RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMTA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171735

Ensembl transcript IDs: ENST00000303635.12, ENST00000461311.1, ENST00000461580.5, ENST00000467267.1, ENST00000467404.6, ENST00000470648.5, ENST00000472283.1, ENST00000473578.5, ENST00000476864.1, ENST00000482934.1, ENST00000486138.1, ENST00000490905.5, ENST00000495233.5, ENST00000557126.5

Found 741 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCAGGTGCTAGGAAGAAAAAGGCAGCTTGCTGAGGGGACAGAGTaGCATCATGGATGGTCACGGAGGCCTCTGGACCAGGAGGCGTGT +
Preference number: 1 (lower is better)
Translates to: GQVLGRKRQLAEGTE*HHGWSRRPLDQEAC
Trigger: ACACGCCTCCTGGTCCAGAGGCCTCCGTGACCATCCATGATGCCACTCTGTCCCCTCAGCAAGCTGCCTTTTTCTTCCTAGCACCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR GCA 90 bp GTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGTGGTGAGAGCCAAGGTAATGCAGGT +
Preference number: 1 (lower is better)
Translates to: VSALMAPALWIPLLC*AHEQVCGESQGNAG
Trigger: ACCTGCATTACCTTGGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461311.1
3UTR GCA 90 bp CCAGACATGGGGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTaGCAGCTTTCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCT +
Preference number: 1 (lower is better)
Translates to: PDMGLAGWESSPYEF*QLSFQCVSPHGSSS
Trigger: AGAGCTGGAGCCATGAGGGCTGACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCCCATGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR CCA 90 bp GCCAGCTTTCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTaGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGGTGAG +
Preference number: 1 (lower is better)
Translates to: ASFHSNVSALMAPAL*IPLLCCAHEQVCGE
Trigger: CTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGAAAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR GCA 90 bp AATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTaGTGCGCCCATGAACAAGTGTGTGGTGAGAGCCAAGGTAATGCA +
Preference number: 1 (lower is better)
Translates to: NVSALMAPALWIPLL*CAHEQVCGESQGNA
Trigger: TGCATTACCTTGGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461311.1
3UTR CCA 90 bp TCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTCAGCCCTCATaGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAAC +
Preference number: 1 (lower is better)
Translates to: SLRILPAFIPMCQPS*LQLCGSLFFAAPMN
Trigger: GTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR TCA 90 bp GCCCTGCTCTCATGGAGCTTCCATTCTGATGAGACAGGTGGTAACTaGCTGGAAAACATACCACCGCTGGGGCAGGTGCTAGGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: ALLSWSFHSDETGGN*LENIPPLGQVLGRK
Trigger: TTTTCTTCCTAGCACCTGCCCCAGCGGTGGTATGTTTTCCAGTCAGTTACCACCTGTCTCATCAGAATGGAAGCTCCATGAGAGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR GCA 90 bp CCCCATTGGGCGCCAACTACTGTGTGGAACTGCCATAAGCGACCGTaGAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACA +
Preference number: 1 (lower is better)
Translates to: PHWAPTTVWNCHKRP*SQRGVRIIVFISFT
Trigger: TGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCACGGTCGCTTATGGCAGTTCCACACAGTAGTTGGCGCCCAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR CCA 90 bp AAGATTCATAACCAAGAAAAAGCGGTCAGAAATGCTTCGTTTCAGTaGAAGTGCATTTTTGCCTCGCCTAGGATTCACAGTTGTACTGGT +
Preference number: 1 (lower is better)
Translates to: KIHNQEKAVRNASFQ*KCIFASPRIHSCTG
Trigger: ACCAGTACAACTGTGAATCCTAGGCGAGGCAAAAATGCACTTCCACTGAAACGAAGCATTTCTGACCGCTTTTTCTTGGTTATGAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR TCA 90 bp TTCATTTCTACCTTCTATATATACACAGAAACTGCTCAGTTTGGATaGGATATAGCCAAAAACATGGAATTTACTGGCCAGAACGCAGCA +
Preference number: 1 (lower is better)
Translates to: FISTFYIYTETAQFG*DIAKNMEFTGQNAA
Trigger: TGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGGCTATATCTCATCCAAACTGAGCAGTTTCTGTGTATATATAGAAGGTAGAAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR CCA 90 bp GCTTTACACCAACTGATCCTCAGACGTAACCTGGGAATTTTAAACTaGCATCAGCAAATACGAACTTTATTCTCTCAATTTAACATTAGC +
Preference number: 1 (lower is better)
Translates to: ALHQLILRRNLGILN*HQQIRTLFSQFNIS
Trigger: GCTAATGTTAAATTGAGAGAATAAAGTTCGTATTTGCTGATGCCAGTTTAAAATTCCCAGGTTACGTCTGAGGATCAGTTGGTGTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp CAAGGGGACAAGACAAAGGCCCTGCTCTCATGGAGCTTCCATTCTGATGAGACAAGCCAGACATGGGGCTaGCAGGATGGGAAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: QGDKTKALLSWSFHSDETSQTWG*QDGKAL
Trigger: GAGAGCTTTCCCATCCTGCCAGCCCCATGTCTGGCT...TGTCTCATCAGAATGGAAGCTCCATGAGAGCAGGGCCTTTGTCTTGTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR-3UTR GCA 90 bp AGAAAAAGGCAGCTTGCTGAGGGGACAGAGTGGCATCATGGATGGTCACGGAGGATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: RKRQLAEGTEWHHGWSRRIPLLC*AHEQVC
Trigger: ACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGAT...CCTCCGTGACCATCCATGATGCCACTCTGTCCCCTCAGCAAGCTGCCTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR-3UTR TCA 90 bp TCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCTCAGACAGCAGCTTCTaGCTTGTTTTCCATTGCTCT +
Preference number: 2 (lower is better)
Translates to: SNVSALMAPALWIPLLCCSDSSF*LVFHCS
Trigger: AGAGCAATGGAAAACAAGTCAGAAGCTGCTGTCTGA...GCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR-3UTR CCA 90 bp GGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTCAGCATGGCTCCAGCTCTGTaGATCCCTCTTCTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: GWESSPYEFCQLSFQCVSMAPAL*IPLLCC
Trigger: GCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCAT...GCTGACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR-3UTR GCA 90 bp AAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTCAGCCCTCATGGTGGATCCCTCTTCTTTaGTGCGCCCATGAACAAGTG +
Preference number: 2 (lower is better)
Translates to: KLSLRILPAFIPMCQPSWWIPLL*CAHEQV
Trigger: CACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCA...CCATGAGGGCTGACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCACCCTCGCAGGTTCTTaGAAGGTGGTGGGGACAAGA +
Preference number: 2 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSTLAGS*KVVGTR
Trigger: TCTTGTCCCCACCACCTTCCAAGAACCTGCGAGGGT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp TGCTCTCATGGAGCTTCCATTCTGATGAGACAGGTGGTAACTGACTGGAAAACAATGGCTCCAGCTCTGTaGATCCCTCTTCTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: CSHGASILMRQVVTDWKTMAPAL*IPLLCC
Trigger: GCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCAT...TGTTTTCCAGTCAGTTACCACCTGTCTCATCAGAATGGAAGCTCCATGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGAAACATGGAATTTACTaGCCAGAACGCAGCACCACA +
Preference number: 2 (lower is better)
Translates to: VQVATSCGAVTVVKADHKKHGIY*PERSTT
Trigger: TGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR CAA 90 bp GGAACTGCCATAAGCGACCGTGCAGCCAGAGAGGGGTTCGTATTATaGTCTTTATTTCGTTCACACAGTACAGCTGATTTCGAATGGGTA +
Preference number: 2 (lower is better)
Translates to: GTAISDRAAREGFVL*SLFRSHSTADFEWV
Trigger: TACCCATTCGAAATCAGCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCACGGTCGCTTATGGCAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCTTCACAACAAGCCTTaGGTTTTAACTCACAGTTGG +
Preference number: 2 (lower is better)
Translates to: VQVATSCGAVTVVKADHKLHNKP*VLTHSW
Trigger: CCAACTGTGAGTTAAAACTCAAGGCTTGTTGTGAAG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp GCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTCAAATACGAGTTCCTCTaGAATCAGACAGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: AGWESSPYEFCQLSFQCVKYEFL*NQTAAS
Trigger: AGAAGCTGCTGTCTGATTCCAGAGGAACTCGTATTT...GACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGATCCAACAGAAGATTaGGTTCCAAGATGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIDPTED*VPRCLA
Trigger: AGCAAGACATCTTGGAACTCAATCTTCTGTTGGATC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGAATACAGCCCTATATaGGAAGGAAATGGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIEYSPI*EGNGFF
Trigger: GAAGAAGCCATTTCCTTCTCATATAGGGCTGTATTC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGTTCCACACGATGTTTaGATACAGCCCTATATGAGA +
Preference number: 2 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIVPHDV*IQPYMR
Trigger: TCTCATATAGGGCTGTATTCAAACATCGTGTGGAAC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTCCAGGCAAGGTTCATaGTTCCTTAGAATTACTACA +
Preference number: 2 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSRQGS*FLRITT
Trigger: TGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTACACACCTGCCCCTCTaGAAATTTCCACAAGACATT +
Preference number: 2 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGTHLPL*KFPQDI
Trigger: AATGTCTTGTGGAAATTTGCAGAGGGGCAGGTGTGT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAACCCTCGCAGGTTCTTaGAAGGTGGTGGGGACAAGA +
Preference number: 2 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLTLAGS*KVVGTR
Trigger: TCTTGTCCCCACCACCTTCCAAGAACCTGCGAGGGT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGTTTTAACTCACAGTTaGCAGCCAGAACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: VQVATSCGAVTVVKADHKVLTHS*QPEPRK
Trigger: TTTTCTTGGTTCTGGCTGCCAACTGTGAGTTAAAAC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATTCCTCCTGGGTGTCTTaGTTTCCCGTGATCCAACAG +
Preference number: 2 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYSSWVS*FPVIQQ
Trigger: CTGTTGGATCACGGGAAATCAAGACACCCAGGAGGA...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR TCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCAACGCAGCACCACACTaGTCGTTTAGGTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCNAAPH*SFRWQM
Trigger: CATTTGCCACCTAAACGATCAGTGTGGTGCTGCGTT...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR TCA 90 bp TGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCAGACATTCAACTATTGCTGTTCCCATaGTCATCTTCTATAGGTGGC +
Preference number: 2 (lower is better)
Translates to: CSSGASLLVNLNISADIQLLLFP*SSSIGG
Trigger: GCCACCTATAGAAGATGATCATGGGAACAGCAATAG...TTGAATGTCTGCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
3UTR-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCAGGTATCTGGGGGACTaGAACAGCTGCAACATAACC +
Preference number: 2 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCRYLGD*NSCNIT
Trigger: GGTTATGTTGCAGCTGTTGCAGTCCCCCAGATACCT...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCAGCTTTACACCAACTaGTCCTCAGACGTAACCTGG +
Preference number: 2 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYQLYTN*SSDVTW
Trigger: CCAGGTTACGTCTGAGGATCAGTTGGTGTAAAGCTG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCGTGTGTGTTGTTGTTaGATGTCTCTGCTAAAAACA +
Preference number: 2 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGRVCCC*MSLLKT
Trigger: TGTTTTTAGCAGAGACATGCAACAACAACACACACG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACGTTTACCACACACCTaGCCCTCTGCAAATTTCCAC +
Preference number: 2 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRLPHT*PSANFH
Trigger: GTGGAAATTTGCAGAGGGGCAGGTGTGTGGTAAACG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CCA 90 bp TTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCAGACATATCATCTTCTATAGGTaGCACGGTGTTGAGAACACA +
Preference number: 2 (lower is better)
Translates to: LVFQRCLSFGKLEHFGRHIIFYR*HGVENT
Trigger: TGTGTTCTCAACACCGTGCCACCTATAGAAGATGAT...ATGTCTGCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
3UTR-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATCCTCCTGGGTGTCTTaGTTTCCCGTGATCCAACAG +
Preference number: 2 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESSWVS*FPVIQQ
Trigger: CTGTTGGATCACGGGAAATCAAGACACCCAGGAGGA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTCTCATTATTTCCCATaGATTACCCGTTTACCACAC +
Preference number: 2 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSSHYFP*ITRLPH
Trigger: GTGTGGTAAACGGGTAATGCATGGGAAATAATGAGA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATTACAAATGTACAGGTaGCTACTAGTTGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQLQMYR*LLVVGL
Trigger: CAGCCCCACAACTAGTAGCCACCTGTACATTTGTAA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATTGTTCTTTGTTGGAGTaGGTGGATGGTGTTAAGCTA +
Preference number: 2 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYCSLLE*VDGVKL
Trigger: TAGCTTAACACCATCCACTCACTCCAACAAAGAACA...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR GCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGAAATAACCGGCAGGTaGAGGAACAGCATTCTTTTT +
Preference number: 2 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYEITGR*RNSILF
Trigger: AAAAAGAATGCTGTTCCTGCACCTGCCGGTTATTTC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCTTTGTTGGAGTGAGTaGATGGTGTTAAGCTACATA +
Preference number: 2 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCLCWSE*MVLSYI
Trigger: TATGTAGCTTAACACCATCCACTCACTCCAACAAAG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCAACATCAGATTTCTTTaGCTCCTCATTATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSNIRFL*LLIMWK
Trigger: TTTCCACATAATGAGGAGCCAAAGAAATCTGATGTT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCACCCTCTTAATTCTATaGAAGTCTCTACCATCTGTC +
Preference number: 2 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCTLLIL*KSLPSV
Trigger: GACAGATGGTAGAGACTTCCATAGAATTAAGAGGGT...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACGTGTGTGTTGTTGTTaGATGTCTCTGCTAAAAACA +
Preference number: 2 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRVCCC*MSLLKT
Trigger: TGTTTTTAGCAGAGACATGCAACAACAACACACACG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATCTCATTATTTCCCATaGATTACCCGTTTACCACAC +
Preference number: 2 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSHYFP*ITRLPH
Trigger: GTGTGGTAAACGGGTAATGCATGGGAAATAATGAGA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCTGGGAATTTTAAACTaGCATCAGCAAATACGAACT +
Preference number: 2 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCLGILN*HQQIRT
Trigger: AGTTCGTATTTGCTGATGCCAGTTTAAAATTCCCAG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATTCCAGCAGGAGATATaGAAACGTGACATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQFQQEI*KRDIFL
Trigger: TAGAAAAATGTCACGTTTCCATATCTCCTGCTGGAA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACGTGTGTGTTGTTGTTaGATGTCTCTGCTAAAAACA +
Preference number: 2 (lower is better)
Translates to: KYLYSSTRCLNTALYEKERVCCC*MSLLKT
Trigger: TGTTTTTAGCAGAGACATGCAACAACAACACACACG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR CCA 72 bp CTAGGAAGAAAAAGGCAGCTTGCTGAGGGGACAGAGTaGCATCATGGATGGTCACGGAGGCCTCTGGACCAG +
Preference number: 3 (lower is better)
Translates to: LGRKRQLAEGTE*HHGWSRRPLDQ
Trigger: CTGGTCCAGAGGCCTCCGTGACCATCCATGATGCCACTCTGTCCCCTCAGCAAGCTGCCTTTTTCTTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR GCA 72 bp CTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGTGGTGAGAGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: LMAPALWIPLLC*AHEQVCGESQG
Trigger: ACCTTGGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461311.1
3UTR GCA 72 bp GGGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTaGCAGCTTTCATTCCAATGTGTCAGCCCTCATGGC +
Preference number: 3 (lower is better)
Translates to: GLAGWESSPYEF*QLSFQCVSPHG
Trigger: GCCATGAGGGCTGACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR CCA 72 bp CATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTaGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTG +
Preference number: 3 (lower is better)
Translates to: HSNVSALMAPAL*IPLLCCAHEQV
Trigger: CACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR CCA 72 bp ATTCTGCCAGCTTTCATTCCAATGTGTCAGCCCTCATaGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCG +
Preference number: 3 (lower is better)
Translates to: ILPAFIPMCQPS*LQLCGSLFFAA
Trigger: CGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGAAAGCTGGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
3UTR TCA 72 bp TCATGGAGCTTCCATTCTGATGAGACAGGTGGTAACTaGCTGGAAAACATACCACCGCTGGGGCAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: SWSFHSDETGGN*LENIPPLGQVL
Trigger: TAGCACCTGCCCCAGCGGTGGTATGTTTTCCAGTCAGTTACCACCTGTCTCATCAGAATGGAAGCTCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR GCA 72 bp CTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGTGGTGAGAGCATTTTT +
Preference number: 3 (lower is better)
Translates to: LMAPALWIPLLC*AHEQVCGESIF
Trigger: AAAAATGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR GCA 72 bp GCGCCAACTACTGTGTGGAACTGCCATAAGCGACCGTaGAGCCAGAGAGGGGTTCGTATTATTGTCTTTATT +
Preference number: 3 (lower is better)
Translates to: APTTVWNCHKRP*SQRGVRIIVFI
Trigger: AATAAAGACAATAATACGAACCCCTCTCTGGCTGCACGGTCGCTTATGGCAGTTCCACACAGTAGTTGGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR TCA 72 bp AACATGGAATTTACTGGCCAGAACGCAGCACCACACTaGTCGTTTAGGTGGCAAATGTCCAGGCAAGGTTCA +
Preference number: 3 (lower is better)
Translates to: NMEFTGQNAAPH*SFRWQMSRQGS
Trigger: TGAACCTTGCCTGGACATTTGCCACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAACTGCAGAGGGATTTaGTATGTGTGTGTACGTGTG +
Preference number: 3 (lower is better)
Translates to: QSQRFSFLEITGRCRNSINCRGI*YVCVRV
Trigger: CACACGTACACACACATACAAAATCCCTCTGCAGTT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCAAAGATTCAGCTTCTaGGAAATAACCGGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGQRFSF*EITGRC
Trigger: GCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR GCA 72 bp AGAGGGATTTTGTATGTGTGTGTACGTGTGTGTGTGTaGGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCT +
Preference number: 3 (lower is better)
Translates to: RGILYVCVRVCV*VCACVLLLHVS
Trigger: AGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTACACACACATACAAAATCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTGTGCGTGTGTGTTGTaGTTGCATGTCTCTGCTAAA +
Preference number: 3 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGCACVL*LHVSAK
Trigger: TTTAGCAGAGACATGCAACAACAACACACACGCACA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR TCA 72 bp GAAGAGGAAGCCTCTTTCAATTCCTCCTGGGTGTCTTaGTTTCCCGTGATCCAACAGAAGATTGAGTTCCAA +
Preference number: 3 (lower is better)
Translates to: EEEASFNSSWVS*FPVIQQKIEFQ
Trigger: TTGGAACTCAATCTTCTGTTGGATCACGGGAAATCAAGACACCCAGGAGGAATTGAAAGAGGCTTCCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGTGGGGCTGTCACTGTaGTCAAAGCTGATCACAAGC +
Preference number: 3 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQVGLSL*SKLITS
Trigger: GCTTGTGATCAGCTTTGACAACAGTGACAGCCCCAC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR TCA 72 bp AGTCAGGCTGCGGAGCTCCTTCGTAATAACTCCGGATaGGGCAAGAGTAGGTCACTTTATTCTATTTCATTT +
Preference number: 3 (lower is better)
Translates to: SQAAELLRNNSG*GKSRSLYSISF
Trigger: AAATGAAATAGAATAAAGTGACCTACTCTTGCCTCATCCGGAGTTATTACGAAGGAGCTCCGCAGCCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
3UTR CCA 72 bp ACAAAATGGAGTCAGGTCAGTTTACAAATGTACAGGTaGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: TKWSQVSLQMYR*LLVVGLSLLSK
Trigger: CTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTACATTTGTAAACTGACCTGACTCCATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CAA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATAAAAGCAATGTCACATaGCTAAGGGATGCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYKSNVT*LRDAAV
Trigger: TACAGCAGCATCCCTTAGCAATGTGACATTGCTTTT...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CAA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAAGTTCCACACGATGTTaGAATACAGCCCTATATGAG +
Preference number: 3 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQSSTRC*NTALYE
Trigger: CTCATATAGGGCTGTATTCAAACATCGTGTGGAACT...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAGTTCCACACGATGTTaGAATACAGCCCTATATGAG +
Preference number: 3 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSSTRC*NTALYE
Trigger: CTCATATAGGGCTGTATTCAAACATCGTGTGGAACT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATAGTTTTAACTCACAGTaGGCAGCCAGAACCAAGAAA +
Preference number: 3 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYSFNSQ*AARTKK
Trigger: TTTCTTGGTTCTGGCTGCCAACTGTGAGTTAAAACT...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR-3UTR CAA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGCTTCACAACAAGCCTaGAGTTTTAACTCACAGTTG +
Preference number: 3 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQASQQA*SFNSQL
Trigger: CAACTGTGAGTTAAAACTCAAGGCTTGTTGTGAAGC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR TCA 72 bp CTGGGTGTCTTGATTTCCCGTGATCCAACAGAAGATTaGGTTCCAAGATGTCTTGCTGATCAAATTAAAAGT +
Preference number: 3 (lower is better)
Translates to: LGVLISRDPTED*VPRCLADQIKS
Trigger: ACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAATCTTCTGTTGGATCACGGGAAATCAAGACACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGCGTGTGTGTTGTTGTaGCATGTCTCTGCTAAAAAC +
Preference number: 3 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAACVLL*HVSAKN
Trigger: GTTTTTAGCAGAGACATGCAACAACAACACACACGC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATGTGCGTGTGTGTTGTaGTTGCATGTCTCTGCTAAA +
Preference number: 3 (lower is better)
Translates to: IEFQDVLLIKLKVVHESACACVL*LHVSAK
Trigger: TTTAGCAGAGACATGCAACAACAACACACACGCACA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR TCA 72 bp ACCTTCTATATATACACAGAAACTGCTCAGTTTGGATaGGATATAGCCAAAAACATGGAATTTACTGGCCAG +
Preference number: 3 (lower is better)
Translates to: TFYIYTETAQFG*DIAKNMEFTGQ
Trigger: CTGGCCAGTAAATTCCATGTTTTTGGCTATATCTCATCCAAACTGAGCAGTTTCTGTGTATATATAGAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
3UTR TCA 72 bp TTATTTGTGAATATTTTTAGGCTTCACAACAAGCCTTaGGTTTTAACTCACAGTTGGCAGCCAGAACCAAGA +
Preference number: 3 (lower is better)
Translates to: LFVNIFRLHNKP*VLTHSWQPEPR
Trigger: TCTTGGTTCTGGCTGCCAACTGTGAGTTAAAACTCAAGGCTTGTTGTGAAGCCTAAAAATATTCACAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR TCA 72 bp CCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATaGAAGTGCAAATGCAATGACCAAAACATTCCTGTT +
Preference number: 3 (lower is better)
Translates to: PRCLADQIKSCP*KCKCNDQNIPV
Trigger: AACAGGAATGTTTTGGTCATTGCATTTGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCGTTGCCCGGGAGGATaGGGACGCCGCCGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSARCPGG*GRRRRF
Trigger: GAAGCGCCGGCGGCGTCCCCATCCTCCCGGGCAACG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTGGGGCCGCAAGGCTTaGCGCAGTCCTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKWGRKA*RSPRWP
Trigger: CGGCCATCGAGGACTGCGGCAAGCCTTGCGGCCCCA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGGTGAGAGGAGGTGGTaGTTGGGGCCAGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKGERRW*LGPAVG
Trigger: CCCCACCGCTGGCCCCAACCACCACCTCCTCTCACC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGAGGCGTTGCCGAGGCTaGGCTGGGCCACGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKRRCRG*AGPRGR
Trigger: TCTACCCCGTGGCCCAGCCCAGCCTCGGCAACGCCT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGAGGCACATCTCTGCCTaGGTGAAGGGGGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKRHISA*VKGARA
Trigger: GGCGCGGGCCCCCTTCACCCAGGCAGAGATGTGCCT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTATGCCTAGGGTGCCCTaGGCCGAGGCGGCCGAGACC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIMPRVP*AEAAET
Trigger: GGTCTCGGCCGCCTCGGCCCAGGGCACCCTAGGCAT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCGCCAGCTCCCAGGCTaGCGGTGCAGAGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKRQLPG*RCRGSC
Trigger: ACAACTGCCTCTGCACCGGCAGCCTGGGAGCTGGCG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGGGAGGCACATCTCTaGCTGGGTGAAGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGEAHL*LGEGGP
Trigger: CGGGCCCCCTTCACCCAGGCAGAGATGTGCCTCCCC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGCATGTAGGCCATGGTaGTGGCCCCGCCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIACRPW*WPRPPS
Trigger: GCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTACGGCAGCTTCCAAGTaGCCTAGGGCACACGCCCAC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSATAASK*PRAHAH
Trigger: GTGGGCGTGTGCCCTAGGGCACTTGGAAGCTGCCGT...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTACCTCGGTGCTGCTCTaGTGCAGGAGCACGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSATSVLL*CRSTGL
Trigger: CAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGT...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCAGGGGAGCTCTGGGTaGTGTCGGGGACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAQGSSG*CRGLPP
Trigger: AGGTGGAAGTCCCCGACACCACCCAGAGCTCCCCTG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCACCGTCGAGGGTGGTaGAGAGGACCAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAHRRGW*RGPALR
Trigger: CCGAAGAGCTGGTCCTCTCCACCACCCTCGACGGTG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGGCCACCGTCGAGGGTaGTGGAGAGGACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAGHRRG*WRGPAL
Trigger: AAGAGCTGGTCCTCTCCACCACCCTCGACGGTGGCC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTCGGTCACGGAGGCCTCTaGACCAGGAGGCGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGWESSPYEFCQLSFQCVGHGGL*TRRRVH
Trigger: GTGCACACGCCTCCTGGTCCAGAGGCCTCCGTGACC...GACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGGGCTCAAGCGGATCTaGGCAGCACTGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAGLKRI*AALGRQ
Trigger: CTGCCTTCCCAGTGCTGCCCAGATCCGCTTGAGCCC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490905.5
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTGTGGCCCGTCTGGCTaGAGCTGGACGTGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSACGPSG*SWTCSP
Trigger: AGGACTACACGTCCAGCTTCAGCCAGACGGGCCACA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCCGTGGACGCACCTGTaGAGGTGCTGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKPWTHL*RCCLLS
Trigger: GGAAAGGAGGCAGCACCTTCACAGGTGCGTCCACGG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTGCACTCAGGAATTCTaGCCAATCCGCGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSACTQEF*PIRGGG
Trigger: CCCTCCGCCGCGGATTGGTCAGAATTCCTGAGTGCA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCACGGCTGGAGCCCTTaGTGTGGCTGTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKHGWSP*CGCARA
Trigger: AGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCGACGGGGAGGGGTTTaGTGGCGTCCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKRRGGV*WRPAGR
Trigger: TCTTCCTGCAGGACGCCAGCAAACCCCTCCCCGTCG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTGGGCATCACGAAGGTaGCCCCAGAGTCACTCAGGC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAWASRR*PQSHSG
Trigger: GCCTGAGTGACTCTGGGGGCACCTTCGTGATGCCCA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCCCCGCCCTCCGAGCTaGTCAGCTGCAGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGPRPPS*SAAGYP
Trigger: AGGGTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTGCCGCCTCCACTGCTaGCGCCTCCGCTCGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGCRLHC*RLRSPV
Trigger: AACAGGCGAGCGGAGGCGGCAGCAGTGGAGGCGGCA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCATTCCCGCTCCCGCTaGCGCCTCCACTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSHSRSR*RLHCCR
Trigger: GCGGCAGCAGTGGAGGCGGCAGCGGGAGCGGGAATG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGACACAGGGGAGCTCTaGGTGGTGTCGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKDTGEL*VVSGTS
Trigger: GGAAGTCCCCGACACCACCCAGAGCTCCCCTGTGTC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCAGCGGTGGGGGACATaGTGTACACGGCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAQRWGT*CTRPHW
Trigger: CCAATGAGGCCGTGTACACCATGTCCCCCACCGCTG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCACTCAGGCTGCTGTaGGTGTTCTGCTCGACGGGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASLRLL*VFCSTG
Trigger: CCCCGTCGAGCAGAACACCCACAGCAGCCTGAGTGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGACCGCTGCAGGAGCTaGTTTGGGACGAGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIDRCRS*FGTRPP
Trigger: CGGAGGCCTCGTCCCAAACCAGCTCCTGCAGCGGTC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCCCCTTCTGCCGTCATaGCCTGGAAGTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAPLLPS*PGSWPG
Trigger: TCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTGCAGGCTACCCTGCTaGGGGCTACAGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSICRLPC*GLQQGR
Trigger: CCTCCCCTGCTGTAGCCCCCAGCAGGGTAGCCTGCA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTGTAGGCCATGGTGCTaGCCCCGCCCTCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGCRPWC*PRPPSC
Trigger: GCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTGGGCAGCGGCCAGGTaGAGTAGGGTCATTCCGCGG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIWAAAR*SRVIPR
Trigger: CCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGCTTCGCTGTGCCACTaGGCCATCCAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAASLCH*AIQLSV
Trigger: CACAGAGAGCTGGATGGCCCAGTGGCACAGCGAAGC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGGTATGGGGCTGGCAGGATaGGAAAGCTCTCCCTACGAA +
Preference number: 4 (lower is better)
Translates to: APALWIPLLCCAHEQVCGMGLAG*ESSPYE
Trigger: TTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCCCAT...ACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR CCA 90 bp GCCAGCTTTCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTATGGGGCTGGCAGGATaGGAAAGCTCTCCCTACGAA +
Preference number: 4 (lower is better)
Translates to: ASFHSNVSALMAPALWIPMGLAG*ESSPYE
Trigger: TTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCCCAT...AGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGAAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGCGAGGTCTCCATGGTaGCCTCCCCTTCTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIARSPW*PPLLPS
Trigger: TGACGGCAGAAGGGGAGGTCACCATGGAGACCTCGC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGGGTTCTGTCCCAGCTaGGCCTGCTCATCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKGFCPS*ACSSLC
Trigger: GCAGAGAGATGAGCAGGCTCAGCTGGGACAGAACCC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGGGAGAGTTCCCGGCTaGAGTCCCTCACTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKGRVPG*SPSLLH
Trigger: GTGAAGGAGTGAGGGACTTCAGCCGGGAACTCTCCC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACCACTGTCCTATGCACTaGAGATACAAGGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: QPSWLQLCGSLFFAAPMNHCPMH*RYKGTR
Trigger: TCTTGTCCCCTTGTATCTTCAGTGCATAGGACAGTG...GTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTACTTGTGATGCACGCTaGCGCCAGCTCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSITCDAR*RQLPGC
Trigger: GCAGCCTGGGAGCTGGCGGCAGCGTGCATCACAAGT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGACACGTCATTGTGCTaGACCTCCGAGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKDTSLC*TSEWLP
Trigger: CGGGAGCCACTCGGAGGTGCAGCACAATGACGTGTC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGCTGGGCTCTTCGCTTaGAGGACAGTGGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAAGLFA*RTVDSG
Trigger: CCCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCCATCCAGCTCTCTGTaGTGGGCTCTTCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAPSSSL*WALRLQ
Trigger: CTGCAAGCGAAGAGCCCAGCACAGAGAGCTGGATGG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGCCGTCCGGCGAGCCTaGCGTCTTTTGCCACATTTC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKAVRRA*RLLPHF
Trigger: GAAATGTGGCAAAAGACGGCAGGCTCGCCGGACGGC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGATGGCTCCAGCTCTGTaGATCCCTCTTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WLQLCGSLFFAAPMNKCVMAPAL*IPLLCC
Trigger: GCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCAT...CACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR CCA 90 bp TCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGAGCCAGACATGGGGCTaGCAGGATGGGAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SFQCVSPHGSSSVDPSSLSQTWG*QDGKAL
Trigger: GAGAGCTTTCCCATCCTGCCAGCCCCATGTCTGGCT...CAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR CCA 90 bp GCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGAGCCAGACATGGGGCTaGCAGGATGGGAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AGRMGKLSLRILPAFIPMSQTWG*QDGKAL
Trigger: GAGAGCTTTCCCATCCTGCCAGCCCCATGTCTGGCT...CATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp TTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGGACAGAGTGGCATCATaGATGGTCACGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FQCVSPHGSSSVDPSSLLDRVAS*MVTEAS
Trigger: AGAGGCCTCCGTGACCATCCATGATGCCACTCTGTC...CAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR CCA 90 bp GCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGGCTGAGGGGACAGAGTaGCATCATGGATGGTCACGG +
Preference number: 4 (lower is better)
Translates to: AGRMGKLSLRILPAFIPMAEGTE*HHGWSR
Trigger: CCGTGACCATCCATGATGCCACTCTGTCCCCTCAGC...CATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGCAGCTCCCCAGACTTaGGCAGGACCTCGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGAAPQT*AGPRSL
Trigger: AAGGGAGCGAGGTCCTGCTCAAGTCTGGGGAGCTGC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCAGGGATGCAGGCACTaGGATCTGGTCAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAQGCRH*DLVKQA
Trigger: TGCCTGTTTGACCAGATCTCAGTGCCTGCATCCCTG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGGTGAGAAAAAAGGCAGCTTGCTaGGGGGACAGAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: QLCGSLFFAAPMNKCVVRKKAAC*GDRVAS
Trigger: TGATGCCACTCTGTCCCCTCAGCAAGCTGCCTTTTT...TCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTCCGACACGTCATTGTaGTGCACCTCCGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSDTSL*CTSEWL
Trigger: GAGCCACTCGGAGGTGCAGCACAATGACGTGTCGGA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCGGGCTTGGCCACCTTaGCGTTCCTCTTCTCACGGC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGRAWPP*RSSSHG
Trigger: GCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGCTTCTTTGGCCATCTaGTGCTCGAAGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAASLAI*CSKEVS
Trigger: GGACACCTCCTTCGAGCAGCAGATGGCCAAAGAAGC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGTTTGCTGGCGTCCTaGAGGAAGAAGCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGLLAS*RKKLGE
Trigger: CTCCCCGAGCTTCTTCCTGCAGGACGCCAGCAAACC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCAGAGTCACTCAGGCTaGTGTGGGTGTTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAQSHSG*CGCSAR
Trigger: TCGAGCAGAACACCCACAGCAGCCTGAGTGACTCTG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTCAGAGCTGCAAGCCTaGAGCTCCCCAGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSELQA*SSPDLS
Trigger: GCTCAAGTCTGGGGAGCTGCAGGCTTGCAGCTCTGA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGTAGTGCTCAGAGCTaGAAGCCTGCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGSAQS*KPAAPQ
Trigger: CTGGGGAGCTGCAGGCTTGCAGCTCTGAGCACTACC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCCATGTTGGAGGCGTTaGCGAGGCTGGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSPCWRR*RGWAGP
Trigger: TGGCCCAGCCCAGCCTCGGCAACGCCTCCAACATGG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGCAGCATGCCTAGGGTaGCCTGGGCCGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYAACLG*PGPRRP
Trigger: CGGCCGCCTCGGCCCAGGGCACCCTAGGCATGCTGC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCACCCGTCCGCTCTGCTaGAGCATGCCTAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSTRPLC*SMPRVP
Trigger: GGGCACCCTAGGCATGCTGCAGCAGAGCGGACGGGT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCTCGCCTGTTTGTGCTaGTGGGACCCCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSILACLC*WDPVIS
Trigger: CGAGATGACGGGGTCCCAGCAGCACAAACAGGCGAG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGCCGTCCGGCGAGCCTaGCGTCTTTTGCCACATTTC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIAVRRA*RLLPHF
Trigger: GAAATGTGGCAAAAGACGGCAGGCTCGCCGGACGGC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp GCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGGTTGGATCCCTCTTCTTTaGTGCGCCCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: APALWIPLLCCAHEQVCGWIPLL*CAHEQV
Trigger: CACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCA...ACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGACTTCCACCTGGTTaGTGGAGGAGACCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGLPPG*WRRPRC
Trigger: GCACCGAGGTCTCCTCCACCAACCAGGTGGAAGTCC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCCTCCGTTTTCACCGTaGGCATCACGAAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIPPFSP*ASRRCP
Trigger: GGGGCACCTTCGTGATGCCCACGGTGAAAACGGAGG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTACCAGTGTCATGGGCTaGGCAGTAGCAGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSITSVMG*AVAAQH
Trigger: GTGCTGCGCTGCTACTGCCCAGCCCATGACACTGGT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCGACAGCCAGTCGTGCTaGGAGGAAGGGAGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSDSQSC*EEGSVG
Trigger: GCCCACGCTCCCTTCCTCCCAGCACGACTGGCTGTC...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCATCAGGACACTCATTaGTTCCCGTGGACGCACCTG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAHQDTH*FPWTHL
Trigger: CAGGTGCGTCCACGGGAACCAATGAGTGTCCTGATG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGATCTGGGCAGCACTaGGAAGGCAGTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGSGQH*EGSQHP
Trigger: CGGATGCTGACTGCCTTCCCAGTGCTGCCCAGATCC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTTCCGGAAAGCTGTCTaGACAAGCCTGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAFRKAV*TSLAAS
Trigger: TGAGGCTGCCAGGCTTGTCCAGACAGCTTTCCGGAA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGCGCCAACTACTGTGTaGAACTGCCATAAGCGACCG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAAPTTV*NCHKRP
Trigger: CGGTCGCTTATGGCAGTTCCACACAGTAGTTGGCGC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGATGTGTCAGCCCTCATaGCTCCAGCTCTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: SFQCVSPHGSSSVDPSSLMCQPS*LQLCGS
Trigger: GGATCCACAGAGCTGGAGCCATGAGGGCTGACACAT...CAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR CCA 90 bp GGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATATGTGTCAGCCCTCATaGCTCCAGCTCTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: GWQDGKALPTNSASFHSNMCQPS*LQLCGS
Trigger: GGATCCACAGAGCTGGAGCCATGAGGGCTGACACAT...ATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp GGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATATGGGGCTGGCAGGATaGGAAAGCTCTCCCTACGAA +
Preference number: 4 (lower is better)
Translates to: GWQDGKALPTNSASFHSNMGLAG*ESSPYE
Trigger: TTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCCCAT...ATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp CTGCCAGCTTTCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCAAGGCCCTGCTCTCATaGAGCTTCCATTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LPAFIPMCQPSWLQLCGSKALLS*SFHSDE
Trigger: CTCATCAGAATGGAAGCTCCATGAGAGCAGGGCCTT...GGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGAAAGCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR TCA 90 bp TGCTGCGCCCATGAACAAGTGTGTGGTGAGAGCCAAGGTAATGCAGGTCAGGGGCTATTGCTGTTCCCATaGTCATCTTCTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CCAHEQVCGESQGNAGQGLLLFP*SSSIGG
Trigger: GCCACCTATAGAAGATGATCATGGGAACAGCAATAG...CCCCTGACCTGCATTACCTTGGCTCTCACCACACACTTGTTCATGGGCGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461311.1
CDS-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTTCCACCGAGAAGCCTaGGCTGCTGTTCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKFHREA*AAVPIA
Trigger: AGCAATGGGAACAGCAGCTCAGGCTTCTCGGTGGAA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCCACCTTGGGCGAGATaGTGCGGTGTTTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGPPWAR*CGVWRC
Trigger: ACAGCGCCAAACACCGCATCATCTCGCCCAAGGTGG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGTAGTACTTTTGGATaGGCACAGCAGCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGSTFG*AQQPVG
Trigger: GCCGACGGGCTGCTGTGCTCATCCAAAAGTACTACC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCCTCCTGGGTGTCTTaGTTTCCCGTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASSWVS*FPVIQQ
Trigger: CTGTTGGATCACGGGAAATCAAGACACCCAGGAGGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTGGCTGTCGAGGATCTaGTGCACCAGCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIWLSRI*CTSCST
Trigger: GGTGGAACAGCTGGTGCAGCAGATCCTCGACAGCCA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGTCCCTGCACCACGTTaGCCGGGAGGATGGGGACGC +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCVPAPR*PGGWGR
Trigger: GCGTCCCCATCCTCCCGGGCAACGTGGTGCAGGGAC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGGCAGCTGTAGTTATTaGTGGCTTCTTGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKGSCSY*WLLATG
Trigger: GCCCGTGGCAAGAAGCCAGCAATAACTACAGCTGCC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCCGCTCGCCTGTTTGTaGTGCTGGGACCCCGTCATC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSPLACL*CWDPVI
Trigger: GATGACGGGGTCCCAGCAGCACAAACAGGCGAGCGG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCCCAGAAGCACACTGTaGCTGGCTCCCTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGPRSTL*LAPSIP
Trigger: GGGAATGGAGGGAGCCAGGCACAGTGTGCTTCTGGG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGCTGGGCTCTTCGCTTaGAGGACAGTGGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIAGLFA*RTVDSG
Trigger: CCCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTAGAGGCTTGAAATGCTaGAGTCTCTGGAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSARGLKC*SLWSGR
Trigger: CCTCCCACTCCAGAGACTGCAGCATTTCAAGCCTCT...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCCAGAGGCTTGAAATaGTGCAGTCTCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASRGLK*CSLWSG
Trigger: CCCACTCCAGAGACTGCAGCATTTCAAGCCTCTGGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GGGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGGATCCCTCTTCTTTaGTGCGCCCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: GLAGWESSPYEFCQLSFQWIPLL*CAHEQV
Trigger: CACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCA...TTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp CTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGGTGAGAGCCAACCGCAGAATACACTTTaGGAAACGCTCTTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LWIPLLCCAHEQVCGESQPQNTL*ETLFRL
Trigger: AAGCCGGAAGAGCGTTTCCCAAAGTGTATTCTGCGG...TTGGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461311.1
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTGGATGTGGGGGCTGTaGCCCGTCTGGCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSWMWGL*PVWLKL
Trigger: CAGCTTCAGCCAGACGGGCCACAGCCCCCACATCCA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGGGGTCTGGTGGATGTaGGGGCTGTGGCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCGVWWM*GLWPVW
Trigger: CCAGACGGGCCACAGCCCCCACATCCACCAGACCCC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTGGAACTGCATGAGGTaGAGGGAGGAAGTGGACTCG +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKWNCMR*REEVDS
Trigger: CGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTCTGCCGTCATGGCCTaGAAGTTGGCCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISAVMA*KLAWNC
Trigger: GCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTTCGGATTACCCCGTTaGTCTCCGGCTGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKFGLPR*SPAAGS
Trigger: ACTACCTGCAGCCGGAGACCAACGGGGTAATCCGAA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCTTCACTCCTCCCTCTaGGTAAGACCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKLHSSL*VRPLWG
Trigger: TCCCCAGAGTGGTCTTACCCAGAGGGAGGAGTGAAG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCATGACCCCGTGACCTaGCAATTCCCAAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIHDPVT*QFPKAA
Trigger: GGCTGCCTTTGGGAATTGCCAGGTCACGGGGTCATG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGCATCAGGACACTCATTaGTTCCCGTGGACGCACCTG +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKHQDTH*FPWTHL
Trigger: CAGGTGCGTCCACGGGAACCAATGAGTGTCCTGATG...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATATGGCTCCAGCTCTGTaGATCCCTCTTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWQDGKALPTNSASFHSNMAPAL*IPLLCC
Trigger: GCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCAT...ATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp TTCACTAATAGAACTGTCTTAAAGCCAGACATGGGGCTGGCAGGATGGGAAAGCGAGTGGCATCATGGATaGTCACGGAGGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: FTNRTVLKPDMGLAGWESEWHHG*SRRPLD
Trigger: GTCCAGAGGCCTCCGTGACCATCCATGATGCCACTC...GCTTTCCCATCCTGCCAGCCCCATGTCTGGCTTTAAGACAGTTCTATTAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR TCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGCCAGGACGAGGCCCTaGGAGGCGTCAGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQARTRP*EASGER
Trigger: CCTCTCACCTGACGCCTCTCAGGGCCTCGTCCTGGC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTGGCCTGGAACTGCATaGGGTGGAGGGAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSWPGTA*GGGRKW
Trigger: CCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCCGCGGAAAGTCTTTaGGTGGATCAAGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASAESL*VDQVLG
Trigger: TCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGTATTTCTGGAGAGCTaGTGGCTTCGCTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKVFLES*WLRCAT
Trigger: AGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATAC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCCGAGAAGCCTGAGCTaGTGTTCCCATTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGPRSLS*CSHCCR
Trigger: CCTGCAGCAATGGGAACAGCAGCTCAGGCTTCTCGG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGGCTGTGCTCGTGCTTaGCCTCCGACACGTCATTGT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGGCARA*PPTRHC
Trigger: ACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATCTGCTCCAGGGTGGTaGTGGGACTCAGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQSAPGW*WDSGRR
Trigger: GCGGCGGCCTGAGTCCCAGCACCACCCTGGAGCAGA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCAACGACAGCCAGTCGTaGTGGGAGGAAGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSNDSQS*WEEGSV
Trigger: CACGCTCCCTTCCTCCCAGCACGACTGGCTGTCGTT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCTGATGGCTTCGCTGTaGCACTGGGCCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSLMASL*HWAIQL
Trigger: GAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGCAGCAGCTACTTCTTaGTGTTCCCGCAAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGAAATS*CSRKGR
Trigger: CCGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGACTACTGTGTGGAACTaGCATAAGCGACCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKTTVWN*HKRPCS
Trigger: GCTGCACGGTCGCTTATGGCAGTTCCACACAGTAGT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTGCTAGGAAGAAAAAGGCAGCTTGCTGAGGGGACAGAGTGGCATCATGGATGGATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VLGRKRQLAEGTEWHHGWIPLLC*AHEQVC
Trigger: ACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGAT...CCATCCATGATGCCACTCTGTCCCCTCAGCAAGCTGCCTTTTTCTTCCTAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp GGGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAAATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLAGWESSPYEFCQLSFQIPLLC*AHEQVC
Trigger: ACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGAT...TTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR GCA 90 bp GGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATTGGATCCCTCTTCTTTaGTGCGCCCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: GWQDGKALPTNSASFHSNWIPLL*CAHEQV
Trigger: CACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCA...ATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCCGCAGAATACACTTTaGGAAACGCTCTTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAPQNTL*ETLFRL
Trigger: AAGCCGGAAGAGCGTTTCCCAAAGTGTATTCTGCGG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGCCGCAGAATACACTTTaGGAAACGCTCTTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AGRMGKLSLRILPAFIPMPQNTL*ETLFRL
Trigger: AAGCCGGAAGAGCGTTTCCCAAAGTGTATTCTGCGG...CATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000557126.5
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCTCCAGGGTGGTGCTaGGACTCAGGCCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEAPGWC*DSGRRP
Trigger: CGGGCGGCGGCCTGAGTCCCAGCACCACCCTGGAGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCGTGCATGTAGGCCATaGTGCTGGCCCCGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYRACRP*CWPRPP
Trigger: CGGAGGGCGGGGCCAGCACCATGGCCTACATGCACG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCAGGACAGTGGATTCTaGGGTTCTGTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIQDSGF*GSVPAE
Trigger: CTCAGCTGGGACAGAACCCCAGAATCCACTGTCCTG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCCCTTGGGTATTTCTaGAGAGCTGATGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASLGYF*RADGFA
Trigger: AGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCATCCGCTAGATAACTaGCCAGCCAGCTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAHPLDN*PASSLY
Trigger: GTACAATGAGCTGGCTGGCCAGTTATCTAGCGGATG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTTCCGGAAAGCTGTCTaGACAAGCCTGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIFRKAV*TSLAAS
Trigger: TGAGGCTGCCAGGCTTGTCCAGACAGCTTTCCGGAA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp TTCACTAATAGAACTGTCTTAAAGCCAGACATGGGGCTGGCAGGATGGGAAAGCATGTGTCAGCCCTCATaGCTCCAGCTCTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: FTNRTVLKPDMGLAGWESMCQPS*LQLCGS
Trigger: GGATCCACAGAGCTGGAGCCATGAGGGCTGACACAT...GCTTTCCCATCCTGCCAGCCCCATGTCTGGCTTTAAGACAGTTCTATTAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482934.1
ENST00000557126.5
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCCTTCTTGTCGGTGTTaGTGGAGCAGAGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSPSCRC*WSRGWG
Trigger: GCCCCATCCTCTGCTCCATCAACACCGACAAGAAGG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAACATCTCTGCCTGGGTaGAGGGGGCCCGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESATSLPG*RGPAPR
Trigger: ACGGGGCGCGGGCCCCCTTCACCCAGGCAGAGATGT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CAAGGGGACAAGACAAAGGCCCTGCTCTCATGGAGCTTCCATTCTGATGAGACACGTAATAACTCCGGATaGGGCAAGAGTAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: QGDKTKALLSWSFHSDETRNNSG*GKSRSL
Trigger: AAGTGACCTACTCTTGCCTCATCCGGAGTTATTACG...TGTCTCATCAGAATGGAAGCTCCATGAGAGCAGGGCCTTTGTCTTGTCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR TCA 90 bp TGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGGAGACAGGTGGTAACTaGCTGGAAAACATACCACCG +
Preference number: 4 (lower is better)
Translates to: WQDGKALPTNSASFHSNVETGGN*LENIPP
Trigger: CGGTGGTATGTTTTCCAGTCAGTTACCACCTGTCTC...CACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATCCCCGGGTGGCGAGTaGCGGATGTTGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSPGGE*RMLELT
Trigger: GGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGGTGAGGGAGCTGGCTaGCACAGCCGCCGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEGEGAG*HSRRGG
Trigger: TCCTCCGCGGCGGCTGTGGCAGCCAGCTCCCTCACC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATCCGAGCTGCTCAGCTaGAGGCTACCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSELLS*RLPCWG
Trigger: CCCCCAGCAGGGTAGCCTGCAGCTGAGCAGCTCGGA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCACGGCAGCTTCCAAGTaGCCTAGGGCACACGCCCAC +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCTAASK*PRAHAH
Trigger: GTGGGCGTGTGCCCTAGGGCACTTGGAAGCTGCCGT...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGCCTGCTCATCTCTCTaGAGGTGCTCCAGACACTCT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGACSSL*RCSRHS
Trigger: AGAGTGTCTGGAGCACCTGCAGAGAGATGAGCAGGC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTCCAGAGGCTTGAAATaGTGCAGTCTCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISRGLK*CSLWSG
Trigger: CCCACTCCAGAGACTGCAGCATTTCAAGCCTCTGGA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGAGGTATCTGGGGGACTaGAACAGCTGCAACATAACC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKRYLGD*NSCNIT
Trigger: GGTTATGTTGCAGCTGTTGCAGTCCCCCAGATACCT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AGCCCTGCTCTCCAGAGCTCAGTCAGGCTGCGGAGCTCCTTCGTAATAACTCCGTTTTCCATTGCTCTTTaGACATTTGCTTTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SPALQSSVRLRSSFVITPFSIAL*TFAFCY
Trigger: GTAGCAGAAAGCAAATGTGCAAAGAGCAATGGAAAA...CGGAGTTATTACGAAGGAGCTCCGCAGCCTGACTGAGCTCTGGAGAGCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp GGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GWQDGKALPTNSASFHSNIPLLC*AHEQVC
Trigger: ACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGAT...ATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR GCA 90 bp AGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTCAGCCCTCATGGCGTCAGCACTGTCCTATaGACTGAAGATACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSPYEFCQLSFQCVSPHGVSTVL*TEDTRG
Trigger: TCCCCTTGTATCTTCAGTGCATAGGACAGTGCTGAC...GCCATGAGGGCTGACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR CCA 90 bp TGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGATCATCTTCTATAGGTaGCACGGTGTTGAGAACACA +
Preference number: 4 (lower is better)
Translates to: WLQLCGSLFFAAPMNKCVIIFYR*HGVENT
Trigger: TGTGTTCTCAACACCGTGCCACCTATAGAAGATGAT...CACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461311.1
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCAACACCGTGGCGCTCTaGGACAAGCTCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSNTVAL*DKLPIT
Trigger: TGTGATGGGGAGCTTGTCCCAGAGCGCCACGGTGTT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGGTCAAAGTTCATGGTaGTTTCTGGAATCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAGQSSW*FLESSG
Trigger: GCCGGAAGATTCCAGAAACCACCATGAACTTTGACC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCCACCCCCGTACGTCTaGCCCTGCTTTGGGTTATTA +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGPPPYV*PCFGLL
Trigger: TAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTGGGTAAGACCACTCTaGGGAGTAGTCGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIWVRPL*GVVGHH
Trigger: ATGGTGACCGACTACTCCCCAGAGTGGTCTTACCCA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCCTGTTTGTGCTGCTaGGACCCCGTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCACLCC*DPVISA
Trigger: GGCCGAGATGACGGGGTCCCAGCAGCACAAACAGGC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATGGGCAGCGGCCAGGTaGAGTAGGGTCATTCCGCGG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLWAAAR*SRVIPR
Trigger: CCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTCGCTTGCAGGACAGTaGATTCTGGGGTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGSLAGQ*ILGFCP
Trigger: GGGACAGAACCCCAGAATCCACTGTCCTGCAAGCGA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCTGCAGTCTCTGGAGTaGGAGGGGAGAGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCLQSLE*EGRVPG
Trigger: GCCGGGAACTCTCCCCTCCCACTCCAGAGACTGCAG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCCTCCTTTCCTACACTaGTCCCCTTCGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIPPFLH*SPSDFQ
Trigger: CTGGAAATCCGAAGGGGACCAGTGTAGGAAAGGAGG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTATGCACTTCGGATCTaGGCAGCACTGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGYALRI*AALGRQ
Trigger: CTGCCTTCCCAGTGCTGCCCAGATCCGAAGTGCATA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCTGTCTGGACAAGCCTaGCAGCCTCATAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSILSGQA*QPHRVL
Trigger: GAGAACTCTATGAGGCTGCCAGGCTTGTCCAGACAG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATACCGGACACACCTGTaGCCACCGGGCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQYRTHL*PPGCPP
Trigger: TGGTGGACAGCCCGGTGGTCACAGGTGTGTCCGGTA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCTCATTGGTGACCTCTaGCATGAACACCGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSLIGDL*HEHRGA
Trigger: AGCGCCACGGTGTTCATGTCAGAGGTCACCAATGAG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACCGTGGACGCACCTGTaGAGGTGCTGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLPWTHL*RCCLLS
Trigger: GGAAAGGAGGCAGCACCTTCACAGGTGCGTCCACGG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTCCTCCTGGGTGTCTTaGTTTCCCGTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGSSWVS*FPVIQQ
Trigger: CTGTTGGATCACGGGAAATCAAGACACCCAGGAGGA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAACGCAGCACCACACTaGTCGTTTAGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSINAAPH*SFRWQM
Trigger: CATTTGCCACCTAAACGATCAGTGTGGTGCTGCGTT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCAGCTTTACACCAACTaGTCCTCAGACGTAACCTGG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIQLYTN*SSDVTW
Trigger: CCAGGTTACGTCTGAGGATCAGTTGGTGTAAAGCTG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp TCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGTCAGACAGCAGCTTCTaGCTTGTTTTCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: SFQCVSPHGSSSVDPSSLSDSSF*LVFHCS
Trigger: AGAGCAATGGAAAACAAGTCAGAAGCTGCTGTCTGA...CAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp GGGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATTAGTGTTCCAGCGGTaGCTCTCTTTTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: GLAGWESSPYEFCQLSFQLVFQR*LSFGKL
Trigger: AAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA...TTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCTGTGGCTGTGCTCGTaGTTGCCCTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCLWLCS*LPSDTS
Trigger: TGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATAGGAGACCTCGGTGCTaGTCTGGTGCAGGAGCACGG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYRRPRC*SGAGAR
Trigger: CCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTCCT...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAACAGGCTCTCCGAGCTaGCCGTGGTGGGAAAGGCGA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLTGSPS*PWWERR
Trigger: TCGCCTTTCCCACCACGGGCAGCTCGGAGAGCCTGT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTCTTTGGCCATCTGCTaGTCGAAGGAGGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSSLAIC*SKEVSS
Trigger: CGAGGACACCTCCTTCGAGCAGCAGATGGCCAAAGA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAACTGTGAGAGCGCCGTaGTGTCCCCCGACACCAGCT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLTVRAP*CPPTPA
Trigger: AGCTGGTGTCGGGGGACAGCACGGCGCTCTCACAGT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCAATGCTATCCGCGTaGTTTGTACGCCATTTGATG +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASMLSA*FVRHLM
Trigger: CATCAAATGGCGTACAAAGCACGCGGATAGCATTGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCCAGTTCCAGGTCAATaGTATCCGCGTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIPVPGQ*YPRALY
Trigger: GTACAAAGCACGCGGATAGCATTGACCTGGAACTGG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGTCTCGGGGACAGACTaGTTAGAACTAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGVSGTD*LELGLC
Trigger: GCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGAC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAGAGGCTTGAAATGCTaGAGTCTCTGGAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGRGLKC*SLWSGR
Trigger: CCTCCCACTCCAGAGACTGCAGCATTTCAAGCCTCT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCGTTTACCACACACCTaGCCCTCTGCAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIRLPHT*PSANFH
Trigger: GTGGAAATTTGCAGAGGGGCAGGTGTGTGGTAAACG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCTGGGGCTTGGTCTGGTaGCTGTCGAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCWGLVW*LSRICC
Trigger: GCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCA...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCTCCGCTCCCCGGGTaGCGAGTGCCGGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEAPLPG*RVPDVG
Trigger: TCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCGGGGAGGGGTTTGCTaGCGTCCTGCAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYRGGVC*RPAGRS
Trigger: GCTTCTTCCTGCAGGACGCCAGCAAACCCCTCCCCG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCCTCCTTTCCTACACTaGTCCCCTTCGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGPPFLH*SPSDFQ
Trigger: CTGGAAATCCGAAGGGGACCAGTGTAGGAAAGGAGG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCCTGTATGTCATCCATaGGCTGGCCGCATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIPVCHP*AGRILH
Trigger: ATGAAGAATGCGGCCAGCCCATGGATGACATACAGG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGGATCTGGGCAGCACTaGGAAGGCAGTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCGSGQH*EGSQHP
Trigger: CGGATGCTGACTGCCTTCCCAGTGCTGCCCAGATCC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCTGTCTGGACAAGCCTaGCAGCCTCATAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGLSGQA*QPHRVL
Trigger: GAGAACTCTATGAGGCTGCCAGGCTTGTCCAGACAG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATTCCACCAGGGGGCTGTaGCGACAGCGGCGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYSTRGL*RQRRRN
Trigger: GTTTCTTCGCCGCTGTCGCCACAGCCCCCTGGTGGA...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR CAA 72 bp CCCTCCACTGAGAATCAGTCCCAAAGATTCAGCTTCTaGGAAATAACCGGCAGGTGCAGGAACAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: PSTENQSQRFSF*EITGRCRNSIL
Trigger: AAGAATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTGATTCTCAGTGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp TGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGCTATTGCTGTTCCCATaGTCATCTTCTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WQDGKALPTNSASFHSNVLLLFP*SSSIGG
Trigger: GCCACCTATAGAAGATGATCATGGGAACAGCAATAG...CACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000557126.5
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGTTGTAGAGTATCATTaGGCCATTCTGTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAVVEYH*AILWSC
Trigger: ACAAGACCACAGAATGGCTCAATGATACTCTACAAC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATTGGAGTCGATGGCGCTaGAGTCCATCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYWSRWR*SPSAPG
Trigger: CCCTGGAGCAGATGGACTTCAGCGCCATCGACTCCA...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTTTCACATGACCCCGTaGCCTGGCAATTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSFHMTP*PGNSQR
Trigger: CCTTTGGGAATTGCCAGGTCACGGGGTCATGTGAAA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGGGTTCTGTCCCAGCTaGGCCTGCTCATCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLGFCPS*ACSSLC
Trigger: GCAGAGAGATGAGCAGGCTCAGCTGGGACAGAACCC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTGTTCTTTCCAATCCTaGGGACTCCATGGGCACAAA +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSICSFQS*GLHGHK
Trigger: TTTGTGCCCATGGAGTCCTCAGGATTGGAAAGAACA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATGCACTCAGGAATTCTaGCCAATCCGCGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQCTQEF*PIRGGG
Trigger: CCCTCCGCCGCGGATTGGTCAGAATTCCTGAGTGCA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATGCACTCAGGAATTCTaGCCAATCCGCGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLCTQEF*PIRGGG
Trigger: CCCTCCGCCGCGGATTGGTCAGAATTCCTGAGTGCA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTCAGACAGAGTGAGCTaGGCAAACTCATTCTCTACC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISDRVS*ANSFST
Trigger: GGTAGAGAATGAGTTTGCTCAGCTCACTCTGTCTGA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAACGCAGCACCACACTaGTCGTTTAGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGNAAPH*SFRWQM
Trigger: CATTTGCCACCTAAACGATCAGTGTGGTGCTGCGTT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTGTTCTTTGTTGGAGTaGGTGGATGGTGTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSACSLLE*VDGVKL
Trigger: TAGCTTAACACCATCCACTCACTCCAACAAAGAACA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATTTAGTGTTCCAGCGGTaGCTCTCTTTTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: GWQDGKALPTNSASFHSNLVFQR*LSFGKL
Trigger: AAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA...ATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR GCA 90 bp CAAGGGGACAAGACAAAGGCCCTGCTCTCATGGAGCTTCCATTCTGATGAGACATTAGTGTTCCAGCGGTaGCTCTCTTTTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: QGDKTKALLSWSFHSDETLVFQR*LSFGKL
Trigger: AAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA...TGTCTCATCAGAATGGAAGCTCCATGAGAGCAGGGCCTTTGTCTTGTCCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTCCCAGGCTGCCGGTaGAGAGGCAGTTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELPGCR*RGSCGS
Trigger: GGACCCACAACTGCCTCTGCACCGGCAGCCTGGGAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCCGTACGTCTGGCCCTaGTTTGGGTTATTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIPYVWP*FGLLRK
Trigger: TTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGCGCTGAAGTCCATCTaGTCCAGGGTGGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYALKSI*SRVVLG
Trigger: TCCCAGCACCACCCTGGAGCAGATGGACTTCAGCGC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTCCCTTCCGCCGCCTaGGAGGTCTCCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELPSAA*EVSMVT
Trigger: GGTCACCATGGAGACCTCGCAGGCGGCGGAAGGGAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAGCTGCAGGCTACCCTaGTGGGGGCTACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASCRLP*WGLQQG
Trigger: CCCCTGCTGTAGCCCCCAGCAGGGTAGCCTGCAGCT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGGCACAAAATTCTCCTaGTTGATTCGGTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIGTKFS*LIRSGV
Trigger: CACACCTGACCGAATCAAGCAGGAGAATTTTGTGCC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp GCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTCTCCCTACGAATTCTaGCAGCTTTCATTCCAATGT +
Preference number: 4 (lower is better)
Translates to: AGRMGKLSLRILPAFIPMSPYEF*QLSFQC
Trigger: ACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGA...CATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR GCA 90 bp TCATTCCAATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGTCTCCCTACGAATTCTaGCAGCTTTCATTCCAATGT +
Preference number: 4 (lower is better)
Translates to: SFQCVSPHGSSSVDPSSLSPYEF*QLSFQC
Trigger: ACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGA...CAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATTGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACTTCCACCTGGTTGGTaGAGGAGACCTCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLLPPGW*RRPRCC
Trigger: GCAGCACCGAGGTCTCCTCCACCAACCAGGTGGAAG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGGTTGGGGCCAGCGGTaGGGGACATGGTGTACACGG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAGWGQR*GTWCTR
Trigger: CCGTGTACACCATGTCCCCCACCGCTGGCCCCAACC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGCTCTTCGGACACGTTaGTGGGCAGCATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYALRTR*WAAWTG
Trigger: GCCTGTCCATGCTGCCCACCAACGTGTCCGAAGAGC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCGTTCATGGTGGTTTCTaGAATCTTCCGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSVHGGF*NLPATV
Trigger: GACGGTGGCCGGAAGATTCCAGAAACCACCATGAAC...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGGTGGAGGGAGGAAGTaGACTCGATCCGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQGGGRK*TRSASP
Trigger: TGGAGACGCGGATCGAGTCCACTTCCTCCCTCCACC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCAGCTGTAGTTATTGCTaGCTTCTTGCCACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSSCSYC*LLATGL
Trigger: CAGGCCCGTGGCAAGAAGCCAGCAATAACTACAGCT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGGGAGGAAGGGAGCGTaGGCAGAGCCCGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAGRKGA*AEPGLC
Trigger: ACAAAGCCCGGGCTCTGCCCACGCTCCCTTCCTCCC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGAAGCACACTGTGCCTaGCTCCCTCCATTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYEAHCA*LPPFPL
Trigger: GAGCGGGAATGGAGGGAGCCAGGCACAGTGTGCTTC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCATCCGCTAGATAACTaGCCAGCCAGCTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGHPLDN*PASSLY
Trigger: GTACAATGAGCTGGCTGGCCAGTTATCTAGCGGATG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGGATCTGGGCAGCACTaGGAAGGCAGTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLGSGQH*EGSQHP
Trigger: CGGATGCTGACTGCCTTCCCAGTGCTGCCCAGATCC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCCTGTCTGGACAAGCCTaGCAGCCTCATAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSLSGQA*QPHRVL
Trigger: GAGAACTCTATGAGGCTGCCAGGCTTGTCCAGACAG...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCTTCGGAATTTGCTCTaGATAAGGATGGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSILRNLL*IRMAAC
Trigger: ACAGGCTGCCATCCTTATCCAGAGCAAATTCCGAAG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCGTTTCAGCTGCCCGATaGGCTCTTCTTTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSVSAAR*ALLSSI
Trigger: AATGGACGAAAGAAGAGCTCATCGGGCAGCTGAAAC...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCAAAGTGGTCCAGGCTaGGCTCCATGTTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYQSGPG*APCWRR
Trigger: ACGCCTCCAACATGGAGCTCAGCCTGGACCACTTTG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTCTGCTAATTTCACATaGCCCCGTGACCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGSANFT*PRDLAI
Trigger: AATTGCCAGGTCACGGGGTCATGTGAAATTAGCAGA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCGAAAGCGATTTCACTaGCGGGAGAGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYRKRFH*RESQQG
Trigger: GCCCTGTTGGCTCTCCCGTCAGTGAAATCGCTTTCG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACGAAAGCGATTTCACTaGCGGGAGAGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRKRFH*RESQQG
Trigger: GCCCTGTTGGCTCTCCCGTCAGTGAAATCGCTTTCG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTCAGACAGAGTGAGCTaGGCAAACTCATTCTCTACC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGSDRVS*ANSFST
Trigger: GGTAGAGAATGAGTTTGCTCAGCTCACTCTGTCTGA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGGTAGTACTTTTGGATaGGCACAGCAGCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLGSTFG*AQQPVG
Trigger: GCCGACGGGCTGCTGTGCTCATCCAAAAGTACTACC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAAAAAGGGGACAAGATaGTTACTACCCTCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIKKGTR*LLPSQV
Trigger: AACCTGCGAGGGTAGTAATCATCTTGTCCCCTTTTT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCCAGGCAAGGTTCATaGTTCCTTAGAATTACTACA +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASRQGS*FLRITT
Trigger: TGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp TCATTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCAGACGCTCTTCACAGCACTaGGTCCCAGCTGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: SLVFQRCLSFGKLEHFGRRSSQH*VPAEIS
Trigger: TGAAATTTCAGCTGGGACTCAGTGCTGTGAAGAGCG...TCTGCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS-3UTR GCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCTGTCGAGGATCTGCTaGACCAGCTGTTCCACCGAG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYLSRIC*TSCSTE
Trigger: CTCGGTGGAACAGCTGGTGCAGCAGATCCTCGACAG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACCCTTGCTGTGGCTGTaGTCGTGCTTGCCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAPLLWL*SCLPSD
Trigger: GTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTTTGAGTGGATCAAGTaGTTGGACTTCGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSFEWIK*LDFAQQ
Trigger: CTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCCTGCTCATCTCTCTaGAGGTGCTCCAGACACTCT +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCACSSL*RCSRHS
Trigger: AGAGTGTCTGGAGCACCTGCAGAGAGATGAGCAGGC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGGCACAAAATTCTCCTaGTTGATTCGGTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGGTKFS*LIRSGV
Trigger: CACACCTGACCGAATCAAGCAGGAGAATTTTGTGCC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGCAGCAGCTACTTCTTaGTGTTCCCGCAAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQAAATS*CSRKGR
Trigger: CCGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGAGCCTGCCGTCTTTTaGCACATTTCTTATAACTTC +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKEPAVF*HISYNF
Trigger: GAAGTTATAAGAAATGTGGCAAAAGACGGCAGGCTC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTACACACCTGCCCCTCTaGAAATTTCCACAAGACATT +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSITHLPL*KFPQDI
Trigger: AATGTCTTGTGGAAATTTGCAGAGGGGCAGGTGTGT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCTCATTATTTCCCATaGATTACCCGTTTACCACAC +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASHYFP*ITRLPH
Trigger: GTGTGGTAAACGGGTAATGCATGGGAAATAATGAGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATGCCATAAGCGACCGTaGAGCCAGAGAGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQCHKRP*SQRGVR
Trigger: ACGAACCCCTCTCTGGCTGCACGGTCGCTTATGGCA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTTCTCCCTACGAATTCTaGCAGCTTTCATTCCAATGT +
Preference number: 4 (lower is better)
Translates to: LAGWESSPYEFCQLSFQCSPYEF*QLSFQC
Trigger: ACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGA...ACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461311.1
ENST00000482934.1
ENST00000557126.5
CDS-3UTR CCA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGATCATCTTCTATAGGTaGCACGGTGTTGAGAACACA +
Preference number: 4 (lower is better)
Translates to: VQVATSCGAVTVVKADHKIIFYR*HGVENT
Trigger: TGTGTTCTCAACACCGTGCCACCTATAGAAGATGAT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCAAGCACTCCACTCCCTaGACCTTGAGTTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSKHSTP*TLSFMW
Trigger: CCACATGAAACTCAAGGTCCAGGGAGTGGAGTGCTT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGCAGGAGCACGGGCTTaGCCACCTTGCCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAAGARA*PPCRSS
Trigger: AGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACCGAGCTGCCCGTGGTaGGAAAGGCGAACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAPSCPW*ERRTCG
Trigger: GCCACAAGTTCGCCTTTCCCACCACGGGCAGCTCGG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATTCTCCGAGCTGCCCGTaGTGGGAAAGGCGAACTTGT +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYSPSCP*WERRTC
Trigger: ACAAGTTCGCCTTTCCCACCACGGGCAGCTCGGAGA...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACGTTGGTGGGCAGCATaGACAGGCTCTCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESARWWAA*TGSPSC
Trigger: GCAGCTCGGAGAGCCTGTCCATGCTGCCCACCAACG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAACTTCGGACACGTTGGTaGGCAGCATGGACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQLRTRW*AAWTGS
Trigger: AGAGCCTGTCCATGCTGCCCACCAACGTGTCCGAAG...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGCCTGGAAGTTGGCCTaGAACTGCATGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYAWKLA*NCMRWR
Trigger: CCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTATGGACATCCTGAACTaGTTATCGTCCAACGACAGC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGMDILN*LSSNDS
Trigger: GCTGTCGTTGGACGATAACCAGTTCAGGATGTCCAT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAGTCGGGAATCGAGATaGCCCGACGGTCCCACTTGT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSRESR*PDGPTC
Trigger: ACAAGTGGGACCGTCGGGCCATCTCGATTCCCGACT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCATGACCCCGTGACCTaGCAATTCCCAAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYHDPVT*QFPKAA
Trigger: GGCTGCCTTTGGGAATTGCCAGGTCACGGGGTCATG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAGGTCTTCTCAGCTCTaGGTTGGTGCTTGCAATAAC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGRSSQL*VGACNN
Trigger: GTTATTGCAAGCACCAACCCAGAGCTGAGAAGACCT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACTGCAGTCTCTGGAGTaGGAGGGGAGAGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESALQSLE*EGRVPG
Trigger: GCCGGGAACTCTCCCCTCCCACTCCAGAGACTGCAG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp GGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAATGTGTAAATACGAGTTCCTCTaGAATCAGACAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRMGKLSLRILPAFIPMCKYEFL*NQTAAS
Trigger: AGAAGCTGCTGTCTGATTCCAGAGGAACTCGTATTT...ACACATTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR TCA 90 bp CTCTCATTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCCTATTGCTGTTCCCATaGTCATCTTCTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLVFQRCLSFGKLEHFGLLLFP*SSSIGG
Trigger: GCCACCTATAGAAGATGATCATGGGAACAGCAATAG...GCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGCGCTGTTACACTTGTaGTGCACGCTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAALLHL*CTLPPA
Trigger: AGCTGGCGGCAGCGTGCATCACAAGTGTAACAGCGC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCCGGATGTTGGAGCTaGCCATCTCGGCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEAGCWS*PSRLSG
Trigger: GCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTCCTTCACTGGGGCTaGGTGTCTCGGGGACAGACT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELLHWG*VSRGQT
Trigger: AGTCTGTCCCCGAGACACTCAGCCCCAGTGAAGGAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGGGAGAGTTCCCGGCTaGAGTCCCTCACTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEGRVPG*SPSLLH
Trigger: GTGAAGGAGTGAGGGACTTCAGCCGGGAACTCTCCC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTATGGTTTCCAGCAGCTaGGTTCTTCAACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGMVSSS*VLQQIH
Trigger: ATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCAT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTTAGTGTTCCAGCGGTaGCTCTCTTTTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSILVFQR*LSFGKL
Trigger: AAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATGGAGGAGACCTCGGTaGTGCTCTGGTGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAWRRPR*CSGAGA
Trigger: TGCTCCTGCACCAGAGCAGCACCGAGGTCTCCTCCA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACTGCTGTGGGTGTTCTaGTCGACGGGGAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESALLWVF*STGRGL
Trigger: CAAACCCCTCCCCGTCGAGCAGAACACCCACAGCAG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATCTCCACGTGACCGCTaGAGGAGCTGGTTTGGGACG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESPRDR*RSWFGT
Trigger: CGTCCCAAACCAGCTCCTGCAGCGGTCACGTGGAGA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAACACCCGTCCGCTCTaGTGCAGCATGCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESANTRPL*CSMPRV
Trigger: CACCCTAGGCATGCTGCAGCAGAGCGGACGGGTGTT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTGATGGCTTCGCTGTaGCACTGGGCCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELMASL*HWAIQL
Trigger: GAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGAGCCTGCCGTCTTTTaGCACATTTCTTATAACTTC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIEPAVF*HISYNF
Trigger: GAAGTTATAAGAAATGTGGCAAAAGACGGCAGGCTC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGCCGTCCGGCGAGCCTaGCGTCTTTTGCCACATTTC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAAVRRA*RLLPHF
Trigger: GAAATGTGGCAAAAGACGGCAGGCTCGCCGGACGGC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCGGGGACTGCAACAGCTaGAACATAACCCACACATTT +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSGDCNS*NITHTF
Trigger: AAATGTGTGGGTTATGTTGCAGCTGTTGCAGTCCCC...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCATCAGGTCGGAGAACTaGTTGCTGAAGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSIRSEN*LLKEMS
Trigger: TGACATCTCCTTCAGCAACCAGTTCTCCGACCTGAT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATAGTGGATCAAGTGCTTaGACTTCGCCCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYSGSSA*TSPSRL
Trigger: GAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACT...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAGTGGATCAAGTGCTTaGACTTCGCCCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSGSSA*TSPSRL
Trigger: GAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTCGGAAAGTCTTTGAGTaGATCAAGTGCTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGRKVFE*IKCLDF
Trigger: GAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCG...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAACAGGACAGTGGATTCTaGGGTTCTGTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQQDSGF*GSVPAE
Trigger: CTCAGCTGGGACAGAACCCCAGAATCCACTGTCCTG...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATCGCTTGCAGGACAGTaGATTCTGGGGTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSLAGQ*ILGFCP
Trigger: GGGACAGAACCCCAGAATCCACTGTCCTGCAAGCGA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAAACATGGAATTTACTaGCCAGAACGCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGKHGIY*PERSTT
Trigger: TGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCTGGGAATTTTAAACTaGCATCAGCAAATACGAACT +
Preference number: 4 (lower is better)
Translates to: VRVCVCVCACVLLLHVSALGILN*HQQIRT
Trigger: AGTTCGTATTTGCTGATGCCAGTTTAAAATTCCCAG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAATGCTTCGTTTCAGTaGAAGTGCATTTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSINASFQ*KCIFAS
Trigger: CGAGGCAAAAATGCACTTCCACTGAAACGAAGCATT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp TTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCAGACATCCGCAGAATACACTTTaGGAAACGCTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LVFQRCLSFGKLEHFGRHPQNTL*ETLFTA
Trigger: TGCTGTGAAGAGCGTTTCCCAAAGTGTATTCTGCGG...ATGTCTGCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAAGTAGTCGGTCACCATaGACACCCGTCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESSRSP*TPVRSA
Trigger: AGCAGAGCGGACGGGTGTTCATGGTGACCGACTACT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCCAGGATGGACATCCTaGACTGGTTATCGTCCAACG +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYPGWTS*TGYRPT
Trigger: CGTTGGACGATAACCAGTTCAGGATGTCCATCCTGG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGTATTTCTGGAGAGCTaGTGGCTTCGCTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLVFLES*WLRCAT
Trigger: AGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATAC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACGAAAGCGATTTCACTaGCGGGAGAGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKERKRFH*RESQQG
Trigger: GCCCTGTTGGCTCTCCCGTCAGTGAAATCGCTTTCG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGGTAGTACTTTTGGATaGGCACAGCAGCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEGSTFG*AQQPVG
Trigger: GCCGACGGGCTGCTGTGCTCATCCAAAAGTACTACC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTATTTTTCGAGCAGCTTaGTCCTGCTTTTTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGIFRAA*SCFLVS
Trigger: GCTAACCAAAAAGCAGGATCAAGCTGCTCGAAAAAT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGAATACAGCCCTATATaGGAAGGAAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGEYSPI*EGNGFF
Trigger: GAAGAAGCCATTTCCTTCTCATATAGGGCTGTATTC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp TCATTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCAGAGCACTGAGTCCCAGCTaGAATTTCATATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SLVFQRCLSFGKLEHFGRALSPS*NFIWHL
Trigger: AAGATGCCATATGAAATTTCAGCTGGGACTCAGTGC...TCTGCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS-3UTR GCA 90 bp CTCTCATTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCTTAGTGTTCCAGCGGTaGCTCTCTTTTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: LSLVFQRCLSFGKLEHFGLVFQR*LSFGKL
Trigger: AAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAA...GCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAATCCTCCTCTCCATCTaGTCCAGTCGTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLILLSI*SSRSRM
Trigger: CATCCTGGAACGACTGGAGCAGATGGAGAGGAGGAT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACCATCCAGCTCTCTGTaGTGGGCTCTTCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEPSSSL*WALRLQ
Trigger: CTGCAAGCGAAGAGCCCAGCACAGAGAGCTGGATGG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGGAAGCAGCTTCTCCTaGCTTGTCTGGAAGTACTCA +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCGSSFS*LVWKYS
Trigger: TGAGTACTTCCAGACAAGGCAGGAGAAGCTGCTTCC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGTCTCGGGGACAGACTaGTTAGAACTAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLVSGTD*LELGLC
Trigger: GCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGAC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCAGCAGCTACTTCTTaGTGTTCCCGCAAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEAAATS*CSRKGR
Trigger: CCGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTATTGCTAAGGGATGCTaGTGTATGTCTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGIAKGC*CMSSSS
Trigger: GGAACTTGAAGACATACAGCAGCATCCCTTAGCAAT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGAAATAACCGGCAGGTaGAGGAACAGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGEITGR*RNSILF
Trigger: AAAAAGAATGCTGTTCCTGCACCTGCCGGTTATTTC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTCTCATTATTTCCCATaGATTACCCGTTTACCACAC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISHYFP*ITRLPH
Trigger: GTGTGGTAAACGGGTAATGCATGGGAAATAATGAGA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATCCTCTTCTCACGGCTaGAGCCCTTGCTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASSSHG*SPCCGC
Trigger: ACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAAGGAGTACGCTTCTTTaGCCATCTGCTGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQRSTLL*PSAARR
Trigger: CCTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCT...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAGTCGGGAATCGAGATaGCCCGACGGTCCCACTTGT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASRESR*PDGPTC
Trigger: ACAAGTGGGACCGTCGGGCCATCTCGATTCCCGACT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCATGTCATCCATGGGCTaGCCGCATTCTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSMSSMG*PHSSFS
Trigger: AGAAAATGAAGAATGCGGCCAGCCCATGGATGACAT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR CAA 72 bp ATGTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTaGTCAAAGCTGATCACAAGCAGAAAGACATATACT +
Preference number: 4 (lower is better)
Translates to: MYRWLLVVGLSL*SKLITSRKTYT
Trigger: AGTATATGTCTTTCTGCTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR CAA 72 bp ATAAGCGACCGTGCAGCCAGAGAGGGGTTCGTATTATaGTCTTTATTTCGTTCACACAGTACAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: ISDRAAREGFVL*SLFRSHSTADF
Trigger: GAAATCAGCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCACGGTCGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATCCGCGGAAAGTCTTTaGGTGGATCAAGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSAESL*VDQVLG
Trigger: TCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCTCTGCTAATTTCACATaGCCCCGTGACCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCSANFT*PRDLAI
Trigger: AATTGCCAGGTCACGGGGTCATGTGAAATTAGCAGA...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCATTTTTCGAGCAGCTTaGTCCTGCTTTTTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSIFRAA*SCFLVS
Trigger: GCTAACCAAAAAGCAGGATCAAGCTGCTCGAAAAAT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTCCAGGCAAGGTTCATaGTTCCTTAGAATTACTACA +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGSRQGS*FLRITT
Trigger: TGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAACGCAGCACCACACTaGTCGTTTAGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLNAAPH*SFRWQM
Trigger: CATTTGCCACCTAAACGATCAGTGTGGTGCTGCGTT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTACTGCTCAGTTTGGATaGGATATAGCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGTAQFG*DIAKNM
Trigger: CATGTTTTTGGCTATATCTCATCCAAACTGAGCAGT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAGGCACCAAGAGCACTaGCCCCAGTTTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRHQEH*PQFLPQ
Trigger: TTGTGGTAAAAACTGGGGTCAGTGCTCTTGGTGCCT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATTTGAGTGGATCAAGTaGTTGGACTTCGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLFEWIK*LDFAQQ
Trigger: CTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACCAGTTCCAGGTCAATaGTATCCGCGTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLPVPGQ*YPRALY
Trigger: GTACAAAGCACGCGGATAGCATTGACCTGGAACTGG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTTCAATAATGTGTTCTaGCAAGGTCATCATGTTCAC +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIFNNVF*QGHHVH
Trigger: GTGAACATGATGACCTTGGCAGAACACATTATTGAA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCATTGCTAAGGGATGCTaGTGTATGTCTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSIAKGC*CMSSSS
Trigger: GGAACTTGAAGACATACAGCAGCATCCCTTAGCAAT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCTCGTTTCAGTGGAAGTaGATTTTTGCCTCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCSFQWK*IFASPR
Trigger: CCTAGGCGAGGCAAAAATGCACTTCCACTGAAACGA...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGTCCACTTGATGCCATaGAACATGGGTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYVHLMP*NMGFSC
Trigger: GCAGCTGAAACCCATGTTCCATGGCATCAAGTGGAC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGGAGTACAGGAGAAGTaGTCCACATTCAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQGVQEK*STFKGS
Trigger: TGACCCCTTGAATGTGGACCACTTCTCCTGTACTCC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATATGCACTTCGGATCTaGGCAGCACTGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAYALRI*AALGRQ
Trigger: CTGCCTTCCCAGTGCTGCCCAGATCCGAAGTGCATA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATTCCGGAAAGCTGTCTaGACAAGCCTGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAFRKAV*TSLAAS
Trigger: TGAGGCTGCCAGGCTTGTCCAGACAGCTTTCCGGAA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCTTCGGAATTTGCTCTaGATAAGGATGGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCLRNLL*IRMAAC
Trigger: ACAGGCTGCCATCCTTATCCAGAGCAAATTCCGAAG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTTTTGTACAGCCTATaGTCCACCAGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELLYSL*STRGLW
Trigger: CCACAGCCCCCTGGTGGACCATAGGCTGTACAAAAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAACCCTCGCAGGTTCTTaGAAGGTGGTGGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESATLAGS*KVVGTR
Trigger: TCTTGTCCCCACCACCTTCCAAGAACCTGCGAGGGT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATTTCACATGACCCCGTaGCCTGGCAATTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEFHMTP*PGNSQR
Trigger: CCTTTGGGAATTGCCAGGTCACGGGGTCATGTGAAA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACAAAATTCTCCTGCTTaGTTCGGTCAGGTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLQNSPA*FGQVWL
Trigger: AAGCCACACCTGACCGAATCAAGCAGGAGAATTTTG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCACTGCTCAGTTTGGATaGGATATAGCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSTAQFG*DIAKNM
Trigger: CATGTTTTTGGCTATATCTCATCCAAACTGAGCAGT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATTATTGCTGGCTTCTTaGCACGGGCCTGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELLLAS*HGPVMR
Trigger: CCTCATCACAGGCCCGTGGCAAGAAGCCAGCAATAA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCTCAATGCTATCCGCGTaGTTTGTACGCCATTTGATG +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCSMLSA*FVRHLM
Trigger: CATCAAATGGCGTACAAAGCACGCGGATAGCATTGA...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACGTCTGGCCCTGCTTTaGGTTATTAAGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRLALL*VIKETV
Trigger: GACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAGAAACTGCTCAGTTTaGATGAGATATAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIRNCSV*MRYSQK
Trigger: TTTTTGGCTATATCTCATCCAAACTGAGCAGTTTCT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATCTATTGCTGTTCCCATaGTCATCTTCTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYLLLFP*SSSIGG
Trigger: GCCACCTATAGAAGATGATCATGGGAACAGCAATAG...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACATGATCAGACAGAGTaGGCTGAGCAAACTCATTCT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLHDQTE*AEQTHS
Trigger: AGAATGAGTTTGCTCAGCTCACTCTGTCTGATCATG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGAATACAGCCCTATATaGGAAGGAAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCEYSPI*EGNGFF
Trigger: GAAGAAGCCATTTCCTTCTCATATAGGGCTGTATTC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGGAAGCAGCTTCTCCTaGCTTGTCTGGAAGTACTCA +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAGSSFS*LVWKYS
Trigger: TGAGTACTTCCAGACAAGGCAGGAGAAGCTGCTTCC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR GCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAACACACCTGCCCCTCTaGAAATTTCCACAAGACATT +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQTHLPL*KFPQDI
Trigger: AATGTCTTGTGGAAATTTGCAGAGGGGCAGGTGTGT...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACGTTTACCACACACCTaGCCCTCTGCAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKERLPHT*PSANFH
Trigger: GTGGAAATTTGCAGAGGGGCAGGTGTGTGGTAAACG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAAGGAGATGTCAAAGTaGTCCAGGCTGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAKEMSK*SRLSSM
Trigger: CATGGAGCTCAGCCTGGACCACTTTGACATCTCCTT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACGGAAAGTCTTTGAGTaGATCAAGTGCTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRKVFE*IKCLDF
Trigger: GAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGGAGTACAGGAGAAGTaGTCCACATTCAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAGVQEK*STFKGS
Trigger: TGACCCCTTGAATGTGGACCACTTCTCCTGTACTCC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATCCCTTGGGTATTTCTaGAGAGCTGATGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASLGYF*RADGFA
Trigger: AGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAATGTCATCCATGGGCTaGCCGCATTCTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLMSSMG*PHSSFS
Trigger: AGAAAATGAAGAATGCGGCCAGCCCATGGATGACAT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACCTGTATGTCATCCATaGGCTGGCCGCATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEPVCHP*AGRILH
Trigger: ATGAAGAATGCGGCCAGCCCATGGATGACATACAGG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACATCCGCTAGATAACTaGCCAGCCAGCTCATTGTAC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEHPLDN*PASSLY
Trigger: GTACAATGAGCTGGCTGGCCAGTTATCTAGCGGATG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAAACATGGAATTTACTaGCCAGAACGCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLKHGIY*PERSTT
Trigger: TGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAGAAACTGCTCAGTTTaGATGAGATATAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGRNCSV*MRYSQK
Trigger: TTTTTGGCTATATCTCATCCAAACTGAGCAGTTTCT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAACATCAGATTTCTTTaGCTCCTCATTATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGNIRFL*LLIMWK
Trigger: TTTCCACATAATGAGGAGCCAAAGAAATCTGATGTT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACCTACTCCTGGCACTTaGGAATTCAGATTATCCAAG +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLPTPGT*EFRLSK
Trigger: CTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACAAAATTCTCCTGCTTaGTTCGGTCAGGTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAQNSPA*FGQVWL
Trigger: AAGCCACACCTGACCGAATCAAGCAGGAGAATTTTG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATGTTCTTTCCAATCCTaGGGACTCCATGGGCACAAA +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKECSFQS*GLHGHK
Trigger: TTTGTGCCCATGGAGTCCTCAGGATTGGAAAGAACA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATCAGACAGAGTGAGCTaGGCAAACTCATTCTCTACC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESDRVS*ANSFST
Trigger: GGTAGAGAATGAGTTTGCTCAGCTCACTCTGTCTGA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGATCCAACAGAAGATTaGGTTCCAAGATGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLDPTED*VPRCLA
Trigger: AGCAAGACATCTTGGAACTCAATCTTCTGTTGGATC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGTTCCACACGATGTTTaGATACAGCCCTATATGAGA +
Preference number: 4 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYVPHDV*IQPYMR
Trigger: TCTCATATAGGGCTGTATTCAAACATCGTGTGGAAC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAATTGCTAAGGGATGCTaGTGTATGTCTTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLIAKGC*CMSSSS
Trigger: GGAACTTGAAGACATACAGCAGCATCCCTTAGCAAT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCGTGTGTGTTGTTGTTaGATGTCTCTGCTAAAAACA +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCRVCCC*MSLLKT
Trigger: TGTTTTTAGCAGAGACATGCAACAACAACACACACG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGAAATAACCGGCAGGTaGAGGAACAGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLEITGR*RNSILF
Trigger: AAAAAGAATGCTGTTCCTGCACCTGCCGGTTATTTC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACGGGGTCAAAGTTCATaGTGGTTTCTGGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKERGQSS*WFLESS
Trigger: GGAAGATTCCAGAAACCACCATGAACTTTGACCCCG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGAGTTGGAGATGATCTaGTTGTTGAAGGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQELEMI*LLKATC
Trigger: ACAAGTTGCCTTCAACAACCAGATCATCTCCAACTC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTTCGGAATTTGCTCTaGATAAGGATGGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELRNLL*IRMAAC
Trigger: ACAGGCTGCCATCCTTATCCAGAGCAAATTCCGAAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAAAATAATAGGTATCTaGGGGACTGCAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLKIIGI*GTATAA
Trigger: TGCAGCTGTTGCAGTCCCCCAGATACCTATTATTTT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAATTCTTTCACTCTGTaGCGACAGCGGCGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESANSFTL*RQRRRN
Trigger: GTTTCTTCGCCGCTGTCGCCACAGAGTGAAAGAATT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490905.5
ENST00000495233.5
3UTR CAA 72 bp CCCGTGATCCAACAGAAGATTGAGTTCCAAGATGTCTaGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PVIQQKIEFQDV*LIKLKVVHESA
Trigger: TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAATCTTCTGTTGGATCACGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACATGATCAGACAGAGTaGGCTGAGCAAACTCATTCT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEHDQTE*AEQTHS
Trigger: AGAATGAGTTTGCTCAGCTCACTCTGTCTGATCATG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAAAAAAGGGGACAAGATaGTTACTACCCTCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEKKGTR*LLPSQV
Trigger: AACCTGCGAGGGTAGTAATCATCTTGTCCCCTTTTT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAACACACCTGCCCCTCTaGAAATTTCCACAAGACATT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKETHLPL*KFPQDI
Trigger: AATGTCTTGTGGAAATTTGCAGAGGGGCAGGTGTGT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATTCTCCTGCCTTGTCTaGAAGTACTCAGGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAFSCLV*KYSGFN
Trigger: ATTGAACCCTGAGTACTTCCAGACAAGGCAGGAGAA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATTCTCCTGCCTTGTCTaGAAGTACTCAGGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEFSCLV*KYSGFN
Trigger: ATTGAACCCTGAGTACTTCCAGACAAGGCAGGAGAA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACTTTGTTGGAGTGAGTaGATGGTGTTAAGCTACATA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLLCWSE*MVLSYI
Trigger: TATGTAGCTTAACACCATCCACTCACTCCAACAAAG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCTTCCAGCAGGAGATATaGAAACGTGACATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCFQQEI*KRDIFL
Trigger: TAGAAAAATGTCACGTTTCCATATCTCCTGCTGGAA...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATTACAAATGTACAGGTaGCTACTAGTTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELQMYR*LLVVGL
Trigger: CAGCCCCACAACTAGTAGCCACCTGTACATTTGTAA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAACCCTCTTAATTCTATaGAAGTCTCTACCATCTGTC +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQTLLIL*KSLPSV
Trigger: GACAGATGGTAGAGACTTCCATAGAATTAAGAGGGT...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAATGAAATCCTACTCCTaGCACTTGGGAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLMKSYS*HLGIQI
Trigger: AATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCAT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGATCCAACAGAAGATTaGGTTCCAAGATGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESADPTED*VPRCLA
Trigger: AGCAAGACATCTTGGAACTCAATCTTCTGTTGGATC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGATCCAACAGAAGATTaGGTTCCAAGATGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEDPTED*VPRCLA
Trigger: AGCAAGACATCTTGGAACTCAATCTTCTGTTGGATC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGAATACAGCCCTATATaGGAAGGAAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAEYSPI*EGNGFF
Trigger: GAAGAAGCCATTTCCTTCTCATATAGGGCTGTATTC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGTTCCACACGATGTTTaGATACAGCCCTATATGAGA +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAVPHDV*IQPYMR
Trigger: TCTCATATAGGGCTGTATTCAAACATCGTGTGGAAC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATTCAATAATGTGTTCTaGCAAGGTCATCATGTTCAC +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQFNNVF*QGHHVH
Trigger: GTGAACATGATGACCTTGGCAGAACACATTATTGAA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGAGCCTGCCGTCTTTTaGCACATTTCTTATAACTTC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAEPAVF*HISYNF
Trigger: GAAGTTATAAGAAATGTGGCAAAAGACGGCAGGCTC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGAAATAACCGGCAGGTaGAGGAACAGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAEITGR*RNSILF
Trigger: AAAAAGAATGCTGTTCCTGCACCTGCCGGTTATTTC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAAAAAGCGGTCAGAAATaGTTCGTTTCAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEKSGQK*FVSVEV
Trigger: CACTTCCACTGAAACGAAGCATTTCTGACCGCTTTT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAACTGCTCAGTTTGGATaGGATATAGCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESATAQFG*DIAKNM
Trigger: CATGTTTTTGGCTATATCTCATCCAAACTGAGCAGT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR TCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATTCACACAGTACAGCTaGTTTCGAATGGGTAACAAT +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAFTQYS*FRMGNN
Trigger: ATTGTTACCCATTCGAAATCAGCTGTACTGTGTGAA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR GCA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATCTCATTATTTCCCATaGATTACCCGTTTACCACAC +
Preference number: 4 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASHYFP*ITRLPH
Trigger: GTGTGGTAAACGGGTAATGCATGGGAAATAATGAGA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATCAATTTATGCTTTTTaGGAGCCGGATAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQSIYAF*EPDNLC
Trigger: ACAAAGATTATCCGGCTCCCAAAAAGCATAAATTGA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAGAAACTGCTCAGTTTaGATGAGATATAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLRNCSV*MRYSQK
Trigger: TTTTTGGCTATATCTCATCCAAACTGAGCAGTTTCT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTAAGTGTTCTTTGTTaGAGTGAGTGGATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELSVLC*SEWMVL
Trigger: TAACACCATCCACTCACTCCAACAAAGAACACTTAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGTTTTAACTCACAGTTaGCAGCCAGAACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEVLTHS*QPEPRK
Trigger: TTTTCTTGGTTCTGGCTGCCAACTGTGAGTTAAAAC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
3UTR CAA 72 bp TTTTGGTATAAATATTTGTACAGTTCCACACGATGTTaGAATACAGCCCTATATGAGAAGGAAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FWYKYLYSSTRC*NTALYEKEMAS
Trigger: AGAAGCCATTTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTTATACCAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR GCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAATTATCCAAGAAAGCTaGGCTTACCTATCATCTTAT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEIIQES*AYLSSY
Trigger: ATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAAT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CCA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATCAATTTATGCTTTTTaGGAGCCGGATAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESIYAF*EPDNLC
Trigger: ACAAAGATTATCCGGCTCCCAAAAAGCATAAATTGA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 90 bp GGGCCGAGGCGGCCGAGACCACCTCGGCGACGTGCATGTAGGCCATaGTGCTGGCCCCGCCCTCCGAGCTGCTCAGCTGCAGGCTACCCT +
Preference number: 5 (lower is better)
Translates to: GPRRPRPPRRRACRP*CWPRPPSCSAAGYP
Trigger: AGGGTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCTCGGCCGCCTCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp CCGAGGCGGCCGAGACCACCTCGGCGACGTGCATGTAGGCCATGGTaGTGGCCCCGCCCTCCGAGCTGCTCAGCTGCAGGCTACCCTGCT +
Preference number: 5 (lower is better)
Translates to: PRRPRPPRRRACRPW*WPRPPSCSAAGYPA
Trigger: AGCAGGGTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCTCGGCCGCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GCTGGGCCACGGGGTAGAGTCCCTGCACCACGTTGCCCGGGAGGATaGGGACGCCGCCGGCGCTTCGGATTACCCCGTTGGTCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: AGPRGRVPAPRCPGG*GRRRRFGLPRWSPA
Trigger: AGCCGGAGACCAACGGGGTAATCCGAAGCGCCGGCGGCGTCCCCATCCTCCCGGGCAACGTGGTGCAGGGACTCTACCCCGTGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp AGGCGGCCGAGACCACCTCGGCGACGTGCATGTAGGCCATGGTGCTaGCCCCGCCCTCCGAGCTGCTCAGCTGCAGGCTACCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RRPRPPRRRACRPWC*PRPPSCSAAGYPAG
Trigger: CCCAGCAGGGTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCTCGGCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp ACTGTGCCTGGCTCCCTCCATTCCCGCTCCCGCTGCCGCCTCCACTaGTGCCGCCTCCGCTCGCCTGTTTGTGCTGCTGGGACCCCGTCA +
Preference number: 5 (lower is better)
Translates to: TVPGSLHSRSRCRLH*CRLRSPVCAAGTPS
Trigger: TGACGGGGTCCCAGCAGCACAAACAGGCGAGCGGAGGCGGCAGCAGTGGAGGCGGCAGCGGGAGCGGGAATGGAGGGAGCCAGGCACAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp TCCCAGAAGCACACTGTGCCTGGCTCCCTCCATTCCCGCTCCCGCTaGCGCCTCCACTGCTGCCGCCTCCGCTCGCCTGTTTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SQKHTVPGSLHSRSR*RLHCCRLRSPVCAA
Trigger: AGCAGCACAAACAGGCGAGCGGAGGCGGCAGCAGTGGAGGCGGCAGCGGGAGCGGGAATGGAGGGAGCCAGGCACAGTGTGCTTCTGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GGGTGGTGTCGGGGACTTCCACCTGGTTGGTGGAGGAGACCTCGGTaGTGCTCTGGTGCAGGAGCACGGGCTTGGCCACCTTGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: GWCRGLPPGWWRRPR*CSGAGARAWPPCRS
Trigger: GGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTCCTCCACCAACCAGGTGGAAGTCCCCGACACCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GCAGGAGCACGGGCTTGGCCACCTTGCCGTTCCTCTTCTCACGGCTaGAGCCCTTGCTGTGGCTGTGCTCGTGCTTGCCCTCCGACACGT +
Preference number: 5 (lower is better)
Translates to: AGARAWPPCRSSSHG*SPCCGCARACPPTR
Trigger: ACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp TCCGGGTCGCTGTTGAGCCCGCTGCTGATGGACACAGGGGAGCTCTaGGTGGTGTCGGGGACTTCCACCTGGTTGGTGGAGGAGACCTCG +
Preference number: 5 (lower is better)
Translates to: SGSLLSPLLMDTGEL*VVSGTSTWLVEETS
Trigger: CGAGGTCTCCTCCACCAACCAGGTGGAAGTCCCCGACACCACCCAGAGCTCCCCTGTGTCCATCAGCAGCGGGCTCAACAGCGACCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp TGGTGTCGGGGACTTCCACCTGGTTGGTGGAGGAGACCTCGGTGCTaGTCTGGTGCAGGAGCACGGGCTTGGCCACCTTGCCGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: WCRGLPPGWWRRPRC*SGAGARAWPPCRSS
Trigger: AGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTCCTCCACCAACCAGGTGGAAGTCCCCGACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GTGAGGACGGTGGTAAAGCTGAAGCTCCGCTCCCCGGGTGGCGAGTaGCGGATGTTGGAGCTGACCATCTCGGCTTTCAGGCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: VRTVVKLKLRSPGGE*RMLELTISAFRPPP
Trigger: GGGTGGAGGCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGCTTCAGCTTTACCACCGTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GCTCCCTTCCGCCGCCTGCGAGGTCTCCATGGTGACCTCCCCTTCTaGCGTCATGGCCTGGAAGTTGGCCTGGAACTGCATGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: APFRRLRGLHGDLPF*RHGLEVGLELHEVE
Trigger: CTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGAGACCTCGCAGGCGGCGGAAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GACCGCTGCAGGAGCTGGTTTGGGACGAGGCCTCCGTTTTCACCGTaGGCATCACGAAGGTGCCCCCAGAGTCACTCAGGCTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: DRCRSWFGTRPPFSP*ASRRCPQSHSGCCG
Trigger: CCCACAGCAGCCTGAGTGACTCTGGGGGCACCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGTCCCAAACCAGCTCCTGCAGCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp TGGGTCCGCGGCTGGGGCTTGGTCTGGTGGCTGTCGAGGATCTGCTaGACCAGCTGTTCCACCGAGAAGCCTGAGCTGCTGTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: WVRGWGLVWWLSRIC*TSCSTEKPELLFPL
Trigger: CAATGGGAACAGCAGCTCAGGCTTCTCGGTGGAACAGCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCCGCGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp TTGTGGGTCCGCGGCTGGGGCTTGGTCTGGTGGCTGTCGAGGATCTaGTGCACCAGCTGTTCCACCGAGAAGCCTGAGCTGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: LWVRGWGLVWWLSRI*CTSCSTEKPELLFP
Trigger: TGGGAACAGCAGCTCAGGCTTCTCGGTGGAACAGCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCCGCGGACCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp CGGGCTTGGCCACCTTGCCGTTCCTCTTCTCACGGCTGGAGCCCTTaGTGTGGCTGTGCTCGTGCTTGCCCTCCGACACGTCATTGTGCT +
Preference number: 5 (lower is better)
Translates to: RAWPPCRSSSHGWSP*CGCARACPPTRHCA
Trigger: AGCACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GCTCTTCGGACACGTTGGTGGGCAGCATGGACAGGCTCTCCGAGCTaGCCGTGGTGGGAAAGGCGAACTTGTGGCCATCAGAGCTCACGG +
Preference number: 5 (lower is better)
Translates to: ALRTRWWAAWTGSPS*PWWERRTCGHQSSR
Trigger: CCGTGAGCTCTGATGGCCACAAGTTCGCCTTTCCCACCACGGGCAGCTCGGAGAGCCTGTCCATGCTGCCCACCAACGTGTCCGAAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp CTCCTTGGTGAGGACGGTGGTAAAGCTGAAGCTCCGCTCCCCGGGTaGCGAGTGCCGGATGTTGGAGCTGACCATCTCGGCTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LLGEDGGKAEAPLPG*RVPDVGADHLGFQA
Trigger: GGCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGCTTCAGCTTTACCACCGTCCTCACCAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 90 bp TGCATGAGGTGGAGGGAGGAAGTGGACTCGATCCGCGTCTCCACGTaGCCGCTGCAGGAGCTGGTTTGGGACGAGGCCTCCGTTTTCACC +
Preference number: 5 (lower is better)
Translates to: CMRWREEVDSIRVST*PLQELVWDEASVFT
Trigger: GGTGAAAACGGAGGCCTCGTCCCAAACCAGCTCCTGCAGCGGTCACGTGGAGACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 90 bp CCTCCCCTTCTGCCGTCATGGCCTGGAAGTTGGCCTGGAACTGCATaGGGTGGAGGGAGGAAGTGGACTCGATCCGCGTCTCCACGTGAC +
Preference number: 5 (lower is better)
Translates to: PPLLPSWPGSWPGTA*GGGRKWTRSASPRD
Trigger: GTCACGTGGAGACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp ACCTTGCCGTTCCTCTTCTCACGGCTGGAGCCCTTGCTGTGGCTGTaGTCGTGCTTGCCCTCCGACACGTCATTGTGCTGCACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: TLPFLFSRLEPLLWL*SCLPSDTSLCCTSE
Trigger: CTCGGAGGTGCAGCACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GCCACAGCCGCCGCGGAGGAGGAGTACGCTTCTTTGGCCATCTGCTaGTCGAAGGAGGTGTCCTCGGTCTTGATCTCCTTGGTGAGGACG +
Preference number: 5 (lower is better)
Translates to: ATAAAEEEYASLAIC*SKEVSSVLISLVRT
Trigger: CGTCCTCACCAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCTCCTCCGCGGCGGCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GCTGCCACAGCCGCCGCGGAGGAGGAGTACGCTTCTTTGGCCATCTaGTGCTCGAAGGAGGTGTCCTCGGTCTTGATCTCCTTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: AATAAAEEEYASLAI*CSKEVSSVLISLVR
Trigger: CCTCACCAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCTCCTCCGCGGCGGCTGTGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp TGGTTTGGGACGAGGCCTCCGTTTTCACCGTGGGCATCACGAAGGTaGCCCCAGAGTCACTCAGGCTGCTGTGGGTGTTCTGCTCGACGG +
Preference number: 5 (lower is better)
Translates to: WFGTRPPFSPWASRR*PQSHSGCCGCSARR
Trigger: CCGTCGAGCAGAACACCCACAGCAGCCTGAGTGACTCTGGGGGCACCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGTCCCAAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp GTGACCTCCCCTTCTGCCGTCATGGCCTGGAAGTTGGCCTGGAACTaGATGAGGTGGAGGGAGGAAGTGGACTCGATCCGCGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: VTSPSAVMAWKLAWN*MRWREEVDSIRVST
Trigger: CGTGGAGACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp TTGGCCACCTTGCCGTTCCTCTTCTCACGGCTGGAGCCCTTGCTGTaGCTGTGCTCGTGCTTGCCCTCCGACACGTCATTGTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LATLPFLFSRLEPLL*LCSCLPSDTSLCCT
Trigger: GGTGCAGCACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp AGGAAGTGGACTCGATCCGCGTCTCCACGTGACCGCTGCAGGAGCTaGTTTGGGACGAGGCCTCCGTTTTCACCGTGGGCATCACGAAGG +
Preference number: 5 (lower is better)
Translates to: RKWTRSASPRDRCRS*FGTRPPFSPWASRR
Trigger: CCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGTCCCAAACCAGCTCCTGCAGCGGTCACGTGGAGACGCGGATCGAGTCCACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GCCTGCGAGGTCTCCATGGTGACCTCCCCTTCTGCCGTCATGGCCTaGAAGTTGGCCTGGAACTGCATGAGGTGGAGGGAGGAAGTGGAC +
Preference number: 5 (lower is better)
Translates to: ACEVSMVTSPSAVMA*KLAWNCMRWREEVD
Trigger: GTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGAGACCTCGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GGTCGAGGTGGGATTCGAACCAAGGCAGCCTGGCTCCAGAGCCCATaGTCCTGGCCTTTCACCACGGGGTTCACTACCACTGCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GRGGIRTKAAWLQSP*SWPFTTGFTTTASQ
Trigger: CTGAGAGGCAGTGGTAGTGAACCCCGTGGTGAAAGGCCAGGACCATGGGCTCTGGAGCCAGGCTGCCTTGGTTCGAATCCCACCTCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS TCA 90 bp GCCAGCGGTGGGGGACATGGTGTACACGGCCTCATTGGTGACCTCTaGCATGAACACCGTGGCGCTCTGGGACAAGCTCCCCATCACAGA +
Preference number: 5 (lower is better)
Translates to: ASGGGHGVHGLIGDL*HEHRGALGQAPHHR
Trigger: TCTGTGATGGGGAGCTTGTCCCAGAGCGCCACGGTGTTCATGTCAGAGGTCACCAATGAGGCCGTGTACACCATGTCCCCCACCGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp ATGGCCCGACGGTCCCACTTGTACAGCACGACGGCAGCTTCCAAGTaGCCTAGGGCACACGCCCACATCAGAGGAGTACAGGAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: MARRSHLYSTTAASK*PRAHAHIRGVQEKW
Trigger: CCACTTCTCCTGTACTCCTCTGATGTGGGCGTGTGCCCTAGGGCACTTGGAAGCTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 90 bp TCCATGGTGACCTCCCCTTCTGCCGTCATGGCCTGGAAGTTGGCCTaGAACTGCATGAGGTGGAGGGAGGAAGTGGACTCGATCCGCGTC +
Preference number: 5 (lower is better)
Translates to: SMVTSPSAVMAWKLA*NCMRWREEVDSIRV
Trigger: GACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp TACACGGCCTCATTGGTGACCTCTGACATGAACACCGTGGCGCTCTaGGACAAGCTCCCCATCACAGAGGCCACCGCCATACCGGACACA +
Preference number: 5 (lower is better)
Translates to: YTASLVTSDMNTVAL*DKLPITEATAIPDT
Trigger: TGTGTCCGGTATGGCGGTGGCCTCTGTGATGGGGAGCTTGTCCCAGAGCGCCACGGTGTTCATGTCAGAGGTCACCAATGAGGCCGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GGTTATCGTCCAACGACAGCCAGTCGTGCTGGGAGGAAGGGAGCGTaGGCAGAGCCCGGGCTTTGTACTCAAACACCACCGAGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: GYRPTTASRAGRKGA*AEPGLCTQTPPSWR
Trigger: TCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCGGGCTCTGCCCACGCTCCCTTCCTCCCAGCACGACTGGCTGTCGTTGGACGATAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp AGACCACTTGCAAGAGGTCGAGGTGGGATTCGAACCAAGGCAGCCTaGCTCCAGAGCCCATGGTCCTGGCCTTTCACCACGGGGTTCACT +
Preference number: 5 (lower is better)
Translates to: RPLARGRGGIRTKAA*LQSPWSWPFTTGFT
Trigger: AGTGAACCCCGTGGTGAAAGGCCAGGACCATGGGCTCTGGAGCCAGGCTGCCTTGGTTCGAATCCCACCTCGACCTCTTGCAAGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CCA 90 bp GCAGCGGCCAGGTGGAGTAGGGTCATTCCGCGGAAAGTCTTTGAGTaGATCAAGTGCTTGGACTTCGCCCAGCAGGCTCGGCTCATCATC +
Preference number: 5 (lower is better)
Translates to: AAARWSRVIPRKVFE*IKCLDFAQQARLII
Trigger: GATGATGAGCCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCACCTGGCCGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 90 bp ACTCCCTTGGGTATTTCTGGAGAGCTGATGGCTTCGCTGTGCCACTaGGCCATCCAGCTCTCTGTGCTGGGCTCTTCGCTTGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: TPLGISGELMASLCH*AIQLSVLGSSLAGQ
Trigger: CTGTCCTGCAAGCGAAGAGCCCAGCACAGAGAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 90 bp ACAGTGACTCCCTTGGGTATTTCTGGAGAGCTGATGGCTTCGCTGTaGCACTGGGCCATCCAGCTCTCTGTGCTGGGCTCTTCGCTTGCA +
Preference number: 5 (lower is better)
Translates to: TVTPLGISGELMASL*HWAIQLSVLGSSLA
Trigger: TGCAAGCGAAGAGCCCAGCACAGAGAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGAGTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 90 bp TCGTTGATCAGGTCGGAGAACTGGTTGCTGAAGGAGATGTCAAAGTaGTCCAGGCTGAGCTCCATGTTGGAGGCGTTGCCGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SLIRSENWLLKEMSK*SRLSSMLEALPRLG
Trigger: GCCCAGCCTCGGCAACGCCTCCAACATGGAGCTCAGCCTGGACCACTTTGACATCTCCTTCAGCAACCAGTTCTCCGACCTGATCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp ATGGACATCCTGAACTGGTTATCGTCCAACGACAGCCAGTCGTGCTaGGAGGAAGGGAGCGTGGGCAGAGCCCGGGCTTTGTACTCAAAC +
Preference number: 5 (lower is better)
Translates to: MDILNWLSSNDSQSC*EEGSVGRARALYSN
Trigger: GTTTGAGTACAAAGCCCGGGCTCTGCCCACGCTCCCTTCCTCCCAGCACGACTGGCTGTCGTTGGACGATAACCAGTTCAGGATGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp TGGCAATTCCCAAAGGCAGCCTTCCTAGAGAGTCGGGAATCGAGATaGCCCGACGGTCCCACTTGTACAGCACGACGGCAGCTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: WQFPKAAFLESRESR*PDGPTCTARRQLPS
Trigger: ACTTGGAAGCTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGCCATCTCGATTCCCGACTCTCTAGGAAGGCTGCCTTTGGGAATTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGCCCGACGGTCCCACTaGTACAGCACGACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAARRSH*YSTTAA
Trigger: AGCTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 90 bp ACCACGGGGTTCACTACCACTGCCTCTCAGCACACCGGTTATGCCTaGCAACGGCACAGCCATAGGATGAGGTTCAGTTTCAACAGCACC +
Preference number: 5 (lower is better)
Translates to: TTGFTTTASQHTGYA*QRHSHRMRFSFNST
Trigger: GGTGCTGTTGAAACTGAACCTCATCCTATGGCTGTGCCGTTGGCAGGCATAACCGGTGTGCTGAGAGGCAGTGGTAGTGAACCCCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGAGAGGAGGTGGTGGTaGGGGCCAGCGGTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGERRWW*GPAVGD
Trigger: GTCCCCCACCGCTGGCCCCAACCACCACCTCCTCTC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 90 bp GTTAGCCATCATCAGGACACTCATTGGTTCCCGTGGACGCACCTGTaGAGGTGCTGCCTCCTTTCCTACACTGGTCCCCTTCGGATTTCC +
Preference number: 5 (lower is better)
Translates to: VSHHQDTHWFPWTHL*RCCLLSYTGPLRIS
Trigger: GGAAATCCGAAGGGGACCAGTGTAGGAAAGGAGGCAGCACCTTCACAGGTGCGTCCACGGGAACCAATGAGTGTCCTGATGATGGCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 90 bp CTGACCATCTCGGCTTTCAGGCCTCCACCCCCGTACGTCTGGCCCTaGTTTGGGTTATTAAGGAAACAGTCGGGGTCAAAGTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: LTISAFRPPPPYVWP*FGLLRKQSGSKFMV
Trigger: CACCATGAACTTTGACCCCGACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAAGCCGAGATGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp TTGGAGCTGACCATCTCGGCTTTCAGGCCTCCACCCCCGTACGTCTaGCCCTGCTTTGGGTTATTAAGGAAACAGTCGGGGTCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LELTISAFRPPPPYV*PCFGLLRKQSGSKF
Trigger: GAACTTTGACCCCGACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAAGCCGAGATGGTCAGCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp CTCTGGGTTGGTGCTTGCAATAACAGTGACTCCCTTGGGTATTTCTaGAGAGCTGATGGCTTCGCTGTGCCACTGGGCCATCCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LWVGACNNSDSLGYF*RADGFAVPLGHPAL
Trigger: GAGAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGAGTCACTGTTATTGCAAGCACCAACCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTAGCTCTTCGGACACGTaGGTGGGCAGCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASSSDT*VGSMDR
Trigger: CCTGTCCATGCTGCCCACCAACGTGTCCGAAGAGCT...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGGCGAGTGCCGGATGTaGGAGCTGACCATCTCGGCT +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKGECRM*ELTISA
Trigger: AGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAGTCCCTGCACCACGTaGCCCGGGAGGATGGGGACG +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGSPCTT*PGRMGT
Trigger: CGTCCCCATCCTCCCGGGCAACGTGGTGCAGGGACT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp AGGTGGAGTAGGGTCATTCCGCGGAAAGTCTTTGAGTGGATCAAGTaGTTGGACTTCGCCCAGCAGGCTCGGCTCATCATCTTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: RWSRVIPRKVFEWIK*LDFAQQARLIIFSH
Trigger: ATGCGAGAAGATGATGAGCCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp CTGGGGCTGAGTGTCTCGGGGACAGACTGCTTAGAACTAGGGCTTTaGTTCCTGATATTTGGCTCTTCCAGACTCAGTGCAGTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: LGLSVSGTDCLELGL*FLIFGSSRLSAVGS
Trigger: GCTTCCCACTGCACTGAGTCTGGAAGAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGACACTCAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 90 bp GTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTGCTaGGCCCATGAACAAGTGTGTGGTGAGAGCCTCATTAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: VSALMAPALWIPLLC*AHEQVCGESLISVP
Trigger: TGGAACACTAATGAGGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557126.5
CDS CCA 90 bp TGGGTTATTAAGGAAACAGTCGGGGTCAAAGTTCATGGTGGTTTCTaGAATCTTCCGGCCACCGTCGAGGGTGGTGGAGAGGACCAGCTC +
Preference number: 5 (lower is better)
Translates to: WVIKETVGVKVHGGF*NLPATVEGGGEDQL
Trigger: GAGCTGGTCCTCTCCACCACCCTCGACGGTGGCCGGAAGATTCCAGAAACCACCATGAACTTTGACCCCGACTGTTTCCTTAATAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp CATCTCGGCTTTCAGGCCTCCACCCCCGTACGTCTGGCCCTGCTTTaGGTTATTAAGGAAACAGTCGGGGTCAAAGTTCATGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: HLGFQASTPVRLALL*VIKETVGVKVHGGF
Trigger: GAAACCACCATGAACTTTGACCCCGACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAAGCCGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 90 bp GGAGTAGGGTCATTCCGCGGAAAGTCTTTGAGTGGATCAAGTGCTTaGACTTCGCCCAGCAGGCTCGGCTCATCATCTTCTCGCATACCA +
Preference number: 5 (lower is better)
Translates to: GVGSFRGKSLSGSSA*TSPSRLGSSSSRIP
Trigger: TGGTATGCGAGAAGATGATGAGCCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAGGCTGAGCTCCATGTaGGAGGCGTTGCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIRLSSM*EALPRL
Trigger: CAGCCTCGGCAACGCCTCCAACATGGAGCTCAGCCT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 90 bp TGCTCATCTCTCTGCAGGTGCTCCAGACACTCTGCTAATTTCACATaGCCCCGTGACCTGGCAATTCCCAAAGGCAGCCTTCCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: CSSLCRCSRHSANFT*PRDLAIPKGSLPRE
Trigger: CTCTCTAGGAAGGCTGCCTTTGGGAATTGCCAGGTCACGGGGTCATGTGAAATTAGCAGAGTGTCTGGAGCACCTGCAGAGAGATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 90 bp TTTGGAATTCCACTTTCCTACAGGCTGAGATCCAGAGGCTTGAAATaGTGCAGTCTCTGGAGTGGGAGGGGAGAGTTCCCGGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: FGIPLSYRLRSRGLK*CSLWSGRGEFPAEV
Trigger: GACTTCAGCCGGGAACTCTCCCCTCCCACTCCAGAGACTGCAGCATTTCAAGCCTCTGGATCTCAGCCTGTAGGAAAGTGGAATTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GGGCTGGCAGGATGGGAAAGCTCTCCCTACGAATTCTGCCAGCTTTCATTCCAAAAACGCTCTTCCGGCTaGTTTTCGGCAGCCATTTCC +
Preference number: 5 (lower is better)
Translates to: GLAGWESSPYEFCQLSFQKRSSG*FSAAIS
Trigger: GGAAATGGCTGCCGAAAACAAGCCGGAAGAGCGTTT...TTGGAATGAAAGCTGGCAGAATTCGTAGGGAGAGCTTTCCCATCCTGCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557126.5
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTATGTCCGGGTCGCTGTaGAGCCCGCTGCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGMSGSL*SPLLMD
Trigger: GTCCATCAGCAGCGGGCTCAACAGCGACCCGGACAT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTGCTGGGCTCTTCGCTaGCAGGACAGTGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKCWALR*QDSGFW
Trigger: CCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGCA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGAGCAGCAGCTACTTCTaGCTGTTCCCGCAAGGGTCG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSSSYF*LFPQGS
Trigger: CGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGCT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp AAGTCCCTCACTCCTTCACTGGGGCTGAGTGTCTCGGGGACAGACTaGTTAGAACTAGGGCTTTGCTTCCTGATATTTGGCTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KSLTPSLGLSVSGTD*LELGLCFLIFGSSR
Trigger: TCTGGAAGAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGACACTCAGCCCCAGTGAAGGAGTGAGGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 90 bp AATGTGTCAGCCCTCATGGCTCCAGCTCTGTGGATCCCTCTTCTTTaGTGCGCCCATGAACAAGTGTGTGGTGAGAGCCTCATTAGTGTT +
Preference number: 5 (lower is better)
Translates to: NVSALMAPALWIPLL*CAHEQVCGESLISV
Trigger: AACACTAATGAGGCTCTCACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGCCATGAGGGCTGACACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557126.5
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTCCTTCTTGTCGGTGTaGATGGAGCAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSFLSV*MEQRMG
Trigger: CCCCATCCTCTGCTCCATCAACACCGACAAGAAGGA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCACGGGCTTGGCCACCTaGCCGTTCCTCTTCTCACGG +
Preference number: 5 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSTGLAT*PFLFSR
Trigger: CCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGT...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCGGGACTTCCACCTGGTaGGTGGAGGAGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSGTSTW*VEETSV
Trigger: CACCGAGGTCTCCTCCACCAACCAGGTGGAAGTCCC...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGTGGGAAAGGCGAACTaGTGGCCATCAGAGCTCACG +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIVGKAN*WPSELT
Trigger: CGTGAGCTCTGATGGCCACAAGTTCGCCTTTCCCAC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGTTATTGCTGGCTTCTaGCCACGGGCCTGTGATGAG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKVIAGF*PRACDE
Trigger: CTCATCACAGGCCCGTGGCAAGAAGCCAGCAATAAC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTGAGTGGATCAAGTGCTaGGACTTCGCCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIEWIKC*DFAQQA
Trigger: AGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTC...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTCTGAGATCCAGAGGCTaGAAATGCTGCAGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSALRSRG*KCCSLW
Trigger: CCAGAGACTGCAGCATTTCAAGCCTCTGGATCTCAG...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTCATCAGGACACTCATaGGTTCCCGTGGACGCACCT +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSSGHS*VPVDAP
Trigger: AGGTGCGTCCACGGGAACCAATGAGTGTCCTGATGA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTACTTCGGTAGTACTTTaGGATGAGCACAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSATSVVL*DEHSSP
Trigger: CGGGCTGCTGTGCTCATCCAAAAGTACTACCGAAGT...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTGCTCCTGAGTTTCTGTaGTACAATCACAGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSAAPEFL*YNHSRP
Trigger: CGGACGGCTGTGATTGTACAACAGAAACTCAGGAGC...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS CCA 90 bp AGAGCCCGGGCTTTGTACTCAAACACCACCGAGTTGGAGATGATCTaGTTGTTGAAGGCAACTTGTAGGGTCACAAGACCAGTGTCATGG +
Preference number: 5 (lower is better)
Translates to: RARALYSNTTELEMI*LLKATCRVTRPVSW
Trigger: CCATGACACTGGTCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCGGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GCTCCAGCTCTGTGGATCCCTCTTCTTTGCTGCGCCCATGAACAAGTGTGTGGTAGCGGTGCCTCTCTTTaGGTAAACTTGAACATTTCG +
Preference number: 5 (lower is better)
Translates to: APALWIPLLCCAHEQVCGSGASL*VNLNIS
Trigger: CGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCT...ACCACACACTTGTTCATGGGCGCAGCAAAGAAGAGGGATCCACAGAGCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461311.1
ENST00000482934.1
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGTGTACACGGCCTCATaGGTGACCTCTGACATGAAC +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKVYTAS*VTSDMN
Trigger: GTTCATGTCAGAGGTCACCAATGAGGCCGTGTACAC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTAGGTCGGAGAACTGGTaGCTGAAGGAGATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSARSENW*LKEMSK
Trigger: CTTTGACATCTCCTTCAGCAACCAGTTCTCCGACCT...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAACCTCCGCTCGCCTGTTaGTGCTGCTGGGACCCCGTC +
Preference number: 5 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQPPLAC*CCWDPV
Trigger: GACGGGGTCCCAGCAGCACAAACAGGCGAGCGGAGG...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTCATCAGGACACTCATaGGTTCCCGTGGACGCACCT +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISSGHS*VPVDAP
Trigger: AGGTGCGTCCACGGGAACCAATGAGTGTCCTGATGA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS TCA 90 bp GCTCATTGTACTGCTAATGGTGGCAGGGTCTGTTCTTTCCAATCCTaGGGACTCCATGGGCACAAAATTCTCCTGCTTGATTCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: AHCTANGGRVCSFQS*GLHGHKILLLDSVR
Trigger: CCTGACCGAATCAAGCAGGAGAATTTTGTGCCCATGGAGTCCTCAGGATTGGAAAGAACAGACCCTGCCACCATTAGCAGTACAATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GTGCTAGGAAGAAAAAGGCAGCTTGCTGAGGGGACAGAGTGGCATCATGGATGGAGCGGTGCCTCTCTTTaGGTAAACTTGAACATTTCG +
Preference number: 5 (lower is better)
Translates to: VLGRKRQLAEGTEWHHGWSGASL*VNLNIS
Trigger: CGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCT...CCATCCATGATGCCACTCTGTCCCCTCAGCAAGCTGCCTTTTTCTTCCTAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTTGCTGCAGGTCCACTaGATGCCATGGAACATGGGT +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSILLQVH*MPWNMG
Trigger: ACCCATGTTCCATGGCATCAAGTGGACCTGCAGCAA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATGCAGGAGCACGGGCTaGGCCACCTTGCCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLCRSTG*ATLPFL
Trigger: GAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTTCGGTCTTGATCTCCTaGGTGAGGACGGTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISVLIS*VRTVVK
Trigger: CTTTACCACCGTCCTCACCAAGGAGATCAAGACCGA...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCTGCAGCTCCCCAGACTaGAGCAGGACCTCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCCSSPD*SRTSLP
Trigger: AGGGAGCGAGGTCCTGCTCAAGTCTGGGGAGCTGCA...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGTTCCGCGGAAAGTCTTaGAGTGGATCAAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKFRGKS*SGSSAW
Trigger: CCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAA...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAAGCCCGACGGTCCCACTaGTACAGCACGACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQARRSH*YSTTAA
Trigger: AGCTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGC...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp TGCTCTCATGGAGCTTCCATTCTGATGAGACAGGTGGTAACTGACTGGAAAACAGAAGAAAAAGGCAGCTaGCTGAGGGGACAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: CSHGASILMRQVVTDWKTEEKGS*LRGQSG
Trigger: GCCACTCTGTCCCCTCAGCAAGCTGCCTTTTTCTTC...TGTTTTCCAGTCAGTTACCACCTGTCTCATCAGAATGGAAGCTCCATGAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS TCA 90 bp AAACTCATTCTCTACCTTCTCACTGGTAGATGCACTCAGGAATTCTaGCCAATCCGCGGCGGAGGGAAGGTTAGGTTTCTCGAAAGCGAT +
Preference number: 5 (lower is better)
Translates to: KLILYLLTGRCTQEF*PIRGGGKVRFLESD
Trigger: ATCGCTTTCGAGAAACCTAACCTTCCCTCCGCCGCGGATTGGTCAGAATTCCTGAGTGCATCTACCAGTGAGAAGGTAGAGAATGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303635.12
ENST00000476864.1
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAATGGGGCCGCAAGGCTaGCCGCAGTCCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAMGPQG*PQSSMA
Trigger: GGCCATCGAGGACTGCGGCAAGCCTTGCGGCCCCAT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp TGCAGCCAGAGAGGGGTTCGTATTATTGTCTTTATTTCGTTCACACAGTACAGCTTCGCCCACTCCTTCTaGTCGGTGTTGATGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CSQRGVRIIVFISFTQYSFAHSF*SVLMEQ
Trigger: CTGCTCCATCAACACCGACAAGAAGGAGTGGGCGAA...GCTGTACTGTGTGAACGAAATAAAGACAATAATACGAACCCCTCTCTGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTTGGAGATGATCTGGTaGTTGAAGGCAACTTGTAGG +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSALEMIW*LKATCR
Trigger: CCTACAAGTTGCCTTCAACAACCAGATCATCTCCAA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTACTTCGGTAGTACTTTaGGATGAGCACAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGTSVVL*DEHSSP
Trigger: CGGGCTGCTGTGCTCATCCAAAAGTACTACCGAAGT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTGTGCGTGTGTGTTGTaGTTGCATGTCTCTGCTAAA +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSACACVL*LHVSAK
Trigger: TTTAGCAGAGACATGCAACAACAACACACACGCACA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTTGTTGTTGCATGTCTCTGCTTCCTACTCCTGGCACTaGGGAATTCAGATTATCCAA +
Preference number: 5 (lower is better)
Translates to: VRVCVCVCACVLLLHVSASYSWH*GIQIIQ
Trigger: TTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGA...AGCAGAGACATGCAACAACAACACACACGCACACACGCACACACACACACGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGAGCGGTGCCTCTCTTTaGGTAAACTTGAACATTTCG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKSGASL*VNLNIS
Trigger: CGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCT...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATCACGGCTGGAGCCCTaGCTGTGGCTGTGCTCGTGC +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASRLEP*LWLCSC
Trigger: GCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTATAACAGTGACTCCCTaGGGTATTTCTGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIITVTP*GISGEL
Trigger: CAGCTCTCCAGAAATACCCAAGGGAGTCACTGTTAT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTCAAAGATTCAGCTTCTaGGAAATAACCGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSIQRFSF*EITGRC
Trigger: GCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTG...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp CTCTCATTAGTGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCTCCGCAGAATACACTTaGGGAAACGCTCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: LSLVFQRCLSFGKLEHFGSAEYT*GNALHS
Trigger: GCTGTGAAGAGCGTTTCCCAAAGTGTATTCTGCGGA...GCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACACTAATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS TCA 90 bp CTGTGGCGACAGCGGCGAAGAAACCTCATTATTTTTCGAGCAGCTTaGTCCTGCTTTTTGGTTAGCAAACTGCTCCTGAGTTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LWRQRRRNLIIFRAA*SCFLVSKLLLSFCC
Trigger: ACAACAGAAACTCAGGAGCAGTTTGCTAACCAAAAAGCAGGATCAAGCTGCTCGAAAAATAATGAGGTTTCTTCGCCGCTGTCGCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303635.12
ENST00000476864.1
ENST00000490905.5
ENST00000495233.5
CDS GCA 90 bp TCTGTTCTTTCCAATCCTGAGGACTCCATGGGCACAAAATTCTCCTaGTTGATTCGGTCAGGTGTGGCTTCAATAATGTGTTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: SVLSNPEDSMGTKFS*LIRSGVASIMCSAK
Trigger: CTTGGCAGAACACATTATTGAAGCCACACCTGACCGAATCAAGCAGGAGAATTTTGTGCCCATGGAGTCCTCAGGATTGGAAAGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACCCTCCGACACGTCATaGTGCTGCACCTCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAPSDTS*CCTSEW
Trigger: CCACTCGGAGGTGCAGCACAATGACGTGTCGGAGGG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGAGATGATCTGGTTGTaGAAGGCAACTTGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGEMIWL*KATCRV
Trigger: GACCCTACAAGTTGCCTTCAACAACCAGATCATCTC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTTGCTTTGTACGCCATTaGATGAGGGTCTGGATTAGG +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGCFVRH*MRVWIR
Trigger: CCTAATCCAGACCCTCATCAAATGGCGTACAAAGCA...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTATGCTGGGCTCTTCGCTaGCAGGACAGTGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLCWALR*QDSGFW
Trigger: CCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGCA...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCAGCTTCTCCTGCCTaGTCTGGAAGTACTCAGGGT +
Preference number: 5 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCAASPA*SGSTQG
Trigger: ACCCTGAGTACTTCCAGACAAGGCAGGAGAAGCTGC...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTACAAAATTCTCCTGCTaGATTCGGTCAGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGTKFSC*IRSGVA
Trigger: AGCCACACCTGACCGAATCAAGCAGGAGAATTTTGT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAAGCAGCAGCTACTTCTaGCTGTTCCCGCAAGGGTCG +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLSSSYF*LFPQGS
Trigger: CGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGCT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp GTACAGGTGGCTACTAGTTGTGGGGCTGTCACTGTTGTCAAAGCTGATCACAAGGCTTCACAACAAGCCTaGAGTTTTAACTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: VQVATSCGAVTVVKADHKASQQA*SFNSQL
Trigger: CAACTGTGAGTTAAAACTCAAGGCTTGTTGTGAAGC...CTTGTGATCAGCTTTGACAACAGTGACAGCCCCACAACTAGTAGCCACCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AGGCTGCGGAGCTCCTTCGTAATAACTCCGGATGAGGCAAGAGTAGGTCACTTTCTGACTTGTTTTCCATaGCTCTTTGCACATTTGCTT +
Preference number: 5 (lower is better)
Translates to: RLRSSFVITPDEARVGHFLTCFP*LFAHLL
Trigger: AAGCAAATGTGCAAAGAGCAATGGAAAACAAGTCAG...AAAGTGACCTACTCTTGCCTCATCCGGAGTTATTACGAAGGAGCTCCGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482934.1
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATGGCTGTGCTCGTGCTaGCCCTCCGACACGTCATTG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEWLCSC*PSDTSL
Trigger: CAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGAGGAGTACGCTTCTTaGGCCATCTGCTGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLEEYAS*AICCSK
Trigger: CTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCTC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGGCAGAGCCCGGGCTTaGTACTCAAACACCACCGAG +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAGRARA*YSNTTE
Trigger: CTCGGTGGTGTTTGAGTACAAAGCCCGGGCTCTGCC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGCAGCTTCTCCTGCCTaGTCTGGAAGTACTCAGGGT +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLAASPA*SGSTQG
Trigger: ACCCTGAGTACTTCCAGACAAGGCAGGAGAAGCTGC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTGCGTGTGTGTTGTTGTaGCATGTCTCTGCTAAAAAC +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGACVLL*HVSAKN
Trigger: GTTTTTAGCAGAGACATGCAACAACAACACACACGC...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAACTGCAGAGGGATTTaGTATGTGTGTGTACGTGTG +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGNCRGI*YVCVRV
Trigger: CACACGTACACACACATACAAAATCCCTCTGCAGTT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp CAGTCCCAAAGATTCAGCTTCTTGGAAATAACCGGCAGGTGCAGGAACAGCATTAGTTCCACACGATGTTaGAATACAGCCCTATATGAG +
Preference number: 5 (lower is better)
Translates to: QSQRFSFLEITGRCRNSISSTRC*NTALYE
Trigger: CTCATATAGGGCTGTATTCAAACATCGTGTGGAACT...AATGCTGTTCCTGCACCTGCCGGTTATTTCCAAGAAGCTGAATCTTTGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGAGGTGTCCTCGGTCTaGATCTCCTTGGTGAGGACG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEEVSSV*ISLVRT
Trigger: CGTCCTCACCAAGGAGATCAAGACCGAGGACACCTC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGAGTGGATCAAGTGCTaGGACTTCGCCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAEWIKC*DFAQQA
Trigger: AGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACGCAAGGGTCGGCCCTaGTATTTCCGGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESARKGRP*YFRKAV
Trigger: GACAGCTTTCCGGAAATACAAGGGCCGACCCTTGCG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACGCAAGGGTCGGCCCTaGTATTTCCGGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKERKGRP*YFRKAV
Trigger: GACAGCTTTCCGGAAATACAAGGGCCGACCCTTGCG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAAGCAGCAGCTACTTCTaGCTGTTCCCGCAAGGGTCG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESSSYF*LFPQGS
Trigger: CGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGCT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAACTTCGGTAGTACTTTaGGATGAGCACAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLTSVVL*DEHSSP
Trigger: CGGGCTGCTGTGCTCATCCAAAAGTACTACCGAAGT...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTAGCTCCTGAGTTTCTGTaGTACAATCACAGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLAPEFL*YNHSRP
Trigger: CGGACGGCTGTGATTGTACAACAGAAACTCAGGAGC...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp CCAAAAACATGGAATTTACTGGCCAGAACGCAGCACCACACTGATCGTTTAGGTAAAAGCAATGTCACATaGCTAAGGGATGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: PKTWNLLARTQHHTDRLGKSNVT*LRDAAV
Trigger: TACAGCAGCATCCCTTAGCAATGTGACATTGCTTTT...ACCTAAACGATCAGTGTGGTGCTGCGTTCTGGCCAGTAAATTCCATGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAGAGCTGCTGTTCCCATaGCTGCAGGTCCACTTGATG +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESAELLFP*LQVHLM
Trigger: CATCAAGTGGACCTGCAGCAATGGGAACAGCAGCTC...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACTTCTCAGCTCTGGGTaGGTGCTTGCAATAACAGTG +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLLLSSG*VLAITV
Trigger: CACTGTTATTGCAAGCACCAACCCAGAGCTGAGAAG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp TGTTCCAGCGGTGCCTCTCTTTTGGTAAACTTGAACATTTCGGCAGACATTCAAATTTCATATGGCATCTaGATTAATGTCCGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: CSSGASLLVNLNISADIQISYGI*INVRLP
Trigger: GGGGAGACGGACATTAATCAAGATGCCATATGAAAT...TTGAATGTCTGCCGAAATGTTCAAGTTTACCAAAAGAGAGGCACCGCTGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAAAACGCTCTTCCGGCTaGTTTTCGGCAGCCATTTCC +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEKRSSG*FSAAIS
Trigger: GGAAATGGCTGCCGAAAACAAGCCGGAAGAGCGTTT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAACGGAGATGAAGTCGTaGATCAGGTCGGAGAACTGG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKETEMKS*IRSENW
Trigger: CCAGTTCTCCGACCTGATCAACGACTTCATCTCCGT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp ATAATGAAATCCTACTCCTGGCACTTGGGAATTCAGATTATCCAAGAAAGCTGCCTTAGAACTAGGGCTTaGCTTCCTGATATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: IMKSYSWHLGIQIIQESCLRTRA*LPDIWL
Trigger: GAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAG...GCAGCTTTCTTGGATAATCTGAATTCCCAAGTGCCAGGAGTAGGATTTCATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAACTGAGATCCAGAGGCTaGAAATGCTGCAGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKELRSRG*KCCSLW
Trigger: CCAGAGACTGCAGCATTTCAAGCCTCTGGATCTCAG...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCTCCTGAGTTTCTGTaGTACAATCACAGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEAPEFL*YNHSRP
Trigger: CGGACGGCTGTGATTGTACAACAGAAACTCAGGAGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATTCCGCGGAAAGTCTTaGAGTGGATCAAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEFRGKS*SGSSAW
Trigger: CCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCACTTCTCAGCTCTGGGTaGGTGCTTGCAATAACAGTG +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESALLSSG*VLAITV
Trigger: CACTGTTATTGCAAGCACCAACCCAGAGCTGAGAAG...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp AAATGTCCAGGCAAGGTTCATGATTCCTTAGAATTACTACAGCTTCCAAGGTTACTTAGAACTAGGGCTTaGCTTCCTGATATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: KCPGKVHDSLELLQLPRLLRTRA*LPDIWL
Trigger: GAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAG...TAACCTTGGAAGCTGTAGTAATTCTAAGGAATCATGAACCTTGCCTGGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATATTCTTTCACTCCTTTaGTACAGCCTATGGTCCACC +
Preference number: 5 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYILSLL*YSLWST
Trigger: GGTGGACCATAGGCTGTACAAAAGGAGTGAAAGAAT...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATAACTGCAGAGGGATTTaGTATGTGTGTGTACGTGTG +
Preference number: 5 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYNCRGI*YVCVRV
Trigger: CACACGTACACACACATACAAAATCCCTCTGCAGTT...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 90 bp CTCCTTTCTTTGGTCTTCACTTTTCCACGCATCTTAAAGCTGCCATaGAGGATCATTTCTCTTCTGCCAAAGACCAATCTTTCTATTATT +
Preference number: 5 (lower is better)
Translates to: LLSLVFTFPRILKLP*RIISLLPKTNLSII
Trigger: AATAATAGAAAGATTGGTCTTTGGCAGAAGAGAAATGATCCTGCATGGCAGCTTTAAGATGCGTGGAAAAGTGAAGACCAAAGAAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461580.5
ENST00000470648.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCATCAAACACCACCGAGTaGGAGATGATCTGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASNTTE*EMIWLL
Trigger: CAACAACCAGATCATCTCCAACTCGGTGGTGTTTGA...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAATGCTTTGTACGCCATTaGATGAGGGTCTGGATTAGG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKECFVRH*MRVWIR
Trigger: CCTAATCCAGACCCTCATCAAATGGCGTACAAAGCA...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAACAAAATTCTCCTGCTaGATTCGGTCAGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESATKFSC*IRSGVA
Trigger: AGCCACACCTGACCGAATCAAGCAGGAGAATTTTGT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 90 bp TGTCATACAGTTTCATTTATCCTCCCAACAACCCTAAAAAGCAAGTaGGAGACACACAGTATCTACATTTCACAGAGGATAAAACAGAAG +
Preference number: 5 (lower is better)
Translates to: CHTVSFILPTTLKSK*ETHSIYISQRIKQK
Trigger: CTTCTGTTTTATCCTCTGTGAAATGTAGATACTGTGTGTCTCCCACTTGCTTTTTAGGGTTGTTGGGAGGATAAATGAAACTGTATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCGTGTGTGTTGTTGTaGCATGTCTCTGCTAAAAAC +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEACVLL*HVSAKN
Trigger: GTTTTTAGCAGAGACATGCAACAACAACACACACGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAACTGCAGAGGGATTTaGTATGTGTGTGTACGTGTG +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESANCRGI*YVCVRV
Trigger: CACACGTACACACACATACAAAATCCCTCTGCAGTT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp AACATTTTGCATGGTTTCCAGCAGCTGAGTTCTTCAACAGATCCATTGATTCAATACAGTAATTCGAGGTaGGCAGTGAAAGGAAGTAAT +
Preference number: 5 (lower is better)
Translates to: NILHGFQQLSSSTDPLIQYSNSR*AVKGSN
Trigger: ATTACTTCCTTTCACTGCCAACCTCGAATTACTGTA...TTGAATCAATGGATCTGTTGAAGAACTCAGCTGCTGGAAACCATGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp GCACTTGGGAATTCAGATTATCCAAGAAAGCTGCGCTTACCTATCATCTTATATGAGGGGTTCGTATTATaGTCTTTATTTCGTTCACAC +
Preference number: 5 (lower is better)
Translates to: ALGNSDYPRKLRLPIILYEGFVL*SLFRSH
Trigger: GTGTGAACGAAATAAAGACAATAATACGAACCCCTC...ATATAAGATGATAGGTAAGCGCAGCTTTCTTGGATAATCTGAATTCCCAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAAGTTCCACACGATGTTaGAATACAGCCCTATATGAG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKESSTRC*NTALYE
Trigger: CTCATATAGGGCTGTATTCAAACATCGTGTGGAACT...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS-3UTR CAA 90 bp ATTGAGTTCCAAGATGTCTTGCTGATCAAATTAAAAGTTGTCCATGAAAGTGCAAGTTTTAACTCACAGTaGGCAGCCAGAACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: IEFQDVLLIKLKVVHESASFNSQ*AARTKK
Trigger: TTTCTTGGTTCTGGCTGCCAACTGTGAGTTAAAACT...TGCACTTTCATGGACAACTTTTAATTTGATCAGCAAGACATCTTGGAACTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS-3UTR CAA 90 bp AAATATTTGTACAGTTCCACACGATGTTTGAATACAGCCCTATATGAGAAGGAAGCAATTCAAAACATTTaGCATGGTTTCCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KYLYSSTRCLNTALYEKEAIQNI*HGFQQL
Trigger: CAGCTGCTGGAAACCATGCAAAATGTTTTGAATTGC...TTCCTTCTCATATAGGGCTGTATTCAAACATCGTGTGGAACTGTACAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp TGGGCTGGGCCACGGGGTAGAGTCCCTGCACCACGTTaGCCGGGAGGATGGGGACGCCGCCGGCGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: WAGPRGRVPAPR*PGGWGRRRRFG
Trigger: TCCGAAGCGCCGGCGGCGTCCCCATCCTCCCGGGCAACGTGGTGCAGGGACTCTACCCCGTGGCCCAGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp ACCCGTCCGCTCTGCTGCAGCATGCCTAGGGTGCCCTaGGCCGAGGCGGCCGAGACCACCTCGGCGACGTGC +
Preference number: 6 (lower is better)
Translates to: TRPLCCSMPRVP*AEAAETTSATC
Trigger: GCACGTCGCCGAGGTGGTCTCGGCCGCCTCGGCCCAGGGCACCCTAGGCATGCTGCAGCAGAGCGGACGGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GGCTCCCTCCATTCCCGCTCCCGCTGCCGCCTCCACTaGTGCCGCCTCCGCTCGCCTGTTTGTGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: GSLHSRSRCRLH*CRLRSPVCAAG
Trigger: CCCAGCAGCACAAACAGGCGAGCGGAGGCGGCAGCAGTGGAGGCGGCAGCGGGAGCGGGAATGGAGGGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GGGCCCGCGCCCCGTCCTCTGACTGTGAGAGCGCCGTaGTGTCCCCCGACACCAGCTGGTGCCCATAGATGG +
Preference number: 6 (lower is better)
Translates to: GPAPRPLTVRAP*CPPTPAGAHRW
Trigger: CCATCTATGGGCACCAGCTGGTGTCGGGGGACAGCACGGCGCTCTCACAGTCAGAGGACGGGGCGCGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CCGAGACCACCTCGGCGACGTGCATGTAGGCCATGGTaGTGGCCCCGCCCTCCGAGCTGCTCAGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: PRPPRRRACRPW*WPRPPSCSAAG
Trigger: GCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CGGGGTAGAGTCCCTGCACCACGTTGCCCGGGAGGATaGGGACGCCGCCGGCGCTTCGGATTACCCCGTTGG +
Preference number: 6 (lower is better)
Translates to: RGRVPAPRCPGG*GRRRRFGLPRW
Trigger: CCAACGGGGTAATCCGAAGCGCCGGCGGCGTCCCCATCCTCCCGGGCAACGTGGTGCAGGGACTCTACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CGGCCGAGACCACCTCGGCGACGTGCATGTAGGCCATaGTGCTGGCCCCGCCCTCCGAGCTGCTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: RPRPPRRRACRP*CWPRPPSCSAA
Trigger: TGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCTCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GCATGTAGGCCATGGTGCTGGCCCCGCCCTCCGAGCTaGTCAGCTGCAGGCTACCCTGCTGGGGGCTACAGC +
Preference number: 6 (lower is better)
Translates to: ACRPWCWPRPPS*SAAGYPAGGYS
Trigger: GCTGTAGCCCCCAGCAGGGTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CCGCCTCCACTGCTGCCGCCTCCGCTCGCCTGTTTGTaGTGCTGGGACCCCGTCATCTCGGCCATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PPPLLPPPLACL*CWDPVISAILL
Trigger: GAGGAGGATGGCCGAGATGACGGGGTCCCAGCAGCACAAACAGGCGAGCGGAGGCGGCAGCAGTGGAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp TCCGCTCCCCGGGTGGCGAGTGCCGGATGTTGGAGCTaGCCATCTCGGCTTTCAGGCCTCCACCCCCGTACG +
Preference number: 6 (lower is better)
Translates to: SAPRVASAGCWS*PSRLSGLHPRT
Trigger: CGTACGGGGGTGGAGGCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CCTCCACTGCTGCCGCCTCCGCTCGCCTGTTTGTGCTaGTGGGACCCCGTCATCTCGGCCATCCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: PPLLPPPLACLC*WDPVISAILLS
Trigger: GGAGAGGAGGATGGCCGAGATGACGGGGTCCCAGCAGCACAAACAGGCGAGCGGAGGCGGCAGCAGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGGCTGCCGGTGCAGAGGCAGTTGTGGGTCCGCGGCTaGGGCTTGGTCTGGTGGCTGTCGAGGATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RLPVQRQLWVRG*GLVWWLSRICC
Trigger: GCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCCGCGGACCCACAACTGCCTCTGCACCGGCAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGACCACCTCGGCGACGTGCATGTAGGCCATGGTGCTaGCCCCGCCCTCCGAGCTGCTCAGCTGCAGGCTAC +
Preference number: 6 (lower is better)
Translates to: RPPRRRACRPWC*PRPPSCSAAGY
Trigger: GTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCCAGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp CCGGTGCAGAGGCAGTTGTGGGTCCGCGGCTGGGGCTaGGTCTGGTGGCTGTCGAGGATCTGCTGCACCAGC +
Preference number: 6 (lower is better)
Translates to: PVQRQLWVRGWG*VWWLSRICCTS
Trigger: GCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCCGCGGACCCACAACTGCCTCTGCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CGGGGACTTCCACCTGGTTGGTGGAGGAGACCTCGGTaGTGCTCTGGTGCAGGAGCACGGGCTTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: RGLPPGWWRRPR*CSGAGARAWPP
Trigger: AGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTCCTCCACCAACCAGGTGGAAGTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CCAGACTTGAGCAGGACCTCGCTCCCTTCCGCCGCCTaGGAGGTCTCCATGGTGACCTCCCCTTCTGCCGTC +
Preference number: 6 (lower is better)
Translates to: PDLSRTSLPSAA*EVSMVTSPSAV
Trigger: GACGGCAGAAGGGGAGGTCACCATGGAGACCTCGCAGGCGGCGGAAGGGAGCGAGGTCCTGCTCAAGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CGGTGCAGAGGCAGTTGTGGGTCCGCGGCTGGGGCTTaGTCTGGTGGCTGTCGAGGATCTGCTGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: RCRGSCGSAAGA*SGGCRGSAAPA
Trigger: AGCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCCGCGGACCCACAACTGCCTCTGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CCACTGCTGCCGCCTCCGCTCGCCTGTTTGTGCTGCTaGGACCCCGTCATCTCGGCCATCCTCCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: PLLPPPLACLCC*DPVISAILLSI
Trigger: GATGGAGAGGAGGATGGCCGAGATGACGGGGTCCCAGCAGCACAAACAGGCGAGCGGAGGCGGCAGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp GTGACCACCGGGCTGTCCACCATGTCCGGGTCGCTGTaGAGCCCGCTGCTGATGGACACAGGGGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VTTGLSTMSGSL*SPLLMDTGELW
Trigger: CCAGAGCTCCCCTGTGTCCATCAGCAGCGGGCTCAACAGCGACCCGGACATGGTGGACAGCCCGGTGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp CTGAAGCTCCGCTCCCCGGGTGGCGAGTGCCGGATGTaGGAGCTGACCATCTCGGCTTTCAGGCCTCCACCC +
Preference number: 6 (lower is better)
Translates to: LKLRSPGGECRM*ELTISAFRPPP
Trigger: GGGTGGAGGCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp GAGACCTCGGTGCTGCTCTGGTGCAGGAGCACGGGCTTGGCCACCTaGCCGTTCCTCTTCTCACGGCTGGAGCCCTTGCTGTGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: ETSVLLWCRSTGLAT*PFLFSRLEPLLWLC
Trigger: GCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp GACACACCTGTGACCACCGGGCTGTCCACCATGTCCGGGTCGCTGTaGAGCCCGCTGCTGATGGACACAGGGGAGCTCTGGGTGGTGTCG +
Preference number: 6 (lower is better)
Translates to: DTPVTTGLSTMSGSL*SPLLMDTGELWVVS
Trigger: CGACACCACCCAGAGCTCCCCTGTGTCCATCAGCAGCGGGCTCAACAGCGACCCGGACATGGTGGACAGCCCGGTGGTCACAGGTGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CCATCACAGAGGCCACCGCCATACCGGACACACCTGTaGCCACCGGGCTGTCCACCATGTCCGGGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PSQRPPPYRTHL*PPGCPPCPGRC
Trigger: ACAGCGACCCGGACATGGTGGACAGCCCGGTGGTCACAGGTGTGTCCGGTATGGCGGTGGCCTCTGTGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CGCGGCTGGGGCTTGGTCTGGTGGCTGTCGAGGATCTaGTGCACCAGCTGTTCCACCGAGAAGCCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: RGWGLVWWLSRI*CTSCSTEKPEL
Trigger: CAGCTCAGGCTTCTCGGTGGAACAGCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CGGGCTTGGCCACCTTGCCGTTCCTCTTCTCACGGCTaGAGCCCTTGCTGTGGCTGTGCTCGTGCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: RAWPPCRSSSHG*SPCCGCARACP
Trigger: AGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGACCTCGGTGCTGCTCTGGTGCAGGAGCACGGGCTTaGCCACCTTGCCGTTCCTCTTCTCACGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RPRCCSGAGARA*PPCRSSSHGWS
Trigger: GCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp GAGGACGGTGGTAAAGCTGAAGCTCCGCTCCCCGGGTaGCGAGTGCCGGATGTTGGAGCTGACCATCTCGGC +
Preference number: 6 (lower is better)
Translates to: EDGGKAEAPLPG*RVPDVGADHLG
Trigger: GCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGCTTCAGCTTTACCACCGTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp GCCACCTTGCCGTTCCTCTTCTCACGGCTGGAGCCCTaGCTGTGGCTGTGCTCGTGCTTGCCCTCCGACACG +
Preference number: 6 (lower is better)
Translates to: ATLPFLFSRLEP*LWLCSCLPSDT
Trigger: CGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp GTGCTGCTCTGGTGCAGGAGCACGGGCTTGGCCACCTaGCCGTTCCTCTTCTCACGGCTGGAGCCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VLLWCRSTGLAT*PFLFSRLEPLL
Trigger: CAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp GAGACCTCGGTGCTGCTCTGGTGCAGGAGCACGGGCTaGGCCACCTTGCCGTTCCTCTTCTCACGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: ETSVLLWCRSTG*ATLPFLFSRLE
Trigger: CTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp GTGGTAAAGCTGAAGCTCCGCTCCCCGGGTGGCGAGTGCCGGATGTaGGAGCTGACCATCTCGGCTTTCAGGCCTCCACCCCCGTACGTC +
Preference number: 6 (lower is better)
Translates to: VVKLKLRSPGGECRM*ELTISAFRPPPPYV
Trigger: GACGTACGGGGGTGGAGGCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGCTTCAGCTTTACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GGCTGGGGCTTGGTCTGGTGGCTGTCGAGGATCTGCTaGACCAGCTGTTCCACCGAGAAGCCTGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GWGLVWWLSRIC*TSCSTEKPELL
Trigger: CAGCAGCTCAGGCTTCTCGGTGGAACAGCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CCACCTTGCCGTTCCTCTTCTCACGGCTGGAGCCCTTaGTGTGGCTGTGCTCGTGCTTGCCCTCCGACACGT +
Preference number: 6 (lower is better)
Translates to: PPCRSSSHGWSP*CGCARACPPTR
Trigger: ACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp TGCTGCTCTGGTGCAGGAGCACGGGCTTGGCCACCTTaGCGTTCCTCTTCTCACGGCTGGAGCCCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: CCSGAGARAWPP*RSSSHGWSPCC
Trigger: ACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CGCCGCCTGCGAGGTCTCCATGGTGACCTCCCCTTCTaGCGTCATGGCCTGGAAGTTGGCCTGGAACTGCAT +
Preference number: 6 (lower is better)
Translates to: RRLRGLHGDLPF*RHGLEVGLELH
Trigger: ATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGAGACCTCGCAGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGCTCTGGGTGGTGTCGGGGACTTCCACCTGGTTGGTaGAGGAGACCTCGGTGCTGCTCTGGTGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SSGWCRGLPPGW*RRPRCCSGAGA
Trigger: TGCTCCTGCACCAGAGCAGCACCGAGGTCTCCTCCACCAACCAGGTGGAAGTCCCCGACACCACCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp ACTCGATCCGCGTCTCCACGTGACCGCTGCAGGAGCTaGTTTGGGACGAGGCCTCCGTTTTCACCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: TRSASPRDRCRS*FGTRPPFSPWA
Trigger: TGCCCACGGTGAAAACGGAGGCCTCGTCCCAAACCAGCTCCTGCAGCGGTCACGTGGAGACGCGGATCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp GGGCCAGCGGTGGGGGACATGGTGTACACGGCCTCATaGGTGACCTCTGACATGAACACCGTGGCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GPAVGDMVYTAS*VTSDMNTVALW
Trigger: CCAGAGCGCCACGGTGTTCATGTCAGAGGTCACCAATGAGGCCGTGTACACCATGTCCCCCACCGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp AAGGAGATGTCAAAGTGGTCCAGGCTGAGCTCCATGTaGGAGGCGTTGCCGAGGCTGGGCTGGGCCACGGGG +
Preference number: 6 (lower is better)
Translates to: KEMSKWSRLSSM*EALPRLGWATG
Trigger: CCCCGTGGCCCAGCCCAGCCTCGGCAACGCCTCCAACATGGAGCTCAGCCTGGACCACTTTGACATCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp ACGGGCTTGGCCACCTTGCCGTTCCTCTTCTCACGGCTGGAGCCCTaGCTGTGGCTGTGCTCGTGCTTGCCCTCCGACACGTCATTGTGC +
Preference number: 6 (lower is better)
Translates to: TGLATLPFLFSRLEP*LWLCSCLPSDTSLC
Trigger: GCACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAAGGTGGCCAAGCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp AGTGGACTCGATCCGCGTCTCCACGTGACCGCTGCAGGAGCTGGTTaGGGACGAGGCCTCCGTTTTCACCGTGGGCATCACGAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: SGLDPRLHVTAAGAG*GRGLRFHRGHHEGA
Trigger: GGCACCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGTCCCAAACCAGCTCCTGCAGCGGTCACGTGGAGACGCGGATCGAGTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp TGGTGGTTGGGGCCAGCGGTGGGGGACATGGTGTACACGGCCTCATaGGTGACCTCTGACATGAACACCGTGGCGCTCTGGGACAAGCTC +
Preference number: 6 (lower is better)
Translates to: WWLGPAVGDMVYTAS*VTSDMNTVALWDKL
Trigger: GAGCTTGTCCCAGAGCGCCACGGTGTTCATGTCAGAGGTCACCAATGAGGCCGTGTACACCATGTCCCCCACCGCTGGCCCCAACCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp ACACGTTGGTGGGCAGCATGGACAGGCTCTCCGAGCTaGCCGTGGTGGGAAAGGCGAACTTGTGGCCATCAG +
Preference number: 6 (lower is better)
Translates to: TRWWAAWTGSPS*PWWERRTCGHQ
Trigger: CTGATGGCCACAAGTTCGCCTTTCCCACCACGGGCAGCTCGGAGAGCCTGTCCATGCTGCCCACCAACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GTGGTAAAGCTGAAGCTCCGCTCCCCGGGTGGCGAGTaGCGGATGTTGGAGCTGACCATCTCGGCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: VVKLKLRSPGGE*RMLELTISAFR
Trigger: CCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGCACTCGCCACCCGGGGAGCGGAGCTTCAGCTTTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GCCGCCGCGGAGGAGGAGTACGCTTCTTTGGCCATCTaGTGCTCGAAGGAGGTGTCCTCGGTCTTGATCTCC +
Preference number: 6 (lower is better)
Translates to: AAAEEEYASLAI*CSKEVSSVLIS
Trigger: GGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCTCCTCCGCGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp ATCCTGAACTGGTTATCGTCCAACGACAGCCAGTCGTaGTGGGAGGAAGGGAGCGTGGGCAGAGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: ILNWLSSNDSQS*WEEGSVGRARA
Trigger: AGCCCGGGCTCTGCCCACGCTCCCTTCCTCCCAGCACGACTGGCTGTCGTTGGACGATAACCAGTTCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGGAGCTGGTTTGGGACGAGGCCTCCGTTTTCACCGTaGGCATCACGAAGGTGCCCCCAGAGTCACTCAGGC +
Preference number: 6 (lower is better)
Translates to: RSWFGTRPPFSP*ASRRCPQSHSG
Trigger: GCCTGAGTGACTCTGGGGGCACCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGTCCCAAACCAGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CTGAACTGGTTATCGTCCAACGACAGCCAGTCGTGCTaGGAGGAAGGGAGCGTGGGCAGAGCCCGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LNWLSSNDSQSC*EEGSVGRARAL
Trigger: CAAAGCCCGGGCTCTGCCCACGCTCCCTTCCTCCCAGCACGACTGGCTGTCGTTGGACGATAACCAGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CGAACCAAGGCAGCCTGGCTCCAGAGCCCATGGTCCTaGCCTTTCACCACGGGGTTCACTACCACTGCCTCT +
Preference number: 6 (lower is better)
Translates to: RTKAAWLQSPWS*PFTTGFTTTAS
Trigger: AGAGGCAGTGGTAGTGAACCCCGTGGTGAAAGGCCAGGACCATGGGCTCTGGAGCCAGGCTGCCTTGGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CCA 72 bp GCAAGAGGTCGAGGTGGGATTCGAACCAAGGCAGCCTaGCTCCAGAGCCCATGGTCCTGGCCTTTCACCACG +
Preference number: 6 (lower is better)
Translates to: ARGRGGIRTKAA*LQSPWSWPFTT
Trigger: CGTGGTGAAAGGCCAGGACCATGGGCTCTGGAGCCAGGCTGCCTTGGTTCGAATCCCACCTCGACCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CAA 90 bp TTGGCCATCTGCTGCTCGAAGGAGGTGTCCTCGGTCTTGATCTCCTaGGTGAGGACGGTGGTAAAGCTGAAGCTCCGCTCCCCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: LAICCSKEVSSVLIS*VRTVVKLKLRSPGG
Trigger: GCCACCCGGGGAGCGGAGCTTCAGCTTTACCACCGTCCTCACCAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp CCTGGGCAGCGGCCAGGTGGAGTAGGGTCATTCCGCGGAAAGTCTTaGAGTGGATCAAGTGCTTGGACTTCGCCCAGCAGGCTCGGCTCA +
Preference number: 6 (lower is better)
Translates to: PGQRPGGVGSFRGKS*SGSSAWTSPSRLGS
Trigger: TGAGCCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS TCA 72 bp GGGGGACATGGTGTACACGGCCTCATTGGTGACCTCTaGCATGAACACCGTGGCGCTCTGGGACAAGCTCCC +
Preference number: 6 (lower is better)
Translates to: GGHGVHGLIGDL*HEHRGALGQAP
Trigger: GGGAGCTTGTCCCAGAGCGCCACGGTGTTCATGTCAGAGGTCACCAATGAGGCCGTGTACACCATGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CTGCCGTCATGGCCTGGAAGTTGGCCTGGAACTGCATaGGGTGGAGGGAGGAAGTGGACTCGATCCGCGTCT +
Preference number: 6 (lower is better)
Translates to: LPSWPGSWPGTA*GGGRKWTRSAS
Trigger: AGACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp TTCCTCTTCTCACGGCTGGAGCCCTTGCTGTGGCTGTaGTCGTGCTTGCCCTCCGACACGTCATTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: FLFSRLEPLLWL*SCLPSDTSLCC
Trigger: GCAGCACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp ACGAGGCCTCCGTTTTCACCGTGGGCATCACGAAGGTaGCCCCAGAGTCACTCAGGCTGCTGTGGGTGTTCT +
Preference number: 6 (lower is better)
Translates to: TRPPFSPWASRR*PQSHSGCCGCS
Trigger: AGAACACCCACAGCAGCCTGAGTGACTCTGGGGGCACCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CGGTCCCACTTGTACAGCACGACGGCAGCTTCCAAGTaGCCTAGGGCACACGCCCACATCAGAGGAGTACAG +
Preference number: 6 (lower is better)
Translates to: RSHLYSTTAASK*PRAHAHIRGVQ
Trigger: CTGTACTCCTCTGATGTGGGCGTGTGCCCTAGGGCACTTGGAAGCTGCCGTCGTGCTGTACAAGTGGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 72 bp CTGGGCCATCCAGCTCTCTGTGCTGGGCTCTTCGCTTaGAGGACAGTGGATTCTGGGGTTCTGTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LGHPALCAGLFA*RTVDSGVLSQL
Trigger: CAGCTGGGACAGAACCCCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGCACAGAGAGCTGGATGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp TTGCCGTTCCTCTTCTCACGGCTGGAGCCCTTGCTGTaGCTGTGCTCGTGCTTGCCCTCCGACACGTCATTG +
Preference number: 6 (lower is better)
Translates to: LPFLFSRLEPLL*LCSCLPSDTSL
Trigger: CAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAACGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp TGGTTTCTGGAATCTTCCGGCCACCGTCGAGGGTGGTaGAGAGGACCAGCTCTTCGGACACGTTGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: WFLESSGHRRGW*RGPALRTRWWA
Trigger: TGCCCACCAACGTGTCCGAAGAGCTGGTCCTCTCCACCACCCTCGACGGTGGCCGGAAGATTCCAGAAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp TGGTGGTTTCTGGAATCTTCCGGCCACCGTCGAGGGTaGTGGAGAGGACCAGCTCTTCGGACACGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: WWFLESSGHRRG*WRGPALRTRWW
Trigger: CCACCAACGTGTCCGAAGAGCTGGTCCTCTCCACCACCCTCGACGGTGGCCGGAAGATTCCAGAAACCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp GTCATGGCCTGGAAGTTGGCCTGGAACTGCATGAGGTaGAGGGAGGAAGTGGACTCGATCCGCGTCTCCACG +
Preference number: 6 (lower is better)
Translates to: VMAWKLAWNCMR*REEVDSIRVST
Trigger: CGTGGAGACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp GTCTCCATGGTGACCTCCCCTTCTGCCGTCATGGCCTaGAAGTTGGCCTGGAACTGCATGAGGTGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: VSMVTSPSAVMA*KLAWNCMRWRE
Trigger: CTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp CCAAAGGCAGCCTTCCTAGAGAGTCGGGAATCGAGATaGCCCGACGGTCCCACTTGTACAGCACGACGGCAG +
Preference number: 6 (lower is better)
Translates to: PKAAFLESRESR*PDGPTCTARRQ
Trigger: CTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGCCATCTCGATTCCCGACTCTCTAGGAAGGCTGCCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp GGGATTCGAACCAAGGCAGCCTGGCTCCAGAGCCCATaGTCCTGGCCTTTCACCACGGGGTTCACTACCACT +
Preference number: 6 (lower is better)
Translates to: GIRTKAAWLQSP*SWPFTTGFTTT
Trigger: AGTGGTAGTGAACCCCGTGGTGAAAGGCCAGGACCATGGGCTCTGGAGCCAGGCTGCCTTGGTTCGAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CAA 72 bp AGAGAGTCGGGAATCGAGATGGCCCGACGGTCCCACTaGTACAGCACGACGGCAGCTTCCAAGTGCCCTAGG +
Preference number: 6 (lower is better)
Translates to: RESGIEMARRSH*YSTTAASKCPR
Trigger: CCTAGGGCACTTGGAAGCTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGCCATCTCGATTCCCGACTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 72 bp CAGAGACTGGGTCTGTCCTTCCTTGTGCCTTCCGGCTaGTTTTCGGCAGCCATTTCCCCTCCGCGCGCCACA +
Preference number: 6 (lower is better)
Translates to: QRLGLSFLVPSG*FSAAISPPRAT
Trigger: TGTGGCGCGCGGAGGGGAAATGGCTGCCGAAAACAAGCCGGAAGGCACAAGGAAGGACAGACCCAGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467404.6
CDS CAA 90 bp GAGGTCTCCATGGTGACCTCCCCTTCTGCCGTCATGGCCTGGAAGTaGGCCTGGAACTGCATGAGGTGGAGGGAGGAAGTGGACTCGATC +
Preference number: 6 (lower is better)
Translates to: EVSMVTSPSAVMAWK*AWNCMRWREEVDSI
Trigger: GATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTTCCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGAGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CTTTCGTCCATTTCGCCCACTCCTTCTTGTCGGTGTTaGTGGAGCAGAGGATGGGGCCGCAAGGCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: LSSISPTPSCRC*WSRGWGRKACR
Trigger: GCGGCAAGCCTTGCGGCCCCATCCTCTGCTCCATCAACACCGACAAGAAGGAGTGGGCGAAATGGACGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp GCCGCGGAGGAGGAGTACGCTTCTTTGGCCATCTGCTaGTCGAAGGAGGTGTCCTCGGTCTTGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: AAEEEYASLAIC*SKEVSSVLISL
Trigger: CAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCTCCTCCGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp CCCTTGGGTATTTCTGGAGAGCTGATGGCTTCGCTGTaGCACTGGGCCATCCAGCTCTCTGTGCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: PLGISGELMASL*HWAIQLSVLGS
Trigger: AGAGCCCAGCACAGAGAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp GAGGACCTTCACTCCTCCCTCTGGGTAAGACCACTCTaGGGAGTAGTCGGTCACCATGAACACCCGTCCGCT +
Preference number: 6 (lower is better)
Translates to: EDLHSSLWVRPL*GVVGHHEHPSA
Trigger: AGCGGACGGGTGTTCATGGTGACCGACTACTCCCCAGAGTGGTCTTACCCAGAGGGAGGAGTGAAGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp GAGAGCCAACAGGGCTCAAGCGGATCTGGGCAGCACTaGGAAGGCAGTCAGCATCCGCTAGATAACTGGCCA +
Preference number: 6 (lower is better)
Translates to: ESQQGSSGSGQH*EGSQHPLDNWP
Trigger: TGGCCAGTTATCTAGCGGATGCTGACTGCCTTCCCAGTGCTGCCCAGATCCGCTTGAGCCCTGTTGGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490905.5
CDS CAA 72 bp ACTGGGCCATCCAGCTCTCTGTGCTGGGCTCTTCGCTaGCAGGACAGTGGATTCTGGGGTTCTGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: TGPSSSLCWALR*QDSGFWGSVPA
Trigger: AGCTGGGACAGAACCCCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGCACAGAGAGCTGGATGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 90 bp AGCTGCCCGATGAGCTCTTCTTTCGTCCATTTCGCCCACTCCTTCTaGTCGGTGTTGATGGAGCAGAGGATGGGGCCGCAAGGCTTGCCG +
Preference number: 6 (lower is better)
Translates to: SCPMSSSFVHFAHSF*SVLMEQRMGPQGLP
Trigger: CGGCAAGCCTTGCGGCCCCATCCTCTGCTCCATCAACACCGACAAGAAGGAGTGGGCGAAATGGACGAAAGAAGAGCTCATCGGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp ATGAGCTCTTCTTTCGTCCATTTCGCCCACTCCTTCTTGTCGGTGTaGATGGAGCAGAGGATGGGGCCGCAAGGCTTGCCGCAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: MSSSFVHFAHSFLSV*MEQRMGPQGLPQSS
Trigger: CGAGGACTGCGGCAAGCCTTGCGGCCCCATCCTCTGCTCCATCAACACCGACAAGAAGGAGTGGGCGAAATGGACGAAAGAAGAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp TCATTGGTGACCTCTGACATGAACACCGTGGCGCTCTaGGACAAGCTCCCCATCACAGAGGCCACCGCCATA +
Preference number: 6 (lower is better)
Translates to: SLVTSDMNTVAL*DKLPITEATAI
Trigger: TATGGCGGTGGCCTCTGTGATGGGGAGCTTGTCCCAGAGCGCCACGGTGTTCATGTCAGAGGTCACCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp ACCATCTCGGCTTTCAGGCCTCCACCCCCGTACGTCTaGCCCTGCTTTGGGTTATTAAGGAAACAGTCGGGG +
Preference number: 6 (lower is better)
Translates to: TISAFRPPPPYV*PCFGLLRKQSG
Trigger: CCCCGACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAAGCCGAGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp GGTATTTCTGGAGAGCTGATGGCTTCGCTGTGCCACTaGGCCATCCAGCTCTCTGTGCTGGGCTCTTCGCTT +
Preference number: 6 (lower is better)
Translates to: GISGELMASLCH*AIQLSVLGSSL
Trigger: AAGCGAAGAGCCCAGCACAGAGAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp ATTTGCTGTGGTCAGACCACTTGCAAGAGGTCGAGGTaGGATTCGAACCAAGGCAGCCTGGCTCCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: ICCGQTTCKRSR*DSNQGSLAPEP
Trigger: GGGCTCTGGAGCCAGGCTGCCTTGGTTCGAATCCCACCTCGACCTCTTGCAAGTGGTCTGACCACAGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CAA 72 bp TGCTGCTCGAAGGAGGTGTCCTCGGTCTTGATCTCCTaGGTGAGGACGGTGGTAAAGCTGAAGCTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: CCSKEVSSVLIS*VRTVVKLKLRS
Trigger: GGAGCGGAGCTTCAGCTTTACCACCGTCCTCACCAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp CGGCCAGGTGGAGTAGGGTCATTCCGCGGAAAGTCTTaGAGTGGATCAAGTGCTTGGACTTCGCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RPGGVGSFRGKS*SGSSAWTSPSR
Trigger: CCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCACCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 90 bp TACGCTTCTTTGGCCATCTGCTGCTCGAAGGAGGTGTCCTCGGTCTaGATCTCCTTGGTGAGGACGGTGGTAAAGCTGAAGCTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: YASLAICCSKEVSSV*ISLVRTVVKLKLRS
Trigger: GGAGCGGAGCTTCAGCTTTACCACCGTCCTCACCAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAAAGAAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CATCAGGACACTCATTGGTTCCCGTGGACGCACCTGTaGAGGTGCTGCCTCCTTTCCTACACTGGTCCCCTT +
Preference number: 6 (lower is better)
Translates to: HQDTHWFPWTHL*RCCLLSYTGPL
Trigger: AAGGGGACCAGTGTAGGAAAGGAGGCAGCACCTTCACAGGTGCGTCCACGGGAACCAATGAGTGTCCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 72 bp TCGGCTTTCAGGCCTCCACCCCCGTACGTCTGGCCCTaGTTTGGGTTATTAAGGAAACAGTCGGGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: SAFRPPPPYVWP*FGLLRKQSGSK
Trigger: CTTTGACCCCGACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGGTCGGAGAACTGGTTGCTGAAGGAGATGTCAAAGTaGTCCAGGCTGAGCTCCATGTTGGAGGCGTTGCCG +
Preference number: 6 (lower is better)
Translates to: RSENWLLKEMSK*SRLSSMLEALP
Trigger: CGGCAACGCCTCCAACATGGAGCTCAGCCTGGACCACTTTGACATCTCCTTCAGCAACCAGTTCTCCGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGGTGGAGTAGGGTCATTCCGCGGAAAGTCTTTGAGTaGATCAAGTGCTTGGACTTCGCCCAGCAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: RWSRVIPRKVFE*IKCLDFAQQAR
Trigger: CCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 90 bp GGTCTTCTCAGCTCTGGGTTGGTGCTTGCAATAACAGTGACTCCCTaGGGTATTTCTGGAGAGCTGATGGCTTCGCTGTGCCACTGGGCC +
Preference number: 6 (lower is better)
Translates to: GLLSSGLVLAITVTP*GISGELMASLCHWA
Trigger: GGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGAGTCACTGTTATTGCAAGCACCAACCCAGAGCTGAGAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS TCA 72 bp GCGCAGCACCCCAGGCTGAATCAGGGATGCAGGCACTaGGATCTGGTCAAACAGGCAGCTGTAGTTATTGCT +
Preference number: 6 (lower is better)
Translates to: AQHPRLNQGCRH*DLVKQAAVVIA
Trigger: AGCAATAACTACAGCTGCCTGTTTGACCAGATCTCAGTGCCTGCATCCCTGATTCAGCCTGGGGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS GCA 72 bp AGGGTCATTCCGCGGAAAGTCTTTGAGTGGATCAAGTaGTTGGACTTCGCCCAGCAGGCTCGGCTCATCATC +
Preference number: 6 (lower is better)
Translates to: RVIPRKVFEWIK*LDFAQQARLII
Trigger: GATGATGAGCCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp AAGGAAACAGTCGGGGTCAAAGTTCATGGTGGTTTCTaGAATCTTCCGGCCACCGTCGAGGGTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: KETVGVKVHGGF*NLPATVEGGGE
Trigger: CTCTCCACCACCCTCGACGGTGGCCGGAAGATTCCAGAAACCACCATGAACTTTGACCCCGACTGTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp AGGGCACACGCCCACATCAGAGGAGTACAGGAGAAGTaGTCCACATTCAAGGGGTCAACTTCCAGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RAHAHIRGVQEK*STFKGSTSSSR
Trigger: CCTGGAACTGGAAGTTGACCCCTTGAATGTGGACCACTTCTCCTGTACTCCTCTGATGTGGGCGTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp GAGGCTCGTTATATGCACTTCGGATCTGGGCAGCACTaGGAAGGCAGTCAGCATCCGCTAGATAACTGGCCA +
Preference number: 6 (lower is better)
Translates to: EARYMHFGSGQH*EGSQHPLDNWP
Trigger: TGGCCAGTTATCTAGCGGATGCTGACTGCCTTCCCAGTGCTGCCCAGATCCGAAGTGCATATAACGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000476864.1
ENST00000495233.5
CDS CAA 72 bp TTGGCCATCTGCTGCTCGAAGGAGGTGTCCTCGGTCTaGATCTCCTTGGTGAGGACGGTGGTAAAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LAICCSKEVSSV*ISLVRTVVKLK
Trigger: CTTCAGCTTTACCACCGTCCTCACCAAGGAGATCAAGACCGAGGACACCTCCTTCGAGCAGCAGATGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp GGGAGCGTGGGCAGAGCCCGGGCTTTGTACTCAAACACCACCGAGTaGGAGATGATCTGGTTGTTGAAGGCAACTTGTAGGGTCACAAGA +
Preference number: 6 (lower is better)
Translates to: GSVGRARALYSNTTE*EMIWLLKATCRVTR
Trigger: TCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCGGGCTCTGCCCACGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp TGGAGTAGGGTCATTCCGCGGAAAGTCTTTGAGTGGATCAAGTGCTaGGACTTCGCCCAGCAGGCTCGGCTCATCATCTTCTCGCATACC +
Preference number: 6 (lower is better)
Translates to: WSRVIPRKVFEWIKC*DFAQQARLIIFSHT
Trigger: GGTATGCGAGAAGATGATGAGCCGAGCCTGCTGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CTCTGCAGGTGCTCCAGACACTCTGCTAATTTCACATaGCCCCGTGACCTGGCAATTCCCAAAGGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LCRCSRHSANFT*PRDLAIPKGSL
Trigger: AAGGCTGCCTTTGGGAATTGCCAGGTCACGGGGTCATGTGAAATTAGCAGAGTGTCTGGAGCACCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 72 bp TTCACTACCACTGCCTCTCAGCACACCGGTTATGCCTaGCAACGGCACAGCCATAGGATGAGGTTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: FTTTASQHTGYA*QRHSHRMRFSF
Trigger: GAAACTGAACCTCATCCTATGGCTGTGCCGTTGGCAGGCATAACCGGTGTGCTGAGAGGCAGTGGTAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CCA 72 bp GGAAACTCAGGCACAGAGAGGTTGGGTGATTTGCTGTaGTCAGACCACTTGCAAGAGGTCGAGGTGGGATTC +
Preference number: 6 (lower is better)
Translates to: GNSGTERLGDLL*SDHLQEVEVGF
Trigger: GAATCCCACCTCGACCTCTTGCAAGTGGTCTGACCACAGCAAATCACCCAACCTCTCTGTGCCTGAGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CAA 72 bp ATGAGCTCTTCTTTCGTCCATTTCGCCCACTCCTTCTaGTCGGTGTTGATGGAGCAGAGGATGGGGCCGCAA +
Preference number: 6 (lower is better)
Translates to: MSSSFVHFAHSF*SVLMEQRMGPQ
Trigger: TTGCGGCCCCATCCTCTGCTCCATCAACACCGACAAGAAGGAGTGGGCGAAATGGACGAAAGAAGAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp ACTGGGGCTGAGTGTCTCGGGGACAGACTGCTTAGAACTAGGGCTTaGCTTCCTGATATTTGGCTCTTCCAGACTCAGTGCAGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: TGAECLGDRLLRTRA*LPDIWLFQTQCSGK
Trigger: CTTCCCACTGCACTGAGTCTGGAAGAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGACACTCAGCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 72 bp ACTCCTTCACTGGGGCTGAGTGTCTCGGGGACAGACTaGTTAGAACTAGGGCTTTGCTTCCTGATATTTGGC +
Preference number: 6 (lower is better)
Translates to: TPSLGLSVSGTD*LELGLCFLIFG
Trigger: GCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGACACTCAGCCCCAGTGAAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp TTTCAGGCCTCCACCCCCGTACGTCTGGCCCTGCTTTaGGTTATTAAGGAAACAGTCGGGGTCAAAGTTCAT +
Preference number: 6 (lower is better)
Translates to: FQASTPVRLALL*VIKETVGVKVH
Trigger: ATGAACTTTGACCCCGACTGTTTCCTTAATAACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CCA 72 bp TCCACGGAGATGAAGTCGTTGATCAGGTCGGAGAACTaGTTGCTGAAGGAGATGTCAAAGTGGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: STEMKSLIRSEN*LLKEMSKWSRL
Trigger: CAGCCTGGACCACTTTGACATCTCCTTCAGCAACCAGTTCTCCGACCTGATCAACGACTTCATCTCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp ACGGAGATGAAGTCGTTGATCAGGTCGGAGAACTGGTaGCTGAAGGAGATGTCAAAGTGGTCCAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: TEMKSLIRSENW*LKEMSKWSRLS
Trigger: GCTCAGCCTGGACCACTTTGACATCTCCTTCAGCAACCAGTTCTCCGACCTGATCAACGACTTCATCTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp GGCAGAGCCCGGGCTTTGTACTCAAACACCACCGAGTaGGAGATGATCTGGTTGTTGAAGGCAACTTGTAGG +
Preference number: 6 (lower is better)
Translates to: GRARALYSNTTE*EMIWLLKATCR
Trigger: CCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCGGGCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp AGCTCTGGGTTGGTGCTTGCAATAACAGTGACTCCCTaGGGTATTTCTGGAGAGCTGATGGCTTCGCTGTGC +
Preference number: 6 (lower is better)
Translates to: SSGLVLAITVTP*GISGELMASLC
Trigger: GCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGAGTCACTGTTATTGCAAGCACCAACCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 90 bp CGGGCTTTGTACTCAAACACCACCGAGTTGGAGATGATCTGGTTGTaGAAGGCAACTTGTAGGGTCACAAGACCAGTGTCATGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RALYSNTTELEMIWL*KATCRVTRPVSWAG
Trigger: CCCAGCCCATGACACTGGTCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp GCCCGGGCTTTGTACTCAAACACCACCGAGTTGGAGATGATCTGGTaGTTGAAGGCAACTTGTAGGGTCACAAGACCAGTGTCATGGGCT +
Preference number: 6 (lower is better)
Translates to: ARALYSNTTELEMIW*LKATCRVTRPVSWA
Trigger: AGCCCATGACACTGGTCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 90 bp AAGATCTTTGGAATTCCACTTTCCTACAGGCTGAGATCCAGAGGCTaGAAATGCTGCAGTCTCTGGAGTGGGAGGGGAGAGTTCCCGGCT +
Preference number: 6 (lower is better)
Translates to: KIFGIPLSYRLRSRG*KCCSLWSGRGEFPA
Trigger: AGCCGGGAACTCTCCCCTCCCACTCCAGAGACTGCAGCATTTCAAGCCTCTGGATCTCAGCCTGTAGGAAAGTGGAATTCCAAAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 72 bp GAGAACACAGTAGGTGCTAGTTCCGCAGAATACACTTaGGGAAACGCTCTTCCGGCTTGTTTTCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: ENTVGASSAEYT*GNALPACFRQP
Trigger: TGGCTGCCGAAAACAAGCCGGAAGAGCGTTTCCCAAAGTGTATTCTGCGGAACTAGCACCTACTGTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303635.12
ENST00000461311.1
ENST00000473578.5
ENST00000557126.5
CDS CAA 72 bp GAGTGTCTCGGGGACAGACTGCTTAGAACTAGGGCTTaGCTTCCTGATATTTGGCTCTTCCAGACTCAGTGC +
Preference number: 6 (lower is better)
Translates to: ECLGDRLLRTRA*LPDIWLFQTQC
Trigger: GCACTGAGTCTGGAAGAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 72 bp AGTGTCTCGGGGACAGACTGCTTAGAACTAGGGCTTTaGTTCCTGATATTTGGCTCTTCCAGACTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: SVSGTDCLELGL*FLIFGSSRLSA
Trigger: TGCACTGAGTCTGGAAGAGCCAAATATCAGGAAGCAAAGCCCTAGTTCTAAGCAGTCTGTCCCCGAGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS GCA 72 bp GTACAATCACAGCCGTCCGGCGAGCCTGCCGTCTTTTaGCACATTTCTTATAACTTCGGTAGTACTTTTGGA +
Preference number: 6 (lower is better)
Translates to: VQSQPSGEPAVF*HISYNFGSTFG
Trigger: TCCAAAAGTACTACCGAAGTTATAAGAAATGTGGCAAAAGACGGCAGGCTCGCCGGACGGCTGTGATTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303635.12
ENST00000476864.1
ENST00000490905.5
ENST00000495233.5
CDS CAA 90 bp GTTCTTTCCAATCCTGAGGACTCCATGGGCACAAAATTCTCCTGCTaGATTCGGTCAGGTGTGGCTTCAATAATGTGTTCTGCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: VLSNPEDSMGTKFSC*IRSGVASIMCSAKV
Trigger: GACCTTGGCAGAACACATTATTGAAGCCACACCTGACCGAATCAAGCAGGAGAATTTTGTGCCCATGGAGTCCTCAGGATTGGAAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CAA 90 bp CACGGTGTTGAGAACACAGTAGGTGCTAGTTCCGCAGAATACACTTaGGGAAACGCTCTTCACAGCACTGAGTCCCAGCTGAAATTTCAT +
Preference number: 6 (lower is better)
Translates to: HGVENTVGASSAEYT*GNALHSTESQLKFH
Trigger: ATGAAATTTCAGCTGGGACTCAGTGCTGTGAAGAGCGTTTCCCAAAGTGTATTCTGCGGAACTAGCACCTACTGTGTTCTCAACACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS GCA 72 bp TCCAATCCTGAGGACTCCATGGGCACAAAATTCTCCTaGTTGATTCGGTCAGGTGTGGCTTCAATAATGTGT +
Preference number: 6 (lower is better)
Translates to: SNPEDSMGTKFS*LIRSGVASIMC
Trigger: ACACATTATTGAAGCCACACCTGACCGAATCAAGCAGGAGAATTTTGTGCCCATGGAGTCCTCAGGATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS CCA 72 bp GCTTTGTACTCAAACACCACCGAGTTGGAGATGATCTaGTTGTTGAAGGCAACTTGTAGGGTCACAAGACCA +
Preference number: 6 (lower is better)
Translates to: ALYSNTTELEMI*LLKATCRVTRP
Trigger: TGGTCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp TACTCAAACACCACCGAGTTGGAGATGATCTGGTTGTaGAAGGCAACTTGTAGGGTCACAAGACCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: YSNTTELEMIWL*KATCRVTRPVS
Trigger: TGACACTGGTCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS CAA 72 bp TTGTACTCAAACACCACCGAGTTGGAGATGATCTGGTaGTTGAAGGCAACTTGTAGGGTCACAAGACCAGTG +
Preference number: 6 (lower is better)
Translates to: LYSNTTELEMIW*LKATCRVTRPV
Trigger: CACTGGTCTTGTGACCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CCTCATAGAGTTCTCTCTGTTCATGATCAGACAGAGTaGGCTGAGCAAACTCATTCTCTACCTTCTCACTGG +
Preference number: 6 (lower is better)
Translates to: PHRVLSVHDQTE*AEQTHSLPSHW
Trigger: CCAGTGAGAAGGTAGAGAATGAGTTTGCTCAGCTCACTCTGTCTGATCATGAACAGAGAGAACTCTATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303635.12
ENST00000476864.1
ENST00000490905.5
ENST00000495233.5
CDS TCA 72 bp CAGCGGCGAAGAAACCTCATTATTTTTCGAGCAGCTTaGTCCTGCTTTTTGGTTAGCAAACTGCTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: QRRRNLIIFRAA*SCFLVSKLLLS
Trigger: ACTCAGGAGCAGTTTGCTAACCAAAAAGCAGGATCAAGCTGCTCGAAAAATAATGAGGTTTCTTCGCCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303635.12
ENST00000476864.1
ENST00000490905.5
ENST00000495233.5
CDS CAA 72 bp AATCCTGAGGACTCCATGGGCACAAAATTCTCCTGCTaGATTCGGTCAGGTGTGGCTTCAATAATGTGTTCT +
Preference number: 6 (lower is better)
Translates to: NPEDSMGTKFSC*IRSGVASIMCS
Trigger: AGAACACATTATTGAAGCCACACCTGACCGAATCAAGCAGGAGAATTTTGTGCCCATGGAGTCCTCAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303635.12
ENST00000495233.5
CDS TCA 72 bp CCTGTATTTCACTTTCTTCCTGTTGTAGAGTATCATTaGGCCATTCTGTGGTCTTGTCTTAGGGGAGGTGGT +
Preference number: 6 (lower is better)
Translates to: PVFHFLPVVEYH*AILWSCLRGGG
Trigger: ACCACCTCCCCTAAGACAAGACCACAGAATGGCTCAATGATACTCTACAACAGGAAGAAAGTGAAATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303635.12
CDS TCA 72 bp CGCAGAATACACTTTGGGAAACGCTCTTCACAGCACTaGGTCCCAGCTGAAATTTCATATGGCATCTTGATT +
Preference number: 6 (lower is better)
Translates to: RRIHFGKRSSQH*VPAEISYGILI
Trigger: AATCAAGATGCCATATGAAATTTCAGCTGGGACTCAGTGCTGTGAAGAGCGTTTCCCAAAGTGTATTCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486138.1
CDS GCA 72 bp TTGGTCTTCACTTTTCCACGCATCTTAAAGCTGCCATaGAGGATCATTTCTCTTCTGCCAAAGACCAATCTT +
Preference number: 6 (lower is better)
Translates to: LVFTFPRILKLP*RIISLLPKTNL
Trigger: AAGATTGGTCTTTGGCAGAAGAGAAATGATCCTGCATGGCAGCTTTAAGATGCGTGGAAAAGTGAAGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461580.5
ENST00000470648.5
ENST00000472283.1
CDS GCA 72 bp CAGTCTGAAAAGCAATGTCACATTGCTAAGGGATGCTaGTGTATGTCTTCAAGTTCCTTGGCCTTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: QSEKQCHIAKGC*CMSSSSLAFFN
Trigger: ATTGAAAAAGGCCAAGGAACTTGAAGACATACAGCAGCATCCCTTAGCAATGTGACATTGCTTTTCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303635.12
ENST00000490905.5
ENST00000495233.5
CDS CCA 72 bp GTTTCATTTATCCTCCCAACAACCCTAAAAAGCAAGTaGGAGACACACAGTATCTACATTTCACAGAGGATA +
Preference number: 6 (lower is better)
Translates to: VSFILPTTLKSK*ETHSIYISQRI
Trigger: TATCCTCTGTGAAATGTAGATACTGTGTGTCTCCCACTTGCTTTTTAGGGTTGTTGGGAGGATAAATGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467267.1
CDS CAA 72 bp TCTGGAATCAGACAGCAGCTTCTGACTTGTTTTCCATaGCTCTTTGCACATTTGCTTTCTGCTACCAAAATT +
Preference number: 6 (lower is better)
Translates to: SGIRQQLLTCFP*LFAHLLSATKI
Trigger: AATTTTGGTAGCAGAAAGCAAATGTGCAAAGAGCAATGGAAAACAAGTCAGAAGCTGCTGTCTGATTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461580.5
ENST00000467267.1
ENST00000482934.1