RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMTA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000108509

Ensembl transcript IDs: ENST00000348066.8, ENST00000361571.9, ENST00000381311.9, ENST00000414043.7, ENST00000571831.1, ENST00000572192.1, ENST00000572543.5, ENST00000573004.5, ENST00000574606.2, ENST00000574951.5, ENST00000575192.1, ENST00000575580.1, ENST00000576872.1

Found 1103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGAGGAGCTaGGGAGCAGGGGCAGGCAGGGCTCCGGAGGTCACAGCGGAAGAT +
Preference number: 1 (lower is better)
Translates to: KASQEGAESGAGRRS*GAGAGRAPEVTAED
Trigger: ATCTTCCGCTGTGACCTCCGGAGCCCTGCCTGCCCCTGCTCCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR TCA 90 bp AAAGCCCTCTCCCTGTTAAGACTGCACGAGGCGCCCCCAGGGTGGTaGGAAAGGCGGTGGCCAGGTCATGTGGCCAGTCCCGGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: KALSLLRLHEAPPGW*ERRWPGHVASPGWG
Trigger: TCCCCAGCCGGGACTGGCCACATGACCTGGCCACCGCCTTTCTCACCACCCTGGGGGCGCCTCGTGCAGTCTTAACAGGGAGAGGGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGA +
Preference number: 1 (lower is better)
Translates to: AESGGDTVSPETRGA*AAKAVVGTEADTFR
Trigger: TCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 90 bp CCGGCAGGAGGCCCCCGCCGCGCTAGAGAACCACAAGCCCGGCCGTaGAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTC +
Preference number: 1 (lower is better)
Translates to: PAGGPRRAREPQARP*SPPRGALNRFFTIL
Trigger: GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTGTGGTTCTCTAGCGCGGCGGGGGCCTCCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 90 bp GGGCACGACCAGGAGGGACGAGGAGAGGGGTGTGGGAGCAAGGCGTaGGGAGGAGGGAGGAGGCCTACAGAGGGCTCCAACAAAGGTGAA +
Preference number: 1 (lower is better)
Translates to: GHDQEGRGEGCGSKA*GGGRRPTEGSNKGE
Trigger: TTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCTCCCTCCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGTCCCTCCTGGTCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 90 bp GCAGCAGCCAGGTGCAGAAGGCTCATGCCCCGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTGGGATCATG +
Preference number: 1 (lower is better)
Translates to: AAARCRRLMPRKGLP*ARRSGPFQVERGIM
Trigger: CATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 90 bp AAACAGACGCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGA +
Preference number: 1 (lower is better)
Translates to: KQTQTCGVGWGHGQP*NTRGVRSEGSGGNR
Trigger: TCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR TCA 90 bp GGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCGGGTGATGGGGTAAGACAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GLRNAFLCTPPPLRP*GQWPESGDGVRQGQ
Trigger: CTGGCCCTGTCTTACCCCATCACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 90 bp GCCTGTGGAGCCAAGTGCCTGGTGGGCGTCAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGGAGGATAGCAGTGCCTCCTCTTGAA +
Preference number: 1 (lower is better)
Translates to: ACGAKCLVGVKPPAR*SSPVRRRIAVPPLE
Trigger: TTCAAGAGGAGGCACTGCTATCCTCCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp GCAGCGGGCAAGGCGCACATGACCCCGGGAATGAGCCACAGACAATaGCAGACGGCCCAGAGAGTCGGGAATGCTCAGTGCCTGTCGGTT +
Preference number: 1 (lower is better)
Translates to: AAGKAHMTPGMSHRQ*QTAQRVGNAQCLSV
Trigger: AACCGACAGGCACTGAGCATTCCCGACTCTCTGGGCCGTCTGCCATTGTCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 90 bp CTTGCCACTGGTGGATGCAGAGAGAAACTCTGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACCTCGCTCAAAGGGCAGTTCGCTGGG +
Preference number: 1 (lower is better)
Translates to: LATGGCREKLCPGGC*RDSQATSLKGQFAG
Trigger: CCCAGCGAACTGCCCTTTGAGCGAGGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp ACTGCCAAACTCATGGAAGGCCTAGGATCAGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCTCCAGCCCGCTGCTCCAGTCCTGTC +
Preference number: 1 (lower is better)
Translates to: TAKLMEGLGSACGAK*LVGVKPPARCSSPV
Trigger: GACAGGACTGGAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAGTTTGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp CGGCAGCGCCGCAGGAATCTCATGATCTTCCGGGCTGCCTGGTCCTaGTTCTTGGTGAGAAAGGAGCCTTTGTTGCGGGCAGGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: RQRRRNLMIFRAAWS*FLVRKEPLLRAGRV
Trigger: CACCCTGCCTGCCCGCAACAAAGGCTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGCGCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp GCCTACAACCACTGCCAAACTCATGGAAGGCCTAGGATCAGCCTGTaGAGCCAAGTGCCTGGTGGGCGTCAAGCCTCCAGCCCGCTGCTC +
Preference number: 1 (lower is better)
Translates to: AYNHCQTHGRPRISL*SQVPGGRQASSPLL
Trigger: GAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTaGAGCCGGCAGGAGGCCCCCGCCGCGCTAGAGAACCACAAGCCC +
Preference number: 1 (lower is better)
Translates to: GNSYKPSPCTSRKCP*SRQEAPAALENHKP
Trigger: GGGCTTGTGGTTCTCTAGCGCGGCGGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 90 bp GGCACCTGCCCAGCTGCTGCGATCTCTGCCATCCGCTTCTCCATCTaGTCCAGTCGCTCTAGTATGGACATCCGGAACTGGTTGTCGTCC +
Preference number: 1 (lower is better)
Translates to: GTCPAAAISAIRFSI*SSRSSMDIRNWLSS
Trigger: GGACGACAACCAGTTCCGGATGTCCATACTAGAGCGACTGGAGCAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCTGGGCAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp CCAGGTGGAGCGTGGGATCATGCTTTCTACCAAGACCACTACCCGTaGTTCGAACCCAGGCCCCTGGCCTTCATCCTGAACTGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: PGGAWDHAFYQDHYP*FEPRPLAFILNWRS
Trigger: GCTCCTCCAGTTCAGGATGAAGGCCAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp CATGGGCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTGGGATCATaGTTTCTACCAAGACCACTACCCGTGCTTCGAACCCAGGCCCCT +
Preference number: 1 (lower is better)
Translates to: HGPDVQDPSRWSVGS*FLPRPLPVLRTQAP
Trigger: AGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp CATCCTGTGTCGGCAGCGCCGCAGGAATCTCATGATCTTCCGGGCTaGCTGGTCCTGCTTCTTGGTGAGAAAGGAGCCTTTGTTGCGGGC +
Preference number: 1 (lower is better)
Translates to: HPVSAAPQESHDLPG*LVLLLGEKGAFVAG
Trigger: GCCCGCAACAAAGGCTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGCGCTGCCGACACAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp ACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAAT +
Preference number: 1 (lower is better)
Translates to: TRSALKHEGRAQRRQ*WEPRRIHSETRRTN
Trigger: ATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 90 bp GGGGCTTCCATGGGCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTaGGATCATGCTTTCTACCAAGACCACTACCCGTGCTTCGAACCC +
Preference number: 1 (lower is better)
Translates to: GASMGQTFRTLPGGA*DHAFYQDHYPCFEP
Trigger: GGGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCATGGAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp CCCGGAAGGGGCTTCCATGGGCCAGACGTTCAGGACCCTTCCAGGTaGAGCGTGGGATCATGCTTTCTACCAAGACCACTACCCGTGCTT +
Preference number: 1 (lower is better)
Translates to: PGRGFHGPDVQDPSR*SVGSCFLPRPLPVL
Trigger: AAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp ACTGGGAGGAGCTGGTGGGGCAGAAGGCTCAGTGCCTACAACCACTaGCAAACTCATGGAAGGCCTAGGATCAGCCTGTGGAGCCAAGTG +
Preference number: 1 (lower is better)
Translates to: TGRSWWGRRLSAYNH*QTHGRPRISLWSQV
Trigger: CACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp AGCCACAGACAATGGCAGACGGCCCAGAGAGTCGGGAATGCTCAGTaGCTGTCGGTTCCAACGGAAAAGGAGCACAGCAGCTTCCAGGTG +
Preference number: 1 (lower is better)
Translates to: SHRQWQTAQRVGNAQ*LSVPTEKEHSSFQV
Trigger: CACCTGGAAGCTGCTGTGCTCCTTTTCCGTTGGAACCGACAGGCACTGAGCATTCCCGACTCTCTGGGCCGTCTGCCATTGTCTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAA +
Preference number: 1 (lower is better)
Translates to: RSALKHEGRAQRRQW*EPRRIHSETRRTNK
Trigger: TTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 90 bp GGGAATGAGCCACAGACAATGGCAGACGGCCCAGAGAGTCGGGAATaGTCAGTGCCTGTCGGTTCCAACGGAAAAGGAGCACAGCAGCTT +
Preference number: 1 (lower is better)
Translates to: GNEPQTMADGPESRE*SVPVGSNGKGAQQL
Trigger: AAGCTGCTGTGCTCCTTTTCCGTTGGAACCGACAGGCACTGAGCATTCCCGACTCTCTGGGCCGTCTGCCATTGTCTGTGGCTCATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 90 bp CACTCTGGGGAGAAGTCTGTGATGGTGCTAAGAGCAGGAGACAGCTaGGGGGTCGGAGCAGGGATGCTTGGAGCTTCGTCACTGATGAGT +
Preference number: 1 (lower is better)
Translates to: HSGEKSVMVLRAGDS*GVGAGMLGASSLMS
Trigger: ACTCATCAGTGACGAAGCTCCAAGCATCCCTGCTCCGACCCCCCAGCTGTCTCCTGCTCTTAGCACCATCACAGACTTCTCCCCAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp GCGTGGGTTCGGGGAGCAGGCTTGGTTGGGTGGGTGTCCAAAATCTaGTGCACCAGGTGTTCTACAGAGAACTCTTCTGTTCCATTCCCG +
Preference number: 1 (lower is better)
Translates to: AWVRGAGLVGWVSKI*CTRCSTENSSVPFP
Trigger: CGGGAATGGAACAGAAGAGTTCTCTGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR GCA 90 bp TGCAAACTGCTTGTACTTCCGGTAACAGCGCTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTTCAGCCGCCGGCCCTTGTACTTTCG +
Preference number: 1 (lower is better)
Translates to: CKLLVLPVTALDYSC*YLLLLLQPPALVLS
Trigger: CGAAAGTACAAGGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGCTGTTACCGGAAGTACAAGCAGTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp GAGTGCAAACTGCTTGTACTTCCGGTAACAGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTCCTTCAGCCGCCGGCCCTTGTACTT +
Preference number: 1 (lower is better)
Translates to: ECKLLVLPVTALDYS*CYLLLLLQPPALVL
Trigger: AAGTACAAGGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGCTGTTACCGGAAGTACAAGCAGTTTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 90 bp GGGCACAAGCCCACATCAGAGGGGTGCAAGAGAAATGATCCACGTTaGGCGGGTCAACCTCCTGCTCTAAGTCCAAGCTTCCAGTCTCCA +
Preference number: 1 (lower is better)
Translates to: GHKPTSEGCKRNDPR*AGQPPALSPSFQSP
Trigger: TGGAGACTGGAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCTCAACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGGCTTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp TGGGTTCGGGGAGCAGGCTTGGTTGGGTGGGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAGAACTCTTCTGTTCCATTCCCGCAG +
Preference number: 1 (lower is better)
Translates to: WVRGAGLVGWVSKIC*TRCSTENSSVPFPQ
Trigger: CTGCGGGAATGGAACAGAAGAGTTCTCTGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR CCA 90 bp GTTGAGAAAACGATCAGGGTCAAAGGCAGGACTGGGAGGAGCTGGTaGGGCAGAAGGCTCAGTGCCTACAACCACTGCCAAACTCATGGA +
Preference number: 1 (lower is better)
Translates to: VEKTIRVKGRTGRSW*GRRLSAYNHCQTHG
Trigger: TCCATGAGTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGTCCTGCCTTTGACCCTGATCGTTTTCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 90 bp ACGAAGTCCTCTCGTTTAATCCGCTCCGGTGTGGCTTCGATGATCTaGTTGGCTAGTGAGATCATGTCCACCGGGATCACATCCACAGCC +
Preference number: 1 (lower is better)
Translates to: TKSSRLIRSGVASMI*LASEIMSTGITSTA
Trigger: GGCTGTGGATGTGATCCCGGTGGACATGATCTCACTAGCCAAGCAGATCATCGAAGCCACACCGGAGCGGATTAAACGAGAGGACTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 90 bp ATGGACATCCGGAACTGGTTGTCGTCCAGTGACAGCCAGTCAAGTTaGGTACTAGGCAGAGACAGGAATCGGCGGGCTCGATACTCAAAG +
Preference number: 1 (lower is better)
Translates to: MDIRNWLSSSDSQSS*VLGRDRNRRARYSK
Trigger: CTTTGAGTATCGAGCCCGCCGATTCCTGTCTCTGCCTAGTACTCAACTTGACTGGCTGTCACTGGACGACAACCAGTTCCGGATGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 2 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GADSATRSYVHHLPFGPEGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 2 (lower is better)
Translates to: GADSATRSYVHHLPFGPEGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: ACAAKAVVGTEADTFRDADRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: DGADSATRSYVHHLPFGPTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGTGGCCAGAGTCGGGTaGTGGGGTAAGACAGGGCCA +
Preference number: 2 (lower is better)
Translates to: DGADSATRSYVHHLPFGPVARVG*WGKTGP
Trigger: TGGCCCTGTCTTACCCCATCACCCGACTCTGGCCAC...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: DGADSATRSYVHHLPFGPETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp ATTGAGGCTCCAGCCTCGGGCAGCCCCACGAAGTCCTCTCGTTTAATCCGCTCCCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 2 (lower is better)
Translates to: IEAPASGSPTKSSRLIRSPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...GGAGCGGATTAAACGAGAGGACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: ARPCSPPRGALNRFFTILDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp CTCCTTCAGCCGCCGGCCCTTGTACTTTCGGAAGGCCGTCTGGATGACTCGGGCGGGAGGTGTGTGCCTTaGGGAGCTCTGGGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LLQPPALVLSEGRLDDSGGRCVP*GALGEV
Trigger: CACTTCCCCCAGAGCTCCCCAAGGCACACACCTCCC...GCCCGAGTCATCCAGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 2 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATAGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 2 (lower is better)
Translates to: QARPCSPPRGALNRFFTIGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp CAAGGCAGCGGGCAAGGCGCACATGACCCCGGGAATGAGCCACAGACAATGGCAGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATA +
Preference number: 2 (lower is better)
Translates to: QGSGQGAHDPGNEPQTMAAQRRQ*WEPRRI
Trigger: TATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC...TGCCATTGTCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 2 (lower is better)
Translates to: DGADSATRSYVHHLPFGPGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAGCCCCGTGACCCTTaGGCTCCTCCCCACTGTCAT +
Preference number: 2 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEQPRDP*APPHCH
Trigger: ATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTG...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGTGTCCGCTCCCGCATTaGGGCTCCAGCCTCGGGCAG +
Preference number: 2 (lower is better)
Translates to: VEQINKASQEGAESGAGRCPLPH*GSSLGQ
Trigger: CTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACA...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp ATTGAGGCTCCAGCCTCGGGCAGCCCCACGAAGTCCTCTCGTTTAATCCGCTCCGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: IEAPASGSPTKSSRLIRSETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...GGAGCGGATTAAACGAGAGGACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATA +
Preference number: 2 (lower is better)
Translates to: ARPCSPPRGALNRFFTILAQRRQ*WEPRRI
Trigger: TATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp CAAGGCAGCGGGCAAGGCGCACATGACCCCGGGAATGAGCCACAGACAATGGCACTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 2 (lower is better)
Translates to: QGSGQGAHDPGNEPQTMALDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...TGCCATTGTCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGCTCCACTTGATGCCATaGAACATGGGCTTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPLHLMP*NMGFSC
Trigger: ACAGCTGAAGCCCATGTTTCATGGCATCAAGTGGAG...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR GCA 90 bp CTCCTTCAGCCGCCGGCCCTTGTACTTTCGGAAGGCCGTCTGGATGACTCGGGCGGGCAGAAGGCTCAGTaGCTACAACCACTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: LLQPPALVLSEGRLDDSGGQKAQ*LQPLPN
Trigger: GTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCC...GCCCGAGTCATCCAGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp ATCCGACAGCTCCGAGGGCGAGGAGACGCTGCTCAGACCAGTGTCTGGGCTGGAGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: IRQLRGRGDAAQTSVWAGEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...TCCAGCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCTCGGAGCTGTCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp GCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTGGGATCATGCTTTCTACCAAGGAGCCAAGTGCCTGGTaGGCGTCAAGCCTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: ARRSGPFQVERGIMLSTKEPSAW*ASSLQP
Trigger: GGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTC...CTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 2 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp CAGTTCACTGGCCCCAACAGGTCCTCCAAACAAGGCCTCTCCTCTTCCTACCCTGTGGCCAGAGTCGGGTaGTGGGGTAAGACAGGGCCA +
Preference number: 2 (lower is better)
Translates to: QFTGPNRSSKQGLSSSYPVARVG*WGKTGP
Trigger: TGGCCCTGTCTTACCCCATCACCCGACTCTGGCCAC...AGGGTAGGAAGAGGAGAGGCCTTGTTTGGAGGACCTGTTGGGGCCAGTGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAG +
Preference number: 2 (lower is better)
Translates to: PETRGACAAKAVVGTEADVSKIC*TRCSTE
Trigger: CTCTGTAGAACACCTGGTGCAGCAGATTTTGGACAC...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: QRVPMYTTSPSALRSVAREDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp ATTGAGGCTCCAGCCTCGGGCAGCCCCACGAAGTCCTCTCGTTTAATCCGCTCCGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: IEAPASGSPTKSSRLIRSAGLVG*VSKICC
Trigger: GCAGCAGATTTTGGACACCCACCCAACCAAGCCTGC...GGAGCGGATTAAACGAGAGGACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATAGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: QARPCSPPRGALNRFFTIEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGTGCTGCTGCATTTGTaGGTAAGGCTCCCAGAACCA +
Preference number: 2 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEVLLHL*VRLPEP
Trigger: TGGTTCTGGGAGCCTTACCCACAAATGCAGCAGCAC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 2 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp ACTGCCAAACTCATGGAAGGCCTAGGATCAGCCTGTGGAGCCAAGTGCCTGGTGAGCAGTGCCTCCTCTTaGAGAACCCCCTCGAGAAGT +
Preference number: 2 (lower is better)
Translates to: TAKLMEGLGSACGAKCLVSSASS*RTPSRS
Trigger: ACTTCTCGAGGGGGTTCTTCAAGAGGAGGCACTGCT...CACCAGGCACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAGTTTGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR GCA 90 bp CTACCTCCTGCTGCTCCTTCAGCCGCCGGCCCTTGTACTTTCGGAAGGCCGTCTTGGGTGTCCAAAATCTaGTGCACCAGGTGTTCTACA +
Preference number: 2 (lower is better)
Translates to: LPPAAPSAAGPCTFGRPSWVSKI*CTRCST
Trigger: TGTAGAACACCTGGTGCAGCAGATTTTGGACACCCA...AGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: VEQINKASQEGAESGAGREDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 2 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp AGATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 2 (lower is better)
Translates to: RFFTILCMLQYVQDPSPRGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...CCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGTGGCCAGAGTCGGGTaGTGGGGTAAGACAGGGCCA +
Preference number: 2 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGVARVG*WGKTGP
Trigger: TGGCCCTGTCTTACCCCATCACCCGACTCTGGCCAC...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp CAGCGATGTTTAATGGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: QRCLMAIRINQAHAQVESGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...ACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCCATTAAACATCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp ATGCGGTGTTTCGTGCTGCTGCATTTGTGGGTAAGGCTCCCAGAACCAAGCCCCAACAAAAGATGGGGCTaGAGCCCTTTCCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: MRCFVLLHLWVRLPEPSPNKRWG*SPFHSP
Trigger: AGGACTGTGGAAAGGGCTGCAGCCCCATCTTTTGTT...GGGGCTTGGTTCTGGGAGCCTTACCCACAAATGCAGCAGCACGAAACACCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp ATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ILHYTLYVTVCTRPLPSGTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...CCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CAA 90 bp AAGTCCTCTCGTTTAATCCGCTCCGGTGTGGCTTCGATGATCTGCTaGGCTAGTGAGATCATGTCCACCGGGATCACATCCACAGCCTGT +
Preference number: 2 (lower is better)
Translates to: KSSRLIRSGVASMIC*ASEIMSTGITSTAC
Trigger: ACAGGCTGTGGATGTGATCCCGGTGGACATGATCTCACTAGCCAAGCAGATCATCGAAGCCACACCGGAGCGGATTAAACGAGAGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp AGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAAGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 2 (lower is better)
Translates to: RQWWEPRRIHSETRRTNKGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...TTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp GCAGCGATGTTTAATGGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 2 (lower is better)
Translates to: AAMFNGNSYKPSPCTSRKGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...CTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCCATTAAACATCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp ATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGTCACAGCGGAAGATaGAGGTATGTGGGGCGCGGG +
Preference number: 2 (lower is better)
Translates to: ILHYTLYVTVCTRPLPSGGHSGR*RYVGRG
Trigger: CCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC...CCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp GAGCAGGCTTGGTTGGGTGGGTGTCCAAAATCTGCTGCACCAGGTGTTCTACAGAACAAAAGATGGGGCTaGAGCCCTTTCCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: EQAWLGGCPKSAAPGVLQNKRWG*SPFHSP
Trigger: AGGACTGTGGAAAGGGCTGCAGCCCCATCTTTTGTT...CTGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp ATAGATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: IDSSLYSVCYSMYKTPPLDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...GAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAATCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 2 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp GGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 2 (lower is better)
Translates to: GYIQRRVEQINKASQEGAGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...GGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CCA 90 bp GATGGCCGCCTGGGTCATCTTCTTATAGAGTGCAAACTGCTTGTACTTCCGGTAATGAGCCACAGACAATaGCAGACGGCCCAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: DGRLGHLLIECKLLVLPVMSHRQ*QTAQRV
Trigger: GACTCTCTGGGCCGTCTGCCATTGTCTGTGGCTCAT...TACCGGAAGTACAAGCAGTTTGCACTCTATAAGAAGATGACCCAGGCGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR TCA 90 bp CGATGTTTAATGGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCGTGGCCAGAGTCGGGTaGTGGGGTAAGACAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RCLMAIRINQAHAQVESAVARVG*WGKTGP
Trigger: TGGCCCTGTCTTACCCCATCACCCGACTCTGGCCAC...GGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCCATTAAACATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR TCA 90 bp AGATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 2 (lower is better)
Translates to: RFFTILCMLQYVQDPSPRGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...CCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR GCA 90 bp TTAAATAGATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LNRFFTILCMLQYVQDPSDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...GGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAATCTATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp CAGCGATGTTTAATGGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 2 (lower is better)
Translates to: QRCLMAIRINQAHAQVESQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...ACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCCATTAAACATCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CCA 90 bp TTAAATAGATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATA +
Preference number: 2 (lower is better)
Translates to: LNRFFTILCMLQYVQDPSAQRRQ*WEPRRI
Trigger: TATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC...GGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAATCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 72 bp CAGGAGGGGGCCGAGTCGGGTGCAGGCAGGAGGAGCTaGGGAGCAGGGGCAGGCAGGGCTCCGGAGGTCACA +
Preference number: 3 (lower is better)
Translates to: QEGAESGAGRRS*GAGAGRAPEVT
Trigger: TGTGACCTCCGGAGCCCTGCCTGCCCCTGCTCCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCCTCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 72 bp GGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGAT +
Preference number: 3 (lower is better)
Translates to: GGDTVSPETRGA*AAKAVVGTEAD
Trigger: ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 72 bp GGCCCCCGCCGCGCTAGAGAACCACAAGCCCGGCCGTaGAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTC +
Preference number: 3 (lower is better)
Translates to: GPRRAREPQARP*SPPRGALNRFF
Trigger: GAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTGTGGTTCTCTAGCGCGGCGGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 72 bp CCCCAGGGTGGTGAGAAAGGCGGTGGCCAGGTCATGTaGCCAGTCCCGGCTGGGGAAGCCCTTCCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: PQGGEKGGGQVM*PVPAGEALPAP
Trigger: AGGAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCACATGACCTGGCCACCGCCTTTCTCACCACCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 72 bp CAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGT +
Preference number: 3 (lower is better)
Translates to: QTCGVGWGHGQP*NTRGVRSEGSG
Trigger: ACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR TCA 72 bp TCCCTGTTAAGACTGCACGAGGCGCCCCCAGGGTGGTaGGAAAGGCGGTGGCCAGGTCATGTGGCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: SLLRLHEAPPGW*ERRWPGHVASP
Trigger: GGGACTGGCCACATGACCTGGCCACCGCCTTTCTCACCACCCTGGGGGCGCCTCGTGCAGTCTTAACAGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp GCCAAGTGCCTGGTGGGCGTCAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGGAGGATAGCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: AKCLVGVKPPAR*SSPVRRRIAVP
Trigger: AGGCACTGCTATCCTCCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp CTCATGGAAGGCCTAGGATCAGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCTCCAGCCCGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LMEGLGSACGAK*LVGVKPPARCS
Trigger: GGAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp CAGGTCCTCCAAACAAGGCCTCTCCTCTTCCTACCCTaGTTGACGGCTCCAAGGGGGCAGGTGAGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: QVLQTRPLLFLP*LTAPRGQVRVG
Trigger: CCCCACCCTCACCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGAGGAGAGGCCTTGTTTGGAGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp GCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATACATTCAGAGACGCGT +
Preference number: 3 (lower is better)
Translates to: ALKHEGRAQRRQ*WEPRRIHSETR
Trigger: ACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 72 bp AGGTGCAGAAGGCTCATGCCCCGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCCTTCCAGGTGGAGCGT +
Preference number: 3 (lower is better)
Translates to: RCRRLMPRKGLP*ARRSGPFQVER
Trigger: ACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 72 bp GGTGGATGCAGAGAGAAACTCTGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACCTCGCTCAAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: GGCREKLCPGGC*RDSQATSLKGQ
Trigger: CTGCCCTTTGAGCGAGGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCAGAGTTTCTCTCTGCATCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp CTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACATTCAGAGACGCGTCGA +
Preference number: 3 (lower is better)
Translates to: LKHEGRAQRRQW*EPRRIHSETRR
Trigger: TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR-3UTR CAA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAGGGGAGCAGGCTTGGTaGGGTGGGTGTCCAAAATCT +
Preference number: 3 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRGEQAW*GGCPKS
Trigger: AGATTTTGGACACCCACCCAACCAAGCCTGCTCCCC...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp CTGCTTGTACTTCCGGTAACAGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTCCTTCAGCCGCCGGCC +
Preference number: 3 (lower is better)
Translates to: LLVLPVTALDYS*CYLLLLLQPPA
Trigger: GGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGCTGTTACCGGAAGTACAAGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp AGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAGCCAGGACCAAAAGAG +
Preference number: 3 (lower is better)
Translates to: RAPEVTAEDAGM*GAGFLEPGPKE
Trigger: CTCTTTTGGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 72 bp TATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTaGAGCCGGCAGGAGGCCCCCGCCGCGCTAGAGAAC +
Preference number: 3 (lower is better)
Translates to: YKPSPCTSRKCP*SRQEAPAALEN
Trigger: GTTCTCTAGCGCGGCGGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR CCA 72 bp GCAGAGACAGGCGTGGGTTCGGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTGCTGCACCAGGTGTTC +
Preference number: 3 (lower is better)
Translates to: AETGVGSGSRLG*VGVQNLLHQVF
Trigger: GAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR CCA 72 bp CACTGCCAAACTCATGGAAGGCCTAGGATCAGCCTGTaGAGCCAAGTGCCTGGTGGGCGTCAAGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: HCQTHGRPRISL*SQVPGGRQASS
Trigger: GCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAGTTTGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CAA 90 bp ATCCGACAGCTCCGAGGGCGAGGAGACGCTGCTCAGACCAGTGTCTGGGCTGGATTCGTGCTGCTGCATTaGTGGGTAAGGCTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: IRQLRGRGDAAQTSVWAGFVLLH*WVRLPE
Trigger: TTCTGGGAGCCTTACCCACAAATGCAGCAGCACGAA...TCCAGCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCTCGGAGCTGTCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 72 bp AACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCGGGTGATGGGGTAAGA +
Preference number: 3 (lower is better)
Translates to: NAFLCTPPPLRP*GQWPESGDGVR
Trigger: TCTTACCCCATCACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
3UTR GCA 72 bp CTTGTACTTCCGGTAACAGCGCTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTTCAGCCGCCGGCCCTT +
Preference number: 3 (lower is better)
Translates to: LVLPVTALDYSC*YLLLLLQPPAL
Trigger: AAGGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGCTGTTACCGGAAGTACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CAA 90 bp AGACAGGAATCGGCGGGCTCGATACTCAAAGAGCACAGAAGCAGAAAGGGGCCCGTTCGGGGAGCAGGCTaGGTTGGGTGGGTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: RQESAGSILKEHRSRKGPVRGAG*VGWVSK
Trigger: TTTGGACACCCACCCAACCAAGCCTGCTCCCCGAAC...GGGCCCCTTTCTGCTTCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 72 bp CAGTCCTGTCAGGAGGAGGATAGCAGTGCCTCCTCTTaGAGAACCCCCTCGAGAAGTGGGAGGGCTAGGTCT +
Preference number: 3 (lower is better)
Translates to: QSCQEEDSSASS*RTPSRSGRARS
Trigger: AGACCTAGCCCTCCCACTTCTCGAGGGGGTTCTTCAAGAGGAGGCACTGCTATCCTCCTCCTGACAGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp GCGTGGGATCATGCTTTCTACCAAGACCACTACCCGTaGTTCGAACCCAGGCCCCTGGCCTTCATCCTGAAC +
Preference number: 3 (lower is better)
Translates to: AWDHAFYQDHYP*FEPRPLAFILN
Trigger: GTTCAGGATGAAGGCCAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp CCACAGACAATGGCAGACGGCCCAGAGAGTCGGGAATaGTCAGTGCCTGTCGGTTCCAACGGAAAAGGAGCA +
Preference number: 3 (lower is better)
Translates to: PQTMADGPESRE*SVPVGSNGKGA
Trigger: TGCTCCTTTTCCGTTGGAACCGACAGGCACTGAGCATTCCCGACTCTCTGGGCCGTCTGCCATTGTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp TCGGCAGCGCCGCAGGAATCTCATGATCTTCCGGGCTaGCTGGTCCTGCTTCTTGGTGAGAAAGGAGCCTTT +
Preference number: 3 (lower is better)
Translates to: SAAPQESHDLPG*LVLLLGEKGAF
Trigger: AAAGGCTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGCGCTGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp AGACAGGCGTGGGTTCGGGGAGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGCACCAGGTGTTCTACA +
Preference number: 3 (lower is better)
Translates to: RQAWVRGAGLVG*VSKICCTRCST
Trigger: TGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCACGCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR CCA 72 bp GAGAAGTCTGTGATGGTGCTAAGAGCAGGAGACAGCTaGGGGGTCGGAGCAGGGATGCTTGGAGCTTCGTCA +
Preference number: 3 (lower is better)
Translates to: EKSVMVLRAGDS*GVGAGMLGASS
Trigger: TGACGAAGCTCCAAGCATCCCTGCTCCGACCCCCCAGCTGTCTCCTGCTCTTAGCACCATCACAGACTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp GAGCACCTTGACCCCACCCTCTGGGTAGGACCACTCTaGGGAGAAGTCTGTGATGGTGCTAAGAGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: EHLDPTLWVGPL*GEVCDGAKSRR
Trigger: TCTCCTGCTCTTAGCACCATCACAGACTTCTCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp ATGGGCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTaGGATCATGCTTTCTACCAAGACCACTACCCGTGC +
Preference number: 3 (lower is better)
Translates to: MGQTFRTLPGGA*DHAFYQDHYPC
Trigger: GCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CAA 90 bp ATGATGCGGTGTTTCGTGCTGCTGCATTTGTGGGTAAGGCTCCCAGAACCAAGCGTTCGGGGAGCAGGCTaGGTTGGGTGGGTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: MMRCFVLLHLWVRLPEPSVRGAG*VGWVSK
Trigger: TTTGGACACCCACCCAACCAAGCCTGCTCCCCGAAC...GCTTGGTTCTGGGAGCCTTACCCACAAATGCAGCAGCACGAAACACCGCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR GCA 72 bp GACGTTCAGGACCCTTCCAGGTGGAGCGTGGGATCATaGTTTCTACCAAGACCACTACCCGTGCTTCGAACC +
Preference number: 3 (lower is better)
Translates to: DVQDPSRWSVGS*FLPRPLPVLRT
Trigger: GGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp CGCAGGAATCTCATGATCTTCCGGGCTGCCTGGTCCTaGTTCTTGGTGAGAAAGGAGCCTTTGTTGCGGGCA +
Preference number: 3 (lower is better)
Translates to: RRNLMIFRAAWS*FLVRKEPLLRA
Trigger: TGCCCGCAACAAAGGCTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATGAGATTCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CCA 72 bp GGCTTCCATGGGCCAGACGTTCAGGACCCTTCCAGGTaGAGCGTGGGATCATGCTTTCTACCAAGACCACTA +
Preference number: 3 (lower is better)
Translates to: GFHGPDVQDPSR*SVGSCFLPRPL
Trigger: TAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGCCCATGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 72 bp AGGGCACAAGCCCACATCAGAGGGGTGCAAGAGAAATaGTCCACGTTGAGCGGGTCAACCTCCTGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: RAQAHIRGVQEK*STLSGSTSCSK
Trigger: CTTAGAGCAGGAGGTTGACCCGCTCAACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGGCTTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR TCA 72 bp CCCACATCAGAGGGGTGCAAGAGAAATGATCCACGTTaGGCGGGTCAACCTCCTGCTCTAAGTCCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: PTSEGCKRNDPR*AGQPPALSPSF
Trigger: GAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCTCAACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp CGGGGAGCAGGCTTGGTTGGGTGGGTGTCCAAAATCTaGTGCACCAGGTGTTCTACAGAGAACTCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: RGAGLVGWVSKI*CTRCSTENSSV
Trigger: AACAGAAGAGTTCTCTGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR CCA 72 bp GTGTCAGCAGGGCAAAATCACTTTCCATCTTGCCACTaGTGGATGCAGAGAGAAACTCTGCCCAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: VSAGQNHFPSCH*WMQRETLPRRV
Trigger: CACCCTCCTGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAGATGGAAAGTGATTTTGCCCTGCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR-3UTR CAA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGCCCACTGTCATCATCTaGGATGAAGAAGCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: VEQINKASQEGAESGAGRPTVII*DEEAVS
Trigger: GGAAACTGCTTCTTCATCCAAGATGATGACAGTGGG...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR GCA 72 bp GGAGCAGGCTTGGTTGGGTGGGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAGAACTCTTCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: GAGLVGWVSKIC*TRCSTENSSVP
Trigger: TGGAACAGAAGAGTTCTCTGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
3UTR GCA 72 bp TCTCGTTTAATCCGCTCCGGTGTGGCTTCGATGATCTaGTTGGCTAGTGAGATCATGTCCACCGGGATCACA +
Preference number: 3 (lower is better)
Translates to: SRLIRSGVASMI*LASEIMSTGIT
Trigger: TGTGATCCCGGTGGACATGATCTCACTAGCCAAGCAGATCATCGAAGCCACACCGGAGCGGATTAAACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGGGGACCCCGAGCAGCTaGCTGGGGCTCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQGTPSS*LGLQGS
Trigger: GCTGCCCTGGAGCCCCAGGCAGCTGCTCGGGGTCCC...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGTGTCCGCTCCCGCATTaGGGCTCCAGCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAACPLPH*GSSLGQ
Trigger: CTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACA...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGGGACCCCGAGCAGCTaGCTGGGGCTCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRGTPSS*LGLQGS
Trigger: GCTGCCCTGGAGCCCCAGGCAGCTGCTCGGGGTCCC...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGGGGACCCCGAGCAGCTaGCTGGGGCTCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRGTPSS*LGLQGS
Trigger: GCTGCCCTGGAGCCCCAGGCAGCTGCTCGGGGTCCC...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGGGAGGGCCGGGCCTaGGGCGGTAGGAGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEGEGRA*GGRSGS
Trigger: ACTACCGCTCCTACCGCCGCAGGCCCGGCCCTCCCC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCTCCGCGGGCACGCGGTaGGCGAGGGACAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSASAGTR*ARDSAG
Trigger: ACCTGCACTGTCCCTCGCCCACCGCGTGCCCGCGGA...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR TCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGCAGAACAGGGGGTATaGGCGGCCTCTGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWAEQGV*AASASG
Trigger: CCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGC...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGGCTCAGGGTCTCGATaGGGCGGGCATAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWGSGSR*GGHSPG
Trigger: CCCAGGGCTATGCCCGCCTCATCGAGACCCTGAGCC...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGGGCTCAGGGTCTCGATaGGGCGGGCATAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPGSGSR*GGHSPG
Trigger: CCCAGGGCTATGCCCGCCTCATCGAGACCCTGAGCC...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCATGTCCGCTCCCGCATTaGGGCTCCAGCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKACPLPH*GSSLGQ
Trigger: CTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACA...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCTGTCCGCTCCCGCATTaGGGCTCCAGCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSACPLPH*GSSLGQ
Trigger: CTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACA...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCATGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACC +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKACPGGC*RDSQAT
Trigger: GGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCA...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACC +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPCPGGC*RDSQAT
Trigger: GGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCA...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAAKPPAR*SSPVRR
Trigger: CCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTT...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGGGACCCCGAGCAGCTaGCTGGGGCTCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFGTPSS*LGLQGS
Trigger: GCTGCCCTGGAGCCCCAGGCAGCTGCTCGGGGTCCC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGGGGAGGGCCGGGCCTaGGGCGGTAGGAGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRGEGRA*GGRSGS
Trigger: ACTACCGCTCCTACCGCCGCAGGCCCGGCCCTCCCC...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSADRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAAETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCAGTGGAGGAGGCTCTaGGGGGTGAGCGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQQWRRL*GVSVGD
Trigger: ATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTG...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGCCAGTCCCGGCTaGGGAAGCCCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAVASPG*GSPSSS
Trigger: GGAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCAC...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGGTGGCCAGTCCCGGCTaGGGAAGCCCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQVASPG*GSPSSS
Trigger: GGAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCAC...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGTGGCCAGTCCCGGCTaGGGAAGCCCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAVASPG*GSPSSS
Trigger: GGAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCAC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTCTTCCTACCCTGCTTaGCGGCTCCAAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQSSYPA*RLQGGR
Trigger: CCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGA...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGACCAGGCTGGACAAGTaGGGCTGGCACTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAATRLDK*GWHCDV
Trigger: CACATCGCAGTGCCAGCCTCACTTGTCCAGCCTGGT...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATGGCTCAGGGTCTCGATaGGGCGGGCATAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADGSGSR*GGHSPG
Trigger: CCCAGGGCTATGCCCGCCTCATCGAGACCCTGAGCC...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGAGCAGCCCCATCATCTaGAGCTGGTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQSSPII*SWWEGR
Trigger: CCTGCCCTCCCACCAGCTTCAGATGATGGGGCTGCT...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGTGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACC +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPECPGGC*RDSQAT
Trigger: GGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCA...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGGGAGGGGGAGTCTGTaGTCCCGGGGTCCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQGRGSL*SRGPAG
Trigger: ACCCGCGGGACCCCGGGAGCACAGACTCCCCCTCCC...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000348066.8
ENST00000572543.5
CDS-3UTR GCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCCCTGGCAAGGCACCTaGCCAGCTGCTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQPWQGT*PAAAIS
Trigger: AGAGATCGCAGCAGCTGGGCAGGTGCCTTGCCAGGG...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCATGGGCAGCAGCCAGGTaGAGAAGGCTCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAWAAAR*RRLMPR
Trigger: CCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCA...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGAGGGCGAGGAGACGCTaGTCAGACCAGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQRARRR*SDQCLG
Trigger: GCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCT...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGCCCCAGGGCGCAGGTaGGCAGTCCTGGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFAPGRR*AVLARQ
Trigger: CTGCCTAGCCAGGACTGCGCACCTGCGCCCTGGGGC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACAGTGGAGGAGGCTCTaGGGGGTGAGCGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAQWRRL*GVSVGD
Trigger: ATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGGAGCTCTGGGGGAAGTaGGGCTATCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAAELWGK*GYQWRR
Trigger: CCTCCTCCACTGATAGCCCCACTTCCCCCAGAGCTC...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCGAGCCAAGTGCCTGGTaGGCGTCAAGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPEPSAW*ASSLQP
Trigger: GGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTC...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGGGAGCATCAGGACCCTaGCAAGGCACCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQGASGP*QGTCPA
Trigger: AGCTGGGCAGGTGCCTTGCCAGGGTCCTGATGCTCC...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGTCCACACTCCGCCACTaGCTCAGGGTCTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAASTLRH*LRVSMR
Trigger: CCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGA...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTGGCCAGTCCCGGCTaGGGAAGCCCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEVASPG*GSPSSS
Trigger: GGAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCAC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGCTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAALDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGCAGAACAGGGGGTATaGGCGGCCTCTGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFAEQGV*AASASG
Trigger: CCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGCAGCCCCGTGACCCTTaGGCTCCTCCCCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWQPRDP*APPHCH
Trigger: ATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTG...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGAGCAGCCCCATCATCTaGAGCTGGTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQSSPII*SWWEGR
Trigger: CCTGCCCTCCCACCAGCTTCAGATGATGGGGCTGCT...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGGGTAGTGCTGCTGGATaGGCACAGCCGCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWGSAAG*AQPLGG
Trigger: GCCGCCGAGCGGCTGTGCTCATCCAGCAGCACTACC...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGGTGGCCAGAGTCGGGTaGTGGGGTAAGACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQVARVG*WGKTGP
Trigger: TGGCCCTGTCTTACCCCATCACCCGACTCTGGCCAC...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPKPPAR*SSPVRR
Trigger: CCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTT...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWKPPAR*SSPVRR
Trigger: CCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTT...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPACGAK*LVGVKP
Trigger: AGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGC...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAACGAK*LVGVKP
Trigger: AGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCTCCCGCCCTGCCACCTaGAAAGACACCAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSASRPAT*KDTSPT
Trigger: GGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGA...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGGCTGCTACCTCCTGCTaGTCCTTCAGCCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWAATSC*SFSRRP
Trigger: GGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGC...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CTCCTTCAGCCGCCGGCCCTTGTACTTTCGGAAGGCCGTCTGGATGACTCGGGCGCTGCTACCTCCTGCTaGTCCTTCAGCCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQPPALVLSEGRLDDSGAATSC*SFSRRP
Trigger: GGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGC...GCCCGAGTCATCCAGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGGGGAGGGCCGGGCCTaGGGCGGTAGGAGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARGEGRA*GGRSGS
Trigger: ACTACCGCTCCTACCGCCGCAGGCCCGGCCCTCCCC...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAAAGGAGCCTTTGTTaGGGGCAGGCAGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWERSLC*GQAGWP
Trigger: CGGCCACCCTGCCTGCCCGCAACAAAGGCTCCTTTC...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGGGTCACAGCGGAAGATaGAGGTATGTGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQGHSGR*RYVGRG
Trigger: CCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGGGTCACAGCGGAAGATaGAGGTATGTGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPGHSGR*RYVGRG
Trigger: CCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACTGCAGAGACAGGCGTaGGTTCGGGGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKALQRQA*VRGAGL
Trigger: CAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCAG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGCAGAGACAGGCGTaGGTTCGGGGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSALQRQA*VRGAGL
Trigger: CAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCAG...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGGTGGAGCCAAGTGCCTaGTGGGCGTCAAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQVEPSA*WASSLQ
Trigger: CTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCAC...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGGGAGCATCAGGACCCTaGCAAGGCACCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQGASGP*QGTCPA
Trigger: AGCTGGGCAGGTGCCTTGCCAGGGTCCTGATGCTCC...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSARKGLP*ARRSGP
Trigger: GGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCG...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGCGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPRKGLP*ARRSGP
Trigger: GGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCG...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTCCCCCTGGCGGGAGCGGGTCCTTaGGCTGCACTTGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: TEGSNKGEQESCRQGLPLAGAGP*AALGRR
Trigger: GCGCCGCCCAAGTGCAGCCCAAGGACCCGCTCCCGC...CAGGGGGAGCCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR CCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGTGTCCAGGATGGAGATaGGAGGAGGCCCGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWCPGWR*EEARRA
Trigger: AGCCCGACGGGCCTCCTCCCATCTCCATCCTGGACA...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361571.9
ENST00000414043.7
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCCAGGTGTCCAGGATaGAGATGGGAGGAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAARCPG*RWEEAR
Trigger: ACGGGCCTCCTCCCATCTCCATCCTGGACACCTGGC...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361571.9
ENST00000414043.7
CDS-3UTR TCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCCTTGGTATTCATGGTaGGGGCTCCAGGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQPWYSW*GLQGAR
Trigger: CCTTGCCCCCTGGAGCCCTCACCATGAATACCAAGG...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
CDS-3UTR TCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCCTTGGTATTCATGGTaGGGGCTCCAGGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAPWYSW*GLQGAR
Trigger: CCTTGCCCCCTGGAGCCCTCACCATGAATACCAAGG...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
CDS-3UTR TCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGTCTCCCACCTGCTACTaGCTGTGGTGGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWSPTCY*LWWGTP
Trigger: CGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGA...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGCAGCCCCGTGACCCTTaGGCTCCTCCCCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEQPRDP*APPHCH
Trigger: ATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTG...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGGAAGGCCGTCTGGATaGCTCGGGCAGCCTCATACA +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAGRPSG*LGQPHT
Trigger: TGTATGAGGCTGCCCGAGTCATCCAGACGGCCTTCC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGCCGCAGGAATCTCATaGTCTTCCGGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWAAGIS*SSGLPG
Trigger: ACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGC...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRACGAK*LVGVKP
Trigger: AGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGC...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCCCGCCCTGCCACCTaGAAAGACACCAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRSRPAT*KDTSPT
Trigger: GGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGA...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGAGGCACCTGCCCAGCTaGTGCGATCTCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPERHLPS*CDLCHP
Trigger: CGGATGGCAGAGATCGCAGCAGCTGGGCAGGTGCCT...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGAGGCACCTGCCCAGCTaGTGCGATCTCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRRHLPS*CDLCHP
Trigger: CGGATGGCAGAGATCGCAGCAGCTGGGCAGGTGCCT...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATCCCTGGCAAGGCACCTaGCCAGCTGCTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADPWQGT*PAAAIS
Trigger: AGAGATCGCAGCAGCTGGGCAGGTGCCTTGCCAGGG...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTCCCTGGCAAGGCACCTaGCCAGCTGCTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPPWQGT*PAAAIS
Trigger: AGAGATCGCAGCAGCTGGGCAGGTGCCTTGCCAGGG...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGGTGCAGAAGGCTCATaGCCCGGAAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAGAEGS*PGRGFH
Trigger: ATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACC...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGGTGCAGAAGGCTCATaGCCCGGAAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAGAEGS*PGRGFH
Trigger: ATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGCTGCTACCTCCTGCTaGTCCTTCAGCCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQAATSC*SFSRRP
Trigger: GGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGC...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCTGCTGCTACCTCCTaGTGCTCCTTCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRAAATS*CSFSRR
Trigger: CCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGC...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQALDYS*CYLLLL
Trigger: GAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGC...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATGGTCACAGCGGAAGATaGAGGTATGTGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADGHSGR*RYVGRG
Trigger: CCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGCACAAGTAGAAAGTaGCCGTGGAGCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQCTSRK*PWSRQE
Trigger: CTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCA...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAAAGLVG*VSKICC
Trigger: GCAGCAGATTTTGGACACCCACCCAACCAAGCCTGC...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCTGCAGAGACAGGCGTaGGTTCGGGGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRLQRQA*VRGAGL
Trigger: CAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCAG...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGCAGTGGAGGAGGCTCTaGGGGGTGAGCGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWQWRRL*GVSVGD
Trigger: ATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTG...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGAGCCAAGTGCCTGGTaGGCGTCAAGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFEPSAW*ASSLQP
Trigger: GGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGCCTAGGATCAGCCTGTaGAGCCAAGTGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWPRISL*SQVPGG
Trigger: CCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGG...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGCGGAGCAGGGATGCTTaGAGCTTCGTCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAARSRDA*SFVTDE
Trigger: CTCATCAGTGACGAAGCTCCAAGCATCCCTGCTCCG...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCCTTGACCCCACCCTCTaGGTAGGACCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPLDPTL*VGPLWG
Trigger: TCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAG...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGCGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPERKGLP*ARRSGP
Trigger: GGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCG...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCTCCACACTCCGCCACTaGCTCAGGGTCTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSASTLRH*LRVSMR
Trigger: CCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGA...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGCTCAGACCAGTGTCTaGGCTGGAGGAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPAQTSV*AGGGWR
Trigger: TCGCCACCCTCCTCCAGCCCAGACACTGGTCTGAGC...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGATGCGGGCAGGCAGGGTaGCCGAAGTCCGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARCGQAG*PKSGGE
Trigger: CTCCCCACCGGACTTCGGCCACCCTGCCTGCCCGCA...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGGGTGGCCAGGTCATGTaGCCAGTCCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETGGQVM*PVPAGE
Trigger: TTCCCCAGCCGGGACTGGCCACATGACCTGGCCACC...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGGGTGGCCAGGTCATGTaGCCAGTCCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDAGGQVM*PVPAGE
Trigger: TTCCCCAGCCGGGACTGGCCACATGACCTGGCCACC...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGGTGGCCAGGTCATGTaGCCAGTCCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRGGQVM*PVPAGE
Trigger: TTCCCCAGCCGGGACTGGCCACATGACCTGGCCACC...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCCACTTTGGGAGAGATaGTGCGGTGTTTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQPLWER*CGVSCC
Trigger: GCAGCACGAAACACCGCATCATCTCTCCCAAAGTGG...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGCAGAACAGGGGGTATaGGCGGCCTCTGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEAEQGV*AASASG
Trigger: CCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTCTCCCACCTGCTACTaGCTGTGGTGGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQSPTCY*LWWGTP
Trigger: CGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGA...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGTCTTCCTACCCTGCTTaGCGGCTCCAAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETSSYPA*RLQGGR
Trigger: CCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGA...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGCTGGTTGTCGTCCAGTaGCAGCCAGTCAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAALVVVQ*QPVKLS
Trigger: ACTCAACTTGACTGGCTGTCACTGGACGACAACCAG...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCCCCTGGCCTTCATCCTaGACTGGAGGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPPWPSS*TGGASG
Trigger: TCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTAGCAGCCCCATCATCTaGAGCTGGTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFSSPII*SWWEGR
Trigger: CCTGCCCTCCCACCAGCTTCAGATGATGGGGCTGCT...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGATGTCCGCTCCCGCATTaGGGCTCCAGCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARCPLPH*GSSLGQ
Trigger: CTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACA...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATTTCGCTGGGAGGGGTTaGGCTGGGGAAATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADFAGRG*AGEMVH
Trigger: GTGGACCATTTCCCCAGCTCAACCCCTCCCAGCGAA...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAATGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACC +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVECPGGC*RDSQAT
Trigger: GGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCA...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGGAAGGCCGTCTGGATaGCTCGGGCAGCCTCATACA +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPGRPSG*LGQPHT
Trigger: TGTATGAGGCTGCCCGAGTCATCCAGACGGCCTTCC...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFKPPAR*SSPVRR
Trigger: CCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTT...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGGGTATGAGCGGCCTCTaGCTCGGGGAAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDAGMSGL*LGEVWA
Trigger: AGCCCAGACTTCCCCGAGGCAGAGGCCGCTCATACC...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGGTATGAGCGGCCTCTaGCTCGGGGAAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFGMSGL*LGEVWA
Trigger: AGCCCAGACTTCCCCGAGGCAGAGGCCGCTCATACC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGTCCCGCCCTGCCACCTaGAAAGACACCAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWSRPAT*KDTSPT
Trigger: GGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGA...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCCCGCCCTGCCACCTaGAAAGACACCAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFSRPAT*KDTSPT
Trigger: GGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGA...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGCAAGACCACTACCCGTaGTTCGAACCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRQDHYP*FEPRPL
Trigger: CAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTG...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCAGGGCGAGGAGACGCTaGTCAGACCAGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFRARRR*SDQCLG
Trigger: GCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCT...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGGGCGAGGAGACGCTaGTCAGACCAGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWRARRR*SDQCLG
Trigger: GCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCT...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGAGGGCGAGGAGACGCTaGTCAGACCAGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETRARRR*SDQCLG
Trigger: GCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCT...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAGCTGCTGCTACCTCCTaGTGCTCCTTCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRAAATS*CSFSRR
Trigger: CCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGC...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGCTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAALDYSC*YLLLLL
Trigger: AAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAG...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTGGGATCATGCTTTCTACCAAGGGGGAGGGCCGGGCCTaGGGCGGTAGGAGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARRSGPFQVERGIMLSTKGEGRA*GGRSGS
Trigger: ACTACCGCTCCTACCGCCGCAGGCCCGGCCCTCCCC...CTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGAAAGGAGCCTTTGTTaGGGGCAGGCAGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRERSLC*GQAGWP
Trigger: CGGCCACCCTGCCTGCCCGCAACAAAGGCTCCTTTC...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGAGACAGGGGCTCCCCCTaGCCCAGAAAGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGDRGSP*PRKPSP
Trigger: GGGAGAGGGCTTTCTGGGGCAGGGGGAGCCCCTGTC...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGTGCACAAGTAGAAAGTaGCCGTGGAGCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWCTSRK*PWSRQE
Trigger: CTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCA...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATGGGGGAGGGCTAGTCTaGTCCCCAACTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADGGGLV*SPTLPL
Trigger: CAGAGGAAGAGTTGGGGAGCAGACTAGCCCTCCCCC...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGGGAATGTGGGGACGATaGAAGAGTGAACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAAGMWGR*KSERSS
Trigger: GCTGCTACGTTCACTCTTCCATCGTCCCCACATTCC...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCAGTGGAGGAGGCTCTaGGGGGTGAGCGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPQWRRL*GVSVGD
Trigger: ATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGACAGTGGAGGAGGCTCTaGGGGGTGAGCGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRQWRRL*GVSVGD
Trigger: ATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTG...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGAGCTCTGGGGGAAGTaGGGCTATCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEELWGK*GYQWRR
Trigger: CCTCCTCCACTGATAGCCCCACTTCCCCCAGAGCTC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACTGGGAGGAGCTGGTaGGGCAGAAGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWTGRSW*GRRLSA
Trigger: GGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGT...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCAGGGCTCCAGTTCACTaGCCCCAACAGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSARAPVH*PQQVLQ
Trigger: TTGGAGGACCTGTTGGGGCCAGTGAACTGGAGCCCT...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGCTTGACCCCACCCTCTaGGTAGGACCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPELDPTL*VGPLWG
Trigger: TCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAG...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGCGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWRKGLP*ARRSGP
Trigger: GGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCG...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGACCAGTGTCTGGGCTaGAGGAGGGTGGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFDQCLG*RRVAIG
Trigger: CCCTATCGCCACCCTCCTCCAGCCCAGACACTGGTC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGCTCAGACCAGTGTCTaGGCTGGAGGAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFAQTSV*AGGGWR
Trigger: TCGCCACCCTCCTCCAGCCCAGACACTGGTCTGAGC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGTTTCGGAAGGCCGTCTaGATGACTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQFRKAV*MTRAAS
Trigger: TGAGGCTGCCCGAGTCATCCAGACGGCCTTCCGAAA...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCCTTCGGAACTTGCTCTaGATCAGGATGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPLRNLL*IRMAAW
Trigger: CCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAG...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGAGTGGCCAGTCCCGGCTaGGGAAGCCCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGVASPG*GSPSSS
Trigger: GGAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCAC...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGGGTGGCCAGGTCATGTaGCCAGTCCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVGGQVM*PVPAGE
Trigger: TTCCCCAGCCGGGACTGGCCACATGACCTGGCCACC...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACCCCCGGCGGAGTGGTaGTCCCAGGAGAACCTCCGA +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEPPAEW*SQENLR
Trigger: TCGGAGGTTCTCCTGGGACCACCACTCCGCCGGGGG...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR TCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCCTTGGTATTCATGGTaGGGGCTCCAGGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETPWYSW*GLQGAR
Trigger: CCTTGCCCCCTGGAGCCCTCACCATGAATACCAAGG...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
CDS-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQCDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACCACTTTGGGAGAGATaGTGCGGTGTTTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAPLWER*CGVSCC
Trigger: GCAGCACGAAACACCGCATCATCTCTCCCAAAGTGG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGCAGTGCCTCCTCTTaGAGAACCCCCTCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPSSASS*RTPSRS
Trigger: ACTTCTCGAGGGGGTTCTTCAAGAGGAGGCACTGCT...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGAGCAGTGCCTCCTCTTaGAGAACCCCCTCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWSSASS*RTPSRS
Trigger: ACTTCTCGAGGGGGTTCTTCAAGAGGAGGCACTGCT...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACCCTCTGGGGGCTGTTaGGAAAACGATCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAPSGGC*ENDQGQ
Trigger: TTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGATCTCCCACCTGCTACTaGCTGTGGTGGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARSPTCY*LWWGTP
Trigger: CGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGA...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCAGCCCCGTGACCCTTaGGCTCCTCCCCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVQPRDP*APPHCH
Trigger: ATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GACCACTACCCGTGCTTCGAACCCAGGCCCCTGGCCTTCATCCTGAACTGGAGGCAGCCCCGTGACCCTTaGGCTCCTCCCCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: DHYPCFEPRPLAFILNWRQPRDP*APPHCH
Trigger: ATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTG...CCTCCAGTTCAGGATGAAGGCCAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCATCTTCCTACCCTGCTTaGCGGCTCCAAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPSSYPA*RLQGGR
Trigger: CCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGA...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGACCAGGCTGGACAAGTaGGGCTGGCACTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETTRLDK*GWHCDV
Trigger: CACATCGCAGTGCCAGCCTCACTTGTCCAGCCTGGT...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTCCCTGGCCTTCATCCTaGACTGGAGGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPPWPSS*TGGASG
Trigger: TCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGGGCTCAGGGTCTCGATaGGGCGGGCATAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGGSGSR*GGHSPG
Trigger: CCCAGGGCTATGCCCGCCTCATCGAGACCCTGAGCC...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGAGCAGCCCCATCATCTaGAGCTGGTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVSSPII*SWWEGR
Trigger: CCTGCCCTCCCACCAGCTTCAGATGATGGGGCTGCT...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGGGTAGTGCTGCTGGATaGGCACAGCCGCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGGSAAG*AQPLGG
Trigger: GCCGCCGAGCGGCTGTGCTCATCCAGCAGCACTACC...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGGCCGCAGGAATCTCATaGTCTTCCGGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDAAAGIS*SSGLPG
Trigger: ACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGC...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGTGGCCAGAGTCGGGTaGTGGGGTAAGACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGVARVG*WGKTGP
Trigger: TGGCCCTGTCTTACCCCATCACCCGACTCTGGCCAC...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGAAGCCTCCAGCCCGCTaGTCCAGTCCTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVKPPAR*SSPVRR
Trigger: CCTCCTGACAGGACTGGAGCAGCGGGCTGGAGGCTT...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTTCTGGGCTTACTCCCTaGCCCCCTCCATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPSGLTP*PPPYVW
Trigger: CCAGACATATGGAGGGGGGCAGGGAGTAAGCCCAGA...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGGGGCCCCTCCCGCCCTaGCACCTGCAAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGGPLPP*HLQRHQ
Trigger: CTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCC...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGATCCGCTTCTCCATCTaGTCCAGTCGCTCTAGTATG +
Preference number: 4 (lower is better)
Translates to: AESGGDTVSPETRGACAAIRFSI*SSRSSM
Trigger: CATACTAGAGCGACTGGAGCAGATGGAGAAGCGGAT...CGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGAGGCACCTGCCCAGCTaGTGCGATCTCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVRHLPS*CDLCHP
Trigger: CGGATGGCAGAGATCGCAGCAGCTGGGCAGGTGCCT...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGGGTGCAGAAGGCTCATaGCCCGGAAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWGAEGS*PGRGFH
Trigger: ATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACC...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGGGTGCAGAAGGCTCATaGCCCGGAAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETGAEGS*PGRGFH
Trigger: ATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACC...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTGGTGCAGAAGGCTCATaGCCCGGAAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFGAEGS*PGRGFH
Trigger: ATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACC...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAATGGGCAGCAGCCAGGTaGAGAAGGCTCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEWAAAR*RRLMPR
Trigger: CCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCA...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACTGGGCAGCAGCCAGGTaGAGAAGGCTCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNWAAAR*RRLMPR
Trigger: CCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCA...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCGTCGGGAATGCTCAGTaGCTGTCGGTTCCAACGGAA +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPVGNAQ*LSVPTE
Trigger: TTCCGTTGGAACCGACAGGCACTGAGCATTCCCGAC...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGCTGCTGCTACCTCCTaGTGCTCCTTCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNAAATS*CSFSRR
Trigger: CCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGCTGCTGCTACCTCCTaGTGCTCCTTCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEAAATS*CSFSRR
Trigger: CCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGCAGC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CAGCAGCCAGGTGCAGAAGGCTCATGCCCCGGAAGGGGCTTCCATGGGCCAGACCGGGCTGCCTGGTCCTaGTTCTTGGTGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QQPGAEGSCPGRGFHGPDRAAWS*FLVRKE
Trigger: CTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCG...GTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATTGCACAAGTAGAAAGTaGCCGTGGAGCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADCTSRK*PWSRQE
Trigger: CTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCA...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGAGCGGGTCCTTGGGCTaGACTTGGGCGGCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGSGSLG*TWAAPD
Trigger: ATCCGGCGCCGCCCAAGTGCAGCCCAAGGACCCGCT...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTTCGGGGAGCAGGCTTaGTTGGGTGGGTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPFGEQA*LGGCPK
Trigger: TTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAA...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGGAGGTGTGTGCCTTaGGGAGCTCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPGRCVP*GALGEV
Trigger: CACTTCCCCCAGAGCTCCCCAAGGCACACACCTCCC...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGAGCCAAGTGCCTGGTaGGCGTCAAGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNEPSAW*ASSLQP
Trigger: GGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGAGCCAAGTGCCTGGTaGGCGTCAAGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEEPSAW*ASSLQP
Trigger: GGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGGTGGAGCCAAGTGCCTaGTGGGCGTCAAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVVEPSA*WASSLQ
Trigger: CTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCAC...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCCCTAGGATCAGCCTGTaGAGCCAAGTGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFPRISL*SQVPGG
Trigger: CCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGG...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATCCGACAGCTCCGAGGGCGAGGAGACGCTGCTCAGACCAGTGTCTGGGCTGGACCTAGGATCAGCCTGTaGAGCCAAGTGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IRQLRGRGDAAQTSVWAGPRISL*SQVPGG
Trigger: CCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGG...TCCAGCCCAGACACTGGTCTGAGCAGCGTCTCCTCGCCCTCGGAGCTGTCGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATAGGGCTCCAGTTCACTaGCCCCAACAGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADRAPVH*PQQVLQ
Trigger: TTGGAGGACCTGTTGGGGCCAGTGAACTGGAGCCCT...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACGGAGCAGGGATGCTTaGAGCTTCGTCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKARSRDA*SFVTDE
Trigger: CTCATCAGTGACGAAGCTCCAAGCATCCCTGCTCCG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGTAAGACACCAGGCTaGACAAGTGAGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQRKTPG*TSEAGT
Trigger: AGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTACG...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCGGAGCATCAGGACCCTaGCAAGGCACCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTGASGP*QGTCPA
Trigger: AGCTGGGCAGGTGCCTTGCCAGGGTCCTGATGCTCC...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCCTTCATCCTGAACTaGAGGAGCATCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAAFILN*RSIRTL
Trigger: CAGGGTCCTGATGCTCCTCCAGTTCAGGATGAAGGC...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGACGGAAGGGGCTTCCATaGGCCAGACGTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRRKGLP*ARRSGP
Trigger: GGGTCCTGAACGTCTGGCCCATGGAAGCCCCTTCCG...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCCACACTCCGCCACTaGCTCAGGGTCTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDASTLRH*LRVSMR
Trigger: CCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGA...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGATGAGCCACAGACAATaGCAGACGGCCCAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWMSHRQ*QTAQRV
Trigger: GACTCTCTGGGCCGTCTGCCATTGTCTGTGGCTCAT...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCGACCAGTGTCTGGGCTaGAGGAGGGTGGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTDQCLG*RRVAIG
Trigger: CCCTATCGCCACCCTCCTCCAGCCCAGACACTGGTC...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAGACCAGTGTCTGGGCTaGAGGAGGGTGGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRDQCLG*RRVAIG
Trigger: CCCTATCGCCACCCTCCTCCAGCCCAGACACTGGTC...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCAAAGGGCAGTTCGCTaGGAGGGGTTGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETQRAVR*EGLSWG
Trigger: TCCCCAGCTCAACCCCTCCCAGCGAACTGCCCTTTG...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGCTTCGGAACTTGCTCTaGATCAGGATGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPELRNLL*IRMAAW
Trigger: CCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAG...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRAQRRQ*WEPRRI
Trigger: TATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTGTCCAGGATGGAGATaGGAGGAGGCCCGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQCPGWR*EEARRA
Trigger: AGCCCGACGGGCCTCCTCCCATCTCCATCCTGGACA...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361571.9
ENST00000414043.7
CDS-3UTR CCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGCCAGGTGTCCAGGATaGAGATGGGAGGAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPARCPG*RWEEAR
Trigger: ACGGGCCTCCTCCCATCTCCATCCTGGACACCTGGC...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361571.9
ENST00000414043.7
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCTCCTCGGGGAACAGATaGGAGCTGGCGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPSSGNR*ELAEAL
Trigger: GAGAGCCTCCGCCAGCTCCCATCTGTTCCCCGAGGA...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361571.9
ENST00000414043.7
CDS-3UTR CCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCACAGGCTCCATGCCCTaGACCTTCAGCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSATGSMP*TFSFMW
Trigger: CCACATGAAGCTGAAGGTCCAGGGCATGGAGCCTGT...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572543.5
CDS-3UTR TCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGATGATGGAGCCATTCTaGGGCCTTGTCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPMMEPF*GLVFGA
Trigger: TGCCCCAAAGACAAGGCCTCAGAATGGCTCCATCAT...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTCTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFLDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCCACTTTGGGAGAGATaGTGCGGTGTTTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRPLWER*CGVSCC
Trigger: GCAGCACGAAACACCGCATCATCTCTCCCAAAGTGG...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTCCCTCTGGGGGCTGTTaGGAAAACGATCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPPSGGC*ENDQGQ
Trigger: TTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGG...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGGGAATGATGAAAGACTaGAGGGCTCCAGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQGMMKD*RAPVHW
Trigger: CCAGTGAACTGGAGCCCTTCAGTCTTTCATCATTCC...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACTGGTTGTCGTCCAGTaGCAGCCAGTCAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKALVVVQ*QPVKLS
Trigger: ACTCAACTTGACTGGCTGTCACTGGACGACAACCAG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCCCTGGCCTTCATCCTaGACTGGAGGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETPWPSS*TGGASG
Trigger: TCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGGGGTGCAAGAGAAATaGTCCACGTTGAGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRGVQEK*STLSGS
Trigger: TGACCCGCTCAACGTGGATCATTTCTCTTGCACCCC...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATGGGGTGCAAGAGAAATaGTCCACGTTGAGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADGVQEK*STLSGS
Trigger: TGACCCGCTCAACGTGGATCATTTCTCTTGCACCCC...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGGGGGTGCAAGAGAAATaGTCCACGTTGAGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRGVQEK*STLSGS
Trigger: TGACCCGCTCAACGTGGATCATTTCTCTTGCACCCC...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGGGTGCAAGAGAAATaGTCCACGTTGAGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEGVQEK*STLSGS
Trigger: TGACCCGCTCAACGTGGATCATTTCTCTTGCACCCC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGGGCACTAGAATAGGCTaGCGTGACGGAAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRGTRIG*RDGKGA
Trigger: GGCACCTTTTCCGTCACGTCAGCCTATTCTAGTGCC...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTTCGCTGGGAGGGGTTaGGCTGGGGAAATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQFAGRG*AGEMVH
Trigger: GTGGACCATTTCCCCAGCTCAACCCCTCCCAGCGAA...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGAGTTCCCGCTGCTCGTaGTCTGATAGTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRSSRCS*SDSVSR
Trigger: CCTGCTGACACTATCAGATCACGAGCAGCGGGAACT...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGAGTTCCCGCTGCTCGTaGTCTGATAGTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPESSRCS*SDSVSR
Trigger: CCTGCTGACACTATCAGATCACGAGCAGCGGGAACT...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGGGAAGGCCGTCTGGATaGCTCGGGCAGCCTCATACA +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVGRPSG*LGQPHT
Trigger: TGTATGAGGCTGCCCGAGTCATCCAGACGGCCTTCC...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCGGAAGGCCGTCTGGATaGCTCGGGCAGCCTCATACA +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTGRPSG*LGQPHT
Trigger: TGTATGAGGCTGCCCGAGTCATCCAGACGGCCTTCC...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGGCCGCAGGAATCTCATaGTCTTCCGGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVAAGIS*SSGLPG
Trigger: ACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGC...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGCCGCAGGAATCTCATaGTCTTCCGGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQAAGIS*SSGLPG
Trigger: ACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGC...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGGTATGAGCGGCCTCTaGCTCGGGGAAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEGMSGL*LGEVWA
Trigger: AGCCCAGACTTCCCCGAGGCAGAGGCCGCTCATACC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGAGGTATGAGCGGCCTCTaGCTCGGGGAAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGGMSGL*LGEVWA
Trigger: AGCCCAGACTTCCCCGAGGCAGAGGCCGCTCATACC...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCTCCTCTTCCTACCCTaGTTGACGGCTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPLLFLP*LTAPRG
Trigger: CCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGAGGAG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCACTCCTCTTCCTACCCTaGTTGACGGCTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPLLFLP*LTAPRG
Trigger: CCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGAGGAG...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGAGCTGCTGCGATCTCTaGCATCCGCTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRSCCDL*HPLLHL
Trigger: CAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCT...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGAGCTGCTGCGATCTCTaGCATCCGCTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPESCCDL*HPLLHL
Trigger: CAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCT...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACACCTGCCCAGCTGCTaGGATCTCTGCCATCCGCTT +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGHLPSC*DLCHPL
Trigger: AAGCGGATGGCAGAGATCGCAGCAGCTGGGCAGGTG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCACCTGCCCAGCTGCTaGGATCTCTGCCATCCGCTT +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPHLPSC*DLCHPL
Trigger: AAGCGGATGGCAGAGATCGCAGCAGCTGGGCAGGTG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAAGGCACCTGCCCAGCTaGTGCGATCTCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVERHLPS*CDLCHP
Trigger: CGGATGGCAGAGATCGCAGCAGCTGGGCAGGTGCCT...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCCAAGACCACTACCCGTaGTTCGAACCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTQDHYP*FEPRPL
Trigger: CAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTG...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCACAAGACCACTACCCGTaGTTCGAACCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPQDHYP*FEPRPL
Trigger: CAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTG...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCTGGGCAGCAGCCAGGTaGAGAAGGCTCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGWAAAR*RRLMPR
Trigger: CCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCA...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGAGCGGGTCAACCTCCTaGTCTAAGTCCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQSGSTS*SKSKLP
Trigger: TGGAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCT...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCGGGAATGCTCAGTaGCTGTCGGTTCCAACGGAA +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEVGNAQ*LSVPTE
Trigger: TTCCGTTGGAACCGACAGGCACTGAGCATTCCCGAC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGCCAGAGAGTCGGGAATaGTCAGTGCCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWPESRE*SVPVGS
Trigger: GGAACCGACAGGCACTGAGCATTCCCGACTCTCTGG...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTTGCCACTGGTGGATaGAGAGAGAAACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSALATGG*REKLCP
Trigger: TGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACTTGCCACTGGTGGATaGAGAGAGAAACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKALATGG*REKLCP
Trigger: TGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWALDYS*CYLLLL
Trigger: GAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGC...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp ATTGAGGCTCCAGCCTCGGGCAGCCCCACGAAGTCCTCTCGTTTAATCCGCTCCGAAAGGAGCCTTTGTTaGGGGCAGGCAGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: IEAPASGSPTKSSRLIRSERSLC*GQAGWP
Trigger: CGGCCACCCTGCCTGCCCGCAACAAAGGCTCCTTTC...GGAGCGGATTAAACGAGAGGACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGGTCACAGCGGAAGATaGAGGTATGTGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILGHSGR*RYVGRG
Trigger: CCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCTGAGGCCTTGTCTTTaGGGCACAAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRLRPCL*GTRQPL
Trigger: GAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCTCAG...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCAGCGCCGATGGAATGTaGGGACGATGGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPSADGM*GRWKSE
Trigger: TTCACTCTTCCATCGTCCCCACATTCCATCGGCGCT...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTTCAGCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGGGAGCTCTGGGGGAAGTaGGGCTATCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GFSCPNNSSRDHFSHSRRELWGK*GYQWRR
Trigger: CCTCCTCCACTGATAGCCCCACTTCCCCCAGAGCTC...CCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGAGGGAGGTGTGTGCCTTaGGGAGCTCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGGRCVP*GALGEV
Trigger: CACTTCCCCCAGAGCTCCCCAAGGCACACACCTCCC...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CATGGGCTTCAGCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGGGGAGGTGTGTGCCTTaGGGAGCTCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: HGLQLSQQLLPGPLQPLSGRCVP*GALGEV
Trigger: CACTTCCCCCAGAGCTCCCCAAGGCACACACCTCCC...CGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTCCCCCTGACTGGGAGGAGCTGGTaGGGCAGAAGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TEGSNKGEQESCRQGLPLTGRSW*GRRLSA
Trigger: GGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGT...CAGGGGGAGCCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCACTGGGAGGAGCTGGTaGGGCAGAAGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILTGRSW*GRRLSA
Trigger: GGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGT...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGGAGCATCAGGACCCTaGCAAGGCACCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILGASGP*QGTCPA
Trigger: AGCTGGGCAGGTGCCTTGCCAGGGTCCTGATGCTCC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGCCTTCATCCTGAACTaGAGGAGCATCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEAFILN*RSIRTL
Trigger: CAGGGTCCTGATGCTCCTCCAGTTCAGGATGAAGGC...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCTTCCAGGTGGAGCGTaGGATCATGCTTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQLPGGA*DHAFYQ
Trigger: TTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAG...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGATCCACACTCCGCCACTaGCTCAGGGTCTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGSTLRH*LRVSMR
Trigger: CCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGA...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGCTCAGACCAGTGTCTaGGCTGGAGGAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILAQTSV*AGGGWR
Trigger: TCGCCACCCTCCTCCAGCCCAGACACTGGTCTGAGC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTCTTCGGAACTTGCTCTaGATCAGGATGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRLRNLL*IRMAAW
Trigger: CCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAG...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACTCCTCGGGGAACAGATaGGAGCTGGCGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNSSGNR*ELAEAL
Trigger: GAGAGCCTCCGCCAGCTCCCATCTGTTCCCCGAGGA...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361571.9
ENST00000414043.7
CDS-3UTR TCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATATGATGGAGCCATTCTaGGGCCTTGTCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADMMEPF*GLVFGA
Trigger: TGCCCCAAAGACAAGGCCTCAGAATGGCTCCATCAT...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTTGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPCDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGLDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAGTTCACTGGCCCCAACAGGTCCTCCAAACAAGGCCTCTCCTCTTCCTACCCTTCTCCCACCTGCTACTaGCTGTGGTGGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: QFTGPNRSSKQGLSSSYPSPTCY*LWWGTP
Trigger: CGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGA...AGGGTAGGAAGAGGAGAGGCCTTGTTTGGAGGACCTGTTGGGGCCAGTGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCTCTTCCTACCCTGCTTaGCGGCTCCAAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGSSYPA*RLQGGR
Trigger: CCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGA...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCGGAATGATGAAAGACTaGAGGGCTCCAGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPGMMKD*RAPVHW
Trigger: CCAGTGAACTGGAGCCCTTCAGTCTTTCATCATTCC...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAACCAGGCTGGACAAGTaGGGCTGGCACTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARTRLDK*GWHCDV
Trigger: CACATCGCAGTGCCAGCCTCACTTGTCCAGCCTGGT...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGGACAGCCAGTCAAGTTaGGTACTAGGCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRDSQSS*VLGRDR
Trigger: CCTGTCTCTGCCTAGTACTCAACTTGACTGGCTGTC...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAGCAGCCAGGTGCAGAAGGCTCATGCCCCGGAAGGGGCTTCCATGGGCCAGACGACAGCCAGTCAAGTTaGGTACTAGGCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QQPGAEGSCPGRGFHGPDDSQSS*VLGRDR
Trigger: CCTGTCTCTGCCTAGTACTCAACTTGACTGGCTGTC...GTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATCTGGTTGTCGTCCAGTaGCAGCCAGTCAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADLVVVQ*QPVKLS
Trigger: ACTCAACTTGACTGGCTGTCACTGGACGACAACCAG...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAGCAGCCAGGTGCAGAAGGCTCATGCCCCGGAAGGGGCTTCCATGGGCCAGACCTGGTTGTCGTCCAGTaGCAGCCAGTCAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: QQPGAEGSCPGRGFHGPDLVVVQ*QPVKLS
Trigger: ACTCAACTTGACTGGCTGTCACTGGACGACAACCAG...GTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp CTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCAGCCAGCAGCCCCATCATCTaGAGCTGGTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPLSTVAADGTKDGAAASSPII*SWWEGR
Trigger: CCTGCCCTCCCACCAGCTTCAGATGATGGGGCTGCT...GGCTGCAGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCTTCGCTGGGAGGGGTTaGGCTGGGGAAATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILFAGRG*AGEMVH
Trigger: GTGGACCATTTCCCCAGCTCAACCCCTCCCAGCGAA...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGGAAGGCCGTCTGGATaGCTCGGGCAGCCTCATACA +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILGRPSG*LGQPHT
Trigger: TGTATGAGGCTGCCCGAGTCATCCAGACGGCCTTCC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCAACAAAAGATGGGGCTaGAGCCCTTTCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSANKRWG*SPFHSP
Trigger: AGGACTGTGGAAAGGGCTGCAGCCCCATCTTTTGTT...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGACGAK*LVGVKP
Trigger: AGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGC...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGTGCCTACAACCACTaGCAAACTCATGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPSAYNH*QTHGRP
Trigger: AGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGCACT...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGGGCAGAAGGCTCAGTaGCTACAACCACTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRGQKAQ*LQPLPN
Trigger: GTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCC...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGGGGCAGAAGGCTCAGTaGCTACAACCACTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETGQKAQ*LQPLPN
Trigger: GTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCC...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTCTGGGCTTACTCCCTaGCCCCCTCCATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQSGLTP*PPPYVW
Trigger: CCAGACATATGGAGGGGGGCAGGGAGTAAGCCCAGA...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCCTCCTCTTCCTACCCTaGTTGACGGCTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILLLFLP*LTAPRG
Trigger: CCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGAGGAG...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTAGCTGCTGCGATCTCTaGCATCCGCTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFSCCDL*HPLLHL
Trigger: CAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCT...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGAGCTGCTGCGATCTCTaGCATCCGCTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETSCCDL*HPLLHL
Trigger: CAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCT...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGAGCGTGGGATCATaGTTTCTACCAAGACCACTA +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQWSVGS*FLPRPL
Trigger: TAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCA...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGGTGCAGAAGGCTCATaGCCCGGAAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEGAEGS*PGRGFH
Trigger: ATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTAGCGGGTCAACCTCCTaGTCTAAGTCCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPSGSTS*SKSKLP
Trigger: TGGAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCT...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGAGCGGGTCAACCTCCTaGTCTAAGTCCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRSGSTS*SKSKLP
Trigger: TGGAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCT...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCACCCACATCAGAGGGGTaGAAGAGAAATGATCCACGT +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAPTSEG*KRNDPR
Trigger: ACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGG...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGGTCGGGAATGCTCAGTaGCTGTCGGTTCCAACGGAA +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWVGNAQ*LSVPTE
Trigger: TTCCGTTGGAACCGACAGGCACTGAGCATTCCCGAC...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCCAGAGAGTCGGGAATaGTCAGTGCCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPPESRE*SVPVGS
Trigger: GGAACCGACAGGCACTGAGCATTCCCGACTCTCTGG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCCAGAGAGTCGGGAATaGTCAGTGCCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVPESRE*SVPVGS
Trigger: GGAACCGACAGGCACTGAGCATTCCCGACTCTCTGG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGCTTGCCACTGGTGGATaGAGAGAGAAACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRLATGG*REKLCP
Trigger: TGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPALDYS*CYLLLL
Trigger: GAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRALDYS*CYLLLL
Trigger: GAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGC...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGAGTAGCTTCGGAACTTaGTCTGGATCAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPESSFGT*SGSGWP
Trigger: CGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACT...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAAGGGGAGGGCCGGGCCTaGGGCGGTAGGAGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: RQWWEPRRIHSETRRTNKGEGRA*GGRSGS
Trigger: ACTACCGCTCCTACCGCCGCAGGCCCGGCCCTCCCC...TTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCGAAACACGAGGGGCGTaGGCAGCGAAGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGETRGA*AAKAVV
Trigger: CACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTC...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCTGAGGCCTTGTCTTTaGGGCACAAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETLRPCL*GTRQPL
Trigger: GAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCTCAG...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGCTGAGGCCTTGTCTTTaGGGCACAAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDALRPCL*GTRQPL
Trigger: GAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCTCAG...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGAGCGCCGATGGAATGTaGGGACGATGGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRSADGM*GRWKSE
Trigger: TTCACTCTTCCATCGTCCCCACATTCCATCGGCGCT...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTTTCGGGGAGCAGGCTTaGTTGGGTGGGTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRFGEQA*LGGCPK
Trigger: TTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAA...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGTGTTTCGTGCTGCTGCATTTGTGGGTAAGGCTCCCAGAACCAAGCCCCCAGTGGAGGAGGCTCTaGGGGGTGAGCGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: MRCFVLLHLWVRLPEPSPQWRRL*GVSVGD
Trigger: ATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTG...GGGGCTTGGTTCTGGGAGCCTTACCCACAAATGCAGCAGCACGAAACACCGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGAGAGCTCTGGGGGAAGTaGGGCTATCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGELWGK*GYQWRR
Trigger: CCTCCTCCACTGATAGCCCCACTTCCCCCAGAGCTC...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATAGGGAGGTGTGTGCCTTaGGGAGCTCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIGRCVP*GALGEV
Trigger: CACTTCCCCCAGAGCTCCCCAAGGCACACACCTCCC...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGAATCGGCGGGCTCGATACTCAAAGAGCACAGAAGCAGAAAGGGGCCCGAGCCAAGTGCCTGGTaGGCGTCAAGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RQESAGSILKEHRSRKGPEPSAW*ASSLQP
Trigger: GGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTC...GGGCCCCTTTCTGCTTCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATAGTGGAGCCAAGTGCCTaGTGGGCGTCAAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIVEPSA*WASSLQ
Trigger: CTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCAC...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCCCAGTCGCTCTAGTATaGACATCCGGAACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPPVALV*TSGTGC
Trigger: ACAACCAGTTCCGGATGTCCATACTAGAGCGACTGG...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTCCCCCTGTCCACACTCCGCCACTaGCTCAGGGTCTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: TEGSNKGEQESCRQGLPLSTLRH*LRVSMR
Trigger: CCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGA...CAGGGGGAGCCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGTGGGAGGGGTTGAGCTaGGGAAATGGTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPEWEGLS*GNGPHS
Trigger: AGAATGTGGACCATTTCCCCAGCTCAACCCCTCCCA...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACCAAAGGGCAGTTCGCTaGGAGGGGTTGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNQRAVR*EGLSWG
Trigger: TCCCCAGCTCAACCCCTCCCAGCGAACTGCCCTTTG...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAAGGGCAGTTCGCTaGGAGGGGTTGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEQRAVR*EGLSWG
Trigger: TCCCCAGCTCAACCCCTCCCAGCGAACTGCCCTTTG...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATTGAGGCTCCAGCCTCGGGCAGCCCCACGAAGTCCTCTCGTTTAATCCGCTCCCAAAGGGCAGTTCGCTaGGAGGGGTTGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IEAPASGSPTKSSRLIRSQRAVR*EGLSWG
Trigger: TCCCCAGCTCAACCCCTCCCAGCGAACTGCCCTTTG...GGAGCGGATTAAACGAGAGGACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGTTTCGGAAGGCCGTCTaGATGACTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVFRKAV*MTRAAS
Trigger: TGAGGCTGCCCGAGTCATCCAGACGGCCTTCCGAAA...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTGCTCTGGATCAGGATaGCCGCCTGGGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFCSGSG*PPGSSS
Trigger: AGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCA...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACTTCGGAACTTGCTCTaGATCAGGATGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGLRNLL*IRMAAW
Trigger: CCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGGCAGCGGGCAAGGCGCACATGACCCCGGGAATGAGCCACAGACAATGGCACTTCGGAACTTGCTCTaGATCAGGATGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGSGQGAHDPGNEPQTMALRNLL*IRMAAW
Trigger: CCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAG...TGCCATTGTCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGATCTTCCGGGCTGCCTaGTCCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWIFRAA*SCFLVR
Trigger: TCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGAT...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTAGCCCTTCCAGCTCCTaGTTCTGCTTCAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFSPSSS*FCFSSL
Trigger: GAGGGAACTGAAGCAGAACCAGGAGCTGGAAGGGCT...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTGGGTTCTCCATGCCCTaGACCTTCAGCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFGFSMP*TFSFMW
Trigger: CCACATGAAGCTGAAGGTCCAGGGCATGGAGAACCC...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR TCA 90 bp CGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGCATGCTTCTCAAAGGTaGTCAGGTAGGATGCAATCT +
Preference number: 4 (lower is better)
Translates to: RVGTRSALKHEGRAQRRQHASQR*SGRMQS
Trigger: AGATTGCATCCTACCTGATCACCTTTGAGAAGCATG...CTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDACDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGACTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARLDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCCCCTCTGGGGGCTGTTaGGAAAACGATCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTPSGGC*ENDQGQ
Trigger: TTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGG...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGCCCTCTGGGGGCTGTTaGGAAAACGATCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQPSGGC*ENDQGQ
Trigger: TTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGG...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GACCACTACCCGTGCTTCGAACCCAGGCCCCTGGCCTTCATCCTGAACTGGAGGCCCTCTGGGGGCTGTTaGGAAAACGATCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: DHYPCFEPRPLAFILNWRPSGGC*ENDQGQ
Trigger: TTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGG...CCTCCAGTTCAGGATGAAGGCCAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGGCAGAACAGGGGGTATaGGCGGCCTCTGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRAEQGV*AASASG
Trigger: CCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGC...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATAACCAGGCTGGACAAGTaGGGCTGGCACTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTITRLDK*GWHCDV
Trigger: CACATCGCAGTGCCAGCCTCACTTGTCCAGCCTGGT...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACCCCTGGCCTTCATCCTaGACTGGAGGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNPWPSS*TGGASG
Trigger: TCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CTCCTTCAGCCGCCGGCCCTTGTACTTTCGGAAGGCCGTCTGGATGACTCGGGCAGAAATGATCCACGTTaGGCGGGTCAACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLQPPALVLSEGRLDDSGRNDPR*AGQPPA
Trigger: AGCAGGAGGTTGACCCGCTCAACGTGGATCATTTCT...GCCCGAGTCATCCAGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCCGGTGTGGCTTCGATaGTCTGCTTGGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPPVWLR*SAWLVR
Trigger: TCTCACTAGCCAAGCAGATCATCGAAGCCACACCGG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGAGTTCCCGCTGCTCGTaGTCTGATAGTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQSSRCS*SDSVSR
Trigger: CCTGCTGACACTATCAGATCACGAGCAGCGGGAACT...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCGGGCTCCAACAAAGGTaGACAGGAAAGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTGLQQR*TGKLPT
Trigger: TGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCC...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPVSKIC*TRCSTE
Trigger: CTCTGTAGAACACCTGGTGCAGCAGATTTTGGACAC...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGACCACTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCCTGTGGAGCCAAGTaGCTGGTGGGCGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: GPLQPLSTVAADGTKDGAACGAK*LVGVKP
Trigger: AGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGC...AGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp GACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTAGTGCCTACAACCACTaGCAAACTCATGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: DGADSATRSYVHHLPFGPSAYNH*QTHGRP
Trigger: AGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGCACT...AGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATAGTGCCTACAACCACTaGCAAACTCATGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADSAYNH*QTHGRP
Trigger: AGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGCACT...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGAGTGCCTACAACCACTaGCAAACTCATGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GADSATRSYVHHLPFGPESAYNH*QTHGRP
Trigger: AGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGCACT...CTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGGGGCAGAAGGCTCAGTaGCTACAACCACTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVGQKAQ*LQPLPN
Trigger: GTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCC...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAATCTGGGCTTACTCCCTaGCCCCCTCCATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVESGLTP*PPPYVW
Trigger: CCAGACATATGGAGGGGGGCAGGGAGTAAGCCCAGA...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCTCTGGGCTTACTCCCTaGCCCCCTCCATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILSGLTP*PPPYVW
Trigger: CCAGACATATGGAGGGGGGCAGGGAGTAAGCCCAGA...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGGGTATGAGCGGCCTCTaGCTCGGGGAAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRGMSGL*LGEVWA
Trigger: AGCCCAGACTTCCCCGAGGCAGAGGCCGCTCATACC...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCAGACGTTCAGGACCCTTCCAGGTGGAGCGTGGGATCATGCTTTCTACCAAGTCCCGCCCTGCCACCTaGAAAGACACCAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: ARRSGPFQVERGIMLSTKSRPAT*KDTSPT
Trigger: GGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGA...CTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTGAACGTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAAGCTGCTGCGATCTCTaGCATCCGCTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPSCCDL*HPLLHL
Trigger: CAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCT...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCCACCTGCCCAGCTGCTaGGATCTCTGCCATCCGCTT +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGHLPSC*DLCHPL
Trigger: AAGCGGATGGCAGAGATCGCAGCAGCTGGGCAGGTG...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGGAGCGTGGGATCATaGTTTCTACCAAGACCACTA +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPWSVGS*FLPRPL
Trigger: TAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCA...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGTGGAGCGTGGGATCATaGTTTCTACCAAGACCACTA +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWWSVGS*FLPRPL
Trigger: TAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCA...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGAGCGGGTCAACCTCCTaGTCTAAGTCCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDASGSTS*SKSKLP
Trigger: TGGAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCT...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTAGCGGGTCAACCTCCTaGTCTAAGTCCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRSGSTS*SKSKLP
Trigger: TGGAAGCTTGGACTTAGAGCAGGAGGTTGACCCGCT...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCTTCAGCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGGGTCGGGAATGCTCAGTaGCTGTCGGTTCCAACGGAA +
Preference number: 4 (lower is better)
Translates to: GFSCPNNSSRDHFSHSRRVGNAQ*LSVPTE
Trigger: TTCCGTTGGAACCGACAGGCACTGAGCATTCCCGAC...CCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGACCAGAGAGTCGGGAATaGTCAGTGCCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGPESRE*SVPVGS
Trigger: GGAACCGACAGGCACTGAGCATTCCCGACTCTCTGG...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCGTGGCTTCGATGATCTaGTTGGCTAGTGAGATCATG +
Preference number: 4 (lower is better)
Translates to: GTGRTPQRVPMYTTSPSAVASMI*LASEIM
Trigger: CATGATCTCACTAGCCAAGCAGATCATCGAAGCCAC...GGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCCTTGCCACTGGTGGATaGAGAGAGAAACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFLATGG*REKLCP
Trigger: TGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETLDYSC*YLLLLL
Trigger: AAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAG...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp ACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTCCCCCTGGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TEGSNKGEQESCRQGLPLALDYS*CYLLLL
Trigger: GAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGC...CAGGGGGAGCCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGTAGCTTCGGAACTTaGTCTGGATCAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWSSFGT*SGSGWP
Trigger: CGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACT...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAGGGGAGGGCCGGGCCTaGGGCGGTAGGAGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: GGNRGGYIQRRVEQINKAGEGRA*GGRSGS
Trigger: ACTACCGCTCCTACCGCCGCAGGCCCGGCCCTCCCC...TGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp ACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTCCCCCTGCGGGCTGCCTGGTCCTaGTTCTTGGTGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TEGSNKGEQESCRQGLPLRAAWS*FLVRKE
Trigger: CTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCG...CAGGGGGAGCCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACATGATCTTCCGGGCTaGCTGGTCCTGCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGHDLPG*LVLLLG
Trigger: ACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCATGATCTTCCGGGCTaGCTGGTCCTGCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVHDLPG*LVLLLG
Trigger: ACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGAAACAGACGCAAACATaGGGAGTCGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVKQTQT*GVGWGH
Trigger: GTGTCCCCACCCGACTCCGCATGTTTGCGTCTGTTT...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCTGCACAAGTAGAAAGTaGCCGTGGAGCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILCTSRK*PWSRQE
Trigger: CTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCA...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGGTCGCTGCTGTTCAGTCCCTCCATaGCCTGGACCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AVPTTPPGTTSATLDGRCCSVPP*PGPSAS
Trigger: TGAAGCTGAAGGTCCAGGGCATGGAGGGACTGAACA...GCAGCGACCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCAGGAGACAGGCTCCATaGCCTGGACCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPRRQAP*PGPSAS
Trigger: TGAAGCTGAAGGTCCAGGGCATGGAGCCTGTCTCCT...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572543.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTTTCAGCAACCTCGGTaGTGTCCTTGGTATTCATGG +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPFQQPR*CPWYSW
Trigger: CCATGAATACCAAGGACACCACCGAGGTTGCTGAAA...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGTTTCAGCAACCTCGGTaGTGTCCTTGGTATTCATGG +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQFQQPR*CPWYSW
Trigger: CCATGAATACCAAGGACACCACCGAGGTTGCTGAAA...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCAAGATCTTCAGGTGGTaGCTGTTTTCAGCAACCTCG +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPKIFRW*LFSATS
Trigger: CGAGGTTGCTGAAAACAGCCACCACCTGAAGATCTT...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAAAGATCTTCAGGTGGTaGCTGTTTTCAGCAACCTCG +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAKIFRW*LFSATS
Trigger: CGAGGTTGCTGAAAACAGCCACCACCTGAAGATCTT...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGACGGGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCACTCCAGCAGCTTCTTaGGGAGAAAGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GRGGLRNAFLCTPPPLRPTPAAS*GERSSG
Trigger: ACCTGAAGATCTTTCTCCCCAAGAAGCTGCTGGAGT...GGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGGTCGCTGCGGAATGTGGGGACGATaGAAGAGTGAACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: AVPTTPPGTTSATLDGRCGMWGR*KSERSS
Trigger: GCTGCTACGTTCACTCTTCCATCGTCCCCACATTCC...GCAGCGACCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTAGCGCCGATGGAATGTaGGGACGATGGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRSADGM*GRWKSE
Trigger: TTCACTCTTCCATCGTCCCCACATTCCATCGGCGCT...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGAGLVG*VSKICC
Trigger: GCAGCAGATTTTGGACACCCACCCAACCAAGCCTGC...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPAGLVG*VSKICC
Trigger: GCAGCAGATTTTGGACACCCACCCAACCAAGCCTGC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCATTCGGGGAGCAGGCTTaGTTGGGTGGGTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPFGEQA*LGGCPK
Trigger: TTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAA...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTGTGCTGCTGCATTTGTaGGTAAGGCTCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFVLLHL*VRLPEP
Trigger: TGGTTCTGGGAGCCTTACCCACAAATGCAGCAGCAC...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCGAGCTCTGGGGGAAGTaGGGCTATCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGELWGK*GYQWRR
Trigger: CCTCCTCCACTGATAGCCCCACTTCCCCCAGAGCTC...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACCTAGGATCAGCCTGTaGAGCCAAGTGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIPRISL*SQVPGG
Trigger: CCCACCAGGCACTTGGCTCCACAGGCTGATCCTAGG...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCGGAGCAGGGATGCTTaGAGCTTCGTCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVRSRDA*SFVTDE
Trigger: CTCATCAGTGACGAAGCTCCAAGCATCCCTGCTCCG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTGGGTAGGACCACTCTaGGGAGAAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDAWVGPL*GEVCDG
Trigger: ACCATCACAGACTTCTCCCCAGAGTGGTCCTACCCA...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGTGGGTAGGACCACTCTaGGGAGAAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETWVGPL*GEVCDG
Trigger: ACCATCACAGACTTCTCCCCAGAGTGGTCCTACCCA...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTTGACCCCACCCTCTaGGTAGGACCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTILDPTL*VGPLWG
Trigger: TCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAG...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCCTTGACCCCACCCTCTaGGTAGGACCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGLDPTL*VGPLWG
Trigger: TCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAG...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCGTAAGACACCAGGCTaGACAAGTGAGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPRKTPG*TSEAGT
Trigger: AGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTACG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTTCAGCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGCGTAAGACACCAGGCTaGACAAGTGAGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GLQLSQQLLPGPLQPLSTRKTPG*TSEAGT
Trigger: AGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTACG...CGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp TCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCTTCCAGGTGGAGCGTaGGATCATGCTTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: SALKHEGRAQRRQWWEPRLPGGA*DHAFYQ
Trigger: TTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAG...CCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCAGGACCCTTCCAGGTaGAGCGTGGGATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPQDPSR*SVGSCF
Trigger: AAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCCATTCTCCAGGTAGCTaGCCAGCCAGGACATGGTCT +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPHSPGS*PARTWS
Trigger: AGACCATGTCCTGGCTGGCCAGCTACCTGGAGAATG...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCATTCTCCAGGTAGCTaGCCAGCCAGGACATGGTCT +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVHSPGS*PARTWS
Trigger: AGACCATGTCCTGGCTGGCCAGCTACCTGGAGAATG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTGGGAGGGGTTGAGCTaGGGAAATGGTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFWEGLS*GNGPHS
Trigger: AGAATGTGGACCATTTCCCCAGCTCAACCCCTCCCA...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCAAAGGGCAGTTCGCTaGGAGGGGTTGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGQRAVR*EGLSWG
Trigger: TCCCCAGCTCAACCCCTCCCAGCGAACTGCCCTTTG...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCGGACTCCGCAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGCCATCTTGCCACTGGTaGATGCAGAGAGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: GRTPQRVPMYTTSPSALRPSCHW*MQRETL
Trigger: CAGAGTTTCTCTCTGCATCCACCAGTGGCAAGATGG...CCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTGCGGAGTCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCTTTCGGAAGGCCGTCTaGATGACTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILFRKAV*MTRAAS
Trigger: TGAGGCTGCCCGAGTCATCCAGACGGCCTTCCGAAA...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCATGCTCTGGATCAGGATaGCCGCCTGGGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPCSGSG*PPGSSS
Trigger: AGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCA...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGATGCTCTGGATCAGGATaGCCGCCTGGGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRCSGSG*PPGSSS
Trigger: AGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCA...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGTGCGGGCAGGCAGGGTaGCCGAAGTCCGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IQRRVEQINKASQEGAESCGQAG*PKSGGE
Trigger: CTCCCCACCGGACTTCGGCCACCCTGCCTGCCCGCA...CGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAATCTTCCGGGCTGCCTaGTCCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPIFRAA*SCFLVR
Trigger: TCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGAT...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGCATAGAGGGATGTTCTaGAGAAGCCGGGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWHRGMF*RSREQS
Trigger: ACTCTGCTCCCGGCTTCTCCAGAACATCCCTCTATG...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361571.9
CDS-3UTR CCA 90 bp CAAGGCAGCGGGCAAGGCGCACATGACCCCGGGAATGAGCCACAGACAATGGCAAGTCCCTCCATGCCCTaGACCTTCAGCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: QGSGQGAHDPGNEPQTMASPSMP*TFSFMW
Trigger: CCACATGAAGCTGAAGGTCCAGGGCATGGAGGGACT...TGCCATTGTCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
3UTR CAA 72 bp TGCAGAGACAGGCGTGGGTTCGGGGAGCAGGCTTGGTaGGGTGGGTGTCCAAAATCTGCTGCACCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: CRDRRGFGEQAW*GGCPKSAAPGV
Trigger: AACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGCCTTGGTATTCATGGTaGGGGCTCCAGGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRPWYSW*GLQGAR
Trigger: CCTTGCCCCCTGGAGCCCTCACCATGAATACCAAGG...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
CDS-3UTR TCA 90 bp GGCTTCAGCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGGTGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GFSCPNNSSRDHFSHSRRCDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...CCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCTGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTCDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCCTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGLDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCAGCCCTCGACGGTCGCTGCTaGTGGAACAAAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: LQPLSTVAADGTKDGAAALDGRC*WNKRWG
Trigger: GCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAG...GGCTGCAGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGACCACTTTGGGAGAGATaGTGCGGTGTTTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARPLWER*CGVSCC
Trigger: GCAGCACGAAACACCGCATCATCTCTCCCAAAGTGG...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGACCACTTTGGGAGAGATaGTGCGGTGTTTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGPLWER*CGVSCC
Trigger: GCAGCACGAAACACCGCATCATCTCTCCCAAAGTGG...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGCTGGTTGTCGTCCAGTaGCAGCCAGTCAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQLVVVQ*QPVKLS
Trigger: ACTCAACTTGACTGGCTGTCACTGGACGACAACCAG...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCCCTGGCCTTCATCCTaGACTGGAGGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGPWPSS*TGGASG
Trigger: TCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAAGGCTCAGGGTCTCGATaGGGCGGGCATAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RQWWEPRRIHSETRRTNKGSGSR*GGHSPG
Trigger: CCCAGGGCTATGCCCGCCTCATCGAGACCCTGAGCC...TTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGAGAAATGATCCACGTTaGGCGGGTCAACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQRNDPR*AGQPPA
Trigger: AGCAGGAGGTTGACCCGCTCAACGTGGATCATTTCT...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp ACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTCCCCCTGGGCACTAGAATAGGCTaGCGTGACGGAAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TEGSNKGEQESCRQGLPLGTRIG*RDGKGA
Trigger: GGCACCTTTTCCGTCACGTCAGCCTATTCTAGTGCC...CAGGGGGAGCCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCCCGGTGTGGCTTCGATaGTCTGCTTGGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILPVWLR*SAWLVR
Trigger: TCTCACTAGCCAAGCAGATCATCGAAGCCACACCGG...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGACCGGTGTGGCTTCGATaGTCTGCTTGGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARPVWLR*SAWLVR
Trigger: TCTCACTAGCCAAGCAGATCATCGAAGCCACACCGG...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGACCGGTGTGGCTTCGATaGTCTGCTTGGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGPVWLR*SAWLVR
Trigger: TCTCACTAGCCAAGCAGATCATCGAAGCCACACCGG...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAAGTTCCCGCTGCTCGTaGTCTGATAGTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARSSRCS*SDSVSR
Trigger: CCTGCTGACACTATCAGATCACGAGCAGCGGGAACT...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGGCCGCAGGAATCTCATaGTCTTCCGGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRAAGIS*SSGLPG
Trigger: ACCAGGCAGCCCGGAAGATCATGAGATTCCTGCGGC...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGAACAAAAGATGGGGCTaGAGCCCTTTCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDANKRWG*SPFHSP
Trigger: AGGACTGTGGAAAGGGCTGCAGCCCCATCTTTTGTT...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATTGGGTGTCCAAAATCTaGTGCACCAGGTGTTCTACA +
Preference number: 4 (lower is better)
Translates to: PETRGACAAKAVVGTEADWVSKI*CTRCST
Trigger: TGTAGAACACCTGGTGCAGCAGATTTTGGACACCCA...ATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATATCTGGGCTTACTCCCTaGCCCCCTCCATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTISGLTP*PPPYVW
Trigger: CCAGACATATGGAGGGGGGCAGGGAGTAAGCCCAGA...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGGGACCCCGAGCAGCTaGCTGGGGCTCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGGTPSS*LGLQGS
Trigger: GCTGCCCTGGAGCCCCAGGCAGCTGCTCGGGGTCCC...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
59% GC, longest homopolymer 8 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTATCCGCTTCTCCATCTaGTCCAGTCGCTCTAGTATG +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFIRFSI*SSRSSM
Trigger: CATACTAGAGCGACTGGAGCAGATGGAGAAGCGGAT...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGCAAGACCACTACCCGTaGTTCGAACCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRQDHYP*FEPRPL
Trigger: CAGGGGCCTGGGTTCGAAGCACGGGTAGTGGTCTTG...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCCCCACATCAGAGGGGTaGAAGAGAAATGATCCACGT +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFPTSEG*KRNDPR
Trigger: ACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGG...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CAGCAGCCAGGTGCAGAAGGCTCATGCCCCGGAAGGGGCTTCCATGGGCCAGACGTGGCTTCGATGATCTaGTTGGCTAGTGAGATCATG +
Preference number: 4 (lower is better)
Translates to: QQPGAEGSCPGRGFHGPDVASMI*LASEIM
Trigger: CATGATCTCACTAGCCAAGCAGATCATCGAAGCCAC...GTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR GCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGAATCACTTTCCATCTTaGCACTGGTGGATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQNHFPS*HWWMQR
Trigger: TCTCTGCATCCACCAGTGGCAAGATGGAAAGTGATT...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGLDYSC*YLLLLL
Trigger: AAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGACTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRLDYSC*YLLLLL
Trigger: AAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAG...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGCTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVLDYSC*YLLLLL
Trigger: AAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAG...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCGCGCTGGATTACAGCTaGTGCTACCTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGALDYS*CYLLLL
Trigger: GAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAGCGC...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGGAGTGCAAACTTAAGTaGAATCCAGGTCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSALKHEGRAQRRQWWEPECKLK*NPGQLL
Trigger: AAGCAGCTGACCTGGATTGCACTTAAGTTTGCACTC...CGGTTCCCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000414043.7
ENST00000572543.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGAGTAGCTTCGGAACTTaGTCTGGATCAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQSSFGT*SGSGWP
Trigger: CGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACT...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGTAGCTTCGGAACTTaGTCTGGATCAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRSSFGT*SGSGWP
Trigger: CGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACT...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAAGTAGCTTCGGAACTTaGTCTGGATCAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGSSFGT*SGSGWP
Trigger: CGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACT...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACCATGATCTTCCGGGCTaGCTGGTCCTGCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNHDLPG*LVLLLG
Trigger: ACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATG...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGGGGGCCGAGTCGGGTaGAGGCAGGAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGGGRVG*RQEELG
Trigger: CCCCAGCTCCTCCTGCCTGCACCCGACTCGGCCCCC...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
59% GC, longest homopolymer 10 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CACTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCAGGGGGGAGGGCTAGTCTaGTCCCCAACTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HFSHSRRSLLMEQKMGLQGGGLV*SPTLPL
Trigger: CAGAGGAAGAGTTGGGGAGCAGACTAGCCCTCCCCC...CTGCAGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARAGLVG*VSKICC
Trigger: GCAGCAGATTTTGGACACCCACCCAACCAAGCCTGC...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGGGAGCAGGCTTGGTTaGGTGGGTGTCCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARGSRLG*VGVQNL
Trigger: CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCC...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAATTCGGGGAGCAGGCTTaGTTGGGTGGGTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEFGEQA*LGGCPK
Trigger: TTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAA...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCTGGGTAGGACCACTCTaGGGAGAAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTWVGPL*GEVCDG
Trigger: ACCATCACAGACTTCTCCCCAGAGTGGTCCTACCCA...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTGGGTAGGACCACTCTaGGGAGAAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQWVGPL*GEVCDG
Trigger: ACCATCACAGACTTCTCCCCAGAGTGGTCCTACCCA...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCCGTAAGACACCAGGCTaGACAAGTGAGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILRKTPG*TSEAGT
Trigger: AGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTACG...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGATGGACATCCGGAACTaGTTGTCGTCCAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVMDIRN*LSSSDS
Trigger: GCTGTCACTGGACGACAACCAGTTCCGGATGTCCAT...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCCCAGTCGCTCTAGTATaGACATCCGGAACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFPVALV*TSGTGC
Trigger: ACAACCAGTTCCGGATGTCCATACTAGAGCGACTGG...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGCCAGTCGCTCTAGTATaGACATCCGGAACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDAPVALV*TSGTGC
Trigger: ACAACCAGTTCCGGATGTCCATACTAGAGCGACTGG...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGCTTCCAGGTGGAGCGTaGGATCATGCTTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: GLRRSQRKMQVCGARVFWLPGGA*DHAFYQ
Trigger: TTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAG...CCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGACAGGACCCTTCCAGGTaGAGCGTGGGATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGQDPSR*SVGSCF
Trigger: AAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTG...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGACAGGACCCTTCCAGGTaGAGCGTGGGATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARQDPSR*SVGSCF
Trigger: AAAGCATGATCCCACGCTCCACCTGGAAGGGTCCTG...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAATGAGCCACAGACAATaGCAGACGGCCCAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARMSHRQ*QTAQRV
Trigger: GACTCTCTGGGCCGTCTGCCATTGTCTGTGGCTCAT...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTCCATCTTGCCACTGGTaGATGCAGAGAGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RQGSGGHSGRCRYVGRGFPSCHW*MQRETL
Trigger: CAGAGTTTCTCTCTGCATCCACCAGTGGCAAGATGG...AAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCTGTCCCAACAACTCCTCCCGGGACCACTTCAGCCACTCTCGACGGTCGCTGCCCATCTTGCCACTGGTaGATGCAGAGAGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: AVPTTPPGTTSATLDGRCPSCHW*MQRETL
Trigger: CAGAGTTTCTCTCTGCATCCACCAGTGGCAAGATGG...GCAGCGACCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp TCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCATTTCCATCTTGCCACTaGTGGATGCAGAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: SGGDTVSPETRGACAAKAFPSCH*WMQRET
Trigger: AGTTTCTCTCTGCATCCACCAGTGGCAAGATGGAAA...TGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCGAAGGCAGTGGTGGTTTCCATCTTGCCACTaGTGGATGCAGAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: GTRSALKHEGRAQRRQWWFPSCH*WMQRET
Trigger: AGTTTCTCTCTGCATCCACCAGTGGCAAGATGGAAA...CCACCACTGCCTTCGCTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAATCTTCCGGGCTGCCTaGTCCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARIFRAA*SCFLVR
Trigger: TCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGAT...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGAGAAGATGCAGGTATGTaGGGCGCGGGTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGEDAGM*GAGFLE
Trigger: CTCCAGAAAACCCGCGCCCCACATACCTGCATCTTC...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAATGATGGAGCCATTCTaGGGCCTTGTCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEMMEPF*GLVFGA
Trigger: TGCCCCAAAGACAAGGCCTCAGAATGGCTCCATCAT...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAATGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVECDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGCCCCGTGACCCTTaGGCTCCTCCCCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRQPRDP*APPHCH
Trigger: ATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTG...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAGACAGCCAGTCAAGTTaGGTACTAGGCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVEDSQSS*VLGRDR
Trigger: CCTGTCTCTGCCTAGTACTCAACTTGACTGGCTGTC...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACCGGTGTGGCTTCGATaGTCTGCTTGGCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIPVWLR*SAWLVR
Trigger: TCTCACTAGCCAAGCAGATCATCGAAGCCACACCGG...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCATGTCCGCTCCCGCATTaGGGCTCCAGCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGNRGGYIQRRVEQINKACPLPH*GSSLGQ
Trigger: CTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACA...TGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GATGGCCGCCTGGGTCATCTTCTTATAGAGTGCAAACTGCTTGTACTTCCGGTATGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACC +
Preference number: 4 (lower is better)
Translates to: DGRLGHLLIECKLLVLPVCPGGC*RDSQAT
Trigger: GGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCA...TACCGGAAGTACAAGCAGTTTGCACTCTATAAGAAGATGACCCAGGCGGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp CTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCAGCCAGTTCCCGCTGCTCGTaGTCTGATAGTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPLSTVAADGTKDGAAASSRCS*SDSVSR
Trigger: CCTGCTGACACTATCAGATCACGAGCAGCGGGAACT...GGCTGCAGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR TCA 90 bp GGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGGACACGGTCAGCCCTaGAACACGAGGGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GYIQRRVEQINKASQEGAGHGQP*NTRGVR
Trigger: GCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCC...GGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCCCTCCCCTTCGGCCCTaGGGTCAGTGGCCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GYIQRRVEQINKASQEGAPPLRP*GQWPES
Trigger: CGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGG...GGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGCATAGAGACACTCCATaGCCTGGACCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQHRDTP*PGPSAS
Trigger: TGAAGCTGAAGGTCCAGGGCATGGAGTGTCTCTATG...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
CDS-3UTR GCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFVSKIC*TRCSTE
Trigger: CTCTGTAGAACACCTGGTGCAGCAGATTTTGGACAC...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGGCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGTGGGTGTCCAAAATCTaGTGCACCAGGTGTTCTACA +
Preference number: 4 (lower is better)
Translates to: GRAQRRQWWEPRRIHSETWVSKI*CTRCST
Trigger: TGTAGAACACCTGGTGCAGCAGATTTTGGACACCCA...CGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGATCCGCTTCTCCATCTaGTCCAGTCGCTCTAGTATG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVIRFSI*SSRSSM
Trigger: CATACTAGAGCGACTGGAGCAGATGGAGAAGCGGAT...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCGTCGGGAATGCTCAGTaGCTGTCGGTTCCAACGGAA +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGVGNAQ*LSVPTE
Trigger: TTCCGTTGGAACCGACAGGCACTGAGCATTCCCGAC...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGACAGGGCCAGAGAGGGAGGAAACAGACGCAAACATGCGGAGTCGGGTGGGGACTTGCCACTGGTGGATaGAGAGAGAAACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQGQRGRKQTQTCGVGWGLATGG*REKLCP
Trigger: TGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG...TCCCCACCCGACTCCGCATGTTTGCGTCTGTTTCCTCCCTCTCTGGCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGGAAAGGAGCCTTTGTTaGGGGCAGGCAGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRERSLC*GQAGWP
Trigger: CGGCCACCCTGCCTGCCCGCAACAAAGGCTCCTTTC...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGCGGGCTGCCTGGTCCTaGTTCTTGGTGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRRAAWS*FLVRKE
Trigger: CTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCG...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGTGCACAAGTAGAAAGTaGCCGTGGAGCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRCTSRK*PWSRQE
Trigger: CTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCA...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCTGTTCAGTCCCTCCATaGCCTGGACCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILCSVPP*PGPSAS
Trigger: TGAAGCTGAAGGTCCAGGGCATGGAGGGACTGAACA...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGGGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCACTCCAGCAGCTTCTTaGGGAGAAAGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AGLRRSQRKMQVCGARVFTPAAS*GERSSG
Trigger: ACCTGAAGATCTTTCTCCCCAAGAAGCTGCTGGAGT...GAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGTGCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGACTCCAGCAGCTTCTTaGGGAGAAAGATCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ACAAKAVVGTEADTFRDATPAAS*GERSSG
Trigger: ACCTGAAGATCTTTCTCCCCAAGAAGCTGCTGGAGT...CGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGGAATGTGGGGACGATaGAAGAGTGAACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNGMWGR*KSERSS
Trigger: GCTGCTACGTTCACTCTTCCATCGTCCCCACATTCC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCGGAATGTGGGGACGATaGAAGAGTGAACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILGMWGR*KSERSS
Trigger: GCTGCTACGTTCACTCTTCCATCGTCCCCACATTCC...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGGCAGGCTTGGTTGGGTaGGTGTCCAAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGAGLVG*VSKICC
Trigger: GCAGCAGATTTTGGACACCCACCCAACCAAGCCTGC...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCTTCGGGGAGCAGGCTTaGTTGGGTGGGTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGFGEQA*LGGCPK
Trigger: TTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAA...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCAGCCTTCGGGGAGCAGGCTTaGTTGGGTGGGTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LQPLSTVAADGTKDGAAAFGEQA*LGGCPK
Trigger: TTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAA...GGCTGCAGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGCAGGCTTGGTTGGGTGGGTGTCCAAAATCTGCTGCACCAGGTGTTCTACAGACTGCAGAGACAGGCGTaGGTTCGGGGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SRLGWVGVQNLLHQVFYRLQRQA*VRGAGL
Trigger: CAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCAG...TCTGTAGAACACCTGGTGCAGCAGATTTTGGACACCCACCCAACCAAGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573004.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTGCGCAGCCACTGTCATCATCTTaGATGAAGAAGCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: MRSRVGTRSALKHEGRAQPLSSS*MKKQFP
Trigger: AGGAAACTGCTTCTTCATCCAAGATGATGACAGTGG...CTGCGCACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGAATCGGCGGGCTCGATACTCAAAGAGCACAGAAGCAGAAAGGGGCCCAGGGCTCCAGTTCACTaGCCCCAACAGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RQESAGSILKEHRSRKGPRAPVH*PQQVLQ
Trigger: TTGGAGGACCTGTTGGGGCCAGTGAACTGGAGCCCT...GGGCCCCTTTCTGCTTCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACGGAGCAGGGATGCTTaGAGCTTCGTCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIRSRDA*SFVTDE
Trigger: CTCATCAGTGACGAAGCTCCAAGCATCCCTGCTCCG...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCTGGGTAGGACCACTCTaGGGAGAAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILWVGPL*GEVCDG
Trigger: ACCATCACAGACTTCTCCCCAGAGTGGTCCTACCCA...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCCGTAAGACACCAGGCTaGACAAGTGAGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGRKTPG*TSEAGT
Trigger: AGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTACG...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCGTAAGACACCAGGCTaGACAAGTGAGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGRKTPG*TSEAGT
Trigger: AGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTACG...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGACCAGTCGCTCTAGTATaGACATCCGGAACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGPVALV*TSGTGC
Trigger: ACAACCAGTTCCGGATGTCCATACTAGAGCGACTGG...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CTTCAGCCACTCTCGACGGTCGCTGCTGATGGAACAAAAGATGGGGCTGCAGCCGCCTTCATCCTGAACTaGAGGAGCATCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LQPLSTVAADGTKDGAAAAFILN*RSIRTL
Trigger: CAGGGTCCTGATGCTCCTCCAGTTCAGGATGAAGGC...GGCTGCAGCCCCATCTTTTGTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGACTTCCAGGTGGAGCGTaGGATCATGCTTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRLPGGA*DHAFYQ
Trigger: TTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAG...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCCATTCTCCAGGTAGCTaGCCAGCCAGGACATGGTCT +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGHSPGS*PARTWS
Trigger: AGACCATGTCCTGGCTGGCCAGCTACCTGGAGAATG...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACATTCTCCAGGTAGCTaGCCAGCCAGGACATGGTCT +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIHSPGS*PARTWS
Trigger: AGACCATGTCCTGGCTGGCCAGCTACCTGGAGAATG...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGGACCCCATCTTGCCACTGGTaGATGCAGAGAGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: GHSGRCRYVGRGFSGARTPSCHW*MQRETL
Trigger: CAGAGTTTCTCTCTGCATCCACCAGTGGCAAGATGG...GGTCCTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGCCATCTTGCCACTGGTaGATGCAGAGAGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQPSCHW*MQRETL
Trigger: CAGAGTTTCTCTCTGCATCCACCAGTGGCAAGATGG...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGTTTCGGAAGGCCGTCTaGATGACTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRFRKAV*MTRAAS
Trigger: TGAGGCTGCCCGAGTCATCCAGACGGCCTTCCGAAA...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ACTGCCAAACTCATGGAAGGCCTAGGATCAGCCTGTGGAGCCAAGTGCCTGGTGTTTCGGAAGGCCGTCTaGATGACTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TAKLMEGLGSACGAKCLVFRKAV*MTRAAS
Trigger: TGAGGCTGCCCGAGTCATCCAGACGGCCTTCCGAAA...CACCAGGCACTTGGCTCCACAGGCTGATCCTAGGCCTTCCATGAGTTTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATATGCTCTGGATCAGGATaGCCGCCTGGGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTICSGSG*PPGSSS
Trigger: AGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCA...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGTGCGGGCAGGCAGGGTaGCCGAAGTCCGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGCGQAG*PKSGGE
Trigger: CTCCCCACCGGACTTCGGCCACCCTGCCTGCCCGCA...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCATCTTCCGGGCTGCCTaGTCCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGIFRAA*SCFLVR
Trigger: TCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGAT...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGCCCTTCCAGCTCCTaGTTCTGCTTCAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGSPSSS*FCFSSL
Trigger: GAGGGAACTGAAGCAGAACCAGGAGCTGGAAGGGCT...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp ATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGGCCAGGTCATGTaGCCAGTCCCGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: IQRRVEQINKASQEGAESGGQVM*PVPAGE
Trigger: TTCCCCAGCCGGGACTGGCCACATGACCTGGCCACC...CGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAAACGAGGAGAGGGGTGTaGGAGCAAGGCGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RQWWEPRRIHSETRRTNKTRRGV*EQGVGR
Trigger: CCTCCCCACGCCTTGCTCCCACACCCCTCTCCTCGT...TTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp AGACAGGAATCGGCGGGCTCGATACTCAAAGAGCACAGAAGCAGAAAGGGGCCCCAGCGAAGGCAGTGGTaGGAACCGAGGCGGATACAT +
Preference number: 4 (lower is better)
Translates to: RQESAGSILKEHRSRKGPQRRQW*EPRRIH
Trigger: ATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTG...GGGCCCCTTTCTGCTTCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGGCGCAGCGAAGGCAGTaGTGGGAACCGAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRAQRRQ*WEPRRI
Trigger: TATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR CCA 90 bp GGCTCCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAAGAAAGATCTTCAGGTaGTGGCTGTTTTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSGGHSGRCRYVGRGFSGRKIFR*WLFSPG
Trigger: CCCGGGAGAAAACAGCCACCACCTGAAGATCTTTCT...TCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381311.9
CDS-3UTR TCA 90 bp CAAGCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATAATGATGGAGCCATTCTaGGGCCTTGTCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QARPCSPPRGALNRFFTIMMEPF*GLVFGA
Trigger: TGCCCCAAAGACAAGGCCTCAGAATGGCTCCATCAT...TATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGTGCGATTGTAGAGGATaGTGGAGCCATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGCDCRG*WSHSEA
Trigger: GGCCTCAGAATGGCTCCATCATCCTCTACAATCGCA...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCCTCCACTTGATGCCATaGAACATGGGCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILLHLMP*NMGFSC
Trigger: ACAGCTGAAGCCCATGTTTCATGGCATCAAGTGGAG...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTGCAGAACAGGGGGTATaGGCGGCCTCTGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GNRGGYIQRRVEQINKASAEQGV*AASASG
Trigger: CCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGC...ACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCTCTCCCACCTGCTACTaGCTGTGGTGGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GYIQRRVEQINKASQEGASPTCY*LWWGTP
Trigger: CGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGA...GGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACGGAATGATGAAAGACTaGAGGGCTCCAGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNGMMKD*RAPVHW
Trigger: CCAGTGAACTGGAGCCCTTCAGTCTTTCATCATTCC...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGGACAGCCAGTCAAGTTaGGTACTAGGCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGDSQSS*VLGRDR
Trigger: CCTGTCTCTGCCTAGTACTCAACTTGACTGGCTGTC...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp AGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACAAATAAATAAGTGCCCAGGAGGGTGCTaGAGGGACAGCCAGGCGACC +
Preference number: 4 (lower is better)
Translates to: SGGNRGGYIQRRVEQINKCPGGC*RDSQAT
Trigger: GGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCA...CTTATTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGGGAAGGCCGTCTGGATaGCTCGGGCAGCCTCATACA +
Preference number: 4 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRGRPSG*LGQPHT
Trigger: TGTATGAGGCTGCCCGAGTCATCCAGACGGCCTTCC...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR TCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGGTAGTGCTGCTGGATaGGCACAGCCGCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGGSAAG*AQPLGG
Trigger: GCCGCCGAGCGGCTGTGCTCATCCAGCAGCACTACC...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGATTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGAGGGGGAGTCTGTaGTCCCGGGGTCCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: RFFTILCMLQYVQDPSPRGRGSL*SRGPAG
Trigger: ACCCGCGGGACCCCGGGAGCACAGACTCCCCCTCCC...CCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000348066.8
ENST00000572543.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACCATAGAGACACTCCATaGCCTGGACCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNHRDTP*PGPSAS
Trigger: TGAAGCTGAAGGTCCAGGGCATGGAGTGTCTCTATG...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348066.8
ENST00000381311.9
ENST00000414043.7
CDS-3UTR GCA 90 bp CGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAAAACAAAAGATGGGGCTaGAGCCCTTTCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: RSEGSGGNRGGYIQRRVENKRWG*SPFHSP
Trigger: AGGACTGTGGAAAGGGCTGCAGCCCCATCTTTTGTT...TTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CAACGCGTTCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAAACAAAAGATGGGGCTaGAGCCCTTTCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: QRVPMYTTSPSALRSVARNKRWG*SPFHSP
Trigger: AGGACTGTGGAAAGGGCTGCAGCCCCATCTTTTGTT...TCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGAACGCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CCGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: PEVTAEDAGMWGAGFLEPVSKIC*TRCSTE
Trigger: CTCTGTAGAACACCTGGTGCAGCAGATTTTGGACAC...TGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TCCTATGTACACCACCTCCCCTTCGGCCCTGAGGTCAGTGGCCAGAGTCGGGTGGTGTCCAAAATCTGCTaGACCAGGTGTTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: SYVHHLPFGPEVSGQSRVVSKIC*TRCSTE
Trigger: CTCTGTAGAACACCTGGTGCAGCAGATTTTGGACAC...CACCCGACTCTGGCCACTGACCTCAGGGCCGAAGGGGAGGTGGTGTACATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCAGGGGGCAGAAGGCTCAGTaGCTACAACCACTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: VEQINKASQEGAESGAGRGQKAQ*LQPLPN
Trigger: GTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCC...CCTGCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCCCGGCCGTGCAGCCCTCCCCGCGGCGCCTTAAATAGATTCTTCACTATACTCATCCGCTTCTCCATCTaGTCCAGTCGCTCTAGTATG +
Preference number: 4 (lower is better)
Translates to: ARPCSPPRGALNRFFTILIRFSI*SSRSSM
Trigger: CATACTAGAGCGACTGGAGCAGATGGAGAAGCGGAT...GAGTATAGTGAAGAATCTATTTAAGGCGCCGCGGGGAGGGCTGCACGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGAACATCCGCTTCTCCATCTaGTCCAGTCGCTCTAGTATG +
Preference number: 4 (lower is better)
Translates to: AAKAVVGTEADTFRDASNIRFSI*SSRSSM
Trigger: CATACTAGAGCGACTGGAGCAGATGGAGAAGCGGAT...GTTCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGCAATTCGTATAAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCACCTGCCCAGCTGCTaGGATCTCTGCCATCCGCTT +
Preference number: 4 (lower is better)
Translates to: GNSYKPSPCTSRKCPWSRHLPSC*DLCHPL
Trigger: AAGCGGATGGCAGAGATCGCAGCAGCTGGGCAGGTG...CCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp ATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGAGGCACCTGCCCAGCTaGTGCGATCTCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: IQRRVEQINKASQEGAESRHLPS*CDLCHP
Trigger: CGGATGGCAGAGATCGCAGCAGCTGGGCAGGTGCCT...CGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCGCAGCGAAGGCAGTGGTGGGAACCGAGGCGGATACATTCAGAGACGCGTCGATGGAGCGTGGGATCATaGTTTCTACCAAGACCACTA +
Preference number: 4 (lower is better)
Translates to: AQRRQWWEPRRIHSETRRWSVGS*FLPRPL
Trigger: TAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCA...TCGACGCGTCTCTGAATGTATCCGCCTCGGTTCCCACCACTGCCTTCGCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGGAGGTCACAGCGGAAGATGCAGGTATGTGGGGCGCGGGTTTTCTGGAGCCAGTGGAGCGTGGGATCATaGTTTCTACCAAGACCACTA +
Preference number: 4 (lower is better)
Translates to: RRSQRKMQVCGARVFWSQWSVGS*FLPRPL
Trigger: TAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCA...CTGGCTCCAGAAAACCCGCGCCCCACATACCTGCATCTTCCGCTGTGACCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GGATACATTCAGAGACGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCTGGGCAGCAGCCAGGTaGAGAAGGCTCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GYIQRRVEQINKASQEGAWAAAR*RRLMPR
Trigger: CCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCA...GGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AAACCAAGCCCATGCACAAGTAGAAAGTGCCCGTGGAGCCGGCAGGAGGCCCCCGTGGCTTCGATGATCTaGTTGGCTAGTGAGATCATG +
Preference number: 4 (lower is better)
Translates to: KPSPCTSRKCPWSRQEAPVASMI*LASEIM
Trigger: CATGATCTCACTAGCCAAGCAGATCATCGAAGCCAC...GGGGGCCTCCTGCCGGCTCCACGGGCACTTTCTACTTGTGCATGGGCTTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp AGGAGGCCTACAGAGGGCTCCAACAAAGGTGAACAGGAAAGCTGCCGACAGGGGCTTGCCACTGGTGGATaGAGAGAGAAACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRPTEGSNKGEQESCRQGLATGG*REKLCP
Trigger: TGGGCAGAGTTTCTCTCTGCATCCACCAGTGGCAAG...CCCCTGTCGGCAGCTTTCCTGTTCACCTTTGTTGGAGCCCTCTGTAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp GCAAACATGCGGAGTCGGGTGGGGACACGGTCAGCCCTGAAACACGAGGGGCGTAATCACTTTCCATCTTaGCACTGGTGGATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ANMRSRVGTRSALKHEGRNHFPS*HWWMQR
Trigger: TCTCTGCATCCACCAGTGGCAAGATGGAAAGTGATT...ACGCCCCTCGTGTTTCAGGGCTGACCGTGTCCCCACCCGACTCCGCATGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp TTCTTCACTATACTCTGTATGTTACAGTATGTACAAGACCCCTCCCCTCGGGGGGCTGCTACCTCCTGCTaGTCCTTCAGCCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: FFTILCMLQYVQDPSPRGAATSC*SFSRRP
Trigger: GGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAGCAGC...CCCCCGAGGGGAGGGGTCTTGTACATACTGTAACATACAGAGTATAGTGAAGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000348066.8
ENST00000361571.9
ENST00000381311.9
ENST00000414043.7
ENST00000572543.5
ENST00000574951.5
CDS-3UTR GCA 90 bp CGCGTCGAACAAATAAATAAGGCAAGTCAGGAGGGGGCCGAGTCGGGTGCAGGCCTGGATTACAGCTGCTaGTACCTCCTGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RVEQINKASQEGAESGAGLDYSC*YLLLLL
Trigger: AAGGAGCAGCAGGAGGTAGCAGCAGCTGTAATCCAG...GCCTGCACCCGACTCGGCCCCCTCCTGACTTGCCTTATTTATTTGTTCGACGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348066.8