RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAND1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111530

Ensembl transcript IDs: ENST00000535146.1, ENST00000539109.1, ENST00000539434.1, ENST00000540319.5, ENST00000540525.1, ENST00000541058.1, ENST00000544619.1, ENST00000545606.6

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACATCCTTTTACTTCTTGGTGGGGAGGCCCTCTTCATTGAACTTTaGGAGGCTCAGGTCACTACCACACATGGAAACCTAAGAGTAGGA +
Preference number: 1 (lower is better)
Translates to: HILLLLGGEALFIEL*EAQVTTTHGNLRVG
Trigger: TCCTACTCTTAGGTTTCCATGTGTGGTAGTGACCTGAGCCTCTCAAAGTTCAATGAAGAGGGCCTCCCCACCAAGAAGTAAAAGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR TCA 90 bp TGGAACTACGTTGGCAGTATTCAGTTTGACATTAAGGGCTGTTTGTaGACAGCTGGACTAGTCGGCCCTTCCCATACCCTCAGTAACCAT +
Preference number: 1 (lower is better)
Translates to: WNYVGSIQFDIKGCL*TAGLVGPSHTLSNH
Trigger: ATGGTTACTGAGGGTATGGGAAGGGCCGACTAGTCCAGCTGTTCACAAACAGCCCTTAATGTCAAACTGAATACTGCCAACGTAGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 90 bp TATGGGCAAAAGAGAGACAGTGAAGGATGTAGTGCAAAGATGAAATaGTCAGGACCATTGTTTTGCAGCTGTGTAGAGGAAGGACTGGGA +
Preference number: 1 (lower is better)
Translates to: YGQKRDSEGCSAKMK*SGPLFCSCVEEGLG
Trigger: TCCCAGTCCTTCCTCTACACAGCTGCAAAACAATGGTCCTGACCATTTCATCTTTGCACTACATCCTTCACTGTCTCTCTTTTGCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 90 bp AATATTACGTGCCTGAAAATGGAGTCAGGTTCCAAACATGGGAGTTaGCCCTTGGATTATGCCCTCTTCATTACTTGTCCAGGGAAGACT +
Preference number: 1 (lower is better)
Translates to: NITCLKMESGSKHGS*PLDYALFITCPGKT
Trigger: AGTCTTCCCTGGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTTTCAGGCACGTAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 90 bp TGGGAACGTCATAGAAATACAAATTACTGGTTTACTACAGCCTACTaGACCACAGCCTCTGGGTGTAGGGCCCAGCGATCTGTTTTAATA +
Preference number: 1 (lower is better)
Translates to: WERHRNTNYWFTTAY*TTASGCRAQRSVLI
Trigger: TATTAAAACAGATCGCTGGGCCCTACACCCAGAGGCTGTGGTTCAGTAGGCTGTAGTAAACCAGTAATTTGTATTTCTATGACGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR GCA 90 bp AGTGAAGGATGTAGTGCAAAGATGAAATGGTCAGGACCATTGTTTTaGAGCTGTGTAGAGGAAGGACTGGGAATTAATGCCTTCTGGGTA +
Preference number: 1 (lower is better)
Translates to: SEGCSAKMKWSGPLF*SCVEEGLGINAFWV
Trigger: TACCCAGAAGGCATTAATTCCCAGTCCTTCCTCTACACAGCTGCAAAACAATGGTCCTGACCATTTCATCTTTGCACTACATCCTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 90 bp AAGTCACAAACCAGACAAGGAGGGGTTACTTTTAGTCCAGACAAGTaGCTCCAAGCTGAGTCTTTAGATACAGAAACTGGAACTACGTTG +
Preference number: 1 (lower is better)
Translates to: KSQTRQGGVTFSPDK*LQAESLDTETGTTL
Trigger: CAACGTAGTTCCAGTTTCTGTATCTAAAGACTCAGCTTGGAGTCACTTGTCTGGACTAAAAGTAACCCCTCCTTGTCTGGTTTGTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 90 bp ATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTaGGGAACAGCATTAGAACCTGGGAACGTCATAGAAATACAAATT +
Preference number: 1 (lower is better)
Translates to: MPSGYFNVVVSKVWP*GTALEPGNVIEIQI
Trigger: AATTTGTATTTCTATGACGTTCCCAGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATACCCAGAAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 90 bp GAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGTGTaGCCTTGGGGAACAGCATTAGAACCTGGGAACGTCATAGAAATA +
Preference number: 1 (lower is better)
Translates to: ELMPSGYFNVVVSKV*PWGTALEPGNVIEI
Trigger: TATTTCTATGACGTTCCCAGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTACAGGCGTAAGCCACTaGGTCCAGCCCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: EITGVSCHLALKYNSLLFTGVSH*VQPSAF
Trigger: GAAGGCAGAGGGCTGGACGCAGTGGCTTACGCCTGT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCAGGCCAGAGTGCAGTaGCGTGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPQARVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACTGCACTCTGGCCTG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 90 bp ACGTGCCTGAAAATGGAGTCAGGTTCCAAACATGGGAGTTGGCCCTaGGATTATGCCCTCTTCATTACTTGTCCAGGGAAGACTTCCTGG +
Preference number: 2 (lower is better)
Translates to: TCLKMESGSKHGSWP*DYALFITCPGKTSW
Trigger: CCAGGAAGTCTTCCCTGGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTTTCAGGCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTACTCCTGTCTTCAAGTaGTCCCCCACCTTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPTPVFK*SPTLAS
Trigger: GGAGGCCAAGGTGGGGGATCACTTGAAGACAGGAGT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR GCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACGGGCACACAGCATTTTaGATCCACTGCCACTTCCTC +
Preference number: 2 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYGHTAF*IHCHFL
Trigger: GAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCC...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTCACCCAGGCTGGAGTaGAGTGGTGCATGCAATCTT +
Preference number: 2 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPSPRLE*SGACNL
Trigger: AAGATTGCATGCACCACTGCACTCCAGCCTGGGTGA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 90 bp CAATATTACGTGCCTGAAAATGGAGTCAGGTTCCAAACATGGGAGTaGGCCCTTGGATTATGCCCTCTTCATTACTTGTCCAGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: QYYVPENGVRFQTWE*ALGLCPLHYLSRED
Trigger: GTCTTCCCTGGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTTTCAGGCACGTAATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATTTACTACAGCCTACTaGACCACAGCCTCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSFTTAY*TTASGC
Trigger: ACACCCAGAGGCTGTGGTTCAGTAGGCTGTAGTAAA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGTGGTAGACTATGTCTaGACTCCACATCCTGCCACT +
Preference number: 2 (lower is better)
Translates to: EITGVSCHLALKYNSLLFVVDYV*TPHPAT
Trigger: AGTGGCAGGATGTGGAGTCCAGACATAGTCTACCAC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 90 bp AGAGACAGTGAAGGATGTAGTGCAAAGATGAAATGGTCAGGACCATaGTTTTGCAGCTGTGTAGAGGAAGGACTGGGAATTAATGCCTTC +
Preference number: 2 (lower is better)
Translates to: RDSEGCSAKMKWSGP*FCSCVEEGLGINAF
Trigger: GAAGGCATTAATTCCCAGTCCTTCCTCTACACAGCTGCAAAACAATGGTCCTGACCATTTCATCTTTGCACTACATCCTTCACTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTGAAGAGGCTACAGTGTaGAATGAGCTCACTGAAGGA +
Preference number: 2 (lower is better)
Translates to: WVACSQILPLCSTFATKIEEATV*NELTEG
Trigger: TCCTTCAGTGAGCTCATTTCACACTGTAGCCTCTTC...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGATTTCCAGTTTGAATaGCTGGGTAAATGGGATGCC +
Preference number: 2 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPDFQFE*LGKWDA
Trigger: GGCATCCCATTTACCCAGTCATTCAAACTGGAAATC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACCACTTTTGTCCTGCTTaGCCAAAAGCCCTAAATGGA +
Preference number: 2 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYHFCPA*PKALNG
Trigger: TCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTG...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTTCCATTCCAGTATCTaGACCACATCACCACTAGGA +
Preference number: 2 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPFHSSI*TTSPLG
Trigger: TCCTAGTGGTGATGTGGTCCAGATACTGGAATGGAA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATTTCAAAAACAGGTATaGATCTGGGGTAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSFQKQV*IWGSSG
Trigger: ACCACTGCTACCCCAGATTCATACCTGTTTTTGAAA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAGACCTTGAGCAAACTTaGGAAGGCAAGGGAAATATT +
Preference number: 2 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSDLEQT*EGKGNI
Trigger: AATATTTCCCTTGCCTTCTCAAGTTTGCTCAAGGTC...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR GCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAGTTGCTGAAAGATCTTaGCTGAAACTACAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSVAERS*LKLQQR
Trigger: CCTTTGCTGTAGTTTCAGGCAAGATCTTTCAGCAAC...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTAGTATGACACAGCATTaGAATTCTAAGCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: EITGVSCHLALKYNSLLFSMTQH*NSKHCC
Trigger: ACAGCAGTGCTTAGAATTTCAATGCTGTGTCATACT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCATTCACACAACATATaGATGTCAGTCTCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPHSHNI*MSVSCS
Trigger: TGAACAGGAGACTGACATGCATATGTTGTGTGAATG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACTATTCACTAAGCAAGTaGGCACACAGCATTTTGCAT +
Preference number: 2 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYYSLSK*AHSILH
Trigger: ATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATA...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR CCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGATTCAGTGCATTGTATaGTCATATGTAATGGTCCCC +
Preference number: 2 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKIQCIV*SYVMVP
Trigger: GGGGACCATTACATATGACCATACAATGCACTGAAT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTAGGGTAAATAGATACTaGACCCTATCTCCATACTCC +
Preference number: 2 (lower is better)
Translates to: WVACSQILPLCSTFATKIRVNRY*TLSPYS
Trigger: GGAGTATGGAGATAGGGTCCAGTATCTATTTACCCT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR TCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACCCTCATTCAGGTAAATaGTACAGTTACAATTCAGAC +
Preference number: 2 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYPHSGK*YSYNSD
Trigger: GTCTGAATTGTAACTGTATCATTTACCTGAATGAGG...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATCAGGAACCTACATGTaGCAAATTCCTAAGTTTAAC +
Preference number: 2 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSSGTYM*QIPKFN
Trigger: GTTAAACTTAGGAATTTGTCACATGTAGGTTCCTGA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR GCA 90 bp AGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGTAGATGAACATACACTCAAATGCTaGCTTTCTAATATCCAGACC +
Preference number: 2 (lower is better)
Translates to: SYHFCPAWPKALNGRVDEHTLKC*LSNIQT
Trigger: GGTCTGGATATTAGAAAGGCAGCATTTGAGTGTATG...TTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCATGCAAAATTAGTGTaGGCAACAGGGATATTGTTA +
Preference number: 2 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKHAKLV*ATGILL
Trigger: TAACAATATCCCTGTTGCGCACACTAATTTTGCATG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR-3UTR CCA 90 bp TTACTGCTGAGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAAACCGTATGTTTAAATaGACCCATTTCTACCTCTCT +
Preference number: 2 (lower is better)
Translates to: LLLSYHFCPAWPKALNGRNRMFK*THFYLS
Trigger: AGAGAGGTAGAAATGGGTCCATTTAAACATACGGTT...TCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGATAATCTGCACATGCTaGTTTACAGACGATACATAT +
Preference number: 2 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKIICTC*FTDDTY
Trigger: ATATGTATCGTCTGTAAAGCAGCATGTGCAGATTAT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTTTCAGTCCTAGAGCCTaGAGTATTGTAATTTATTGT +
Preference number: 2 (lower is better)
Translates to: EITGVSCHLALKYNSLLFFSPRA*SIVIYC
Trigger: ACAATAAATTACAATACTGCAGGCTCTAGGACTGAA...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CCA 90 bp TTACTGCTGAGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGATGGATCAATAGGTTGTaGATGGTCAGAAATTGTAAA +
Preference number: 2 (lower is better)
Translates to: LLLSYHFCPAWPKALNGRWINRL*MVRNCK
Trigger: TTTACAATTTCTGACCATCCACAACCTATTGATCCA...TCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTAGGGTAAATAGATACTaGACCCTATCTCCATACTCC +
Preference number: 2 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFRVNRY*TLSPYS
Trigger: GGAGTATGGAGATAGGGTCCAGTATCTATTTACCCT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR CAA 90 bp AGATGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTaGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTC +
Preference number: 2 (lower is better)
Translates to: RCGRTVSNRSLINDG*LCAAELNVTKATLL
Trigger: GAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR CAA 90 bp AAAAACCAGGGCAAGATGATGACTTCAGCTTTAGATATGCTGTGTTaGAGATACCTTTATGAGATGTATAGCAGGTGGTTGGATATAATA +
Preference number: 2 (lower is better)
Translates to: KNQGKMMTSALDMLC*RYLYEMYSRWLDII
Trigger: TATTATATCCAACCACCTGCTATACATCTCATAAAGGTATCTCAAACACAGCATATCTAAAGCTGAAGTCATCATCTTGCCCTGGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTAACCTGTCAATTCAGTaGATTGTATGGTCATATGTA +
Preference number: 2 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFNLSIQ*IVWSYV
Trigger: TACATATGACCATACAATGCACTGAATTGACAGGTT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCAAACCTGTGATAGCTaGCTTCAGAATTTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWQTCDS*LQNFPK
Trigger: TTTAGGAAAATTCTGAAGCCAGCTATCACAGGTTTG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGAACCTGTCAATTCAGTaGATTGTATGGTCATATGTA +
Preference number: 2 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWNLSIQ*IVWSYV
Trigger: TACATATGACCATACAATGCACTGAATTGACAGGTT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
3UTR TCA 72 bp AGGCTGAGGTGGGAGAATCACTTGTGCCCAGGAAGCTaGGGTGCAGTAAACCATGTTCGTGCTATGTACTCC +
Preference number: 3 (lower is better)
Translates to: RLRWENHLCPGS*GAVNHVRAMYS
Trigger: GGAGTACATAGCACGAACATGGTTTACTGCACCTCAGCTTCCTGGGCACAAGTGATTCTCCCACCTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 72 bp GTTGGCAGTATTCAGTTTGACATTAAGGGCTGTTTGTaGACAGCTGGACTAGTCGGCCCTTCCCATACCCTC +
Preference number: 3 (lower is better)
Translates to: VGSIQFDIKGCL*TAGLVGPSHTL
Trigger: GAGGGTATGGGAAGGGCCGACTAGTCCAGCTGTTCACAAACAGCCCTTAATGTCAAACTGAATACTGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR GCA 72 bp GTCAGGTTCCAAACATGGGAGTTGGCCCTTGGATTATaGCCTCTTCATTACTTGTCCAGGGAAGACTTCCTG +
Preference number: 3 (lower is better)
Translates to: VRFQTWELALGL*PLHYLSREDFL
Trigger: CAGGAAGTCTTCCCTGGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp CCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGTGTaGCCTTGGGGAACAGCATTAGAACCTGGGAACGTC +
Preference number: 3 (lower is better)
Translates to: PSGYFNVVVSKV*PWGTALEPGNV
Trigger: GACGTTCCCAGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATACCCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 72 bp AGAGTAGGAGTTCGGGTAGTATGGCTCAATTACTGCTaGGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: RVGVRVVWLNYC*VTTFVLLGQKP
Trigger: GGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAATTGAGCCATACTACCCGAACTCCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR GCA 72 bp AGAAATCAACAACATGTGGCTGGGCAAGGAGGCACTTaGAATAATCTCAGCAGTTTAGGAGGCCAACACAGG +
Preference number: 3 (lower is better)
Translates to: RNQQHVAGQGGT*NNLSSLGGQHR
Trigger: CCTGTGTTGGCCTCCTAAACTGCTGAGATTATTGCAAGTGCCTCCTTGCCCAGCCACATGTTGTTGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CAA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGGTACTGCAAAAGCTTaGTTCCCCAGCACAGATCCC +
Preference number: 3 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKGTAKA*FPSTDP
Trigger: GGGATCTGTGCTGGGGAACAAAGCTTTTGCAGTACC...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CAA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAACTGGTCTCGAACTCTaGACCTCAAGCAATCCACCT +
Preference number: 3 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSTGLEL*TSSNPP
Trigger: AGGTGGATTGCTTGAGGTCAAGAGTTCGAGACCAGT...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 72 bp CATAGAAATACAAATTACTGGTTTACTACAGCCTACTaGACCACAGCCTCTGGGTGTAGGGCCCAGCGATCT +
Preference number: 3 (lower is better)
Translates to: HRNTNYWFTTAY*TTASGCRAQRS
Trigger: AGATCGCTGGGCCCTACACCCAGAGGCTGTGGTTCAGTAGGCTGTAGTAAACCAGTAATTTGTATTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp GGGTATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTaGGGAACAGCATTAGAACCTGGGAACGTCATAGAA +
Preference number: 3 (lower is better)
Translates to: GYFNVVVSKVWP*GTALEPGNVIE
Trigger: TTCTATGACGTTCCCAGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp AAATGGAGTCAGGTTCCAAACATGGGAGTTGGCCCTTaGATTATGCCCTCTTCATTACTTGTCCAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: KWSQVPNMGVGP*IMPSSLLVQGR
Trigger: TCTTCCCTGGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp TGCCTGAAAATGGAGTCAGGTTCCAAACATGGGAGTTaGCCCTTGGATTATGCCCTCTTCATTACTTGTCCA +
Preference number: 3 (lower is better)
Translates to: CLKMESGSKHGS*PLDYALFITCP
Trigger: TGGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp TATTACGTGCCTGAAAATGGAGTCAGGTTCCAAACATaGGAGTTGGCCCTTGGATTATGCCCTCTTCATTAC +
Preference number: 3 (lower is better)
Translates to: YYVPENGVRFQT*ELALGLCPLHY
Trigger: GTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTTTCAGGCACGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CAA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGGCCTCCCAGAGTCCTaGTTCTTTATCATATTCTGC +
Preference number: 3 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKGLPES*FFIIFC
Trigger: GCAGAATATGATAAAGAACAAGGACTCTGGGAGGCC...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CAA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAGGCAAAAGGCATAACTaGACCTTGAGCAAACTTGAG +
Preference number: 3 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSGKRHN*TLSKLE
Trigger: CTCAAGTTTGCTCAAGGTCAAGTTATGCCTTTTGCC...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 72 bp ACCAGACAAGGAGGGGTTACTTTTAGTCCAGACAAGTaGCTCCAAGCTGAGTCTTTAGATACAGAAACTGGA +
Preference number: 3 (lower is better)
Translates to: TRQGGVTFSPDK*LQAESLDTETG
Trigger: TCCAGTTTCTGTATCTAAAGACTCAGCTTGGAGTCACTTGTCTGGACTAAAAGTAACCCCTCCTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR GCA 72 bp ATCAGCAATGGTATGGAGGAGGGGAATAGCAGTATCTaGACCAACGTTAACAGACAGACAGGTGCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: ISNGMEEGNSSI*TNVNRQTGAFK
Trigger: TTTAAAAGCACCTGTCTGTCTGTTAACGTTGGTGCAGATACTGCTATTCCCCTCCTCCATACCATTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR-3UTR CAA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTATCACCTGCCACATTTaGAAATGGCACCAACTTCAA +
Preference number: 3 (lower is better)
Translates to: EITGVSCHLALKYNSLLFITCHI*KWHQLQ
Trigger: TTGAAGTTGGTGCCATTTCAAAATGTGGCAGGTGAT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp AAGAGAGACAGTGAAGGATGTAGTGCAAAGATGAAATaGTCAGGACCATTGTTTTGCAGCTGTGTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: KRDSEGCSAKMK*SGPLFCSCVEE
Trigger: TTCCTCTACACAGCTGCAAAACAATGGTCCTGACCATTTCATCTTTGCACTACATCCTTCACTGTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR TCA 72 bp TATGAGATGTATAGCAGGTGGTTGGATATAATAGTCTaGAACAGGGGCATGGACTGGGCTAGATGTATAGAT +
Preference number: 3 (lower is better)
Translates to: YEMYSRWLDIIV*NRGMDWARCID
Trigger: ATCTATACATCTAGCCCAGTCCATGCCCCTGTTTCAGACTATTATATCCAACCACCTGCTATACATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR GCA 72 bp TTTAACTTTACCCAACTAAGACATTCACACAACATATaGATGTCAGTCTCCTGTTCAGTCCTAGAGCCTGCA +
Preference number: 3 (lower is better)
Translates to: FNFTQLRHSHNI*MSVSCSVLEPA
Trigger: TGCAGGCTCTAGGACTGAACAGGAGACTGACATGCATATGTTGTGTGAATGTCTTAGTTGGGTAAAGTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CCA 72 bp GCTCAATTACTGCTGAGTTACCACTTTTGTCCTGCTTaGCCAAAAGCCCTAAATGGAAGAGTAGATGAAAAA +
Preference number: 3 (lower is better)
Translates to: AQLLLSYHFCPA*PKALNGRVDEK
Trigger: TTTTTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAATTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
3UTR CCA 72 bp TGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATaGTCATATGTAATGGTCCCCATGGTGAACAAACAT +
Preference number: 3 (lower is better)
Translates to: CLMINLSIQCIV*SYVMVPMVNKH
Trigger: ATGTTTGTTCACCATGGGGACCATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCCCGCCTGCTGGCGCTaGTGGAGCTGCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFPACWR*WSCCPL
Trigger: CAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTGCCTGCTGGCGCTGCTaGAGCTGCTGCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIACWRC*SCCPLP
Trigger: CGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGC...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTAGGCGCTCGCCATGTTaGCGGCCTCGATCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFRRSPC*RPRSRL
Trigger: CAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTCTCCCTGGCGAGGCGTaGGCCTGTCCCGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKILPGEA*ACPGVS
Trigger: GCTTACCCCGGGACAGGCCCACGCCTCGCCAGGGAG...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CTATTCACTAAGCAAGTGGGCACACAGCATTTTGCATCCACTGCCACTTCCTCCGGAGGCCCTCTTCATTaGACTTTGAGAGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFTKQVGTQHFASTATSSGGPLH*TLRGSG
Trigger: ACCTGAGCCTCTCAAAGTTCAATGAAGAGGGCCTCC...GGAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTACAGGCGTAAGCCACTaGGTCCAGCCCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPTGVSH*VQPSAF
Trigger: GAAGGCAGAGGGCTGGACGCAGTGGCTTACGCCTGT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCTCGATCCCGCCTGCTaGCGCTGCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFLDPAC*RCWSCC
Trigger: GCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTACGGCGCTGTTCGCGTaGGAACGAGCTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFTALFA*ERAHGR
Trigger: CCGCCCATGAGCTCGTTCTCACGCGAACAGCGCCGT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGACTCCTGTCTTCAAGTaGTCCCCCACCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKTPVFK*SPTLAS
Trigger: GGAGGCCAAGGTGGGGGATCACTTGAAGACAGGAGT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CTATTCACTAAGCAAGTGGGCACACAGCATTTTGCATCCACTGCCACTTCCTCCAACACAAGCCACCACTaGAGGAACCAAAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LFTKQVGTQHFASTATSSNTSHH*RNQSLN
Trigger: GTTCAGGCTTTGGTTCCTCCAGTGGTGGCTTGTGTT...GGAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTCAGGCCAGAGTGCAGTaGCGTGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIQARVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACTGCACTCTGGCCTG...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTTCAAGCAATTCCCCTaGCTCAGCCTCCCACACAGC +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPFKQFP*LSLPHS
Trigger: GCTGTGTGGGAGGCTGAGGCAGGGGAATTGCTTGAA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCAGGCTGGAGTGCAGTaGTGCATGCAATCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFQAGVQ*CMQSWV
Trigger: GACCCAAGATTGCATGCACCACTGCACTCCAGCCTG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 72 bp CTGAGGCTGGTGGGGCAGGCAGTAACCAGATCTAGTTaGTACTTATCCTATGGGCAAAAGAGAGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: LRLVGQAVTRSS*YLSYGQKRDSE
Trigger: TTCACTGTCTCTCTTTTGCCCATAGGATAAGTACAAACTAGATCTGGTTACTGCCTGCCCCACCAGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 72 bp GTGCCTGAAAATGGAGTCAGGTTCCAAACATGGGAGTaGGCCCTTGGATTATGCCCTCTTCATTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: VPENGVRFQTWE*ALGLCPLHYLS
Trigger: GGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAACTCCCATGTTTGGAACCTGACTCCATTTTCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGAGCTACTCGGGAGGCTaGGGTGGGAGAATCACTTGT +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKSYSGG*GGRITC
Trigger: ACAAGTGATTCTCCCACCTCAGCCTCCCGAGTAGCT...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAGCTACTTGGGAGGCTaGGGCAGGAGAATAGCTAGA +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKSYLGG*GRRIAR
Trigger: TCTAGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTCACCCAGGCTGGAGTaGAGTGGTGCATGCAATCTT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKSPRLE*SGACNL
Trigger: AAGATTGCATGCACCACTGCACTCCAGCCTGGGTGA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTGTGAGAACGAGCTCATaGGCGGCGGGGCGTACAGAA +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFVRTSS*AAGRTE
Trigger: TTCTGTACGCCCCGCCGCCCATGAGCTCGTTCTCAC...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCTGACCTACTACAGCTaGTCCCTCTTTAGGGCATGC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKLTYYS*SLFRAC
Trigger: GCATGCCCTAAAGAGGGACCAGCTGTAGTAGGTCAG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCTGACCTACTACAGCTaGTCCCTCTTTAGGGCATGC +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFLTYYS*SLFRAC
Trigger: GCATGCCCTAAAGAGGGACCAGCTGTAGTAGGTCAG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGCCAGCTCCGCCTCCTaGGTTCACGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWASSAS*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTGGC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTGGTGCATGCAATCTTaGGTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPWCMQS*VTATST
Trigger: GGTGGAGGTTGCAGTGACCCAAGATTGCATGCACCA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGATAGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWIVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACTAT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATTGTGCCCAGGAAGCTaGGGTGCAGTAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSLCPGS*GAVNHV
Trigger: AACATGGTTTACTGCACCTCAGCTTCCTGGGCACAA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTTGAGCCCAGGAGTTTaGGATCATCCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKLSPGV*DHPGQG
Trigger: ACCTTGTCCAGGATGATCTCAAACTCCTGGGCTCAA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTTTACTACAGCCTACTaGACCACAGCCTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKFTTAY*TTASGC
Trigger: ACACCCAGAGGCTGTGGTTCAGTAGGCTGTAGTAAA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGAGTTGTGAGAGATGCTaGGGCTGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWSCERC*GWWGRQ
Trigger: CTGCCTGCCCCACCAGCCTCAGCATCTCTCACAACT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACCAAGCACTTCGCAGCTaGACGTCTCACTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYQALRS*TSHFPT
Trigger: AGTTGGAAAGTGAGACGTGCAGCTGCGAAGTGCTTG...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCAAGCACTTCGCAGCTaGACGTCTCACTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKQALRS*TSHFPT
Trigger: AGTTGGAAAGTGAGACGTGCAGCTGCGAAGTGCTTG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCGGGCACACAGCATTTTaGATCCACTGCCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLLCAAELNVTKATLLTFGHTAF*IHCHFL
Trigger: GAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCC...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAGTCGGTCCAACCTCTaGAGTACTGCACTTGGACAA +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKSRSNL*STALGQ
Trigger: TTGTCCAAGTGCAGTACTGCAGAGGTTGGACCGACT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTGCTGGAGTGCAGTGGTaGATGCAATCTTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIAGVQW*MQSWVT
Trigger: AGTGACCCAAGATTGCATGCACCACTGCACTCCAGC...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCTAATGCAGAGCCACTaGAAGCTGGAGGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPLMQSH*KLEEVL
Trigger: GAGAACTTCCTCCAGCTTCCAGTGGCTCTGCATTAG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGTACCCCTTAAGCCGTaGAAGGAGAGTTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPVPLKP*KESFWI
Trigger: GATCCAGAAACTCTCCTTCCACGGCTTAAGGGGTAC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATCCAAGGTGTGGCCTTaGGGAACAGCATTAGAACCT +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSSKVWP*GTALEP
Trigger: AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAGTGGTTTCCAAGGTGTaGCCTTGGGGAACAGCATTA +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSVVSKV*PWGTAL
Trigger: TAATGCTGTTCCCCAAGGCCACACCTTGGAAACCAC...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TTACTGCTGAGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGATCCAAGGCTTCTAGCTaGACAGAGACATCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLLSYHFCPAWPKALNGRSKASS*TETSSC
Trigger: ACAGGAAGATGTCTCTGTTCAGCTAGAAGCCTTGGA...TCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTTCCAAGGCTTCTAGCTaGACAGAGACATCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFSKASS*TETSSC
Trigger: ACAGGAAGATGTCTCTGTTCAGCTAGAAGCCTTGGA...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGTCCAGGCAACAGAGTaGGACCTTGTCTTAAACACA +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFVQATE*DLVLNT
Trigger: TGTGTTTAAGACAAGGTCTCACTCTGTTGCCTGGAC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCTAAGATCAGGAGTTTaGAACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKLRSGV*NQPGQH
Trigger: ATGTTGGCCAGGCTGGTTTCAAACTCCTGATCTTAG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACAAAGGTGTTTCTCCCTaGTCCATTGCATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYKGVSP*SIASGS
Trigger: TGACCCTGATGCAATGGAGCAGGGAGAAACACCTTT...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAAAGGTGTTTCTCCCTaGTCCATTGCATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKKGVSP*SIASGS
Trigger: TGACCCTGATGCAATGGAGCAGGGAGAAACACCTTT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCAACCTCTGCAGTACTaGACTTGGACAAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKQPLQY*TWTKGR
Trigger: TCTACCCTTTGTCCAAGTGCAGTACTGCAGAGGTTG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCGATTAGCAGGCATTTaGCGCAGTCCAGTCAATAGA +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFRLAGI*RSPVNR
Trigger: TCTATTGACTGGACTGCGGCAAATGCCTGCTAATCG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CTATTCACTAAGCAAGTGGGCACACAGCATTTTGCATCCACTGCCACTTCCTCCTATTCACTAAGCAAGTaGGCACACAGCATTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LFTKQVGTQHFASTATSSYSLSK*AHSILH
Trigger: ATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATA...GGAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTAGCAAATTGGAAATGTaGTACGAGGCGCTCGCCATG +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKISKLEM*YEALAM
Trigger: CATGGCGAGCGCCTCGTACCACATTTCCAATTTGCT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGAACTGCATCAATCATaGCAGCTGTCAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFELHQS*QLSSCH
Trigger: GTGACAGCTTGACAGCTGCCATGATTGATGCAGTTC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTCTCTGCTTCTGGAATaGTTAGCAGTGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKSLLLE*LAVLLL
Trigger: CAGTAGCAGCACTGCTAACCATTCCAGAAGCAGAGA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTATTAGCTGGACGTGGTaGCACACACCTATACTCCCA +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIISWTW*HTPILP
Trigger: TGGGAGTATAGGTGTGTGCCACCACGTCCAGCTAAT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGAAATCAACAACATGTaGCTGGGCAAGGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPEINNM*LGKEAL
Trigger: AAGTGCCTCCTTGCCCAGCCACATGTTGTTGATTTC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTAGTTTGAAACCAGCCTaGCCAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFSLKPA*PTWQNS
Trigger: GGAGTTTTGCCATGTTGGCCAGGCTGGTTTCAAACT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTATAGATTAAGAAACTaGCTGGGGGACGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKYRLRN*LGDVAH
Trigger: GTGAGCCACGTCCCCCAGCCAGTTTCTTAATCTATA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCCTCTTCATTGAACTTTaGGAGGCTCAGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: GLLCAAELNVTKATLLTFLFIEL*EAQVTT
Trigger: GGTAGTGACCTGAGCCTCTCAAAGTTCAATGAAGAG...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGGGATCCACTTATCTTTaGAAGGGAGGAGGGATATAC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKGSTYL*KGGGIY
Trigger: GTATATCCCTCCTCCCTTTCAAAGATAAGTGGATCC...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTGCATAGGATGCAGCTaGTTTGACTTCTTCACTAGG +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKCIGCS*FDFFTR
Trigger: CCTAGTGAAGAAGTCAAATCAGCTGCATCCTATGCA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTCACCTGCCACATTTTaGAATGGCACCAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKSPATF*NGTNFN
Trigger: GTTGAAGTTGGTGCCATTTCAAAATGTGGCAGGTGA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGCTGCCATCTGGCCCTaGAGTACAATTCTTTACTAT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPAAIWP*STILYY
Trigger: ATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CTATTCACTAAGCAAGTGGGCACACAGCATTTTGCATCCACTGCCACTTCCTCCACCATCAGCATCCATTaGATTTTCATCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LFTKQVGTQHFASTATSSTISIH*IFIFIF
Trigger: GAAGATGAAGATGAAAATGCAATGGATGCTGATGGT...GGAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGAAAGGTGTTTCTCCCTaGTCCATTGCATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKKGVSP*SIASGS
Trigger: TGACCCTGATGCAATGGAGCAGGGAGAAACACCTTT...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CTATTCACTAAGCAAGTGGGCACACAGCATTTTGCATCCACTGCCACTTCCTCCGTACATACACTCAAATaGTGCCTTTCTAATATCCAG +
Preference number: 4 (lower is better)
Translates to: LFTKQVGTQHFASTATSSVHTLK*CLSNIQ
Trigger: CTGGATATTAGAAAGGCAGCATTTGAGTGTATGTAC...GGAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTTCCCTCTTTAGGGCATaGTCGAGTAAGGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFSLFRA*SSKGSY
Trigger: GTAGCTGCCCTTACTCGAGCATGCCCTAAAGAGGGA...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTATTACAGGCGTGAGCTaGCATCTGGCCCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFITGVS*HLALKY
Trigger: GTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAAT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCAGCTCATAACCAGATaGCCAAGAGCGATAATGGTT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKQLITR*PRAIMV
Trigger: AACCATTATCGCTCTTGGCCATCTGGTTATGAGCTG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGAATTCACTCATCAGTaGACTCTTCTCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPEFTHQ*TLLCFW
Trigger: CCAGAAGCAGAGAAGAGTCCACTGATGAGTGAATTC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCTGGGTATTTTAATGTaGTGGTTTCCAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFLGILM*WFPRCG
Trigger: GCCACACCTTGGAAACCACCACATTAAAATACCCAG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTATGGGAGTTGGCCCTTaGATTATGCCCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPMGVGP*IMPSSL
Trigger: TAATGAAGAGGGCATAATCCAAGGGCCAACTCCCAT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGTCAGGTTCCAAACATaGGAGTTGGCCCTTGGATTA +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKVRFQT*ELALGL
Trigger: TAATCCAAGGGCCAACTCCCATGTTTGGAACCTGAC...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 72 bp GAAGGATGTAGTGCAAAGATGAAATGGTCAGGACCATaGTTTTGCAGCTGTGTAGAGGAAGGACTGGGAATT +
Preference number: 4 (lower is better)
Translates to: EGCSAKMKWSGP*FCSCVEEGLGI
Trigger: AATTCCCAGTCCTTCCTCTACACAGCTGCAAAACAATGGTCCTGACCATTTCATCTTTGCACTACATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GTCTATCAAGACAACTGTCTAGAAGTGTGTACATACACTCAAATGCTGCCTTTCAGTACAGGAATGTGTTaGGTTAGGGCCCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: VYQDNCLEVCTYTQMLPFSTGMC*VRAPGN
Trigger: ATTACCTGGGGCCCTAACTCAACACATTCCTGTACT...GAAAGGCAGCATTTGAGTGTATGTACACACTTCTAGACAGTTGTCTTGATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTCAAACGAGGAAGGCTaGTCTAAAGGACGAATTACT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPSNEEG*SKGRIT
Trigger: AGTAATTCGTCCTTTAGATCAGCCTTCCTCGTTTGA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCTTTCCTTGACTTCCTaGTCAATGTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPLSLTS*SMSAAF
Trigger: AAAAGCAGCTGACATTGATCAGGAAGTCAAGGAAAG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATACTGCCTTTTGGGTTaGCTAGTTATTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSYCLLG*LVISCR
Trigger: CCTGCAAGAAATAACTAGTCAACCCAAAAGGCAGTA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTTTAAGGCCCACCACTaGTGCAGAGCTAATAATTTC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKFKAHH*CRANNF
Trigger: GAAATTATTAGCTCTGCATCAGTGGTGGGCCTTAAA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGACAAAAACAAACCTGTaGGGCCATTTGCACTTCAGT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKTKTNL*GHLHFS
Trigger: ACTGAAGTGCAAATGGCCTCACAGGTTTGTTTTTGT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGTTGGATATAATAGTCTaGAACAGGGGCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKLDIIV*NRGMDW
Trigger: CCAGTCCATGCCCCTGTTTCAGACTATTATATCCAA...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTTCTGCACACTCACAGTaGTTTAGTAATAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKISAHSQ*FSNKAQ
Trigger: CTGGGCCTTATTACTAAAGCACTGTGAGTGTGCAGA...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGGGGCAAGGAGGCACTTaGAATAATCTCAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKGQGGT*NNLSSL
Trigger: TAAACTGCTGAGATTATTGCAAGTGCCTCCTTGCCC...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGTTGGCCCTTGGATTATaGCCTCTTCATTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKLALGL*PLHYLS
Trigger: GGACAAGTAATGAAGAGGGCATAATCCAAGGGCCAA...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTGTGGTAGACTATGTCTaGACTCCACATCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFVVDYV*TPHPAT
Trigger: AGTGGCAGGATGTGGAGTCCAGACATAGTCTACCAC...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTAAGGACCAAGACATTTaGCAGCTAAATTCTGTACCT +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFKDQDI*QLNSVP
Trigger: AGGTACAGAATTTAGCTGTCAAATGTCTTGGTCCTT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACCATTCAGTGAGAAAATaGTTCCTGGTACAAGTACAG +
Preference number: 4 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYHSVRK*FLVQVQ
Trigger: CTGTACTTGTACCAGGAATCATTTTCTCACTGAATG...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCGCTTTGACAAGCTGTTaGGTAACAAGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLLCAAELNVTKATLLTFALTSC*VTRSAS
Trigger: TGAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGC...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTCTTGTTATGTGCTGCTaGATTAAATGTGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKILVMCC*IKCDQG
Trigger: GCCTTGGTCACATTTAATTCAGCAGCACATAACAAG...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAACTTTGACAAGCTGTTaGGTAACAAGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSTLTSC*VTRSAS
Trigger: TGAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGT...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGTTTAAGGCCCACCACTaGTGCAGAGCTAATAATTTC +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKFKAHH*CRANNF
Trigger: GAAATTATTAGCTCTGCATCAGTGGTGGGCCTTAAA...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAAACTCCTGCTTTACTaGGTTTGCCTTTACCTTAGT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKKLLLY*VCLYLS
Trigger: ACTAAGGTAAAGGCAAACTCAGTAAAGCAGGAGTTT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAAAACTCCTGCTTTACTaGGTTTGCCTTTACCTTAGT +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSKLLLY*VCLYLS
Trigger: ACTAAGGTAAAGGCAAACTCAGTAAAGCAGGAGTTT...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTGAAGAGGCTACAGTGTaGAATGAGCTCACTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFEEATV*NELTEG
Trigger: TCCTTCAGTGAGCTCATTTCACACTGTAGCCTCTTC...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGGCAAAAACATGTTGCTaGAAGATCTTGCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKAKTCC*KILPET
Trigger: AGTTTCAGGCAAGATCTTTCAGCAACATGTTTTTGC...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTGATGTAGTGCAAAGATaGAATGGTCAGGACCATTGT +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIDVVQR*NGQDHC
Trigger: ACAATGGTCCTGACCATTTCATCTTTGCACTACATC...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp TTACTGCTGAGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGACATCTTCCTGTTTTaGTATTGCACTTGTAAGACG +
Preference number: 4 (lower is better)
Translates to: LLLSYHFCPAWPKALNGRDIFLF*YCTCKT
Trigger: CGTCTTACAAGTGCAATAGCAAAACAGGAAGATGTC...TCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGACATCTTCCTGTTTTaGTATTGCACTTGTAAGACG +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFDIFLF*YCTCKT
Trigger: CGTCTTACAAGTGCAATAGCAAAACAGGAAGATGTC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTACAAGAAGTCCTCCTTaGCTGCTCAACATATCAGCC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFTRSPP*LLNISA
Trigger: GGCTGATATGTTGAGCAGGCAAGGAGGACTTCTTGT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCAAGCACTTCGCAGCTaGACGTCTCACTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWQALRS*TSHFPT
Trigger: AGTTGGAAAGTGAGACGTGCAGCTGCGAAGTGCTTG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCTCTGGAAGCATTTCATaGCTTGTGCTAACTACAGCA +
Preference number: 4 (lower is better)
Translates to: GLLCAAELNVTKATLLTFSGSIS*LVLTTA
Trigger: TGCTGTAGTTAGCACAAGGCATGAAATGCTTCCAGA...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCATGCGTGAAAAACATCTaGCTTTACATTCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSCVKNI*LYILFT
Trigger: CGTGAAGAGAATGTAAAGGCAGATGTTTTTCACGCA...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCTGGACCAGTCAGCATaGGCAACAAATCCATGTATC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFLDQSA*ATNPCI
Trigger: GATACATGGATTTGTTGCGCATGCTGACTGGTCCAG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGAGTCGGTCCAACCTCTaGAGTACTGCACTTGGACAA +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWSRSNL*STALGQ
Trigger: TTGTCCAAGTGCAGTACTGCAGAGGTTGGACCGACT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCATTCACACAACATATaGATGTCAGTCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFHSHNI*MSVSCS
Trigger: TGAACAGGAGACTGACATGCATATGTTGTGTGAATG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp AGGAAATCACCTATGCAGTTCTTTAACAGTGGATCAATAGGTTGTGGATGGTCACAGCTCATAACCAGATaGCCAAGAGCGATAATGGTT +
Preference number: 4 (lower is better)
Translates to: RKSPMQFFNSGSIGCGWSQLITR*PRAIMV
Trigger: AACCATTATCGCTCTTGGCCATCTGGTTATGAGCTG...TGACCATCCACAACCTATTGATCCACTGTTAAAGAACTGCATAGGTGATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGTACCCCTTAAGCCGTaGAAGGAGAGTTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWVPLKP*KESFWI
Trigger: GATCCAGAAACTCTCCTTCCACGGCTTAAGGGGTAC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTACTGATGGCCATTTGTaGAACATGCATATCACTTTC +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKITDGHL*NMHITF
Trigger: GAAAGTGATATGCATGTTTCACAAATGGCCATCAGT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAAATTATTTGTTCCAGTaGCAACCAGAGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSNYLFQ*QPELGK
Trigger: TTTTCCAAGCTCTGGTTGTCACTGGAACAAATAATT...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTGGAATCTGTAGACCTTaGGTTCTTGACATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIGICRP*VLDILN
Trigger: ATTCAAGATGTCAAGAACTCAAGGTCTACAGATTCC...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGAGTATGACACAGCATTaGAATTCTAAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKSMTQH*NSKHCC
Trigger: ACAGCAGTGCTTAGAATTTCAATGCTGTGTCATACT...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTATATACTTTGTCTTGTaGCTAACTAGAGCTTACAGG +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPIYFVL*LTRAYR
Trigger: CCTGTAAGCTCTAGTTAGTCACAAGACAAAGTATAT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGTAGATGAATTCCTGTTTTGCTATTaGACTTGTAAGACGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SYHFCPAWPKALNGRVDEFLFCY*TCKTSS
Trigger: ACTGGACGTCTTACAAGTGCAATAGCAAAACAGGAA...TTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTACAAGAAGTCCTCCTTaGCTGCTCAACATATCAGCC +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCATRSPP*LLNISA
Trigger: GGCTGATATGTTGAGCAGGCAAGGAGGACTTCTTGT...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTACCATCAGCATCCATTaGATTTTCATCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFTISIH*IFIFIF
Trigger: GAAGATGAAGATGAAAATGCAATGGATGCTGATGGT...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp TTACTGCTGAGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGACAAAAGAGAAAGGTATaGGTGAAAAACATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLLSYHFCPAWPKALNGRQKRKV*VKNICL
Trigger: AAGGCAGATGTTTTTCACGCATACCTTTCTCTTTTG...TCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGCAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTCATACACTCAAATGCTaGCTTTCTAATATCCAGACC +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIHTLKC*LSNIQT
Trigger: GGTCTGGATATTAGAAAGGCAGCATTTGAGTGTATG...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGGTACATACACTCAAATaGTGCCTTTCTAATATCCAG +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKVHTLK*CLSNIQ
Trigger: CTGGATATTAGAAAGGCAGCATTTGAGTGTATGTAC...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGTACATACACTCAAATaGTGCCTTTCTAATATCCAG +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPVHTLK*CLSNIQ
Trigger: CTGGATATTAGAAAGGCAGCATTTGAGTGTATGTAC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGGAGGGATATACTTTTaGCAAAGTGGTAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFGGIYF*QSGKKT
Trigger: AGTTTTCTTACCACTTTGGCAAAAGTATATCCCTCC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCAACCTCTGCAGTACTaGACTTGGACAAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWQPLQY*TWTKGR
Trigger: TCTACCCTTTGTCCAAGTGCAGTACTGCAGAGGTTG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCATGCAAAATTAGTGTaGGCAACAGGGATATTGTTA +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPHAKLV*ATGILL
Trigger: TAACAATATCCCTGTTGCGCACACTAATTTTGCATG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTTTTGACAATATTACGTaGCTGAAAATGGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EITGVSCHLALKYNSLLFFDNIT*LKMESG
Trigger: ACCTGACTCCATTTTCAGGCACGTAATATTGTCAAA...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGAACACAAGCCACCACTaGAGGAACCAAAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMNTSHH*RNQSLN
Trigger: GTTCAGGCTTTGGTTCCTCCAGTGGTGGCTTGTGTT...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAACCGTATGTTTAAATaGACCCATTTCTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKNRMFK*THFYLS
Trigger: AGAGAGGTAGAAATGGGTCCATTTAAACATACGGTT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTAACCGTATGTTTAAATaGACCCATTTCTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPNRMFK*THFYLS
Trigger: AGAGAGGTAGAAATGGGTCCATTTAAACATACGGTT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTCATCCTTTTACTTCTTaGTGGGGAGGCCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCAHPFTS*WGGPLH
Trigger: ATGAAGAGGGCCTCCCCACCAAGAAGTAAAAGGATG...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGAACTGCATCAATCATaGCAGCTGTCAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWELHQS*QLSSCH
Trigger: GTGACAGCTTGACAGCTGCCATGATTGATGCAGTTC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTTATCATCATCCAACTTaGTGGAATCTTTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIYHHPT*WNLSAV
Trigger: AACTGCAGAAAGATTCCATCAAGTTGGATGATGATA...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCCCTCATTCAGGTAAATaGTACAGTTACAATTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLLCAAELNVTKATLLTFPHSGK*YSYNSD
Trigger: GTCTGAATTGTAACTGTATCATTTACCTGAATGAGG...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTTGGCTCAATTACTGCTaGGTTACCACTTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCAWLNYC*VTTFVL
Trigger: CAGGACAAAAGTGGTAACTCAGCAGTAATTGAGCCA...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTTACTGCCTTTTGGGTTaGCTAGTTATTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFYCLLG*LVISCR
Trigger: CCTGCAAGAAATAACTAGTCAACCCAAAAGGCAGTA...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTGAATTTTTCAGTGGCTaGGGATTTTGTATACTTCCT +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIEFFSG*GFCILP
Trigger: AGGAAGTATACAAAATCCTCAGCCACTGAAAAATTC...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTTTTCAAAAACAGGTATaGATCTGGGGTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFFQKQV*IWGSSG
Trigger: ACCACTGCTACCCCAGATTCATACCTGTTTTTGAAA...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCAAGTGACTCCAAGCTaGGTCTTTAGATACAGAAAC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFQVTPS*VFRYRN
Trigger: GTTTCTGTATCTAAAGACTCAGCTTGGAGTCACTTG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGTTGATGGAATCTTTCTaGAGTTCCGTCATCAAATCA +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKLMESF*SSVIKS
Trigger: TGATTTGATGACGGAACTGCAGAAAGATTCCATCAA...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp GTCTATCAAGACAACTGTCTAGAAGTGTGTACATACACTCAAATGCTGCCTTTCTGCGTGAAAAACATCTaGCTTTACATTCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: VYQDNCLEVCTYTQMLPFCVKNI*LYILFT
Trigger: CGTGAAGAGAATGTAAAGGCAGATGTTTTTCACGCA...GAAAGGCAGCATTTGAGTGTATGTACACACTTCTAGACAGTTGTCTTGATAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACTTAGGAAATCACCTATaGAGTTCTTTAACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYLGNHL*SSLTVD
Trigger: ATCCACTGTTAAAGAACTGCATAGGTGATTTCCTAA...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp AGGAAATCACCTATGCAGTTCTTTAACAGTGGATCAATAGGTTGTGGATGGTCACATACACTCAAATGCTaGCTTTCTAATATCCAGACC +
Preference number: 4 (lower is better)
Translates to: RKSPMQFFNSGSIGCGWSHTLKC*LSNIQT
Trigger: GGTCTGGATATTAGAAAGGCAGCATTTGAGTGTATG...TGACCATCCACAACCTATTGATCCACTGTTAAAGAACTGCATAGGTGATTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTGTTTTTCAAACTCCTaGTTTACTGAGTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKCFSNS*FTEFAF
Trigger: AAAGGCAAACTCAGTAAAGCAGGAGTTTGAAAAACA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTGTTTTTCAAACTCCTaGTTTACTGAGTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPCFSNS*FTEFAF
Trigger: AAAGGCAAACTCAGTAAAGCAGGAGTTTGAAAAACA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAACCTGTCAATTCAGTaGATTGTATGGTCATATGTA +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKNLSIQ*IVWSYV
Trigger: TACATATGACCATACAATGCACTGAATTGACAGGTT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGCAACTTCAACATCAATaGACTAGTCAAAATCCTTAC +
Preference number: 4 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKQLQHQ*TSQNPY
Trigger: GTAAGGATTTTGACTAGTGCATTGATGTTGAAGTTG...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAGTCAGAATTGAAGGATaGAAATTAACAAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSVRIEG*KLTRSP
Trigger: AGGACTTCTTGTTAATTTCCATCCTTCAATTCTGAC...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp GTCTATCAAGACAACTGTCTAGAAGTGTGTACATACACTCAAATGCTGCCTTTCGGTCTTGTAGAATTCTaGAAGCATTTCATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VYQDNCLEVCTYTQMLPFGLVEF*KHFMPC
Trigger: ACAAGGCATGAAATGCTTCCAGAATTCTACAAGACC...GAAAGGCAGCATTTGAGTGTATGTACACACTTCTAGACAGTTGTCTTGATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCTGTAATTTTGTAAAATaGGTCTCCAACACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLCAAELNVTKATLLTFCNFVK*VSNTSH
Trigger: GTGGCTTGTGTTGGAGACCCATTTTACAAAATTACA...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACTGGATCAATAGGTTGTaGATGGTCAGAAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYWINRL*MVRNCK
Trigger: TTTACAATTTCTGACCATCCACAACCTATTGATCCA...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp AGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGTAGATGAAAACCGTATGTTTAAATaGACCCATTTCTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: SYHFCPAWPKALNGRVDENRMFK*THFYLS
Trigger: AGAGAGGTAGAAATGGGTCCATTTAAACATACGGTT...TTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGTGACAACCAGAGCTTaGAAAAAGTCTAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWVTTRA*KKSSMA
Trigger: TGCCATGCTAGACTTTTTCCAAGCTCTGGTTGTCAC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCAGCAACAACATTTCTaGTTCCTTCCTCTGCACACT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWQQQHF*FLPLHT
Trigger: AGTGTGCAGAGGAAGGAACCAGAAATGTTGTTGCTG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCTGCAGTACTGCACTTaGACAAAGGGTAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMLQYCT*TKGRQS
Trigger: AGACTGTCTACCCTTTGTCCAAGTGCAGTACTGCAG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCTGCTACTGCTCTCATaGCAGATCGCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFLLLLS*QIALIH
Trigger: ATGAATTAAAGCGATCTGCCATGAGAGCAGTAGCAG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTCTCTGCTTCTGGAATaGTTAGCAGTGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMSLLLE*LAVLLL
Trigger: CAGTAGCAGCACTGCTAACCATTCCAGAAGCAGAGA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGAATTCACTCATCAGTaGACTCTTCTCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWEFTHQ*TLLCFW
Trigger: CCAGAAGCAGAGAAGAGTCCACTGATGAGTGAATTC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGTTATCTGATGAGATTTaGGTAGCCTGTAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKLSDEI*VACSQI
Trigger: TATTTGGCTACAGGCTACCCAAATCTCATCAGATAA...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCCATCAGCAATGGTATaGAGGAGGGGAATAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMPSAMV*RRGIAV
Trigger: TACTGCTATTCCCCTCCTCCATACCATTGCTGATGG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTTTAGATACAGAAACTaGAACTACGTTGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPFRYRN*NYVGSI
Trigger: AATACTGCCAACGTAGTTCCAGTTTCTGTATCTAAA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
3UTR CAA 72 bp GGCAAGATGATGACTTCAGCTTTAGATATGCTGTGTTaGAGATACCTTTATGAGATGTATAGCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GKMMTSALDMLC*RYLYEMYSRWL
Trigger: CAACCACCTGCTATACATCTCATAAAGGTATCTCAAACACAGCATATCTAAAGCTGAAGTCATCATCTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCATTCAGTGAGAAAATaGTTCCTGGTACAAGTACAG +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFHSVRK*FLVQVQ
Trigger: CTGTACTTGTACCAGGAATCATTTTCTCACTGAATG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTCTTGTTATGTGCTGCTaGATTAAATGTGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCALVMCC*IKCDQG
Trigger: GCCTTGGTCACATTTAATTCAGCAGCACATAACAAG...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCTCTCCAAGAAAATCTaGAGTGTATTAGGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFLSKKI*SVLGKS
Trigger: TGACTTGCCTAATACACTTCAGATTTTCTTGGAGAG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGGGATCCACTTATCTTTaGAAGGGAGGAGGGATATAC +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMGSTYL*KGGGIY
Trigger: GTATATCCCTCCTCCCTTTCAAAGATAAGTGGATCC...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCCACTTAAGTCAATATaGTGCCCAACTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWPLKSI*CPTSPR
Trigger: TCTTGGAGAAGTTGGGCATCATATTGACTTAAGTGG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTGCATAGGATGCAGCTaGTTTGACTTCTTCACTAGG +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMCIGCS*FDFFTR
Trigger: CCTAGTGAAGAAGTCAAATCAGCTGCATCCTATGCA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCTGGATCAATTAGAGTaGGTTTTCCTAGACATTCAG +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFLDQLE*VFLDIQ
Trigger: CTGAATGTCTAGGAAAACTCACTCTAATTGATCCAG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGACCTTGAGCAAACTTaGGAAGGCAAGGGAAATATT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWDLEQT*EGKGNI
Trigger: AATATTTCCCTTGCCTTCTCAAGTTTGCTCAAGGTC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGTCTGGAAGCATTTCATaGCTTGTGCTAACTACAGCA +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWSGSIS*LVLTTA
Trigger: TGCTGTAGTTAGCACAAGGCATGAAATGCTTCCAGA...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTTGCGTGAAAAACATCTaGCTTTACATTCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFCVKNI*LYILFT
Trigger: CGTGAAGAGAATGTAAAGGCAGATGTTTTTCACGCA...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp AGGAAATCACCTATGCAGTTCTTTAACAGTGGATCAATAGGTTGTGGATGGTCACAACTGGTGTTACACTaGCTATTACTTTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: RKSPMQFFNSGSIGCGWSQLVLH*LLLLHF
Trigger: AAAGTGCAAAAGTAATAGGCAGTGTAACACCAGTTG...TGACCATCCACAACCTATTGATCCACTGTTAAAGAACTGCATAGGTGATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTTTACCACTTTTGTCCTaGTTGGCCAAAAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCALPLLS*LAKSPK
Trigger: TTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAA...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR GCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTCTGCACACTCACAGTaGTTTAGTAATAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMSAHSQ*FSNKAQ
Trigger: CTGGGCCTTATTACTAAAGCACTGTGAGTGTGCAGA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTATAATCTGCACATGCTaGTTTACAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIIICTC*FTDDTY
Trigger: ATATGTATCGTCTGTAAAGCAGCATGTGCAGATTAT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTTGGATCAATAGGTTGTaGATGGTCAGAAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: WVACSQILPLCSTFATKIWINRL*MVRNCK
Trigger: TTTACAATTTCTGACCATCCACAACCTATTGATCCA...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCAGCAACAACATTTCTaGTTCCTTCCTCTGCACACT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMQQQHF*FLPLHT
Trigger: AGTGTGCAGAGGAAGGAACCAGAAATGTTGTTGCTG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCTGCTACTGCTCTCATaGCAGATCGCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWLLLLS*QIALIH
Trigger: ATGAATTAAAGCGATCTGCCATGAGAGCAGTAGCAG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTTCCATTCCAGTATCTaGACCACATCACCACTAGGA +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMFHSSI*TTSPLG
Trigger: TCCTAGTGGTGATGTGGTCCAGATACTGGAATGGAA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCTTGTTATGTGCTGCTaGATTAAATGTGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMLVMCC*IKCDQG
Trigger: GCCTTGGTCACATTTAATTCAGCAGCACATAACAAG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGACTGATGGCCATTTGTaGAACATGCATATCACTTTC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWTDGHL*NMHITF
Trigger: GAAAGTGATATGCATGTTTCACAAATGGCCATCAGT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGGAATCTGTAGACCTTaGGTTCTTGACATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWGICRP*VLDILN
Trigger: ATTCAAGATGTCAAGAACTCAAGGTCTACAGATTCC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCCACTTAAGTCAATATaGTGCCCAACTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMPLKSI*CPTSPR
Trigger: TCTTGGAGAAGTTGGGCATCATATTGACTTAAGTGG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTACCATCAGCATCCATTaGATTTTCATCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFTISIH*IFIFIF
Trigger: GAAGATGAAGATGAAAATGCAATGGATGCTGATGGT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCATACACTCAAATGCTaGCTTTCTAATATCCAGACC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWHTLKC*LSNIQT
Trigger: GGTCTGGATATTAGAAAGGCAGCATTTGAGTGTATG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGTTTGATATAAGGAGTTaGATCAAACGAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWFDIRS*IKRGRL
Trigger: CAGCCTTCCTCGTTTGATGCAACTCCTTATATCAAA...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCATGCAAAATTAGTGTaGGCAACAGGGATATTGTTA +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFHAKLV*ATGILL
Trigger: TAACAATATCCCTGTTGCGCACACTAATTTTGCATG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTTGTAATTTTGTAAAATaGGTCTCCAACACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFCNFVK*VSNTSH
Trigger: GTGGCTTGTGTTGGAGACCCATTTTACAAAATTACA...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTTTCTTACACGTCAACTaGTGTTACACTGCCTATTAC +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCAFLHVN*CYTAYY
Trigger: GTAATAGGCAGTGTAACACCAGTTGACGTGTAAGAA...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGATTCAGTGCATTGTATaGTCATATGTAATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWIQCIV*SYVMVP
Trigger: GGGGACCATTACATATGACCATACAATGCACTGAAT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCAAACCTGTGATAGCTaGCTTCAGAATTTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFQTCDS*LQNFPK
Trigger: TTTAGGAAAATTCTGAAGCCAGCTATCACAGGTTTG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGGGTATTTTAATGTGGTaGTTTCCAAGGTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMGILMW*FPRCGL
Trigger: AAGGCCACACCTTGGAAACCACCACATTAAAATACC...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGAATTATTTGTTCCAGTaGCAACCAGAGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWNYLFQ*QPELGK
Trigger: TTTTCCAAGCTCTGGTTGTCACTGGAACAAATAATT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR TCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGTCAGGAACCTACATGTaGCAAATTCCTAAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWSGTYM*QIPKFN
Trigger: GTTAAACTTAGGAATTTGTCACATGTAGGTTCCTGA...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTTCCTGTTTTGCTATTaGACTTGTAAGACGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMFLFCY*TCKTSS
Trigger: ACTGGACGTCTTACAAGTGCAATAGCAAAACAGGAA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGGAGGGATATACTTTTaGCAAAGTGGTAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWGGIYF*QSGKKT
Trigger: AGTTTTCTTACCACTTTGGCAAAAGTATATCCCTCC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTATAATCTGCACATGCTaGTTTACAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFIICTC*FTDDTY
Trigger: ATATGTATCGTCTGTAAAGCAGCATGTGCAGATTAT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGAGTGCAAAGATGAAATaGTCAGGACCATTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMSAKMK*SGPLFC
Trigger: GCAAAACAATGGTCCTGACCATTTCATCTTTGCACT...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCAAAAGAGAAAGGTATaGGTGAAAAACATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMQKRKV*VKNICL
Trigger: AAGGCAGATGTTTTTCACGCATACCTTTCTCTTTTG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGTTAGGAAATCACCTATaGAGTTCTTTAACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWLGNHL*SSLTVD
Trigger: ATCCACTGTTAAAGAACTGCATAGGTGATTTCCTAA...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGCAACTTCAACATCAATaGACTAGTCAAAATCCTTAC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWQLQHQ*TSQNPY
Trigger: GTAAGGATTTTGACTAGTGCATTGATGTTGAAGTTG...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGAGCAGAATTTTATGGTaGTTCCTTATGTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMSRILW*FLMSVF
Trigger: GAAGACTGACATAAGGAAGCACCATAAAATTCTGCT...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTGTCAGAATTGAAGGATaGAAATTAACAAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCAVRIEG*KLTRSP
Trigger: AGGACTTCTTGTTAATTTCCATCCTTCAATTCTGAC...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp TGTGGAAGAACAGTATCCAATAGATCCCTTATTAATGATGGCTTGTTATGTGCTTGTTCACATTTTAAATaGAGACGAACACACAGGAAA +
Preference number: 4 (lower is better)
Translates to: CGRTVSNRSLINDGLLCACSHFK*RRTHRK
Trigger: TTTCCTGTGTGTTCGTCTCCATTTAAAATGTGAACA...AGCACATAACAAGCCATCATTAATAAGGGATCTATTGGATACTGTTCTTCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCAAACCTGTGATAGCTaGCTTCAGAATTTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMQTCDS*LQNFPK
Trigger: TTTAGGAAAATTCTGAAGCCAGCTATCACAGGTTTG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CCA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGTCTCATCCATTCTTATaGTTGCATGTTGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWSHPFL*LHVVDF
Trigger: GAAATCAACAACATGCAACCATAAGAATGGATGAGA...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTACAGCAGAATTTTATaGTGCTTCCTTATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMYSRIL*CFLMSV
Trigger: GACTGACATAAGGAAGCACCATAAAATTCTGCTGTA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR GCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTTAGGAAATCACCTATaGAGTTCTTTAACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMLGNHL*SSLTVD
Trigger: ATCCACTGTTAAAGAACTGCATAGGTGATTTCCTAA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR GCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTTCAGTCCTAGAGCCTaGAGTATTGTAATTTATTGT +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMFSPRA*SIVIYC
Trigger: ACAATAAATTACAATACTGCAGGCTCTAGGACTGAA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CCA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTGGATCAATAGGTTGTaGATGGTCAGAAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMWINRL*MVRNCK
Trigger: TTTACAATTTCTGACCATCCACAACCTATTGATCCA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS GCA 90 bp CGAGGCGCTCGCCATGTTGACGGCCTCGATCCCGCCTGCTGGCGCTaGTGGAGCTGCTGCCCGCTGCCGCTGCCGCCGCCGCCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: RGARHVDGLDPACWR*WSCCPLPLPPPPPP
Trigger: TGGCGGCGGCGGCGGCGGCAGCGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS CCA 90 bp GGCGCTCGCCATGTTGACGGCCTCGATCCCGCCTGCTGGCGCTGCTaGAGCTGCTGCCCGCTGCCGCTGCCGCCGCCGCCGCCGCCACTG +
Preference number: 5 (lower is better)
Translates to: GARHVDGLDPACWRC*SCCPLPLPPPPPPL
Trigger: CAGTGGCGGCGGCGGCGGCGGCAGCGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS GCA 90 bp CGCCATGTTGACGGCCTCGATCCCGCCTGCTGGCGCTGCTGGAGCTaGTGCCCGCTGCCGCTGCCGCCGCCGCCGCCGCCACTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RHVDGLDPACWRCWS*CPLPLPPPPPPLEL
Trigger: GAGCTCCAGTGGCGGCGGCGGCGGCGGCAGCGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS GCA 90 bp CATGTTGACGGCCTCGATCCCGCCTGCTGGCGCTGCTGGAGCTGCTaGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCACTGGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HVDGLDPACWRCWSC*PLPLPPPPPPLELL
Trigger: GAGGAGCTCCAGTGGCGGCGGCGGCGGCGGCAGCGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS CCA 90 bp GTGGTACGAGGCGCTCGCCATGTTGACGGCCTCGATCCCGCCTGCTaGCGCTGCTGGAGCTGCTGCCCGCTGCCGCTGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VVRGARHVDGLDPAC*RCWSCCPLPLPPPP
Trigger: CGGCGGCGGCGGCAGCGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCTCGTACCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS CCA 90 bp CAGCAGCTTGGGCCCCAGCGAGCAAGGCGGCCTAGCGCCGCAGGATaGCAAGCGAATAGGCCCGGCGCCCGGTCTCCCGGCCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: QQLGPQRARRPSAAG*QANRPGARSPGLEQ
Trigger: TTGCTCTAGGCCGGGAGACCGGGCGCCGGGCCTATTCGCTTGCCATCCTGCGGCGCTAGGCCGCCTTGCTCGCTGGGGCCCAAGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540525.1
CDS CCA 90 bp CAGAGCCAGCCTAACGACGGCGCTGTTCGCGTGAGAACGAGCTCATaGGCGGCGGGGCGTACAGAAGGGCCTCTACGGGGAGCCAGACAC +
Preference number: 5 (lower is better)
Translates to: QSQPNDGAVRVRTSS*AAGRTEGPLRGARH
Trigger: GTGTCTGGCTCCCCGTAGAGGCCCTTCTGTACGCCCCGCCGCCCATGAGCTCGTTCTCACGCGAACAGCGCCGTCGTTAGGCTGGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS TCA 90 bp GTAAGCCGAGGCTACAGAGCCAGCCTAACGACGGCGCTGTTCGCGTaGGAACGAGCTCATGGGCGGCGGGGCGTACAGAAGGGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: VSRGYRASLTTALFA*ERAHGRRGVQKGLY
Trigger: GTAGAGGCCCTTCTGTACGCCCCGCCGCCCATGAGCTCGTTCTCACGCGAACAGCGCCGTCGTTAGGCTGGCTCTGTAGCCTCGGCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS-3UTR CAA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGGAGGCGCTCGCCATGTaGACGGCCTCGATCCCGCCT +
Preference number: 5 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKEALAM*TASIPP
Trigger: AGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCTC...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGAGGCCAACACAGGATaGCTTGAGCCCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPEANTG*LEPRSL
Trigger: CAAACTCCTGGGCTCAAGCAATCCTGTGTTGGCCTC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTAGCAATCCACCTGCCTaGGCCTCCCAGAGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: WVACSQILPLCSTFATKISNPPA*ASQSPC
Trigger: ACAAGGACTCTGGGAGGCCAAGGCAGGTGGATTGCT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGTGGTGCATGCAATCTaGGGTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: EITGVSCHLALKYNSLLFVVHAI*GHCNLH
Trigger: GTGGAGGTTGCAGTGACCCAAGATTGCATGCACCAC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS GCA 90 bp GTTGTACATGTTGCACGTAATGGCTCAACAAGTCGGTCCAACCTCTaGAGTACTGCACTTGGACAAAGGGTAGACAGTCTCACCAACATT +
Preference number: 5 (lower is better)
Translates to: VVHVARNGSTSRSNL*STALGQRVDSLTNI
Trigger: AATGTTGGTGAGACTGTCTACCCTTTGTCCAAGTGCAGTACTGCAGAGGTTGGACCGACTTGTTGAGCCATTACGTGCAACATGTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACTTTCTCCCTGCTCCATaGCATCAGGGTCACATAGCC +
Preference number: 5 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYFLPAP*HQGHIA
Trigger: GGCTATGTGACCCTGATGCAATGGAGCAGGGAGAAA...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGTTTCTCCCTGCTCCATaGCATCAGGGTCACATAGCC +
Preference number: 5 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKFLPAP*HQGHIA
Trigger: GGCTATGTGACCCTGATGCAATGGAGCAGGGAGAAA...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CTATTCACTAAGCAAGTGGGCACACAGCATTTTGCATCCACTGCCACTTCCTCCCCTGACTCTGAAGCATaGTTAAAGGTGTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: LFTKQVGTQHFASTATSSPDSEA*LKVFLP
Trigger: AGGGAGAAACACCTTTAACAATGCTTCAGAGTCAGG...GGAGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCACTTGCTTAGTGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp TCTGACAAATTTCTAGAAGGCAGAAAGCTGGGGGCATCAGAGTACAGAAAGTCAGGTACTGCAAAAGCTTaGTTCCCCAGCACAGATCCC +
Preference number: 5 (lower is better)
Translates to: SDKFLEGRKLGASEYRKSGTAKA*FPSTDP
Trigger: GGGATCTGTGCTGGGGAACAAAGCTTTTGCAGTACC...TGACTTTCTGTACTCTGATGCCCCCAGCTTTCTGCCTTCTAGAAATTTGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCTTGAGCCCAGGAGTTaGAGATCATCCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPLEPRS*RSSWTR
Trigger: CCTTGTCCAGGATGATCTCAAACTCCTGGGCTCAAG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTTTCCAAGGTGTGGCCTaGGGGAACAGCATTAGAACC +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPFQGVA*GNSIRT
Trigger: GGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAA...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp AGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGTAGATGAATGGGCACACAGCATTTaGCATCCACTGCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: SYHFCPAWPKALNGRVDEWAHSI*HPLPLP
Trigger: AGGAAGTGGCAGTGGATGCAAAATGCTGTGTGCCCA...TTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp ACTACCACACATGGAAACCTAAGAGTAGGAGTTCGGGTAGTATGGCTCAATTACCCACTTTTGTCCTGCTaGGCCAAAAGCCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: TTTHGNLRVGVRVVWLNYPLLSC*AKSPKW
Trigger: CCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGG...GTAATTGAGCCATACTACCCGAACTCCTACTCTTAGGTTTCCATGTGTGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp GTCTATCAAGACAACTGTCTAGAAGTGTGTACATACACTCAAATGCTGCCTTTCGGGAGGCCCTCTTCATaGAACTTTGAGAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VYQDNCLEVCTYTQMLPFGRPSS*NFERLR
Trigger: CCTGAGCCTCTCAAAGTTCAATGAAGAGGGCCTCCC...GAAAGGCAGCATTTGAGTGTATGTACACACTTCTAGACAGTTGTCTTGATAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTCAGGGTCTCACTATGTaGCCTAGAGCTGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: WVACSQILPLCSTFATKIQGLTM*PRAGLQ
Trigger: TTGGAGACCAGCTCTAGGCAACATAGTGAGACCCTG...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGGTCAGGACCATTGTTTaGCAGCTGTGTAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKVRTIV*QLCRGR
Trigger: CCTTCCTCTACACAGCTGCAAAACAATGGTCCTGAC...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGTGAGGATGGAAGACTaGAGGAGAATGGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: EITGVSCHLALKYNSLLFVRMED*RRMVTE
Trigger: CTCTGTAACCATTCTCCTCAAGTCTTCCATCCTCAC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp AGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGTAGATGAAACATCCTTTTACTTCTaGGTGGGGAGGCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SYHFCPAWPKALNGRVDETSFYF*VGRPSS
Trigger: TGAAGAGGGCCTCCCCACCAAGAAGTAAAAGGATGT...TTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGAGATATTCAGGAAGGTaGCCCACACTAATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKRYSGR*PTLMLP
Trigger: AGGCAGCATTAGTGTGGGCAACCTTCCTGAATATCT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTAGATATTCAGGAAGGTaGCCCACACTAATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPRYSGR*PTLMLP
Trigger: AGGCAGCATTAGTGTGGGCAACCTTCCTGAATATCT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGCCTAAGATCAGGAGTTaGAAACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKPKIRS*KPAWPT
Trigger: TGTTGGCCAGGCTGGTTTCAAACTCCTGATCTTAGG...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp AGGAAGGACTGGGAATTAATGCCTTCTGGGTATTTTAATGTGGTGGTTTCCAAGTGCCCTCTTCATTACTaGTCCAGGGAAGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: RKDWELMPSGYFNVVVSKCPLHY*SREDFL
Trigger: CAGGAAGTCTTCCCTGGACAAGTAATGAAGAGGGCA...CTTGGAAACCACCACATTAAAATACCCAGAAGGCATTAATTCCCAGTCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCAACAAGAAGTCCTCCTaGCCTGCTCAACATATCAGC +
Preference number: 5 (lower is better)
Translates to: GLLCAAELNVTKATLLTFNKKSS*PAQHIS
Trigger: GCTGATATGTTGAGCAGGCAAGGAGGACTTCTTGTT...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTAACAAGAAGTCCTCCTaGCCTGCTCAACATATCAGC +
Preference number: 5 (lower is better)
Translates to: WVACSQILPLCSTFATKINKKSS*PAQHIS
Trigger: GCTGATATGTTGAGCAGGCAAGGAGGACTTCTTGTT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTCCTGACTCTGAAGCATaGTTAAAGGTGTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPPDSEA*LKVFLP
Trigger: AGGGAGAAACACCTTTAACAATGCTTCAGAGTCAGG...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GGCTTGTTATGTGCTGCTGAATTAAATGTGACCAAGGCTACTCTTCTCACATTCGTGAGGATGGAAGACTaGAGGAGAATGGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: GLLCAAELNVTKATLLTFVRMED*RRMVTE
Trigger: CTCTGTAACCATTCTCCTCAAGTCTTCCATCCTCAC...GAATGTGAGAAGAGTAGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp AGGAAATCACCTATGCAGTTCTTTAACAGTGGATCAATAGGTTGTGGATGGTCAGCTGAGTTACCACTTTaGTCCTGCTTGGCCAAAAGC +
Preference number: 5 (lower is better)
Translates to: RKSPMQFFNSGSIGCGWSAELPL*SCLAKS
Trigger: GCTTTTGGCCAAGCAGGACAAAAGTGGTAACTCAGC...TGACCATCCACAACCTATTGATCCACTGTTAAAGAACTGCATAGGTGATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTGGCAAAAGGCATAACTaGACCTTGAGCAAACTTGAG +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPGKRHN*TLSKLE
Trigger: CTCAAGTTTGCTCAAGGTCAAGTTATGCCTTTTGCC...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS TCA 90 bp CCTTGCCTGCTCAACATATCAGCCATAATATCCAAGGCTTCTAGCTaGACAGAGACATCTTCCTGTTTTGCTATTGCACTTGTAAGACGT +
Preference number: 5 (lower is better)
Translates to: PCLLNISAIISKASS*TETSSCFAIALVRR
Trigger: ACGTCTTACAAGTGCAATAGCAAAACAGGAAGATGTCTCTGTTCAGCTAGAAGCCTTGGATATTATGGCTGATATGTTGAGCAGGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535146.1
ENST00000540319.5
ENST00000545606.6
CDS GCA 90 bp ATCTTGAATAAACTGACCTACTACAGCTGGTCCCTCTTTAGGGCATaGTCGAGTAAGGGCAGCTACACATTTGGCAATGGAATAATAAGA +
Preference number: 5 (lower is better)
Translates to: ILNKLTYYSWSLFRA*SSKGSYTFGNGIIR
Trigger: TCTTATTATTCCATTGCCAAATGTGTAGCTGCCCTTACTCGAGCATGCCCTAAAGAGGGACCAGCTGTAGTAGGTCAGTTTATTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGGTACTGCAAAAGCTTaGTTCCCCAGCACAGATCCC +
Preference number: 5 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWGTAKA*FPSTDP
Trigger: GGGATCTGTGCTGGGGAACAAAGCTTTTGCAGTACC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGATCACCTGCCACATTTaGAAATGGCACCAACTTCAA +
Preference number: 5 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKITCHI*KWHQLQ
Trigger: TTGAAGTTGGTGCCATTTCAAAATGTGGCAGGTGAT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTACTGGTCTCGAACTCTaGACCTCAAGCAATCCACCT +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFTGLEL*TSSNPP
Trigger: AGGTGGATTGCTTGAGGTCAAGAGTTCGAGACCAGT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS GCA 90 bp AGTGAACTAATCAGGATGCAATATTTTGGTTATCTCTTCCCTCACTaGATAGGTTGGCATAACTCTAGTCTGCAGTCATGGTACACACAG +
Preference number: 5 (lower is better)
Translates to: SELIRMQYFGYLFPH*IGWHNSSLQSWYTQ
Trigger: CTGTGTGTACCATGACTGCAGACTAGAGTTATGCCAACCTATGCAGTGAGGGAAGAGATAACCAAAATATTGCATCCTGATTAGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539434.1
CDS-3UTR CAA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTCTATCATCATCCAACTaGATGGAATCTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: EITGVSCHLALKYNSLLFLSSSN*MESFCS
Trigger: ACTGCAGAAAGATTCCATCAAGTTGGATGATGATAG...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTTTCTCCCTGCTCCATaGCATCAGGGTCACATAGCC +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMFLPAP*HQGHIA
Trigger: GGCTATGTGACCCTGATGCAATGGAGCAGGGAGAAA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp AGTTACCACTTTTGTCCTGCTTGGCCAAAAGCCCTAAATGGAAGAGTAGATGAAAGCTTTGACAAGCTGTaGAGTAACAAGAAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SYHFCPAWPKALNGRVDESFDKL*SNKKCF
Trigger: GAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGCT...TTCATCTACTCTTCCATTTAGGGCTTTTGGCCAAGCAGGACAAAAGTGGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp GGAGCACCACAAATTTTAAGGAAGAGGCTACAGTGTGAAATGAGCTCACTGAAGATACTGCCTTTTGGGTaGACTAGTTATTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GAPQILRKRLQCEMSSLKILPFG*TSYFLQ
Trigger: CTGCAAGAAATAACTAGTCAACCCAAAAGGCAGTAT...CTTCAGTGAGCTCATTTCACACTGTAGCCTCTTCCTTAAAATTTGTGGTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp TATTTTAATGTGGTGGTTTCCAAGGTGTGGCCTTGGGGAACAGCATTAGAACCTATACTGCCTTTTGGGTaGACTAGTTATTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: YFNVVVSKVWPWGTALEPILPFG*TSYFLQ
Trigger: CTGCAAGAAATAACTAGTCAACCCAAAAGGCAGTAT...AGGTTCTAATGCTGTTCCCCAAGGCCACACCTTGGAAACCACCACATTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS TCA 90 bp TCATTCAGTGAGAAAATGATTCCTGGTACAAGTACAGGAATGTGTTaGGTTAGGGCCCCAGGTAATACATTTACCAGCTCAGTTAACATG +
Preference number: 5 (lower is better)
Translates to: SFSEKMIPGTSTGMC*VRAPGNTFTSSVNM
Trigger: CATGTTAACTGAGCTGGTAAATGTATTACCTGGGGCCCTAACTCAACACATTCCTGTACTTGTACCAGGAATCATTTTCTCACTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540319.5
ENST00000545606.6
CDS GCA 90 bp ACTACTTTCCTTTCACTATCATCATCCAACTTGATGGAATCTTTCTaGAGTTCCGTCATCAAATCATTTGTAGCCATAAACCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: TTFLSLSSSNLMESF*SSVIKSFVAINLRA
Trigger: TGCCCGCAGGTTTATGGCTACAAATGATTTGATGACGGAACTGCAGAAAGATTCCATCAAGTTGGATGATGATAGTGAAAGGAAAGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540525.1
CDS GCA 90 bp TTCGGGCATATGATGAGCTTTGACAAGCTGTTGAGTAACAAGAAGTaGTTCAGATGTAATTTTGTAAAATGGGTCTCCAACACAAGCCAC +
Preference number: 5 (lower is better)
Translates to: FGHMMSFDKLLSNKK*FRCNFVKWVSNTSH
Trigger: GTGGCTTGTGTTGGAGACCCATTTTACAAAATTACATCTGAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGCTCATCATATGCCCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS GCA 90 bp ACTTTTGCCAAAGTGGTAAGAAAACTGATGGCCATTTGTGAAACATaGATATCACTTTCGCTGATAAGAGGTGGGAGCTCATCTAGAACT +
Preference number: 5 (lower is better)
Translates to: TFAKVVRKLMAICET*ISLSLIRGGSSSRT
Trigger: AGTTCTAGATGAGCTCCCACCTCTTATCAGCGAAAGTGATATGCATGTTTCACAAATGGCCATCAGTTTTCTTACCACTTTGGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS GCA 90 bp CATTCAGCAACAACATTTCTGGTTCCTTCCTCTGCACACTCACAGTaGTTTAGTAATAAGGCCCAGATGTTTTCAACATATGGTTTAAGG +
Preference number: 5 (lower is better)
Translates to: HSATTFLVPSSAHSQ*FSNKAQMFSTYGLR
Trigger: CCTTAAACCATATGTTGAAAACATCTGGGCCTTATTACTAAAGCACTGTGAGTGTGCAGAGGAAGGAACCAGAAATGTTGTTGCTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 90 bp AAATCACCTATGCAGTTCTTTAACAGTGGATCAATAGGTTGTGGATaGTCAGAAATTGTAAATTTCACAGCCGTAACCACTGAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: KSPMQFFNSGSIGCG*SEIVNFTAVTTELR
Trigger: CCGAAGCTCAGTGGTTACGGCTGTGAAATTTACAATTTCTGACCATCCACAACCTATTGATCCACTGTTAAAGAACTGCATAGGTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540319.5
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTTTGACTAGTTATTTCTaGCAGGACAAACGGCAGATA +
Preference number: 5 (lower is better)
Translates to: WVACSQILPLCSTFATKILTSYF*QDKRQI
Trigger: TATCTGCCGTTTGTCCTGCAAGAAATAACTAGTCAA...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTTGGGGTAGCAGTGGTTaGAAAATTAGGATTCAATTT +
Preference number: 5 (lower is better)
Translates to: EITGVSCHLALKYNSLLFWGSSG*KIRIQF
Trigger: AAATTGAATCCTAATTTTCAAACCACTGCTACCCCA...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCATGGGAGTTGGCCCTaGGATTATGCCCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMHGSWP*DYALFI
Trigger: AATGAAGAGGGCATAATCCAAGGGCCAACTCCCATG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp GAGATTACAGGCGTGAGCTGCCATCTGGCCCTGAAGTACAATTCTTTACTATTTGAAGGCCCAAGAATTTaGGAAATTCTGACAAATTTC +
Preference number: 5 (lower is better)
Translates to: EITGVSCHLALKYNSLLFEGPRI*EILTNF
Trigger: GAAATTTGTCAGAATTTCCAAAATTCTTGGGCCTTC...AAATAGTAAAGAATTGTACTTCAGGGCCAGATGGCAGCTCACGCCTGTAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS CCA 90 bp TCAATAAGATCTACAAAAACTATATTTCCACAGCTCATAACCAGATaGCCAAGAGCGATAATGGTTCTTTTCCTCACTGCAAGTCTAGGG +
Preference number: 5 (lower is better)
Translates to: SIRSTKTIFPQLITR*PRAIMVLFLTASLG
Trigger: CCCTAGACTTGCAGTGAGGAAAAGAACCATTATCGCTCTTGGCCATCTGGTTATGAGCTGTGGAAATATAGTTTTTGTAGATCTTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535146.1
ENST00000540319.5
ENST00000545606.6
CDS CCA 90 bp CTCTTCCCTCACTGCATAGGTTGGCATAACTCTAGTCTGCAGTCATaGTACACACAGTATAAAATCTTGCTCCAACATATAAAAATCCTT +
Preference number: 5 (lower is better)
Translates to: LFPHCIGWHNSSLQS*YTQYKILLQHIKIL
Trigger: AAGGATTTTTATATGTTGGAGCAAGATTTTATACTGTGTGTACCATGACTGCAGACTAGAGTTATGCCAACCTATGCAGTGAGGGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539434.1
CDS CCA 90 bp ATCAGGATGCAATATTTTGGTTATCTCTTCCCTCACTGCATAGGTTaGCATAACTCTAGTCTGCAGTCATGGTACACACAGTATAAAATC +
Preference number: 5 (lower is better)
Translates to: IRMQYFGYLFPHCIG*HNSSLQSWYTQYKI
Trigger: GATTTTATACTGTGTGTACCATGACTGCAGACTAGAGTTATGCCAACCTATGCAGTGAGGGAAGAGATAACCAAAATATTGCATCCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539434.1
CDS-3UTR CAA 90 bp GTCTATCAAGACAACTGTCTAGAAGTGTGTACATACACTCAAATGCTGCCTTTCTATTCTATGACCAGCTaGCCTACTAATAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: VYQDNCLEVCTYTQMLPFYSMTS*PTNSSN
Trigger: ATTGCTGCTATTAGTAGGCAAGCTGGTCATAGAATA...GAAAGGCAGCATTTGAGTGTATGTACACACTTCTAGACAGTTGTCTTGATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS-3UTR CAA 90 bp TGGGTAGCCTGTAGCCAAATACTTCCACTGTGTTCCACTTTTGCAACCAAAATTATAAACCTAAAGTCCTaGTCGCTGGATGTCATTTTT +
Preference number: 5 (lower is better)
Translates to: WVACSQILPLCSTFATKIINLKS*SLDVIF
Trigger: AAAAATGACATCCAGCGACAAGGACTTTAGGTTTAT...AATTTTGGTTGCAAAAGTGGAACACAGTGGAAGTATTTGGCTACAGGCTACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTTGGATCCACTTATCTTaGAAAGGGAGGAGGGATATA +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFWIHLS*KGRRDI
Trigger: TATATCCCTCCTCCCTTTCAAAGATAAGTGGATCCA...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTATCACCTGCCACATTTaGAAATGGCACCAACTTCAA +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFITCHI*KWHQLQ
Trigger: TTGAAGTTGGTGCCATTTCAAAATGTGGCAGGTGAT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGGGCCTCCCAGAGTCCTaGTTCTTTATCATATTCTGC +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMGLPES*FFIIFC
Trigger: GCAGAATATGATAAAGAACAAGGACTCTGGGAGGCC...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTAAAGGACCAAGACATTaGACAGCTAAATTCTGTACC +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFKGPRH*TAKFCT
Trigger: GGTACAGAATTTAGCTGTCAAATGTCTTGGTCCTTT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGCCTGACTCTGAAGCATaGTTAAAGGTGTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMPDSEA*LKVFLP
Trigger: AGGGAGAAACACCTTTAACAATGCTTCAGAGTCAGG...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTGTAACCAGATCTAGTTaGTACTTATCCTATGGGCAA +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFVTRSS*YLSYGQ
Trigger: TTGCCCATAGGATAAGTACAAACTAGATCTGGTTAC...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGGAAACTGGAACTACGTaGGCAGTATTCAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWETGTT*AVFSLT
Trigger: TGTCAAACTGAATACTGCCAACGTAGTTCCAGTTTC...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS TCA 90 bp GGAAGCTGGAGGAAGTTCTCCAATTACTGTTTTAAGACCAATACTTaGAATGTCTCGAAGTTGTTCTTTATCAGAAAGCATGTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: GSWRKFSNYCFKTNT*NVSKLFFIRKHVSA
Trigger: TGCACTAACATGCTTTCTGATAAAGAACAACTTCGAGACATTTCAAGTATTGGTCTTAAAACAGTAATTGGAGAACTTCCTCCAGCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539434.1
ENST00000545606.6
CDS TCA 90 bp GTAGTTAACCTGGTAATTTCATTCTTTAGTCTCTCCAAGAAAATCTaGAGTGTATTAGGCAAGTCAGAACCCAAATTGTCTCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: VVNLVISFFSLSKKI*SVLGKSEPKLSPRL
Trigger: CAACCTTGGAGACAATTTGGGTTCTGACTTGCCTAATACACTTCAGATTTTCTTGGAGAGACTAAAGAATGAAATTACCAGGTTAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS TCA 90 bp TCTCACAAGTCCAATAAGTTCATTGAGAATGGATCCACTTATCTTTaGAAGGGAGGAGGGATATACTTTTGCCAAAGTGGTAAGAAAACT +
Preference number: 5 (lower is better)
Translates to: SHKSNKFIENGSTYL*KGGGIYFCQSGKKT
Trigger: AGTTTTCTTACCACTTTGGCAAAAGTATATCCCTCCTCCCTTTCAAAGATAAGTGGATCCATTCTCAATGAACTTATTGGACTTGTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 90 bp CTCTTTCCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATaGTCATATGTAATGGTCCCCATGGTGAACAAACATCTAACTAGT +
Preference number: 5 (lower is better)
Translates to: LFPCLMINLSIQCIV*SYVMVPMVNKHLTS
Trigger: ACTAGTTAGATGTTTGTTCACCATGGGGACCATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGGAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTAAGGTTGCAAATAATTaGTCCCATACAGGAAATAGC +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFKVANN*SHTGNS
Trigger: GCTATTTCCTGTATGGGACAAATTATTTGCAACCTT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTGGATCCACTTATCTTaGAAAGGGAGGAGGGATATA +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMWIHLS*KGRRDI
Trigger: TATATCCCTCCTCCCTTTCAAAGATAAGTGGATCCA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGTTGACTAGTTATTTCTaGCAGGACAAACGGCAGATA +
Preference number: 5 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWLTSYF*QDKRQI
Trigger: TATCTGCCGTTTGTCCTGCAAGAAATAACTAGTCAA...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTAGCCAGTTGAAGTATTaGGATTTAACTTTACCCAAC +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFSQLKY*DLTLPN
Trigger: GTTGGGTAAAGTTAAATCCAAATACTTCAACTGGCT...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp CTGCCTCCTTCAATACATGTAAACTATGTTTGCACAGCATTAGGAGATGTCTTTCATCTCCTTTATGAATaGTTTCTGTCTCACTCATGT +
Preference number: 5 (lower is better)
Translates to: LPPSIHVNYVCTALGDVFHLLYE*FLSHSC
Trigger: ACATGAGTGAGACAGAAACAATTCATAAAGGAGATG...AAAGACATCTCCTAATGCTGTGCAAACATAGTTTACATGTATTGAAGGAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS GCA 90 bp ATCATCACTCCCTTGATCATCATCATCACCACCATCAGCATCCATTaGATTTTCATCTTCATCTTCATCATCGTAATTATAATTTGGATC +
Preference number: 5 (lower is better)
Translates to: IITPLIIIITTISIH*IFIFIFIIVIIIWI
Trigger: GATCCAAATTATAATTACGATGATGAAGATGAAGATGAAAATGCAATGGATGCTGATGGTGGTGATGATGATGATCAAGGGAGTGATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540319.5
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGTACTTTGACAAGCTGTaGAGTAACAAGAAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMYFDKL*SNKKCF
Trigger: GAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGTA...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS-3UTR CAA 90 bp AAAGTAGTGAACACTTACCCAATACAATATGTAAATTCGCTCTACAGGAGATGGAGTCCAATAAGTTCATaGAGAATGGATCCACTTATC +
Preference number: 5 (lower is better)
Translates to: KVVNTYPIQYVNSLYRRWSPISS*RMDPLI
Trigger: GATAAGTGGATCCATTCTCAATGAACTTATTGGACT...CCATCTCCTGTAGAGCGAATTTACATATTGTATTGGGTAAGTGTTCACTACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS-3UTR CAA 90 bp CCATGTCTTATGATTAACCTGTCAATTCAGTGCATTGTATGGTCATATGTAATGAGTCCAATAAGTTCATaGAGAATGGATCCACTTATC +
Preference number: 5 (lower is better)
Translates to: PCLMINLSIQCIVWSYVMSPISS*RMDPLI
Trigger: GATAAGTGGATCCATTCTCAATGAACTTATTGGACT...CATTACATATGACCATACAATGCACTGAATTGACAGGTTAATCATAAGACATGG
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp GGGCCCCAGCGAGCAAGGCGGCCTAGCGCCGCAGGATaGCAAGCGAATAGGCCCGGCGCCCGGTCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: GPQRARRPSAAG*QANRPGARSPG
Trigger: GCCGGGAGACCGGGCGCCGGGCCTATTCGCTTGCCATCCTGCGGCGCTAGGCCGCCTTGCTCGCTGGGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540525.1
CDS CCA 72 bp GGCGCCTCGACGGGCTGCCCCCTCCCTGGCGAGGCGTaGGCCTGTCCCGGGGTAAGCCGAGGCTACAGAGCC +
Preference number: 6 (lower is better)
Translates to: GASTGCPLPGEA*ACPGVSRGYRA
Trigger: GGCTCTGTAGCCTCGGCTTACCCCGGGACAGGCCCACGCCTCGCCAGGGAGGGGGCAGCCCGTCGAGGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS CAA 72 bp GAGAGGAGGCTGCCGGGTCCCCGAGTGGGCAGCAGCTaGGGCCCCAGCGAGCAAGGCGGCCTAGCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: ERRLPGPRVGSS*GPSEQGGLAPQ
Trigger: CTGCGGCGCTAGGCCGCCTTGCTCGCTGGGGCCCAAGCTGCTGCCCACTCGGGGACCCGGCAGCCTCCTCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540525.1
CDS GCA 72 bp CGAGGCGCTCGCCATGTTGACGGCCTCGATCCCGCCTaGTGGCGCTGCTGGAGCTGCTGCCCGCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: RGARHVDGLDPA*WRCWSCCPLPL
Trigger: CAGCGGCAGCGGGCAGCAGCTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS CCA 72 bp CCTAACGACGGCGCTGTTCGCGTGAGAACGAGCTCATaGGCGGCGGGGCGTACAGAAGGGCCTCTACGGGGA +
Preference number: 6 (lower is better)
Translates to: PNDGAVRVRTSS*AAGRTEGPLRG
Trigger: TCCCCGTAGAGGCCCTTCTGTACGCCCCGCCGCCCATGAGCTCGTTCTCACGCGAACAGCGCCGTCGTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS TCA 72 bp GGCTACAGAGCCAGCCTAACGACGGCGCTGTTCGCGTaGGAACGAGCTCATGGGCGGCGGGGCGTACAGAAG +
Preference number: 6 (lower is better)
Translates to: GYRASLTTALFA*ERAHGRRGVQK
Trigger: CTTCTGTACGCCCCGCCGCCCATGAGCTCGTTCTCACGCGAACAGCGCCGTCGTTAGGCTGGCTCTGTAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS TCA 72 bp GCAAATTGGAAATGTGGTACGAGGCGCTCGCCATGTTaGCGGCCTCGATCCCGCCTGCTGGCGCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: ANWKCGTRRSPC*RPRSRLLALLE
Trigger: CTCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCTCGTACCACATTTCCAATTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS CAA 72 bp AGCAAATTGGAAATGTGGTACGAGGCGCTCGCCATGTaGACGGCCTCGATCCCGCCTGCTGGCGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: SKLEMWYEALAM*TASIPPAGAAG
Trigger: TCCAGCAGCGCCAGCAGGCGGGATCGAGGCCGTCAACATGGCGAGCGCCTCGTACCACATTTCCAATTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541058.1
ENST00000545606.6
CDS GCA 72 bp GTTGCACGTAATGGCTCAACAAGTCGGTCCAACCTCTaGAGTACTGCACTTGGACAAAGGGTAGACAGTCTC +
Preference number: 6 (lower is better)
Translates to: VARNGSTSRSNL*STALGQRVDSL
Trigger: GAGACTGTCTACCCTTTGTCCAAGTGCAGTACTGCAGAGGTTGGACCGACTTGTTGAGCCATTACGTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS GCA 72 bp AAACTGACCTACTACAGCTGGTCCCTCTTTAGGGCATaGTCGAGTAAGGGCAGCTACACATTTGGCAATGGA +
Preference number: 6 (lower is better)
Translates to: KLTYYSWSLFRA*SSKGSYTFGNG
Trigger: TCCATTGCCAAATGTGTAGCTGCCCTTACTCGAGCATGCCCTAAAGAGGGACCAGCTGTAGTAGGTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp GTTCTTGACATCTTGAATAAACTGACCTACTACAGCTaGTCCCTCTTTAGGGCATGCTCGAGTAAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VLDILNKLTYYS*SLFRACSSKGS
Trigger: GCTGCCCTTACTCGAGCATGCCCTAAAGAGGGACCAGCTGTAGTAGGTCAGTTTATTCAAGATGTCAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp ATAGCCGCCAGCTCAGGGTTAGAACTGATCTGTGACTaGAATTCACTCATCAGTGGACTCTTCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: IAASSGLELICD*NSLISGLFSAS
Trigger: AGAAGCAGAGAAGAGTCCACTGATGAGTGAATTCCAGTCACAGATCAGTTCTAACCCTGAGCTGGCGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CAA 90 bp GAACCTGACTCTGAAGCATTGTTAAAGGTGTTTCTCCCTGCTCCATaGCATCAGGGTCACATAGCCAACTTTGTACAGGACGAGTTTGCT +
Preference number: 6 (lower is better)
Translates to: EPDSEALLKVFLPAP*HQGHIANFVQDEFA
Trigger: AGCAAACTCGTCCTGTACAAAGTTGGCTATGTGACCCTGATGCAATGGAGCAGGGAGAAACACCTTTAACAATGCTTCAGAGTCAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540319.5
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp GTCAACTGGGGAAGTAGACAGGTCAGAATTGAAGGATaGAAATTAACAAGAAGTCCTCCTTGCCTGCTCAAC +
Preference number: 6 (lower is better)
Translates to: VNWGSRQVRIEG*KLTRSPPCLLN
Trigger: GTTGAGCAGGCAAGGAGGACTTCTTGTTAATTTCCATCCTTCAATTCTGACCTGTCTACTTCCCCAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535146.1
ENST00000540319.5
ENST00000545606.6
CDS CAA 72 bp TCTGAAGCATTGTTAAAGGTGTTTCTCCCTGCTCCATaGCATCAGGGTCACATAGCCAACTTTGTACAGGAC +
Preference number: 6 (lower is better)
Translates to: SEALLKVFLPAP*HQGHIANFVQD
Trigger: GTCCTGTACAAAGTTGGCTATGTGACCCTGATGCAATGGAGCAGGGAGAAACACCTTTAACAATGCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540319.5
ENST00000544619.1
ENST00000545606.6
CDS GCA 72 bp CTTTGGAACCAACAGTACCGATCTCCTGAACAGAACTaGTGTAATAAAGCTTCATATTCACCAGGTCCGTAT +
Preference number: 6 (lower is better)
Translates to: LWNQQYRSPEQN*CNKASYSPGPY
Trigger: ATACGGACCTGGTGAATATGAAGCTTTATTACAGCAGTTCTGTTCAGGAGATCGGTACTGTTGGTTCCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539109.1
CDS GCA 72 bp GAGCTGTGCTCTGAGAGTAAACTGGACCAGTCAGCATaGGCAACAAATCCATGTATCCTAAATTATTTGTTC +
Preference number: 6 (lower is better)
Translates to: ELCSESKLDQSA*ATNPCILNYLF
Trigger: GAACAAATAATTTAGGATACATGGATTTGTTGCGCATGCTGACTGGTCCAGTTTACTCTCAGAGCACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp CAATATTTTGGTTATCTCTTCCCTCACTGCATAGGTTaGCATAACTCTAGTCTGCAGTCATGGTACACACAG +
Preference number: 6 (lower is better)
Translates to: QYFGYLFPHCIG*HNSSLQSWYTQ
Trigger: CTGTGTGTACCATGACTGCAGACTAGAGTTATGCCAACCTATGCAGTGAGGGAAGAGATAACCAAAATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539434.1
CDS CCA 72 bp CTTCTGGAATGGTTAGCAGTGCTGCTACTGCTCTCATaGCAGATCGCTTTAATTCATCTTGTTTTTCAAACT +
Preference number: 6 (lower is better)
Translates to: LLEWLAVLLLLS*QIALIHLVFQT
Trigger: AGTTTGAAAAACAAGATGAATTAAAGCGATCTGCCATGAGAGCAGTAGCAGCACTGCTAACCATTCCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CAA 90 bp ATTAGGCAAGTCAGAACCCAAATTGTCTCCAAGGTTGCAAATAATTaGTCCCATACAGGAAATAGCCCTTTCCTTGACTTCCTGATCAAT +
Preference number: 6 (lower is better)
Translates to: IRQVRTQIVSKVANN*SHTGNSPFLDFLIN
Trigger: ATTGATCAGGAAGTCAAGGAAAGGGCTATTTCCTGTATGGGACAAATTATTTGCAACCTTGGAGACAATTTGGGTTCTGACTTGCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS TCA 72 bp CTCAACATATCAGCCATAATATCCAAGGCTTCTAGCTaGACAGAGACATCTTCCTGTTTTGCTATTGCACTT +
Preference number: 6 (lower is better)
Translates to: LNISAIISKASS*TETSSCFAIAL
Trigger: AAGTGCAATAGCAAAACAGGAAGATGTCTCTGTTCAGCTAGAAGCCTTGGATATTATGGCTGATATGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535146.1
ENST00000540319.5
ENST00000545606.6
CDS TCA 72 bp GCAACAAATCCATGTATCCTAAATTATTTGTTCCAGTaGCAACCAGAGCTTGGAAAAAGTCTAGCATGGCAC +
Preference number: 6 (lower is better)
Translates to: ATNPCILNYLFQ*QPELGKSLAWH
Trigger: GTGCCATGCTAGACTTTTTCCAAGCTCTGGTTGTCACTGGAACAAATAATTTAGGATACATGGATTTGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp TCTACAAAAACTATATTTCCACAGCTCATAACCAGATaGCCAAGAGCGATAATGGTTCTTTTCCTCACTGCA +
Preference number: 6 (lower is better)
Translates to: STKTIFPQLITR*PRAIMVLFLTA
Trigger: TGCAGTGAGGAAAAGAACCATTATCGCTCTTGGCCATCTGGTTATGAGCTGTGGAAATATAGTTTTTGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535146.1
ENST00000540319.5
ENST00000545606.6
CDS CCA 72 bp CACTGCATAGGTTGGCATAACTCTAGTCTGCAGTCATaGTACACACAGTATAAAATCTTGCTCCAACATATA +
Preference number: 6 (lower is better)
Translates to: HCIGWHNSSLQS*YTQYKILLQHI
Trigger: TATATGTTGGAGCAAGATTTTATACTGTGTGTACCATGACTGCAGACTAGAGTTATGCCAACCTATGCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539434.1
CDS CAA 72 bp CTGAGCTTCGGGCATATGATGAGCTTTGACAAGCTGTaGAGTAACAAGAAGTGCTTCAGATGTAATTTTGTA +
Preference number: 6 (lower is better)
Translates to: LSFGHMMSFDKL*SNKKCFRCNFV
Trigger: TACAAAATTACATCTGAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGCTCATCATATGCCCGAAGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS CAA 72 bp TGCAATAAGGGTGATCTCACAAGTCCAATAAGTTCATaGAGAATGGATCCACTTATCTTTGAAAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: CNKGDLTSPISS*RMDPLIFEREE
Trigger: CTCCTCCCTTTCAAAGATAAGTGGATCCATTCTCAATGAACTTATTGGACTTGTGAGATCACCCTTATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544619.1
ENST00000545606.6
CDS CCA 72 bp ATGCAGTTCTTTAACAGTGGATCAATAGGTTGTGGATaGTCAGAAATTGTAAATTTCACAGCCGTAACCACT +
Preference number: 6 (lower is better)
Translates to: MQFFNSGSIGCG*SEIVNFTAVTT
Trigger: AGTGGTTACGGCTGTGAAATTTACAATTTCTGACCATCCACAACCTATTGATCCACTGTTAAAGAACTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540319.5
ENST00000544619.1
ENST00000545606.6
CDS GCA 72 bp CTTTCACTATCATCATCCAACTTGATGGAATCTTTCTaGAGTTCCGTCATCAAATCATTTGTAGCCATAAAC +
Preference number: 6 (lower is better)
Translates to: LSLSSSNLMESF*SSVIKSFVAIN
Trigger: GTTTATGGCTACAAATGATTTGATGACGGAACTGCAGAAAGATTCCATCAAGTTGGATGATGATAGTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539434.1
ENST00000540525.1
ENST00000541058.1
ENST00000545606.6
CDS GCA 72 bp ATGATGAGCTTTGACAAGCTGTTGAGTAACAAGAAGTaGTTCAGATGTAATTTTGTAAAATGGGTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: MMSFDKLLSNKK*FRCNFVKWVSN
Trigger: GTTGGAGACCCATTTTACAAAATTACATCTGAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGCTCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540319.5
CDS CAA 72 bp TATCTTCTCAAGGTATTCACCTATTCTATGACCAGCTaGCCTACTAATAGCAGCAATACATTGTATGTAGGT +
Preference number: 6 (lower is better)
Translates to: YLLKVFTYSMTS*PTNSSNTLYVG
Trigger: ACCTACATACAATGTATTGCTGCTATTAGTAGGCAAGCTGGTCATAGAATAGGTGAATACCTTGAGAAGATA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535146.1
ENST00000540319.5
ENST00000545606.6
CDS CAA 90 bp CATCATCACTCCCTTGATCATCATCATCACCACCATCAGCATCCATaGCATTTTCATCTTCATCTTCATCATCGTAATTATAATTTGGAT +
Preference number: 6 (lower is better)
Translates to: HHHSLDHHHHHHQHP*HFHLHLHHRNYNLD
Trigger: ATCCAAATTATAATTACGATGATGAAGATGAAGATGAAAATGCAATGGATGCTGATGGTGGTGATGATGATGATCAAGGGAGTGATGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540319.5
ENST00000544619.1
ENST00000545606.6
CDS TCA 72 bp CTGGTAATTTCATTCTTTAGTCTCTCCAAGAAAATCTaGAGTGTATTAGGCAAGTCAGAACCCAAATTGTCT +
Preference number: 6 (lower is better)
Translates to: LVISFFSLSKKI*SVLGKSEPKLS
Trigger: AGACAATTTGGGTTCTGACTTGCCTAATACACTTCAGATTTTCTTGGAGAGACTAAAGAATGAAATTACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545606.6
CDS GCA 72 bp ACGAATTACTTTGACAAGCTGTTGAGTAACAAGAAGTaGTTCAGATGTAATTTTGTAAAATGGGTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: TNYFDKLLSNKK*FRCNFVKWVSN
Trigger: GTTGGAGACCCATTTTACAAAATTACATCTGAAGCACTTCTTGTTACTCAACAGCTTGTCAAAGTAATTCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545606.6