCCCGAGGCCATCCCCAGGCCTGCCGCTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: GKLSEEGSSMQAGAL*SLSRGHPQACRCTL
Trigger: CAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591625.5
ENST00000592033.5
CDS CCA 90 bp CCGCCCCTAGTATCCAGCACACGGCAGGCAGCAGGCACCGTCCTGTaGGACAGAAGCCTCACACGGGCCATGGCTCCATTCTCATGCCTC +
Preference number: 5 (lower is better)
Translates to: PPLVSSTRQAAGTVL*DRSLTRAMAPFSCL
Trigger: GAGGCATGAGAATGGAGCCATGGCCCGTGTGAGGCTTCTGTCCCACAGGACGGTGCCTGCTGCCTGCCGTGTGCTGGATACTAGGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTGTCATTGTACCAGTaGGCGGGCGCCTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANAREVSLYQ*AGAWPS
Trigger: GCTCGGCCAGGCGCCCGCCAACTGGTACAATGACAC...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACCCAGCCGGTGTCCTTaGTGGGGGAGACAGGGGGTA +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANAREPSRCP*WGRQGV
Trigger: TACCCCCTGTCTCCCCCACAAAGGACACCGGCTGGG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS GCA 90 bp CAGGCTGGTGCTCTGTGGTCCCTCTCCCGAGGCCATCCCCAGGCCTaGCGCTGCACTCTGAGCAAGGCTATAATGAAGGGAGTGGCGACT +
Preference number: 5 (lower is better)
Translates to: QAGALWSLSRGHPQA*RCTLSKAIMKGVAT
Trigger: AGTCGCCACTCCCTTCATTATAGCCTTGCTCAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAGGGACCACAGAGCACCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591625.5
ENST00000592033.5
CDS-3UTR CAA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAGTGTCATTGTACCAGTaGGCGGGCGCCTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPVSLYQ*AGAWPS
Trigger: GCTCGGCCAGGCGCCCGCCAACTGGTACAATGACAC...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCATTCCACGGCCACCTaGTCCCCACTGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVHSTAT*SPLSDR
Trigger: CCTGTCAGACAGTGGGGACAAGGTGGCCGTGGAATG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAGGACCCCATGGTCTTaGTCCCATTCCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVRTPWS*SHSTAT
Trigger: GGTGGCCGTGGAATGGGACAAAGACCATGGGGTCCT...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCAAGCAGGTTGGCGCCCTaGCGCTCGTCGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPSRLAP*RSSSFS
Trigger: CGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGCT...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS GCA 90 bp TGTTTCTCCAGCTTCCTGAGTCCTGGCCGTGAAGATGCCTGGGGCTaGCCCGACAGGAAACCCTTGCCACGTCCAGAGGGGAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: CFSSFLSPGREDAWG*PDRKPLPRPEGRGL
Trigger: CAACCCTCTCCCCTCTGGACGTGGCAAGGGTTTCCTGTCGGGGCAGCCCCAGGCATCTTCACGGCCAGGACTCAGGAAGCTGGAGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591732.1
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAAGGACCCCATGGTCTTaGTCCCATTCCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANARERTPWS*SHSTAT
Trigger: GGTGGCCGTGGAATGGGACAAAGACCATGGGGTCCT...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS GCA 90 bp CTGGGAGATGTGCTTTTCTCCCGAGGCCATCCCCAGGCCTGCCGCTaGACTCTGAGCAAGGCTATAATGAAGGGAGTGGCGACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: LGDVLFSRGHPQACR*TLSKAIMKGVATPW
Trigger: CCAGGGAGTCGCCACTCCCTTCATTATAGCCTTGCTCAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAAAAGCACATCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587242.5
ENST00000588611.5
ENST00000591732.1
CDS GCA 90 bp TACAATCTCCCGCACTGCTCAGGGTCCAGTTACCTTTCTCCACGGTaGCGTCGCCGTCGGACAGAATCACCCAGGGCACGGCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: YNLPHCSGSSYLSPR*RRRRTESPRARLCC
Trigger: GCAGCAAAGCCGTGCCCTGGGTGATTCTGTCCGACGGCGACGGCACCGTGGAGAAAGGTAACTGGACCCTGAGCAGTGCGGGAGATTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS CCA 90 bp AGGGTTTGTTTCTCCAGCTTCCTGAGTCCTGGCCGTGAAGATGCCTaGGGCTGCCCCGACAGGAAACCCTTGCCACGTCCAGAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RVCFSSFLSPGREDA*GCPDRKPLPRPEGR
Trigger: TCTCCCCTCTGGACGTGGCAAGGGTTTCCTGTCGGGGCAGCCCCAGGCATCTTCACGGCCAGGACTCAGGAAGCTGGAGAAACAAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591732.1
CDS-3UTR CAA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCGGGGGTCCGCGGCCTaGGTCATGGACGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: STTYDIAGERDNHERGVPRGSAA*VMDAST
Trigger: TGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCCG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCGGGGGTCCGCGGCCTaGGTCATGGACGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: ASSTTYDIAGERDNHERGRGSAA*VMDAST
Trigger: TGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCCG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACCCAGCCGGTGTCCTTaGTGGGGGAGACAGGGGGTA +
Preference number: 5 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPPSRCP*WGRQGV
Trigger: TACCCCCTGTCTCCCCCACAAAGGACACCGGCTGGG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAAGCAGGTTGGCGCCCTaGCGCTCGTCGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPSRLAP*RSSSFS
Trigger: CGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGCT...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS CCA 90 bp CCTACTTGCTCCTCGTCTCCCCTTGGGAAGGGTAGTGGTGACGGGTaGCCACCGTGTCCACAGTGGTCTGGTTCAAGCTCTCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: PTCSSSPLGKGSGDG*PPCPQWSGSSSLRI
Trigger: GATCCTGAGAGAGCTTGAACCAGACCACTGTGGACACGGTGGCCACCCGTCACCACTACCCTTCCCAAGGGGAGACGAGGAGCAAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS-3UTR CAA 90 bp CACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCCATGGGCTTGGCTGGGCTaGGCTGGGCTAACGGCCGGG +
Preference number: 5 (lower is better)
Translates to: HIQRSLPSLPPLPGSQIPWAWLG*AGLTAG
Trigger: CCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCA...TGGGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR CAA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCATGGCCGAGCCTCCAGTaGTGTGCATTGTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPWPSLQ*CALWVG
Trigger: CCCCACCCACAATGCACACAACTGGAGGCTCGGCCA...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAACTGTCCTCCTCGGATTaGAGGGCCACAATGATCTGG +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANARELSSSD*RATMIW
Trigger: CCAGATCATTGTGGCCCTCAAATCCGAGGAGGACAG...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAATTCACGCTTCCGATCTaGGTCTCCGGCAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQFTLPI*VSGNRK
Trigger: CTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGAA...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATCCTCGCAGCTGTGCTaGAGTTTCAAAGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANARESSQLC*SFKGGE
Trigger: CTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGGA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CAGCCGCCACCGCTTCCTTACAATCTCCCGCACTGCTGGAGCGGGCTGGGTAACAAAGTCAGAACAGACTaGGGGCTTCCAGGCTATGCC +
Preference number: 5 (lower is better)
Translates to: QPPPLPYNLPHCWSGLGNKVRTD*GLPGYA
Trigger: GGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTTT...GTTACCCAGCCCGCTCCAGCAGTGCGGGAGATTGTAAGGAAGCGGTGGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS CCA 90 bp CCCCTTGGGAAGGGTAGTGGTGACGGGTGGCCACCGTGTCCACAGTaGTCTGGTTCAAGCTCTCTCAGGATCCTGGGAGATGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PLGKGSGDGWPPCPQ*SGSSSLRILGDVLF
Trigger: GAAAAGCACATCTCCCAGGATCCTGAGAGAGCTTGAACCAGACCACTGTGGACACGGTGGCCACCCGTCACCACTACCCTTCCCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS CCA 90 bp GGGAAGCTGAGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCTGCAAATTCCACGGCAAATCTCCTCGGGGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: GKLSEEGSSMQAGAL*SLCKFHGKSPRGWA
Trigger: TGCCCACCCCCGAGGAGATTTGCCGTGGAATTTGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS-3UTR CAA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACGCGATCGGCGGGGCTaGGCTGGGCTTGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLRDRRG*AGLGWA
Trigger: AGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
CDS-3UTR CAA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCCCAGCCGGTGTCCTTaGTGGGGGAGACAGGGGGTA +
Preference number: 5 (lower is better)
Translates to: ASSTTYDIAGERDNHERGPSRCP*WGRQGV
Trigger: TACCCCCTGTCTCCCCCACAAAGGACACCGGCTGGG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCACATTCCACGGCCACCTaGTCCCCACTGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPHSTAT*SPLSDR
Trigger: CCTGTCAGACAGTGGGGACAAGGTGGCCGTGGAATG...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCAAGGACCCCATGGTCTTaGTCCCATTCCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPRTPWS*SHSTAT
Trigger: GGTGGCCGTGGAATGGGACAAAGACCATGGGGTCCT...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTAGCAGGTTGGCGCCCTaGCGCTCGTCGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPSRLAP*RSSSFS
Trigger: CGAGAAGGACGACGAGCGCAAGGGCGCCAACCTGCT...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCACTGTCCTCCTCGGATTaGAGGGCCACAATGATCTGG +
Preference number: 5 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPLSSSD*RATMIW
Trigger: CCAGATCATTGTGGCCCTCAAATCCGAGGAGGACAG...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CACCAGATGGCAGCATGGAAAGCAGTTCAGACCGCGGCCTCCGTGGGGCCCGGGTTATCTTTGTATCCATaGGCCAAGAACGCCGACATG +
Preference number: 5 (lower is better)
Translates to: HQMAAWKAVQTAASVGPGLSLYP*AKNADM
Trigger: CATGTCGGCGTTCTTGGCCAATGGATACAAAGATAA...CCCGGGCCCCACGGAGGCCGCGGTCTGAACTGCTTTCCATGCTGCCATCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAGTTTCCATCCTCGCAGCTGTGCTaGAGTTTCAAAGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGVHSSEAEAQPTLVKFPSSQLC*SFKGGE
Trigger: CTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGGA...TGGAAACTTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAAAAAGTCAGAACAGACTaGGGGCTTCCAGGCTATGCC +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANAREKVRTD*GLPGYA
Trigger: GGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTTT...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS TCA 90 bp ATTACTCCATCTCCCCTGTCCCAGCTGGCAACGTGGGAAGCTGAGTaGGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: ITPSPLSQLATWEAE*GRKFHAGWCSVVPL
Trigger: CAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCCACGTTGCCAGCTGGGACAGGGGAGATGGAGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591773.5
ENST00000592887.1
CDS TCA 90 bp CTGCCTCCACAGACAGCACGCTCCTTAAAGGTCAAGCTCAGGATCTaGCTGACTTCTGCACCTGTCCCCGCCCCTAGTATCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: LPPQTARSLKVKLRI*LTSAPVPAPSIQHT
Trigger: CGTGTGCTGGATACTAGGGGCGGGGACAGGTGCAGAAGTCAGTCAGATCCTGAGCTTGACCTTTAAGGAGCGTGCTGTCTGTGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS GCA 90 bp CATTTCAAGACACGAGTCCTGTGCAGCTTTTCCCTCAAGCCTACTTaGTCCTCGTCTCCCCTTGGGAAGGGTAGTGGTGACGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: HFKTRVLCSFSLKPT*SSSPLGKGSGDGWP
Trigger: TGGCCACCCGTCACCACTACCCTTCCCAAGGGGAGACGAGGAGCAAGTAGGCTTGAGGGAAAAGCTGCACAGGACTCGTGTCTTGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS GCA 90 bp AGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCTaGAAATTCCACGGCAAATCTCCTCGGGGGTGGGCAGTACAAGGA +
Preference number: 5 (lower is better)
Translates to: SEEGSSMQAGALWSL*KFHGKSPRGWAVQG
Trigger: TCCTTGTACTGCCCACCCCCGAGGAGATTTGCCGTGGAATTTGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS-3UTR CAA 90 bp GTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCTGGGTCTCAAATCCTGGCCGAGCCTCCAGTaGTGTGCATTGTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VTFSVHFLRFLHYLGLKSWPSLQ*CALWVG
Trigger: CCCCACCCACAATGCACACAACTGGAGGCTCGGCCA...GGATTTGAGACCCAGGTAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS-3UTR CAA 90 bp GTGAGCTTTAAAGTAATCGCAAATCACTGCCTATGCGAAGAGGCTGCTTCCGGGGTGTCATTGTACCAGTaGGCGGGCGCCTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: VSFKVIANHCLCEEAASGVSLYQ*AGAWPS
Trigger: GCTCGGCCAGGCGCCCGCCAACTGGTACAATGACAC...CCCGGAAGCAGCCTCTTCGCATAGGCAGTGATTTGCGATTACTTTAAAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTCATTCCACGGCCACCTaGTCCCCACTGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: STTYDIAGERDNHERGVPHSTAT*SPLSDR
Trigger: CCTGTCAGACAGTGGGGACAAGGTGGCCGTGGAATG...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCATTCCACGGCCACCTaGTCCCCACTGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: ASSTTYDIAGERDNHERGHSTAT*SPLSDR
Trigger: CCTGTCAGACAGTGGGGACAAGGTGGCCGTGGAATG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTGCCAGCCATTCGGCCTaGAAGCCTTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPASHSA*KPFSTV
Trigger: CACCGTGGAGAAAGGCTTCAAGGCCGAATGGCTGGC...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp TCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGGTCCCTGCCAGCCATTCGGCCTaGAAGCCTTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: STTYDIAGERDNHERGVPASHSA*KPFSTV
Trigger: CACCGTGGAGAAAGGCTTCAAGGCCGAATGGCTGGC...AGGGACCCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATGTGGTCGTCCACTCCTaGCCCAGGCCGCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNVVVHS*PRPPTY
Trigger: GTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCAC...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CCCAGCCTGGACATCAAGGACAATGATCTAGGAGGCGGGTCAAGGAGACAGCCATCCTCGCAGCTGTGCTaGAGTTTCAAAGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PSLDIKDNDLGGGSRRQPSSQLC*SFKGGE
Trigger: CTCTCCCCCTTTGAAACTCAAGCACAGCTGCGAGGA...TGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCCAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS CCA 90 bp GCTCTGTGGTCCCTCTGCAAATTCCACGGCAAATCTCCTCGGGGGTaGGCAGTACAAGGAAACCAGAAAGGAAGAAGGTCACAGGGAGTC +
Preference number: 5 (lower is better)
Translates to: ALWSLCKFHGKSPRG*AVQGNQKGRRSQGV
Trigger: GACTCCCTGTGACCTTCTTCCTTTCTGGTTTCCTTGTACTGCCCACCCCCGAGGAGATTTGCCGTGGAATTTGCAGAGGGACCACAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS CCA 90 bp CGCTGCACTCTGAGCAAGGCTATAATGAAGGGAGTGGCGACTCCCTaGACAGCAGACAGCCAAGAGGGTTTGTTTCTCCAGCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RCTLSKAIMKGVATP*TADSQEGLFLQLPE
Trigger: CTCAGGAAGCTGGAGAAACAAACCCTCTTGGCTGTCTGCTGTCCAGGGAGTCGCCACTCCCTTCATTATAGCCTTGCTCAGAGTGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591732.1
CDS-3UTR CAA 90 bp TCCCACTCTGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAATTATCTTTGTATCCATaGGCCAAGAACGCCGACATG +
Preference number: 5 (lower is better)
Translates to: SHSAFTLEYTPAKPRPSQLSLYP*AKNADM
Trigger: CATGTCGGCGTTCTTGGCCAATGGATACAAAGATAA...TTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCAGAGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGAATTATCTTTGTATCCATaGGCCAAGAACGCCGACATG +
Preference number: 5 (lower is better)
Translates to: PSPWSTLQRSRGPANARELSLYP*AKNADM
Trigger: CATGTCGGCGTTCTTGGCCAATGGATACAAAGATAA...TTCACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS TCA 90 bp GGGCATCAGCGTGACAGACAGGCGGGACTTTCATTCGGCAAGACGTaGAGTCTTTCCACAGCAAAATTACTCCATCTCCCCTGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GHQRDRQAGLSFGKT*SLSTAKLLHLPCPS
Trigger: GCTGGGACAGGGGAGATGGAGTAATTTTGCTGTGGAAAGACTTCACGTCTTGCCGAATGAAAGTCCCGCCTGTCTGTCACGCTGATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392446.10
ENST00000586916.6
ENST00000588611.5
ENST00000590370.5
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
CDS-3UTR CAA 90 bp GCTTCCTCCACTACCTATGACATAGCGGGGGAAAGAGACAACCATGAGAGAGGGCTGTCCTCCTCGGATTaGAGGGCCACAATGATCTGG +
Preference number: 5 (lower is better)
Translates to: ASSTTYDIAGERDNHERGLSSSD*RATMIW
Trigger: CCAGATCATTGTGGCCCTCAAATCCGAGGAGGACAG...CCCTCTCTCATGGTTGTCTCTTTCCCCCGCTATGTCATAGGTAGTGGAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp TGCCTTCACCCTGGAGTACACTCCAGCGAAGCCGAGGCCCAGCCAACGCTCGTGCCCTCAGACGCTTTATaGTTTACAAAACAGATGGAT +
Preference number: 5 (lower is better)
Translates to: CLHPGVHSSEAEAQPTLVPSDAL*FTKQMD
Trigger: ATCCATCTGTTTTGTAAACAATAAAGCGTCTGAGGG...CACGAGCGTTGGCTGGGCCTCGGCTTCGCTGGAGTGTACTCCAGGGTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS CCA 90 bp TGGGCAGTACAAGGAAACCAGAAAGGAAGAAGGTCACAGGGAGTCTaGTTAGGCCATCCTGCCTCCACAGACAGCACGCTCCTTAAAGGT +
Preference number: 5 (lower is better)
Translates to: WAVQGNQKGRRSQGV*LGHPASTDSTLLKG
Trigger: ACCTTTAAGGAGCGTGCTGTCTGTGGAGGCAGGATGGCCTAACCAGACTCCCTGTGACCTTCTTCCTTTCTGGTTTCCTTGTACTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS-3UTR CAA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATAGGACCCCATGGTCTTaGTCCCATTCCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNRTPWS*SHSTAT
Trigger: GGTGGCCGTGGAATGGGACAAAGACCATGGGGTCCT...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTAGCCAGCCATTCGGCCTaGAAGCCTTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLASHSA*KPFSTV
Trigger: CACCGTGGAGAAAGGCTTCAAGGCCGAATGGCTGGC...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTAAAGTCAGAACAGACTaGGGGCTTCCAGGCTATGCC +
Preference number: 5 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPKVRTD*GLPGYA
Trigger: GGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTTT...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS GCA 90 bp GTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCTGCATTTCTGACATaGGTCTTAGACATTTCAAGACACGAGTCCTGTGCAGCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VPCRLVLCGPSAFLT*VLDISRHESCAAFP
Trigger: GGGAAAAGCTGCACAGGACTCGTGTCTTGAAATGTCTAAGACGCATGTCAGAAATGCAGAGGGACCACAGAGCACCAGCCTGCATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
CDS GCA 90 bp TGCATTTCTGACATGCGTCTTAGACATTTCAAGACACGAGTCCTGTaGAGCTTTTCCCTCAAGCCTACTTGCTCCTCGTCTCCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: CISDMRLRHFKTRVL*SFSLKPTCSSSPLG
Trigger: CCCAAGGGGAGACGAGGAGCAAGTAGGCTTGAGGGAAAAGCTGCACAGGACTCGTGTCTTGAAATGTCTAAGACGCATGTCAGAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS GCA 90 bp AGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCTaGATTTCTGACATGCGTCTTAGACATTTCAAGACACGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SEEGSSMQAGALWSL*ISDMRLRHFKTRVL
Trigger: CAGGACTCGTGTCTTGAAATGTCTAAGACGCATGTCAGAAATGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
CDS CCA 90 bp GGGAAGCTGAGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCTGCATTTCTGACATGCGTCTTAGACATTTCAAGACA +
Preference number: 5 (lower is better)
Translates to: GKLSEEGSSMQAGAL*SLCISDMRLRHFKT
Trigger: TGTCTTGAAATGTCTAAGACGCATGTCAGAAATGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
CDS-3UTR CAA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTATTCACGCTTCCGATCTaGGTCTCCGGCAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLFTLPI*VSGNRK
Trigger: CTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGAA...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTTGGCCGAGCCTCCAGTaGTGTGCATTGTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETWPSLQ*CALWVG
Trigger: CCCCACCCACAATGCACACAACTGGAGGCTCGGCCA...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp ATGCGGAGATGGTTTTATCTGAGGCCTGAGAACCAACAGATGTGCCTGCGCCCTCCCTCAGACGCTTTATaGTTTACAAAACAGATGGAT +
Preference number: 5 (lower is better)
Translates to: MRRWFYLRPENQQMCLRPPSDAL*FTKQMD
Trigger: ATCCATCTGTTTTGTAAACAATAAAGCGTCTGAGGG...AGGGCGCAGGCACATCTGTTGGTTCTCAGGCCTCAGATAAAACCATCTCCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTTTCACGCTTCCGATCTaGGTCTCCGGCAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETFTLPI*VSGNRK
Trigger: CTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGAA...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTAAAGTCAGAACAGACTaGGGGCTTCCAGGCTATGCC +
Preference number: 5 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETKVRTD*GLPGYA
Trigger: GGCATAGCCTGGAAGCCCCAAGTCTGTTCTGACTTT...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CGTGAAGTTTCCACAGAGAAGAGCCTGCAAAACTCCCACTGGAAGAGGAGAAATACTCTAGCAGTATCTTaGCTTACTTTCATTCGGCAA +
Preference number: 5 (lower is better)
Translates to: REVSTEKSLQNSHWKRRNTLAVS*LTFIRQ
Trigger: TTGCCGAATGAAAGTAAGCAAAGATACTGCTAGAGT...ATTTCTCCTCTTCCAGTGGGAGTTTTGCAGGCTCTTCTCTGTGGAAACTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302345.6
CDS-3UTR CAA 90 bp AGCTCTTCAGAAATGCGTCACATTCAGCGTTCACTTCCTTCGCTTCCTCCACTACCCTCAGACGCTTTATaGTTTACAAAACAGATGGAT +
Preference number: 5 (lower is better)
Translates to: SSSEMRHIQRSLPSLPPLPSDAL*FTKQMD
Trigger: ATCCATCTGTTTTGTAAACAATAAAGCGTCTGAGGG...TAGTGGAGGAAGCGAAGGAAGTGAACGCTGAATGTGACGCATTTCTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000592228.1
ENST00000620915.4
CDS-3UTR CAA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTCCCTCAGACGCTTTATaGTTTACAAAACAGATGGAT +
Preference number: 5 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETPSDAL*FTKQMD
Trigger: ATCCATCTGTTTTGTAAACAATAAAGCGTCTGAGGG...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000620915.4
CDS-3UTR CAA 90 bp CAACATTTTCTTTATCTTTGTATCCATTGGCCAAGAACGCCGACATGTGAGACTTATACAGTTATCGGTTaGTTTGTTTCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: QHFLYLCIHWPRTPTCETYTVIG*FVSVST
Trigger: GGTGGAGACAGAAACAAACAAACCGATAACTGTATA...AGTCTCACATGTCGGCGTTCTTGGCCAATGGATACAAAGATAAAGAAAATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620915.4
CDS GCA 72 bp CTGGGCCCGCGTTCCCGGCAGCCTCTGCTCTGCGGCTaGGCGCGGACGGCGCGAGGGCTGCTGGGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LGPRSRQPLLCG*ARTARGLLGAV
Trigger: CACAGCTCCCAGCAGCCCTCGCGCCGTCCGCGCGCAGCCGCAGAGCAGAGGCTGCCGGGAACGCGGGCCCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591811.1
CDS CCA 72 bp GGGCTTGGCTGGGCTAACGGCCGGGACGGAGGAAGGTaGCCGACTTCCGCCCCGCGCGCGCTCGCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: GLGWANGRDGGR*PTSAPRALAPP
Trigger: AGGCGGGGCGAGCGCGCGCGGGGCGGAAGTCGGCCACCTTCCTCCGTCCCGGCCGTTAGCCCAGCCAAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302345.6
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000591732.1
ENST00000591811.1
ENST00000592033.5
CDS CAA 90 bp GCGGGGCTGGCTCCGGTGCCCGCGATCGGCGGGGCTTGGCTGGGCTaGGCTGGGCTTGGCTGGGCTAACGGCCGGGACGGAGGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: AGLAPVPAIGGAWLG*AGLGWANGRDGGRW
Trigger: CCACCTTCCTCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591625.5
ENST00000591732.1
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
ENST00000592228.1
CDS GCA 72 bp AGTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCCGCTaGGGGGCTGGCTCCGGTGCCCGCGATCGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: SSMQAGALWSLR*GAGSGARDRRG
Trigger: GCCCCGCCGATCGCGGGCACCGGAGCCAGCCCCGCAGCGGAGGGACCACAGAGCACCAGCCTGCATGGAACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591811.1
CDS CAA 72 bp CCGCGATCGGCGGGGCTTGGCTGGGCTTGGCTGGGCTaGGCTGGGCTAACGGCCGGGACGGAGGAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: PRSAGLGWAWLG*AGLTAGTEEGG
Trigger: GCCACCTTCCTCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591625.5
ENST00000591732.1
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
ENST00000592228.1
CDS CAA 90 bp CTCCGGTGCCCGCGATCGGCGGGGCTTGGCTGGGCTTGGCTGGGCTaGGCTGGGCTAACGGCCGGGACGGAGGAAGGTGGCCGACTTCCG +
Preference number: 6 (lower is better)
Translates to: LRCPRSAGLGWAWLG*AGLTAGTEEGGRLP
Trigger: CGGAAGTCGGCCACCTTCCTCCGTCCCGGCCGTTAGCCCAGCCAAGCCCAGCCAAGCCCAGCCAAGCCCCGCCGATCGCGGGCACCGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000302345.6
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000591732.1
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
CDS CCA 72 bp TGCGCTCGTCGTCCTTCTCGCTGTAGCGCTCCTGGCTaGCGCGGCGCGGCAGGAAGAACCAGCGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: CARRPSRCSAPG*RGAAGRTSAAA
Trigger: CGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACAGCGAGAAGGACGACGAGCGCA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000588096.1
ENST00000591773.5
ENST00000620915.4
CDS CCA 72 bp AGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCCGCTGCGGGGCTGGCTCCGGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: SEEGSSMQAGAL*SLRCGAGSGAR
Trigger: GCGGGCACCGGAGCCAGCCCCGCAGCGGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591811.1
CDS GCA 72 bp TCCTGGCTGGCGCGGCGCGGCAGGAAGAACCAGCGCTaGAGCGTGTCACTCCAGCAGGCAGACTCATGGATG +
Preference number: 6 (lower is better)
Translates to: SWLARRGRKNQR*SVSLQQADSWM
Trigger: CATCCATGAGTCTGCCTGCTGGAGTGACACGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCAGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000588096.1
ENST00000591773.5
ENST00000620915.4
CDS GCA 72 bp CGTCGCCGTCGGACAGAATCACCCAGGGCACGGCTTTaGTGCCTTCGATCTGGTAGACGACCCCCGTCCGGT +
Preference number: 6 (lower is better)
Translates to: RRRRTESPRARL*CLRSGRRPPSG
Trigger: ACCGGACGGGGGTCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGGTGATTCTGTCCGACGGCGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000592228.1
ENST00000620915.4
CDS GCA 72 bp CCGCACTGCTCAGGGTCCAGTTACCTTTCTCCACGGTaGCGTCGCCGTCGGACAGAATCACCCAGGGCACGG +
Preference number: 6 (lower is better)
Translates to: PHCSGSSYLSPR*RRRRTESPRAR
Trigger: CCGTGCCCTGGGTGATTCTGTCCGACGGCGACGGCACCGTGGAGAAAGGTAACTGGACCCTGAGCAGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592228.1
CDS GCA 72 bp GCCCAGGCCGCCCACGTACAGACGCTCGTCCTTCACTaGCAGCCATTCGGCCTTGAAGCCTGGCCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: AQAAHVQTLVLH*QPFGLEAWPSR
Trigger: TCTGCTTGGCCAGGCTTCAAGGCCGAATGGCTGGCAGTGAAGGACGAGCGTCTGTACGTGGGCGGCCTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588096.1
CDS GCA 72 bp AGCTTCCTGAGTCCTGGCCGTGAAGATGCCTGGGGCTaGCCCGACAGGAAACCCTTGCCACGTCCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: SFLSPGREDAWG*PDRKPLPRPEG
Trigger: CCCCTCTGGACGTGGCAAGGGTTTCCTGTCGGGGCAGCCCCAGGCATCTTCACGGCCAGGACTCAGGAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591732.1
CDS CCA 72 bp AGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCTCCCGAGGCCATCCCCAGGCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SEEGSSMQAGAL*SLSRGHPQACR
Trigger: GCGGCAGGCCTGGGGATGGCCTCGGGAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591625.5
ENST00000592033.5
CDS CAA 72 bp GTGGCGACTCCCTGGACAGCAGACAGCCAAGAGGGTTaGTTTCTCCAGCTTCCCGCTGCGGGGCTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: VATPWTADSQEG*FLQLPAAGLAP
Trigger: CGGAGCCAGCCCCGCAGCGGGAAGCTGGAGAAACAAACCCTCTTGGCTGTCTGCTGTCCAGGGAGTCGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587242.5
ENST00000588611.5
ENST00000591625.5
ENST00000592033.5
CDS GCA 72 bp CGCCGTCGGACAGAATCACCCAGGGCACGGCTTTGCTaGCTTCGATCTGGTAGACGACCCCCGTCCGGTCAT +
Preference number: 6 (lower is better)
Translates to: RRRTESPRARLC*LRSGRRPPSGH
Trigger: ATGACCGGACGGGGGTCGTCTACCAGATCGAAGGCAGCAAAGCCGTGCCCTGGGTGATTCTGTCCGACGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000592228.1
ENST00000620915.4
CDS GCA 72 bp GCCCAGGCCGCCCACGTACAGACGCTCGTCCTTCACTaGCAGCCATTCGGCCTTGAAGCCTTTCTCCACGGT +
Preference number: 6 (lower is better)
Translates to: AQAAHVQTLVLH*QPFGLEAFLHG
Trigger: ACCGTGGAGAAAGGCTTCAAGGCCGAATGGCTGGCAGTGAAGGACGAGCGTCTGTACGTGGGCGGCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000620915.4
CDS GCA 72 bp TGGTCCCTCTCCCGAGGCCATCCCCAGGCCTGCCGCTaGACTCTGAGCAAGGCTATAATGAAGGGAGTGGCG +
Preference number: 6 (lower is better)
Translates to: WSLSRGHPQACR*TLSKAIMKGVA
Trigger: CGCCACTCCCTTCATTATAGCCTTGCTCAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591625.5
ENST00000592033.5
CDS CCA 72 bp GTGGGGGAGACAGGGGGTAGGTGTCATTGTACCAGTTaGCGGGCGCCTGGCCGAGCCTCCAGTTGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: VGETGGRCHCTS*RAPGRASSCVH
Trigger: ATGCACACAACTGGAGGCTCGGCCAGGCGCCCGCCAACTGGTACAATGACACCTACCCCCTGTCTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000592228.1
ENST00000620915.4
CDS CAA 90 bp TCCGGGTTCTCGTTCACCACATCACCCGTAGTGGTCGTCCACTCCTaGCCCAGGCCGCCCACGTACAGACGCTCGTCCTTCACTGCCAGC +
Preference number: 6 (lower is better)
Translates to: SGFSFTTSPVVVVHS*PRPPTYRRSSFTAS
Trigger: GCTGGCAGTGAAGGACGAGCGTCTGTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCACTACGGGTGATGTGGTGAACGAGAACCCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000588096.1
ENST00000591773.5
ENST00000620915.4
CDS GCA 72 bp GCTCTGTGGTCCCTCTCCCGAGGCCATCCCCAGGCCTaGCGCTGCACTCTGAGCAAGGCTATAATGAAGGGA +
Preference number: 6 (lower is better)
Translates to: ALWSLSRGHPQA*RCTLSKAIMKG
Trigger: TCCCTTCATTATAGCCTTGCTCAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAGGGACCACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591625.5
ENST00000592033.5
CDS CCA 72 bp TTCTCCAGCTTCCTGAGTCCTGGCCGTGAAGATGCCTaGGGCTGCCCCGACAGGAAACCCTTGCCACGTCCA +
Preference number: 6 (lower is better)
Translates to: FSSFLSPGREDA*GCPDRKPLPRP
Trigger: TGGACGTGGCAAGGGTTTCCTGTCGGGGCAGCCCCAGGCATCTTCACGGCCAGGACTCAGGAAGCTGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591732.1
CDS CAA 72 bp TCGTTCACCACATCACCCGTAGTGGTCGTCCACTCCTaGCCCAGGCCGCCCACGTACAGACGCTCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SFTTSPVVVVHS*PRPPTYRRSSF
Trigger: GAAGGACGAGCGTCTGTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCACTACGGGTGATGTGGTGAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000588096.1
ENST00000591773.5
ENST00000620915.4
CDS CCA 72 bp TCCTCGTCTCCCCTTGGGAAGGGTAGTGGTGACGGGTaGCCACCGTGTCCACAGTGGTCTGGTTCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: SSSPLGKGSGDG*PPCPQWSGSSS
Trigger: AGAGCTTGAACCAGACCACTGTGGACACGGTGGCCACCCGTCACCACTACCCTTCCCAAGGGGAGACGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS CCA 72 bp GTCCACAGTGGTCTGGTTCAAGCTCTCTCAGGATCCTaGGAGATGTGCTTTTCCGCTGCGGGGCTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: VHSGLVQALSGS*EMCFSAAGLAP
Trigger: CGGAGCCAGCCCCGCAGCGGAAAAGCACATCTCCCAGGATCCTGAGAGAGCTTGAACCAGACCACTGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586916.6
ENST00000588075.5
ENST00000590370.5
CDS CAA 72 bp GCTTTTCCCTCAAGCCTACTTGCTCCTCGTCTCCCCTaGGGAAGGGTAGTGGTGACGGGTGGCCACCGTGTC +
Preference number: 6 (lower is better)
Translates to: AFPSSLLAPRLP*GRVVVTGGHRV
Trigger: GACACGGTGGCCACCCGTCACCACTACCCTTCCCAAGGGGAGACGAGGAGCAAGTAGGCTTGAGGGAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS CAA 90 bp TCCTGTGCAGCTTTTCCCTCAAGCCTACTTGCTCCTCGTCTCCCCTaGGGAAGGGTAGTGGTGACGGGTGGCCACCGTGTCCACAGTGGT +
Preference number: 6 (lower is better)
Translates to: SCAAFPSSLLAPRLP*GRVVVTGGHRVHSG
Trigger: ACCACTGTGGACACGGTGGCCACCCGTCACCACTACCCTTCCCAAGGGGAGACGAGGAGCAAGTAGGCTTGAGGGAAAAGCTGCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS TCA 72 bp TCTCCCCTGTCCCAGCTGGCAACGTGGGAAGCTGAGTaGGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SPLSQLATWEAE*GRKFHAGWCSV
Trigger: CACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCCACGTTGCCAGCTGGGACAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000586916.6
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591625.5
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
ENST00000592887.1
CDS TCA 72 bp TCCATCTCCCCTGTCCCAGCTGGCAACGTGGGAAGCTaGGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SISPVPAGNVGS*VRKEVPCRLVL
Trigger: GAGCACCAGCCTGCATGGAACTTCCTTCCTCACTCAGCTTCCCACGTTGCCAGCTGGGACAGGGGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000586916.6
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591625.5
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
ENST00000592887.1
CDS GCA 72 bp GGAGATGTGCTTTTCTCCCGAGGCCATCCCCAGGCCTaGCGCTGCACTCTGAGCAAGGCTATAATGAAGGGA +
Preference number: 6 (lower is better)
Translates to: GDVLFSRGHPQA*RCTLSKAIMKG
Trigger: TCCCTTCATTATAGCCTTGCTCAGAGTGCAGCGGCAGGCCTGGGGATGGCCTCGGGAGAAAAGCACATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587242.5
ENST00000588611.5
ENST00000591732.1
CDS CCA 72 bp GTCCACAGTGGTCTGGTTCAAGCTCTCTCAGGATCCTaGGAGATGTGCTTTTCTCCCGAGGCCATCCCCAGG +
Preference number: 6 (lower is better)
Translates to: VHSGLVQALSGS*EMCFSPEAIPR
Trigger: CCTGGGGATGGCCTCGGGAGAAAAGCACATCTCCCAGGATCCTGAGAGAGCTTGAACCAGACCACTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587242.5
ENST00000588611.5
ENST00000591732.1
CDS CCA 72 bp AAGGGTAGTGGTGACGGGTGGCCACCGTGTCCACAGTaGTCTGGTTCAAGCTCTCTCAGGATCCTGGGAGAT +
Preference number: 6 (lower is better)
Translates to: KGSGDGWPPCPQ*SGSSSLRILGD
Trigger: ATCTCCCAGGATCCTGAGAGAGCTTGAACCAGACCACTGTGGACACGGTGGCCACCCGTCACCACTACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS GCA 72 bp ACACGAGTCCTGTGCAGCTTTTCCCTCAAGCCTACTTaGTCCTCGTCTCCCCTTGGGAAGGGTAGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: TRVLCSFSLKPT*SSSPLGKGSGD
Trigger: GTCACCACTACCCTTCCCAAGGGGAGACGAGGAGCAAGTAGGCTTGAGGGAAAAGCTGCACAGGACTCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS CAA 72 bp ATGAACTCGATGCCTTCGTATTTCACGCTTCCGATCTaGGTCTCCGGCAACAGGAAGCGCCCGTCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: MNSMPSYFTLPI*VSGNRKRPSSV
Trigger: CACGCTGGACGGGCGCTTCCTGTTGCCGGAGACCAAGATCGGAAGCGTGAAATACGAAGGCATCGAGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000591773.5
ENST00000620915.4
CDS CCA 72 bp AGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCTGCAAATTCCACGGCAAATCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: SEEGSSMQAGAL*SLCKFHGKSPR
Trigger: CCGAGGAGATTTGCCGTGGAATTTGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS CCA 72 bp TCCACAGCAAAATTACTCCATCTCCCCTGTCCCAGCTaGCAACGTGGGAAGCTGAGTGAGGAAGGAAGTTCC +
Preference number: 6 (lower is better)
Translates to: STAKLLHLPCPS*QRGKLSEEGSS
Trigger: GGAACTTCCTTCCTCACTCAGCTTCCCACGTTGCCAGCTGGGACAGGGGAGATGGAGTAATTTTGCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000302345.6
ENST00000392446.10
ENST00000586916.6
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591625.5
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
ENST00000592887.1
CDS CCA 72 bp TCCCTCTGCAAATTCCACGGCAAATCTCCTCGGGGGTaGGCAGTACAAGGAAACCAGAAAGGAAGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: SLCKFHGKSPRG*AVQGNQKGRRS
Trigger: TGACCTTCTTCCTTTCTGGTTTCCTTGTACTGCCCACCCCCGAGGAGATTTGCCGTGGAATTTGCAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592887.1
CDS TCA 72 bp CGTGACAGACAGGCGGGACTTTCATTCGGCAAGACGTaGAGTCTTTCCACAGCAAAATTACTCCATCTCCCC +
Preference number: 6 (lower is better)
Translates to: RDRQAGLSFGKT*SLSTAKLLHLP
Trigger: GGGGAGATGGAGTAATTTTGCTGTGGAAAGACTTCACGTCTTGCCGAATGAAAGTCCCGCCTGTCTGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392446.10
ENST00000586916.6
ENST00000588611.5
ENST00000590370.5
ENST00000591773.5
ENST00000591811.1
ENST00000592033.5
CDS CCA 72 bp AGTGAGGAAGGAAGTTCCATGCAGGCTGGTGCTCTGTaGTCCCTCTGCATTTCTGACATGCGTCTTAGACAT +
Preference number: 6 (lower is better)
Translates to: SEEGSSMQAGAL*SLCISDMRLRH
Trigger: ATGTCTAAGACGCATGTCAGAAATGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCCTTCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
CDS GCA 72 bp GACATGCGTCTTAGACATTTCAAGACACGAGTCCTGTaGAGCTTTTCCCTCAAGCCTACTTGCTCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: DMRLRHFKTRVL*SFSLKPTCSSS
Trigger: AGACGAGGAGCAAGTAGGCTTGAGGGAAAAGCTGCACAGGACTCGTGTCTTGAAATGTCTAAGACGCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586916.6
ENST00000587242.5
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
ENST00000591732.1
CDS GCA 72 bp GGAAGTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCTaGATTTCTGACATGCGTCTTAGACATTTCAAGACA +
Preference number: 6 (lower is better)
Translates to: GSSMQAGALWSL*ISDMRLRHFKT
Trigger: TGTCTTGAAATGTCTAAGACGCATGTCAGAAATGCAGAGGGACCACAGAGCACCAGCCTGCATGGAACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588075.5
ENST00000588611.5
ENST00000590370.5
CDS CAA 90 bp GTTCCATGCAGGCTGGTGCTCTGTGGTCCCTCTGACGTTAGAGTATaGTATACAGTTATCGGTTTGTTTGTTTCTGTCTCCACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: VPCRLVLCGPSDVRV*YTVIGLFVSVSTSV
Trigger: TACAGAGGTGGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAGGGACCACAGAGCACCAGCCTGCATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586916.6
ENST00000591773.5
CDS CAA 90 bp CTCTGTGGTCCCTCTGACGTTAGAGTATTGTATACAGTTATCGGTTaGTTTGTTTCTGTCTCCACCTCTGTATCCTGGCTCCTAGAACAG +
Preference number: 6 (lower is better)
Translates to: LCGPSDVRVLYTVIG*FVSVSTSVSWLLEQ
Trigger: CTGTTCTAGGAGCCAGGATACAGAGGTGGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAGGGACCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586916.6
ENST00000591773.5
CDS CAA 72 bp AGGCTGGTGCTCTGTGGTCCCTCTGACGTTAGAGTATaGTATACAGTTATCGGTTTGTTTGTTTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: RLVLCGPSDVRV*YTVIGLFVSVS
Trigger: GGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAGGGACCACAGAGCACCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586916.6
ENST00000591773.5
CDS CAA 90 bp CTCTGTGGCCATTCTGACGTTAGAGTATTGTATACAGTTATCGGTTaGTTTGTTTCTGTCTCCACCTCTGTATCCTGGCTCCTAGAACAG +
Preference number: 6 (lower is better)
Translates to: LCGHSDVRVLYTVIG*FVSVSTSVSWLLEQ
Trigger: CTGTTCTAGGAGCCAGGATACAGAGGTGGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAATGGCCACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620915.4
CDS CAA 72 bp ATTCCCGACTCTAGATTCCCGACTCTAGCAGTATCTTaGCTTACTTTCATTCGGCAAGACGTGAAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: IPDSRFPTLAVS*LTFIRQDVKSF
Trigger: GAAAGACTTCACGTCTTGCCGAATGAAAGTAAGCAAAGATACTGCTAGAGTCGGGAATCTAGAGTCGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302345.6
ENST00000588075.5
ENST00000591625.5
ENST00000592887.1
CDS CAA 72 bp CCCTCTGACGTTAGAGTATTGTATACAGTTATCGGTTaGTTTGTTTCTGTCTCCACCTCTGTATCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PSDVRVLYTVIG*FVSVSTSVSWL
Trigger: GAGCCAGGATACAGAGGTGGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586916.6
ENST00000591773.5
CDS CAA 72 bp CATTCTGACGTTAGAGTATTGTATACAGTTATCGGTTaGTTTGTTTCTGTCTCCACCTCTGTATCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: HSDVRVLYTVIG*FVSVSTSVSWL
Trigger: GAGCCAGGATACAGAGGTGGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620915.4
CDS CAA 90 bp AGAAACAGTATTTCACTACTCTGTGGCCATTCTGACGTTAGAGTATaGTATACAGTTATCGGTTTGTTTGTTTCTGTCTCCACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: RNSISLLCGHSDVRV*YTVIGLFVSVSTSV
Trigger: TACAGAGGTGGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAATGGCCACAGAGTAGTGAAATACTGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620915.4
CDS CAA 72 bp ATTTCACTACTCTGTGGCCATTCTGACGTTAGAGTATaGTATACAGTTATCGGTTTGTTTGTTTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: ISLLCGHSDVRV*YTVIGLFVSVS
Trigger: GGAGACAGAAACAAACAAACCGATAACTGTATACAATACTCTAACGTCAGAATGGCCACAGAGTAGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620915.4