RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMSAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000076826

Ensembl transcript IDs: ENST00000160298.9, ENST00000446248.4, ENST00000593434.1, ENST00000595692.1

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACCGACTaGCTGTCCTCCAGGGGATGGCGGCCGCAGCACACAGGGCCCGGC +
Preference number: 1 (lower is better)
Translates to: PPRHGWGQTGPRNTD*LSSRGWRPQHTGPG
Trigger: GCCGGGCCCTGTGTGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
3UTR-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACTGTCCTCCAGGGGATaGCGGCCGCAGCACACAGGG +
Preference number: 2 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGILSSRG*RPQHTG
Trigger: CCCTGTGTGCTGCGGCCGCCATCCCCTGGAGGACAG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
3UTR-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCTGTCCTCCAGGGGATaGCGGCCGCAGCACACAGGG +
Preference number: 2 (lower is better)
Translates to: FKKWGRTDKGTELSPESLLSSRG*RPQHTG
Trigger: CCCTGTGTGCTGCGGCCGCCATCCCCTGGAGGACAG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
3UTR-3UTR TCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCCAGGAATACCGACTaGCTGTCCTCCAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPRNTD*LSSRGW
Trigger: CCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
3UTR-3UTR CAA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCCCACCCAGACACGGTaGGGGACAGACAGGACCCAG +
Preference number: 3 (lower is better)
Translates to: KKWGRTDKGTELSPESLNPTQTR*GTDRTQ
Trigger: CTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
3UTR-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCCCACCCAGACACGGTaGGGGACAGACAGGACCCAG +
Preference number: 3 (lower is better)
Translates to: FKKWGRTDKGTELSPESLPTQTR*GTDRTQ
Trigger: CTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGACCCACGCAGCAGGTaGTGGGGCGGATCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGDPRSR*WGGSGG
Trigger: GCCCCCGGATCCGCCCCACCACCTGCTGCGTGGGTC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTTTCGGGCTGCGGGGTaGCTGGCTGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNFRAAG*LAGPGP
Trigger: GGGCCCGGGCCCAGCCAGTCACCCCGCAGCCCGAAA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCAGCGGGATCTCGATaGGGCCCGGCCGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPAGSR*GPAGRL
Trigger: CAGCCGCCCGGCCGGGCCTCATCGAGATCCCGCTGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGGGCCAGGAGCCGCTaGTGCTGGTCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGARSR*CWSVSL
Trigger: GAGGCTCACGGACCAGCAGCAGCGGCTCCTGGCCCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGAGGTTGGCTCACCCTaGCCCTCGCCTGCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAEVGSP*PSPAGR
Trigger: GCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACTCGCCGGGCGGGGCTaGGGGATGCAGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAALAGRG*GMQLWA
Trigger: GGCCCAAAGCTGCATCCCCCAGCCCCGCCCGGCGAG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGGGAGAGGGGACGGCTaGGCTGCCGGTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAGRGDG*AAGSRP
Trigger: AGGCCTGGAACCGGCAGCTCAGCCGTCCCCTCTCCC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATTTCGGGCTGCGGGGTaGCTGGCTGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIFRAAG*LAGPGP
Trigger: GGGCCCGGGCCCAGCCAGTCACCCCGCAGCCCGAAA...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCACCATGGCGGGCGTaGCGGTCCGGGGCCCATACC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPPWRA*RSGAHT
Trigger: GGTATGGGCCCCGGACCGTCACGCCCGCCATGGTGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTATCGGATCGAGGGCTaGGCCGGGGCCGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDYRIEG*AGAAPS
Trigger: AGACGGGGCGGCCCCGGCGCAGCCCTCGATCCGATA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000160298.9
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACACCCTGGTCAAGGGTaGCAGCCGCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGHPGQG*QPQLRW
Trigger: CCAGCGGAGCTGCGGCTGGCACCCTTGACCAGGGTG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGCTGGAGAGGCTCGCTaGGCCGCTTCCTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGAGEAR*AASCSV
Trigger: GACCGAGCAGGAAGCGGCCCAGCGAGCCTCTCCAGC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCACGCAGCAGGTGGTaGGGCGGATCCGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPRSRW*GGSGGL
Trigger: GAGGCCCCCGGATCCGCCCCACCACCTGCTGCGTGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGACACAAGCGGGGCTaGGCCCGGGGCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGHKRG*ARGLLL
Trigger: CAAGAGGAGGCCCCGGGCCCAGCCCCGCTTGTGTCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACGGGAGAGGGGACGGCTaGGCTGCCGGTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDGRGDG*AAGSRP
Trigger: AGGCCTGGAACCGGCAGCTCAGCCGTCCCCTCTCCC...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACCTCCAGCCGGGCGCTaGGCTCACTCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAPPAGR*AHSSPS
Trigger: GCTCGGAGATGAGTGAGCTCAGCGCCCGGCTGGAGG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACACTGCCTTGGGCCGTaGGGTTGGCTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAHCLGP*GWLTLA
Trigger: GGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCCACCATGGCGGGCGTaGCGGTCCGGGGCCCATACC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQPPWRA*RSGAHT
Trigger: GGTATGGGCCCCGGACCGTCACGCCCGCCATGGTGG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCCGTCTGCAGGGGCTaGTGGAGAGGCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPVCRG*WRGSLG
Trigger: GCCCAGCGAGCCTCTCCAGCAGCCCCTGCAGACGGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACGGCCTCCTCCGCCTCTaGTTCCGCCTCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDGLLRL*FRLPRG
Trigger: GCCTCTGGGGAGGCGGAAGCAGAGGCGGAGGAGGCC...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGCGTGTGTTTCGGGCTaGGGGGTGACTGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDACVSG*GVTGWA
Trigger: GGCCCAGCCAGTCACCCCGCAGCCCGAAACACACGC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGCTCGGCGAGAACTTaGGCAGGTGGGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGSART*AGGGGC
Trigger: ACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACGGCGCTCGTACTCCTaGCGCGTGAAGTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGRRSYS*RVKSPF
Trigger: GAAGGGGGACTTCACGCGGCAGGAGTACGAGCGCCG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGGGCTATTTGGGGGTaGCGCCGCCCTTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGAIWG*RRPSWE
Trigger: CTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGCTGGCCGCCGCCTTaGCCCGCGAGAAATCGTACT +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGWPPP*PARNRT
Trigger: AGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGTCTGCAGGGGCTGCTaGAGAGGCTCGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNVCRGC*RGSLGR
Trigger: GCGGCCCAGCGAGCCTCTCCAGCAGCCCCTGCAGAC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAAATAGCAGTGGATGGTaGCGGCCAGCGCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGNSSGW*RPARPH
Trigger: GTGGGGCCGCGCTGGCCGCCACCATCCACTGCTATT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAAGGCCAGGGATGGCTTaGAGGGCCCCTCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGRPGMA*RAPQGS
Trigger: ACTCCCCTGAGGGGCCCTCCAAGCCATCCCTGGCCT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCCCCCAGCCCCTCGTaGGGCACCGGGCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQSPSPS*GTGPRS
Trigger: AGACCTGGGCCCGGTGCCCCACGAGGGGCTGGGGGA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCCACGCAGCAGGTGGTaGGGCGGATCCGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQPRSRW*GGSGGL
Trigger: GAGGCCCCCGGATCCGCCCCACCACCTGCTGCGTGG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGCTCGCCGGGCGGGGCTaGGGGATGCAGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQLAGRG*GMQLWA
Trigger: GGCCCAAAGCTGCATCCCCCAGCCCCGCCCGGCGAG...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCGGGCAGCAGGGGCTaGAGTCGCCATCGGGACTGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPGSRG*SRHRDC
Trigger: GCAGTCCCGATGGCGACTCCAGCCCCTGCTGCCCGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCGGGCAGCAGGGGCTaGAGTCGCCATCGGGACTGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPGSRG*SRHRDC
Trigger: GCAGTCCCGATGGCGACTCCAGCCCCTGCTGCCCGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACACCTCCTCCTCGGCTaGAGCCCGGGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIHLLLG*SPGSRG
Trigger: GCCCCTGCTGCCCGGGCTCCAGCCGAGGAGGAGGTG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACCGGGTGGGGCTATTTaGGGGTGCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAPGGAI*GCRRPS
Trigger: AGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCGTGGACCGCCCGGGTaGGGCTATTTGGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNRGPPG*GYLGVP
Trigger: CGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCTGTCCTCCAGGGGATaGCGGCCGCAGCACACAGGG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDLSSRG*RPQHTG
Trigger: CCCTGTGTGCTGCGGCCGCCATCCCCTGGAGGACAG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGCAGTAGAGCTCGGCTaGGAGCAGCAGCCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGAVELG*EQQPCH
Trigger: GTGACACGGCTGCTGCTCTCAGCCGAGCTCTACTGC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCTCCAGCCGGGCGCTaGGCTCACTCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPPAGR*AHSSPS
Trigger: GCTCGGAGATGAGTGAGCTCAGCGCCCGGCTGGAGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTCGTGGGGCCAGGGATaGCCCACGCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDSWGQG*PTQQVV
Trigger: CACCACCTGCTGCGTGGGTCATCCCTGGCCCCACGA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACGTACTCCTGCCGCGTaGAGTCCCCCTTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIRTPAA*SPPSGG
Trigger: GCCCCCGGAAGGGGGACTTCACGCGGCAGGAGTACG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGCTTCGTGCCAGGGCTaGGTCGTCACAGCAACCCGA +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGASCQG*VVTATR
Trigger: TCGGGTTGCTGTGACGACTCAGCCCTGGCACGAAGC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCATGGCGGGGATCTGGGTaGAGCGCTTGCGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAWRGSG*SACGPS
Trigger: ACTCGGACCGCAAGCGCTTCACCCAGATCCCCGCCA...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGAGAATGGGCTGGTaGCTCAGGTCGGCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGMRMGW*LRSASR
Trigger: GCGCGAGGCCGACCTGAGGCACCAGCCCATTCTCAT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGCTGGCGGTTTCGATaGCTCCCCCACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGWRFR*LPHQTG
Trigger: CCCTGTCTGGTGGGGGAGGCATCGAAACCGCCAGCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCTCGGAGTTGGTGGCTaGTGGGGACGAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDLGVGG*WGRSHR
Trigger: GCGGTGGCTTCGTCCCCAGCAGCCACCAACTCCGAG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGCCTCCTCCGCCTCTaGTTCCGCCTCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTGLLRL*FRLPRG
Trigger: GCCTCTGGGGAGGCGGAAGCAGAGGCGGAGGAGGCC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCACCCTGGTCAAGGGTaGCAGCCGCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNHPGQG*QPQLRW
Trigger: CCAGCGGAGCTGCGGCTGGCACCCTTGACCAGGGTG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAAGTCGCCATCGGGACTaGGGACACAAGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAASRHRD*GHKRGW
Trigger: CCAGCCCCGCTTGTGTCCGCAGTCCCGATGGCGACT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGGGCTATTTGGGGGTaGCGCCGCCCTTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGAIWG*RRPSWE
Trigger: CTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGGTGTTTCAAGCTGTaGCAGTGCCTGGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGCFKL*QCLAPG
Trigger: GCCTGGCGCCAGGCACTGCCACAGCTTGAAACACCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCTGCAGGGGCTGCTaGAGAGGCTCGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTVCRGC*RGSLGR
Trigger: GCGGCCCAGCGAGCCTCTCCAGCAGCCCCTGCAGAC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGGCCTGTCGGACAGTaGTTTGGAGGTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGPVGQ*FGGPLG
Trigger: CCCGAGGGGACCTCCAAACCACTGTCCGACAGGCCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGGGCCTGTCGGACAGTaGTTTGGAGGTCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAGPVGQ*FGGPLG
Trigger: CCCGAGGGGACCTCCAAACCACTGTCCGACAGGCCC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCCCTCGGATGGGGCTaGCGGTTTCGATGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPLGWG*RFRCLP
Trigger: GGGGAGGCATCGAAACCGCCAGCCCCATCCGAGGGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCGGGGACCCCTCGGATaGGGCTGGCGGTTTCGATGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDRGPLG*GWRFRC
Trigger: GCATCGAAACCGCCAGCCCCATCCGAGGGGTCCCCG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGAGTTGGTGGCTGCTaGGGACGAAGCCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGVGGC*GRSHRL
Trigger: AAGGCGGTGGCTTCGTCCCCAGCAGCCACCAACTCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCTCCCCACCAGGGACTaGACCGGAATCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDLPTRD*TGIGLL
Trigger: GAGGAGGCCGATTCCGGTCCAGTCCCTGGTGGGGAG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGAGGTTGGCTCACCCTaGCCCTCGCCTGCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNEVGSP*PSPAGR
Trigger: GCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTCCCCCAGCCCCTCGTaGGGCACCGGGCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLSPSPS*GTGPRS
Trigger: AGACCTGGGCCCGGTGCCCCACGAGGGGCTGGGGGA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGACCCACGCAGCAGGTaGTGGGGCGGATCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLDPRSR*WGGSGG
Trigger: GCCCCCGGATCCGCCCCACCACCTGCTGCGTGGGTC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCAGCCGCAGCTCCGCTaGCCGCGTGTGTTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDQPQLR*PRVFRA
Trigger: AGCCCGAAACACACGCGGCCAGCGGAGCTGCGGCTG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGGACACAAGCGGGGCTaGGCCCGGGGCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQGHKRG*ARGLLL
Trigger: CAAGAGGAGGCCCCGGGCCCAGCCCCGCTTGTGTCC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCACCTCCTCCTCGGCTaGAGCCCGGGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNHLLLG*SPGSRG
Trigger: GCCCCTGCTGCCCGGGCTCCAGCCGAGGAGGAGGTG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGTCTTGGCGGGGATCTaGGTGAAGCGCTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGVLAGI*VKRLRS
Trigger: GGACCGCAAGCGCTTCACCCAGATCCCCGCCAAGAC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCGGGTGGGGCTATTTaGGGGTGCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPGGAI*GCRRPS
Trigger: AGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCTGTCCTCCAGGGGATaGCGGCCGCAGCACACAGGG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNLSSRG*RPQHTG
Trigger: CCCTGTGTGCTGCGGCCGCCATCCCCTGGAGGACAG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCTGGGGGCCACCAGATaGCAGAAGCGGGTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNLGATR*QKRVAE
Trigger: TTCCGCCACCCGCTTCTGTCATCTGGTGGCCCCCAG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGCCAAAGGGGGTGCTaGATGACACAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGQRGC*MTQPGR
Trigger: TCTCCCAGGCTGTGTCATTCAGCACCCCCTTTGGCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACACTGCCTTGGGCCGTaGGGTTGGCTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIHCLGP*GWLTLA
Trigger: GGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCGTGGGGCCAGGGATaGCCCACGCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQSWGQG*PTQQVV
Trigger: CACCACCTGCTGCGTGGGTCATCCCTGGCCCCACGA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCGTACTCCTGCCGCGTaGAGTCCCCCTTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNRTPAA*SPPSGG
Trigger: GCCCCCGGAAGGGGGACTTCACGCGGCAGGAGTACG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGCGGCTTGGGGACATaGGACCTGACGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIGGLGT*DLTGRE
Trigger: CTCCCTCCCCGTCAGGTCTCATGTCCCCAAGCCGCC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGCGGCTTGGGGACATaGGACCTGACGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTGGLGT*DLTGRE
Trigger: CTCCCTCCCCGTCAGGTCTCATGTCCCCAAGCCGCC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTGGCGGGGATCTGGGTaGAGCGCTTGCGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNWRGSG*SACGPS
Trigger: ACTCGGACCGCAAGCGCTTCACCCAGATCCCCGCCA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAACCGGGGGCTTCACATaGTCCTGCGCGTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAATGGFT*SCAYWS
Trigger: CGACCAGTACGCGCAGGAGCATGTGAAGCCCCCGGT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCGCTGGGCCGCTTCCTaGTCGGTCTTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNRWAAS*SVFSCS
Trigger: GCTGCAGGAGAAGACCGAGCAGGAAGCGGCCCAGCG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGCCGGTTCCAGGCCTTaGCCAGGGCCTCCATATGGG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNAGSRP*PGPPYG
Trigger: CCCATATGGAGGCCCTGGGCAAGGCCTGGAACCGGC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGAGGGGACGGCTGAGCTaGCGGTTCCAGGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQRGRLS*RFQALP
Trigger: GGGCAAGGCCTGGAACCGGCAGCTCAGCCGTCCCCT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTCCCGCGGCTGCACCTaGAGGAAGGCGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDSRGCT*RKALLP
Trigger: GGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTCCCGCGGCTGCACCTaGAGGAAGGCGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNSRGCT*RKALLP
Trigger: GGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGAGGCTTCCCGCGGCTaGACCTGCAGGAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNEASRG*TCRKAL
Trigger: AAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGGGGCCAGGAGCCGCTaGTGCTGGTCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNGARSR*CWSVSL
Trigger: GAGGCTCACGGACCAGCAGCAGCGGCTCCTGGCCCC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGCGTGTGTTTCGGGCTaGGGGGTGACTGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQACVSG*GVTGWA
Trigger: GGCCCAGCCAGTCACCCCGCAGCCCGAAACACACGC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACGGCTCGGCGAGAACTTaGGCAGGTGGGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDGSART*AGGGGC
Trigger: ACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCC...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGGAAGAGCGCGTCTaGACGGGCACCTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDMEERV*TGTWLG
Trigger: GCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCAT...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATGGAAGAGCGCGTCTaGACGGGCACCTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNMEERV*TGTWLG
Trigger: GCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCAT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTCCTTCTCCACCTCCTaGCACTGCTTGCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDSFSTS*HCLRRR
Trigger: GCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGCTTGTGCTCCAAGCTaGTCAGGGCCAAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGACAPS*SGPRDL
Trigger: CAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCAGGTCCTGGAGGCTaGTCACCGTCGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPGPGG*SPSGSR
Trigger: CCTGCTTCCCGACGGTGACCAGCCTCCAGGACCTGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGCCACTGGCCAGGTCCTaGAGGCTGGTCACCGTCGGG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQPLARS*RLVTVG
Trigger: CCCGACGGTGACCAGCCTCCAGGACCTGGCCAGTGG...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGCTGTTGTTCTGAGGTaGGGAGGCCTCAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAAVVLR*GGLSAP
Trigger: CGGGGCACTGAGGCCTCCCCACCTCAGAACAACAGC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCTCGGAGTGGGGACTaGGGGCCACCAGATGACAGA +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDPRSGD*GPPDDR
Trigger: TCTGTCATCTGGTGGCCCCCAGTCCCCACTCCGAGG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGCCAGGGATGGCTTaGAGGGCCCCTCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNRPGMA*RAPQGS
Trigger: ACTCCCCTGAGGGGCCCTCCAAGCCATCCCTGGCCT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACACCAGACAGGGAGATaGTTTCGAGGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGHQTGR*FRGGLG
Trigger: CCCGAGACCCCCTCGAAACCATCTCCCTGTCTGGTG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGAGTTGGTGGCTGCTaGGGACGAAGCCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGVGGC*GRSHRL
Trigger: AAGGCGGTGGCTTCGTCCCCAGCAGCCACCAACTCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCACCGGGCCCAGGTCTaGCGAGAAGGTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDHRAQV*REGHCL
Trigger: AAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGGTG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGTCTGCACGGGCACCTaGCTCGGCGAGAACTTGCGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNVCTGT*LGENLR
Trigger: GCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGAC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAAGGCTGGCCCGCTTTTaGGCCATCTCGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAARLARF*AISSSG
Trigger: GCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGCCGCTCCAGCAGGCTaGCCCGCTTTTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNAAPAG*PAFGPS
Trigger: AGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGGAGCCCGAGACGTaGGCCTCTTCACCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDREPET*ASSPRG
Trigger: ACCTCGGGGTGAAGAGGCCCACGTCTCGGGCTCCCT...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACGACGCTCATGGACATaGTCTTGGCGGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGRRSWT*SWRGSG
Trigger: CCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGATGCCGCCGCCCTTCTTaGGAGTGGTGGGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGCRRPS*EWWVSC
Trigger: GCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCA...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCGTGGACCGCCCGGGTaGGGCTATTTGGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNRGPPG*GYLGVP
Trigger: CGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGCAGTAGAGCTCGGCTaGGAGCAGCAGCCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNAVELG*EQQPCH
Trigger: GTGACACGGCTGCTGCTCTCAGCCGAGCTCTACTGC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACACTGGGGGCCACCAGATaGCAGAAGCGGGTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTLGATR*QKRVAE
Trigger: TTCCGCCACCCGCTTCTGTCATCTGGTGGCCCCCAG...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGCACAGGGTCTCCCATaGCGACATCCACGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAAQGLP*RHPRRC
Trigger: ACAGCGACGTGGATGTCGTCATGGGAGACCCTGTGC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCTGCTGCTGGTCCGTaGGCCTCTGCATGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTAAAGP*ASACPA
Trigger: AGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGGGGACATGAGACCTaGCGGGGAGGGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQWGHET*RGGSPR
Trigger: TCTCGGGCTCCCTCCCCGTCAGGTCTCATGTCCCCA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCTGGCGCCAGGCTCTaGAGTAGAGCTCGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPGARL*SRARLR
Trigger: TCTCAGCCGAGCTCTACTGCAGAGCCTGGCGCCAGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGCAAAGCAGGCACTGTaGCCCTCCGCGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNAKQAL*PSAPAG
Trigger: CCCTGCTGGCGCGGAGGGGCACAGTGCCTGCTTTGC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATGAGAATGGGCTGGTaGCTCAGGTCGGCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNMRMGW*LRSASR
Trigger: GCGCGAGGCCGACCTGAGGCACCAGCCCATTCTCAT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGCTCGGTCTTCTCCTaGAGCCGCCGGACGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQCSVFS*SRRTVV
Trigger: CACGACCGTCCGGCGGCTGCAGGAGAAGACCGAGCA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCGCTGGGCCGCTTCCTaGTCGGTCTTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQRWAAS*SVFSCS
Trigger: GCTGCAGGAGAAGACCGAGCAGGAAGCGGCCCAGCG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACAGGGGACGGCTGAGCTaGCGGTTCCAGGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNRGRLS*RFQALP
Trigger: GGGCAAGGCCTGGAACCGGCAGCTCAGCCGTCCCCT...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGTGGAGGTAGAAGCTaGCGTCGGCCGCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNSGGRS*RRPPHL
Trigger: CAGATGGGGCGGCCGACGGCAGCTTCTACCTCCACT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCAGGAAGGCGCTTTTaGCCAGCCGCTGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTAGRRF*PAAGGA
Trigger: AGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCCTTCTCCACCTCCTaGCACTGCTTGCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQSFSTS*HCLRRR
Trigger: GCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGAGTCGCCATCGGGACTaGGGACACAAGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQSRHRD*GHKRGW
Trigger: CCAGCCCCGCTTGTGTCCGCAGTCCCGATGGCGACT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACACGGCGCTCGTACTCCTaGCGCGTGAAGTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTRRSYS*RVKSPF
Trigger: GAAGGGGGACTTCACGCGGCAGGAGTACGAGCGCCG...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCACCACACGGTCCTTaGGGTATCGGATCATGGGGG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDPPHGP*GIGSWG
Trigger: CCCCCATGATCCGATACCGCAAGGACCGTGTGGTGG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGCTGGCCGCCGCCTTaGCCCGCGAGAAATCGTACT +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIGWPPP*PARNRT
Trigger: AGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGCAGTGCAGAGGGGTTaGGGGGTGTTTCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGAVQRG*GVFQAV
Trigger: CACAGCTTGAAACACCCCCCAACCCCTCTGCACTGC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGCCAGGTCCTGGAGGCTaGTCACCGTCGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQPGPGG*SPSGSR
Trigger: CCTGCTTCCCGACGGTGACCAGCCTCCAGGACCTGG...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAATAGCAGTGGATaGTGGCGGCCAGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTDNSSG*WRPARP
Trigger: GGGCCGCGCTGGCCGCCACCATCCACTGCTATTGTC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCTCGGAGTGGGGACTaGGGGCCACCAGATGACAGA +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPRSGD*GPPDDR
Trigger: TCTGTCATCTGGTGGCCCCCAGTCCCCACTCCGAGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTGTGGATCCTCGGAGTaGGGACTGGGGGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDCGSSE*GLGATR
Trigger: TCTGGTGGCCCCCAGTCCCCACTCCGAGGATCCACA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGAGCTTCCTCGATGGTaGGCAGGTCACCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNELPRW*AGHQAP
Trigger: CGGAGCCTGGTGACCTGCCCACCATCGAGGAAGCTC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACGAGCTTCCTCGATGGTaGGCAGGTCACCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDELPRW*AGHQAP
Trigger: CGGAGCCTGGTGACCTGCCCACCATCGAGGAAGCTC...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACGGGGCTCGGCACTGTaGATGATCTGCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAARGSAL*MICRAS
Trigger: GGAAGCTCTGCAGATCATCCACAGTGCCGAGCCCCG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGGGGTCTCGGGGTGTaGCATGTACACTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGGLGV*HVHWCF
Trigger: AAAGCACCAGTGTACATGCCACACCCCGAGACCCCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACACCAGACAGGGAGATaGTTTCGAGGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAHQTGR*FRGGLG
Trigger: CCCGAGACCCCCTCGAAACCATCTCCCTGTCTGGTG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCCCCTCGGATGGGGCTaGCGGTTTCGATGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNPLGWG*RFRCLP
Trigger: GGGGAGGCATCGAAACCGCCAGCCCCATCCGAGGGG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGCCGCTGGCGGTGCTTaGCGAATATGGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAAAGGA*RIWPQS
Trigger: GGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCTCCCCACCAGGGACTaGACCGGAATCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQLPTRD*TGIGLL
Trigger: GAGGAGGCCGATTCCGGTCCAGTCCCTGGTGGGGAG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCAGCCGCAGCTCCGCTaGCCGCGTGTGTTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLQPQLR*PRVFRA
Trigger: AGCCCGAAACACACGCGGCCAGCGGAGCTGCGGCTG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAAGGCTGTCTACGTCGTaGGGTGGCGTAAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAARLSTS*GGVSTL
Trigger: CAGGGTGCTTACGCCACCCCACGACGTAGACAGCCT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCTGCACGGGCACCTaGCTCGGCGAGAACTTGCGC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTVCTGT*LGENLR
Trigger: GCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGAC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGCCTCCGCCAGGAGGATaGAAGAGCGCGTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQPPPGG*KSASAR
Trigger: CCGTGCAGACGCGCTCTTCCATCCTCCTGGCGGAGG...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGCTGGCCCGCTTTTaGGCCATCTCGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNRLARF*AISSSG
Trigger: GCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGCCGCTCCAGCAGGCTaGCCCGCTTTTGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQAAPAG*PAFGPS
Trigger: AGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAACCCCGAGGTTATTGTaGGCCTCGTTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGTPRLL*ASLATV
Trigger: CACTGTGGCCAACGAGGCCCACAATAACCTCGGGGT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGAGGGAGCCCGAGACGTaGGCCTCTTCACCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQREPET*ASSPRG
Trigger: ACCTCGGGGTGAAGAGGCCCACGTCTCGGGCTCCCT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGTCTTGGCGGGGATCTaGGTGAAGCGCTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNVLAGI*VKRLRS
Trigger: GGACCGCAAGCGCTTCACCCAGATCCCCGCCAAGAC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACTCAAAGTCAGAGGGTaGAGACTCCAGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGLKVRG*RLQPHP
Trigger: TGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAAAGGGGGTGCTGAATaGCACAGCCTGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDKGGAE*HSLGEG
Trigger: CCCCTCTCCCAGGCTGTGTCATTCAGCACCCCCTTT...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCGGCACTCAGCTTGCTaGCCGCTCGATTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDRHSAC*PLDCIP
Trigger: GGGAATACAATCGAGCGGTCAGCAAGCTGAGTGCCG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGCTGCTGCTGGTCCGTaGGCCTCTGCATGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLAAAGP*ASACPA
Trigger: AGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTGGGGACATGAGACCTaGCGGGGAGGGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLWGHET*RGGSPR
Trigger: TCTCGGGCTCCCTCCCCGTCAGGTCTCATGTCCCCA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACCGGGGGCTTCACATaGTCCTGCGCGTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQTGGFT*SCAYWS
Trigger: CGACCAGTACGCGCAGGAGCATGTGAAGCCCCCGGT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACCTGGCGCCAGGCTCTaGAGTAGAGCTCGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIPGARL*SRARLR
Trigger: TCTCAGCCGAGCTCTACTGCAGAGCCTGGCGCCAGG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCACCACACGGTCCTTaGGGTATCGGATCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPPHGP*GIGSRA
Trigger: AGCCCTCGATCCGATACCGCAAGGACCGTGTGGTGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000160298.9
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGCCGGTTCCAGGCCTTaGCCAGGGCCTCCATATGGG +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLAGSRP*PGPPYG
Trigger: CCCATATGGAGGCCCTGGGCAAGGCCTGGAACCGGC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGGCTGGCGGTTTCGATaGCTCCCCCACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLGWRFR*LPHQTG
Trigger: CCCTGTCTGGTGGGGGAGGCATCGAAACCGCCAGCC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCTCGGAGTTGGTGGCTaGTGGGGACGAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLLGVGG*WGRSHR
Trigger: GCGGTGGCTTCGTCCCCAGCAGCCACCAACTCCGAG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGCCCAGCCGCTGGCGGTaGTTGGCGAATATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQPSRWR*LANMAS
Trigger: TGAGGCCATATTCGCCAAGCACCGCCAGCGGCTGGG...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGCAGGAAGGCGCTTTTaGCCAGCCGCTGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLAGRRF*PAAGGA
Trigger: AGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGAGGCTTCCCGCGGCTaGACCTGCAGGAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNEASRG*TCRKAL
Trigger: AAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCTCTGCATGTCCCGCTaGAGCGAGCTCAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQLCMSR*SELKAA
Trigger: TGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGGTCCGTGAGCCTCTaGATGTCCCGCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTWSVSL*MSRCSE
Trigger: CTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATGGTCCGTGAGCCTCTaGATGTCCCGCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIWSVSL*MSRCSE
Trigger: CTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCA...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCTGGGGAGGAGGCATTaGTGCCATTTTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDLGRRH*CHFPSP
Trigger: GGGACTGGGAAAATGGCAGCAATGCCTCCTCCCCAG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGTGGGTTTCTTGCCCTaGCAGAGGTGTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDVGFLP*QRCPWM
Trigger: CATCCAGGGACACCTCTGGCAGGGCAAGAAACCCAC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGAGTGGTGGGTTTCTTaGCCTGCCAGAGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAEWWVS*PARGVP
Trigger: AGGGACACCTCTGGCAGGGCAAGAAACCCACCACTC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACCCATGAGAATGGGCTaGTGCCTCAGGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIPMRMG*CLRSAS
Trigger: CGAGGCCGACCTGAGGCACCAGCCCATTCTCATGGG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCAGGGCCAAGGGACCTaGCAGGGTCTTTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDQGQGT*QGLCPL
Trigger: GAGTGGACAAAGACCCTGCCAGGTCCCTTGGCCCTG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCTGTTGTTCTGAGGTaGGGAGGCCTCAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTAVVLR*GGLSAP
Trigger: CGGGGCACTGAGGCCTCCCCACCTCAGAACAACAGC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGTGGATCCTCGGAGTaGGGACTGGGGGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTCGSSE*GLGATR
Trigger: TCTGGTGGCCCCCAGTCCCCACTCCGAGGATCCACA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCTGAATGACACAGCCTaGGAGAGGGGACGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNLNDTA*ERGRLS
Trigger: GCTCAGCCGTCCCCTCTCCCAGGCTGTGTCATTCAG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCGGGGCTCGGCACTGTaGATGATCTGCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDRGSAL*MICRAS
Trigger: GGAAGCTCTGCAGATCATCCACAGTGCCGAGCCCCG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTGTCGGACAGTGGTTTaGAGGTCCCCTCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNCRTVV*RSPRAG
Trigger: ACCTGCCCGAGGGGACCTCCAAACCACTGTCCGACA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAAGGAGCCGCTGCTGCTaGTCCGTGAGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIRSRCC*SVSLCM
Trigger: CATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCT...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGAGAACTTGCGCAGGTaGGGGAGGCTGTCTACGTCG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNENLRR*GRLSTS
Trigger: CGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCCTCCGCCAGGAGGATaGAAGAGCGCGTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLPPPGG*KSASAR
Trigger: CCGTGCAGACGCGCTCTTCCATCCTCCTGGCGGAGG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCTCGTTGGCCACAGTaGACAGTGACAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDPRWPQ*TVTGWT
Trigger: AGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGG...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCGACGCTCATGGACATaGTCTTGGCGGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNRRSWT*SWRGSG
Trigger: CCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAAGGCATCGACGCTCATaGACATGGTCTTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAARHRRS*TWSWRG
Trigger: TCCCCGCCAAGACCATGTCCATGAGCGTCGATGCCT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACACCACCCAGACACGGTTaGGGACAGACAGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTPPRHG*GQTGPR
Trigger: CCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGG...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACCACCCAGACACGGTTaGGGACAGACAGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIPPRHG*GQTGPR
Trigger: CCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACCCCCACAGCAGGACTaGACTCAAAGTCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAPPQQD*TQSQRV
Trigger: CACCCTCTGACTTTGAGTCCAGTCCTGCTGTGGGGG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAACTGGTCCAGCGACTTaGTCTCGGGCACTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAATGPAT*SRALER
Trigger: CCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGAAAGGGGGTGCTGAATaGCACAGCCTGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQKGGAE*HSLGEG
Trigger: CCCCTCTCCCAGGCTGTGTCATTCAGCACCCCCTTT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGCCAAAGGGGGTGCTaGATGACACAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIGQRGC*MTQPGR
Trigger: TCTCCCAGGCTGTGTCATTCAGCACCCCCTTTGGCC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGCACAGGGTCTCCCATaGCGACATCCACGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQAQGLP*RHPRRC
Trigger: ACAGCGACGTGGATGTCGTCATGGGAGACCCTGTGC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGCTTCGTGCCAGGGCTaGGTCGTCACAGCAACCCGA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLASCQG*VVTATR
Trigger: TCGGGTTGCTGTGACGACTCAGCCCTGGCACGAAGC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGTGTCCCTGGATGGTaGAGGCATCGACGCTCATGG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIGVPGW*RHRRSW
Trigger: CCATGAGCGTCGATGCCTTCACCATCCAGGGACACC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGTGTCCCTGGATGGTaGAGGCATCGACGCTCATGG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTGVPGW*RHRRSW
Trigger: CCATGAGCGTCGATGCCTTCACCATCCAGGGACACC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCCCAGGAATACCGACTaGCTGTCCTCCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQPRNTD*LSSRGW
Trigger: CCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATTCAAGCTGTGGCAGTaGCTGGCGCCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTFKLWQ*LAPGSA
Trigger: TGCAGAGCCTGGCGCCAGGCACTGCCACAGCTTGAA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGAGGCACAGAAATCCTaGACGAGCTGGAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGEAQKS*TSWRLY
Trigger: GTACAACCTCCAGCTCGTGCAGGATTTCTGTGCCTC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAGTGGAGGTAGAAGCTaGCGTCGGCCGCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLSGGRS*RRPPHL
Trigger: CAGATGGGGCGGCCGACGGCAGCTTCTACCTCCACT...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCATCCGGCCTCAGCCTCTaGCTTCACCAGCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAASGLSL*LHQLFL
Trigger: AAGAAACAGCTGGTGAAGGCAGAGGCTGAGGCCGGA...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTCCGGCCTCAGCCTCTaGCTTCACCAGCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDSGLSL*LHQLFL
Trigger: AAGAAACAGCTGGTGAAGGCAGAGGCTGAGGCCGGA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCTCTGCATGTCCCGCTaGAGCGAGCTCAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLLCMSR*SELKAA
Trigger: TGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGGAGGAGGCATTGCTaGCATTTTCCCAGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGRRHC*HFPSPV
Trigger: AACGGGACTGGGAAAATGGCAGCAATGCCTCCTCCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCTGGGGAGGAGGCATTaGTGCCATTTTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDLGRRH*CHFPSP
Trigger: GGGACTGGGAAAATGGCAGCAATGCCTCCTCCCCAG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAAGTTGTACTTGTAGATaGCTTCCACCATGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGSCTCR*LPPWRA
Trigger: CGCCCGCCATGGTGGAAGGCATCTACAAGTACAACT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACGCGAGAAATCGTACTaGTCCAGCGACTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGREKSY*SSDLIS
Trigger: CGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGATCAATGACAGCTAGGTaGGCTCCCATGAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGSMTAR*APMRMG
Trigger: GCCCATTCTCATGGGAGCCCACCTAGCTGTCATTGA...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACACAGGGCCAAGGGACCTaGCAGGGTCTTTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTQGQGT*QGLCPL
Trigger: GAGTGGACAAAGACCCTGCCAGGTCCCTTGGCCCTG...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCTTGTGCTCCAAGCTaGTCAGGGCCAAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTACAPS*SGPRDL
Trigger: CAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTGTCCGCCACAGACATaGGGTCCTTCAAGCACACCT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDCPPQT*GPSSTP
Trigger: AGGTGTGCTTGAAGGACCCCATGTCTGTGGCGGACA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCCCAGGGCCTCCATATaGGACATGGACGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQPRASI*DMDGED
Trigger: GTCTTCCCCGTCCATGTCCCATATGGAGGCCCTGGG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACCCAGGGCCTCCATATaGGACATGGACGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIPRASI*DMDGED
Trigger: GTCTTCCCCGTCCATGTCCCATATGGAGGCCCTGGG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCTGAATGACACAGCCTaGGAGAGGGGACGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQLNDTA*ERGRLS
Trigger: GCTCAGCCGTCCCCTCTCCCAGGCTGTGTCATTCAG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGCAGAGCTTCCTCGATaGTGGGCAGGTCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQAELPR*WAGHQA
Trigger: AGCCTGGTGACCTGCCCACCATCGAGGAAGCTCTGC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGTCGGACAGTGGTTTaGAGGTCCCCTCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTCRTVV*RSPRAG
Trigger: ACCTGCCCGAGGGGACCTCCAAACCACTGTCCGACA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGTGTGGCATGTACACTaGTGCTTTGGTGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDVWHVH*CFGGPV
Trigger: GACAGGCCCACCAAAGCACCAGTGTACATGCCACAC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGGGGGTCTCGGGGTGTaGCATGTACACTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNGGLGV*HVHWCF
Trigger: AAAGCACCAGTGTACATGCCACACCCCGAGACCCCC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCACCTCGGAGTTGGTaGCTGCTGGGGACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQSPRSW*LLGTKP
Trigger: TGGCTTCGTCCCCAGCAGCCACCAACTCCGAGGTGA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTTTTCACCTCGGAGTTaGTGGCTGCTGGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDFSPRS*WLLGTK
Trigger: CTTCGTCCCCAGCAGCCACCAACTCCGAGGTGAAAA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCTTTTGCCCAGCCGCTaGCGGTGCTTGGCGAATATG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDLLPSR*RCLANM
Trigger: CATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCACCGGGCCCAGGTCTaGCGAGAAGGTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNHRAQV*REGHCL
Trigger: AAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGGTG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAGGAGCCGCTGCTGCTaGTCCGTGAGCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLRSRCC*SVSLCM
Trigger: CATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCT...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGAGGCTGTCTACGTCGTaGGGTGGCGTAAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQRLSTS*GGVSTL
Trigger: CAGGGTGCTTACGCCACCCCACGACGTAGACAGCCT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGAGAACTTGCGCAGGTaGGGGAGGCTGTCTACGTCG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTENLRR*GRLSTS
Trigger: CGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACTCCATCAGCTTCAGCTaGGCCCGGCGCTCGTACTCC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNSISFS*ARRSYS
Trigger: GGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGA...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTCCATCAGCTTCAGCTaGGCCCGGCGCTCGTACTCC +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLSISFS*ARRSYS
Trigger: GGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGCCGCCGCCCTTCTTaGGAGTGGTGGGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQCRRPS*EWWVSC
Trigger: GCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCTAGGTGGGCTCCCATaGGAATGGGCTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNLGGLP*EWAGAS
Trigger: TGAGGCACCAGCCCATTCTCATGGGAGCCCACCTAG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGCTCGGCACTGTGGATaGTCTGCAGAGCTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQARHCG*SAELPR
Trigger: TCGAGGAAGCTCTGCAGATCATCCACAGTGCCGAGC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATCAATCCGTCGCTTCTaGGCCTCGATGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTSIRRF*ASMALR
Trigger: ACGCAGAGCCATCGAGGCTCAGAAGCGACGGATTGA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCAATCCGTCGCTTCTaGGCCTCGATGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQSIRRF*ASMALR
Trigger: ACGCAGAGCCATCGAGGCTCAGAAGCGACGGATTGA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCGGCACTCAGCTTGCTaGCCGCTCGATTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQRHSAC*PLDCIP
Trigger: GGGAATACAATCGAGCGGTCAGCAAGCTGAGTGCCG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGGCCACAGTGGACAGTaGCAGGGTGGACTGGGAATA +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQGHSGQ*QGGLGI
Trigger: TATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGAGGCACAGAAATCCTaGACGAGCTGGAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAEAQKS*TSWRLY
Trigger: GTACAACCTCCAGCTCGTGCAGGATTTCTGTGCCTC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGGCAAGTCCTTCACTTaGACAAAGTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAGKSFT*TKSGLS
Trigger: GCTCAAGCCCGACTTTGTGCAAGTGAAGGACTTGCC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGTGGGTTTCTTGCCCTaGCAGAGGTGTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQVGFLP*QRCPWM
Trigger: CATCCAGGGACACCTCTGGCAGGGCAAGAAACCCAC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGAGTGGTGGGTTTCTTaGCCTGCCAGAGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTEWWVS*PARGVP
Trigger: AGGGACACCTCTGGCAGGGCAAGAAACCCACCACTC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGCAGTGCAGAGGGGTTaGGGGGTGTTTCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIAVQRG*GVFQAV
Trigger: CACAGCTTGAAACACCCCCCAACCCCTCTGCACTGC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGACCTTGAGTGGCGGTaGGACGTACAGCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQDLEWR*DVQQVL
Trigger: GAGGACTTGCTGTACGTCCCACCGCCACTCAAGGTC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAACTTCAGGGAGCCTGTaGATCCTCGGAGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTTSGSL*ILGVGT
Trigger: AGTCCCCACTCCGAGGATCCACAGGCTCCCTGAAGT...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACTTCAGGGAGCCTGTaGATCCTCGGAGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQTSGSL*ILGVGT
Trigger: AGTCCCCACTCCGAGGATCCACAGGCTCCCTGAAGT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACCCTCCATATGGGACATaGACGGGGAAGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDPPYGT*TGKTSG
Trigger: CCCTGAAGTCTTCCCCGTCCATGTCCCATATGGAGG...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACGTGTGGCATGTACACTaGTGCTTTGGTGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDVWHVH*CFGGPV
Trigger: GACAGGCCCACCAAAGCACCAGTGTACATGCCACAC...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACTCACCTCGGAGTTGGTaGCTGCTGGGGACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNSPRSW*LLGTKP
Trigger: TGGCTTCGTCCCCAGCAGCCACCAACTCCGAGGTGA...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTTTTCACCTCGGAGTTaGTGGCTGCTGGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNFSPRS*WLLGTK
Trigger: CTTCGTCCCCAGCAGCCACCAACTCCGAGGTGAAAA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGCCGCTGGCGGTGCTTaGCGAATATGGCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLAAGGA*RIWPQS
Trigger: GGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACTTTTGCCCAGCCGCTaGCGGTGCTTGGCGAATATG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGILLPSR*RCLANM
Trigger: CATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTCTACGTCGTGGGGTaGCGTAAGCACCCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTVYVVG*RKHPGQ
Trigger: TTGACCAGGGTGCTTACGCCACCCCACGACGTAGAC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACCTCGTTGGCCACAGTaGACAGTGACAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIPRWPQ*TVTGWT
Trigger: AGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTATTGTGGGCCTCGTTaGCCACAGTGGACAGTGACA +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDYCGPR*PQWTVT
Trigger: TGTCACTGTCCACTGTGGCCAACGAGGCCCACAATA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGTGCCAGAGGTGTCCCTaGATGGTGAAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQCQRCP*MVKAST
Trigger: CGTCGATGCCTTCACCATCCAGGGACACCTCTGGCA...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGCCAGAGGTGTCCCTaGATGGTGAAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQCQRCP*MVKAST
Trigger: CGTCGATGCCTTCACCATCCAGGGACACCTCTGGCA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACTCAAAGTCAGAGGGTaGAGACTCCAGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGILKVRG*RLQPHP
Trigger: TGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGCGGTATCGGATCATaGGGGGTTTGCTCCCCGACT +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTCGIGS*GVCSPT
Trigger: AGTCGGGGAGCAAACCCCCCATGATCCGATACCGCA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCAGAAAAGCAGCTTGTaGTCCAAGCTGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQQKSSL*SKLVRA
Trigger: GGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGGCAAGTCCTTCACTTaGACAAAGTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNGKSFT*TKSGLS
Trigger: GCTCAAGCCCGACTTTGTGCAAGTGAAGGACTTGCC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGGCATGTACACTGGTaGTTTGGTGGGCCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTWHVHW*FGGPVG
Trigger: TCCGACAGGCCCACCAAAGCACCAGTGTACATGCCA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGGGAGGAGGCATTGCTaGCATTTTCCCAGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQGRRHC*HFPSPV
Trigger: AACGGGACTGGGAAAATGGCAGCAATGCCTCCTCCC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGTCCGCCACAGACATaGGGTCCTTCAAGCACACCT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQCPPQT*GPSSTP
Trigger: AGGTGTGCTTGAAGGACCCCATGTCTGTGGCGGACA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGACCTTGAGTGGCGGTaGGACGTACAGCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNDLEWR*DVQQVL
Trigger: GAGGACTTGCTGTACGTCCCACCGCCACTCAAGGTC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGACACTGGTGCTTTGGTaGGCCTGTCGGACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQTLVLW*ACRTVV
Trigger: AACCACTGTCCGACAGGCCCACCAAAGCACCAGTGT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACACTGGTGCTTTGGTaGGCCTGTCGGACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQTLVLW*ACRTVV
Trigger: AACCACTGTCCGACAGGCCCACCAAAGCACCAGTGT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATGTACACTGGTGCTTTaGTGGGCCTGTCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGICTLVL*WACRTV
Trigger: CACTGTCCGACAGGCCCACCAAAGCACCAGTGTACA...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGTCTACGTCGTGGGGTaGCGTAAGCACCCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLVYVVG*RKHPGQ
Trigger: TTGACCAGGGTGCTTACGCCACCCCACGACGTAGAC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTGTTGGACTTGGCGCTaGGTTCTTTGTACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDCWTWR*VLCTAV
Trigger: CACGGCTGTACAAAGAACCCAGCGCCAAGTCCAACA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAGGCATCGACGCTCATaGACATGGTCTTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLRHRRS*TWSWRG
Trigger: TCCCCGCCAAGACCATGTCCATGAGCGTCGATGCCT...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCCCCCACAGCAGGACTaGACTCAAAGTCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNPPQQD*TQSQRV
Trigger: CACCCTCTGACTTTGAGTCCAGTCCTGCTGTGGGGG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACACTGGTCCAGCGACTTaGTCTCGGGCACTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNTGPAT*SRALER
Trigger: CCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGT...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCAGAAAAGCAGCTTGTaGTCCAAGCTGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNQKSSL*SKLVRA
Trigger: GGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCACTGTGGATGATCTaGAGAGCTTCCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTALWMI*RASSMV
Trigger: CACCATCGAGGAAGCTCTGCAGATCATCCACAGTGC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGCACTGTGGATGATCTaGAGAGCTTCCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQALWMI*RASSMV
Trigger: CACCATCGAGGAAGCTCTGCAGATCATCCACAGTGC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACTGGCATGTACACTGGTaGTTTGGTGGGCCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNWHVHW*FGGPVG
Trigger: TCCGACAGGCCCACCAAAGCACCAGTGTACATGCCA...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACTGGGAATAGATTTTaGTCAGCCGAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNTGNRF*SAESPA
Trigger: TGCTGGGCTCTCGGCTGAGCAAAATCTATTCCCAGT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGGAAGTGGTTGGCCTTaGTTTTCTCAATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGGSGWP*FSQFPP
Trigger: TGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGAGTTGTACTTGTAGATaGCTTCCACCATGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQSCTCR*LPPWRA
Trigger: CGCCCGCCATGGTGGAAGGCATCTACAAGTACAACT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACACGCGAGAAATCGTACTaGTCCAGCGACTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTREKSY*SSDLIS
Trigger: CGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCG...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGTCAATGACAGCTAGGTaGGCTCCCATGAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQSMTAR*APMRMG
Trigger: GCCCATTCTCATGGGAGCCCACCTAGCTGTCATTGA...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAAAATCCTGCACGAGCTaGAGGTTGTACAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIKSCTS*RLYRLS
Trigger: GGACAGCCTGTACAACCTCCAGCTCGTGCAGGATTT...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGCAAGTTGACCTTGAGTaGCGGTGGGACGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQQVDLE*RWDVQQ
Trigger: TTGCTGTACGTCCCACCGCCACTCAAGGTCAACTTG...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACAAGTTGACCTTGAGTaGCGGTGGGACGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIQVDLE*RWDVQQ
Trigger: TTGCTGTACGTCCCACCGCCACTCAAGGTCAACTTG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACTGTACACTGGTGCTTTaGTGGGCCTGTCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNCTLVL*WACRTV
Trigger: CACTGTCCGACAGGCCCACCAAAGCACCAGTGTACA...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTGCGTTCTGCAAAGCTaGTCATTTTCACCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDCVLQS*SFSPRS
Trigger: ACTCCGAGGTGAAAATGACCAGCTTTGCAGAACGCA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGTGCTTGGCGAATATaGCCTCAATCCGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIGAWRI*PQSVAS
Trigger: AGAAGCGACGGATTGAGGCCATATTCGCCAAGCACC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGGGTGCTTGGCGAATATaGCCTCAATCCGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQGAWRI*PQSVAS
Trigger: AGAAGCGACGGATTGAGGCCATATTCGCCAAGCACC...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTGGACAGTGACAGGGTaGACTGGGAATAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDWTVTG*TGNRFC
Trigger: GCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGTATTGTGGGCCTCGTTaGCCACAGTGGACAGTGACA +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQYCGPR*PQWTVT
Trigger: TGTCACTGTCCACTGTGGCCAACGAGGCCCACAATA...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATTCTTTGTACAGCCGTaGACCTGTGTACTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTFFVQP*TCVLGH
Trigger: GTGCCCGAGTACACAGGTCCACGGCTGTACAAAGAA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACCCTTCTTGGGAGTGGTaGGTTTCTTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNPSWEW*VSCPAR
Trigger: TCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGG...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCCTTCTTGGGAGTGGTaGGTTTCTTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLPSWEW*VSCPAR
Trigger: TCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGCACCTCAAAACACATaGACAACTCGGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQAPQNT*TTRPAS
Trigger: TGATGCTGGCCGAGTTGTTCATGTGTTTTGAGGTGC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGAGACAGGAGAACTACTaGCGCTGTTGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQRQENY*RCCSEV
Trigger: CACCTCAGAACAACAGCGGCAGTAGTTCTCCTGTCT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGAGACAGGAGAACTACTaGCGCTGTTGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQRQENY*RCCSEV
Trigger: CACCTCAGAACAACAGCGGCAGTAGTTCTCCTGTCT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTCACCAGCTGTTTCTTaGGTTCTGCAAAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDSPAVS*VLQSWS
Trigger: TGACCAGCTTTGCAGAACGCAAGAAACAGCTGGTGA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAAGAATGCGATTCTTCTaGGGTTCGTTCACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTRMRFF*GSFTLP
Trigger: GGGCAAGGTGAACGAACCGCAGAAGAATCGCATTCT...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAAATCCTGCACGAGCTaGAGGTTGTACAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLKSCTS*RLYRLS
Trigger: GGACAGCCTGTACAACCTCCAGCTCGTGCAGGATTT...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTGCGTTCTGCAAAGCTaGTCATTTTCACCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNCVLQS*SFSPRS
Trigger: ACTCCGAGGTGAAAATGACCAGCTTTGCAGAACGCA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGATGTGATAGGGCATTGTaGATGATGAACTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGCDRAL*MMNLLD
Trigger: GTCCAACAAGTTCATCATCCACAATGCCCTATCACA...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR TCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGCACCTCAAAACACATaGACAACTCGGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNAPQNT*TTRPAS
Trigger: TGATGCTGGCCGAGTTGTTCATGTGTTTTGAGGTGC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACAGAATGCGATTCTTCTaGGGTTCGTTCACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNRMRFF*GSFTLP
Trigger: GGGCAAGGTGAACGAACCGCAGAAGAATCGCATTCT...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGTGGACAGTGACAGGGTaGACTGGGAATAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQWTVTG*TGNRFC
Trigger: GCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCA...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGGATCAGGAAGTGGTTaGCCTTGCTTTTCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDGSGSG*PCFSQF
Trigger: AAATTGAGAAAAGCAAGGCCAACCACTTCCTGATCC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTCACCAGCTGTTTCTTaGGTTCTGCAAAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FKKWGRTDKGTELSPESLSPAVS*VLQSWS
Trigger: TGACCAGCTTTGCAGAACGCAAGAAACAGCTGGTGA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR GCA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAGGAAGTGGTTGGCCTTaGTTTTCTCAATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIGSGWP*FSQFPP
Trigger: TGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCC...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CCA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACTGTGATAGGGCATTGTaGATGATGAACTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: KKWGRTDKGTELSPESLNCDRAL*MMNLLD
Trigger: GTCCAACAAGTTCATCATCCACAATGCCCTATCACA...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GCAGCTCCGCTGGCCGCGTGTGTTTCGGGCTGCGGGGTGACTGGCTaGGCCCGGGCCCAGGGCTGCGCCGGGTGGCCGGGACTCGCCGGG +
Preference number: 5 (lower is better)
Translates to: AAPLAACVSGCGVTG*ARAQGCAGWPGLAG
Trigger: CCCGGCGAGTCCCGGCCACCCGGCGCAGCCCTGGGCCCGGGCCCAGCCAGTCACCCCGCAGCCCGAAACACACGCGGCCAGCGGAGCTGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp CAGCCGAGAGCCCAGCAGGCCGCGGGCTGGGCTTCGTGCCAGGGCTaGGTCGTCACAGCAACCCGAGCGAGGCCGGGTGGCCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: QPRAQQAAGWASCQG*VVTATRARPGGPPP
Trigger: GGGCGGAGGGCCACCCGGCCTCGCTCGGGTTGCTGTGACGACTCAGCCCTGGCACGAAGCCCAGCCCGCGGCCTGCTGGGCTCTCGGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS TCA 90 bp GGGCACCGGGCCCAGGTCTGGCGAGAAGGTCACTGCCTTGGGCCGTaGGGTTGGCTCACCCTGGCCCTCGCCTGCGGGCCGCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: GHRAQVWREGHCLGP*GWLTLALACGPLPT
Trigger: GGTGGGGAGCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGGTGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp CTGGTCGGTATAGAAGGGCTCCCACAGCTCCGGGGGCACGTGCTCTaGGCCCCCGAACGCGGCCCGCAGCACCCACGCCAGGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LVGIEGLPQLRGHVL*APERGPQHPRQAGR
Trigger: GCGGCCAGCCTGGCGTGGGTGCTGCGGGCCGCGTTCGGGGGCGCAGAGCACGTGCCCCCGGAGCTGTGGGAGCCCTTCTATACCGACCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp GCCAGCCTCGCGGCCTCCTCCCTCCGCTGTTCCTTCTCCACCTCCTaGCACTGCTTGCGCCGCCGCGCCTCCTCTGCTCGCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASLAASSLRCSFSTS*HCLRRRASSARRCC
Trigger: GCAGCAGCGGCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGAACAGCGGAGGGAGGAGGCCGCGAGGCTGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 90 bp CGTGCTCTGCGCCCCCGAACGCGGCCCGCAGCACCCACGCCAGGCTaGCCGCCGCCTTGGCCCGCGAGAAATCGTACTGGTCCAGCGACT +
Preference number: 5 (lower is better)
Translates to: RALRPRTRPAAPTPG*PPPWPARNRTGPAT
Trigger: AGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCTGGCGTGGGTGCTGCGGGCCGCGTTCGGGGGCGCAGAGCACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp ATCCGGGGGCCTCGGGCGGGGCCAGGAGCCGCTGCTGCTGGTCCGTaGGCCTCTGCATGTCCCGCTGCAGCGAGCTCAAGGCGGCACTCA +
Preference number: 5 (lower is better)
Translates to: IRGPRAGPGAAAAGP*ASACPAAASSRRHS
Trigger: TGAGTGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCTGGCCCCGCCCGAGGCCCCCGGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp ACCTCCTGCCACTGCTTGCGCCGCCGCGCCTCCTCTGCTCGCCGCTaGTGCCGCTCCAGCAGGCTGGCCCGCTTTTGGGCCATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: TSCHCLRRRASSARR*CRSSRLARFWAISS
Trigger: GGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGCAGCAGCGGCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 90 bp CCGCTCCCCACCAGGGACTGGACCGGAATCGGCCTCCTCCGCCTCTaGTTCCGCCTCCCCAGAGGCTTCCCGCGGCTGCACCTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PLPTRDWTGIGLLRL*FRLPRGFPRLHLQE
Trigger: TTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGGCGGAAGCAGAGGCGGAGGAGGCCGATTCCGGTCCAGTCCCTGGTGGGGAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp GCCTCGGGCGGGGCCAGGAGCCGCTGCTGCTGGTCCGTGAGCCTCTaGATGTCCCGCTGCAGCGAGCTCAAGGCGGCACTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ASGGARSRCCWSVSL*MSRCSELKAALSLL
Trigger: CAGCAAGCTGAGTGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCTGGCCCCGCCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp TCCTGCCACTGCTTGCGCCGCCGCGCCTCCTCTGCTCGCCGCTGCTaGCGCTCCAGCAGGCTGGCCCGCTTTTGGGCCATCTCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SCHCLRRRASSARRC*RSSRLARFWAISSS
Trigger: TGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGCAGCAGCGGCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 90 bp CACAGGGCCCGGCCCGTGGACCGCCCGGGTGGGGCTATTTGGGGGTaGCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTTGCCCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: HRARPVDRPGGAIWG*RRPSWEWWVSCPAR
Trigger: TCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCGGGCCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 90 bp GCAGCACACAGGGCCCGGCCCGTGGACCGCCCGGGTGGGGCTATTTaGGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: AAHRARPVDRPGGAI*GCRRPSWEWWVSCP
Trigger: AGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCGGGCCCTGTGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp GAGGCTGTCTACGTCGTGGGGTGGCGTAAGCACCCTGGTCAAGGGTaGCAGCCGCAGCTCCGCTGGCCGCGTGTGTTTCGGGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: EAVYVVGWRKHPGQG*QPQLRWPRVFRAAG
Trigger: CCCCGCAGCCCGAAACACACGCGGCCAGCGGAGCTGCGGCTGGCACCCTTGACCAGGGTGCTTACGCCACCCCACGACGTAGACAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp TCGAGGTCGTCCATCAGCTTCAGCTGGGCCCGGCGCTCGTACTCCTaGCGCGTGAAGTCCCCCTTCCGGGGGCCCACCTCCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: SRSSISFSWARRSYS*RVKSPFRGPTSSSA
Trigger: AGCCGAGGAGGAGGTGGGCCCCCGGAAGGGGGACTTCACGCGGCAGGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGACGACCTCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 90 bp TCTGGCGAGAAGGTCACTGCCTTGGGCCGTGAGGTTGGCTCACCCTaGCCCTCGCCTGCGGGCCGCTCCCCACCAGGGACTGGACCGGAA +
Preference number: 5 (lower is better)
Translates to: SGEKVTALGREVGSP*PSPAGRSPPGTGPE
Trigger: TTCCGGTCCAGTCCCTGGTGGGGAGCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTGACCTTCTCGCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GCCCGGGGCCGCAGCACCTTATCGAGGTCGTCCATCAGCTTCAGCTaGGCCCGGCGCTCGTACTCCTGCCGCGTGAAGTCCCCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ARGRSTLSRSSISFS*ARRSYSCRVKSPFR
Trigger: CCGGAAGGGGGACTTCACGCGGCAGGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGACGACCTCGATAAGGTGCTGCGGCCCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS TCA 90 bp TGGCCGCCGCCTTGGCCCGCGAGAAATCGTACTGGTCCAGCGACTTaGTCTCGGGCACTAGAAAGGTCCTCCGCAGCGGCCCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: WPPPWPARNRTGPAT*SRALERSSAAARAR
Trigger: CCGGGCCCGGGCCGCTGCGGAGGACCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp CGTCGGCCGCCCCATCTGGGAGGAGCCGGGGCTCGGCACTGTGGATaGTCTGCAGAGCTTCCTCGATGGTGGGCAGGTCACCAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: RRPPHLGGAGARHCG*SAELPRWWAGHQAP
Trigger: CGGAGCCTGGTGACCTGCCCACCATCGAGGAAGCTCTGCAGATCATCCACAGTGCCGAGCCCCGGCTCCTCCCAGATGGGGCGGCCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp TCCGCCTCTGCTTCCGCCTCCCCAGAGGCTTCCCGCGGCTGCACCTaGAGGAAGGCGCTTTTGCCCAGCCGCTGGCGGTGCTTGGCGAAT +
Preference number: 5 (lower is better)
Translates to: SASASASPEASRGCT*RKALLPSRWRCLAN
Trigger: ATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGGCGGAAGCAGAGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp CTGCCGTCGGCCGCCCCATCTGGGAGGAGCCGGGGCTCGGCACTGTaGATGATCTGCAGAGCTTCCTCGATGGTGGGCAGGTCACCAGGC +
Preference number: 5 (lower is better)
Translates to: LPSAAPSGRSRGSAL*MICRASSMVGRSPG
Trigger: GCCTGGTGACCTGCCCACCATCGAGGAAGCTCTGCAGATCATCCACAGTGCCGAGCCCCGGCTCCTCCCAGATGGGGCGGCCGACGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GAGCGCGTCTGCACGGGCACCTGGCTCGGCGAGAACTTGCGCAGGTaGGGGAGGCTGTCTACGTCGTGGGGTGGCGTAAGCACCCTGGTC +
Preference number: 5 (lower is better)
Translates to: ERVCTGTWLGENLRR*GRLSTSWGGVSTLV
Trigger: GACCAGGGTGCTTACGCCACCCCACGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGACGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACCCGGGTGGGGCTATTaGGGGGTGCCGCCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAPGWGY*GVPPPF
Trigger: GAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp TTTCCCAGTCCCGTTCGCGGCTTCCAGGCAGGCGGCTTGGGGACATaGGACCTGACGGGGAGGGAGCCCGAGACGTGGGCCTCTTCACCC +
Preference number: 5 (lower is better)
Translates to: FPSPVRGFQAGGLGT*DLTGREPETWASSP
Trigger: GGGTGAAGAGGCCCACGTCTCGGGCTCCCTCCCCGTCAGGTCTCATGTCCCCAAGCCGCCTGCCTGGAAGCCGCGAACGGGACTGGGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS CCA 90 bp GTCTCCTCCGCCAGGAGGATGGAAGAGCGCGTCTGCACGGGCACCTaGCTCGGCGAGAACTTGCGCAGGTGGGGGAGGCTGTCTACGTCG +
Preference number: 5 (lower is better)
Translates to: VSSARRMEERVCTGT*LGENLRRWGRLSTS
Trigger: CGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCATCCTCCTGGCGGAGGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GTGGACCGCCCGGGTGGGGCTATTTGGGGGTGCCGCCGCCCTTCTTaGGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGTCCCTGGATGG +
Preference number: 5 (lower is better)
Translates to: VDRPGGAIWGCRRPS*EWWVSCPARGVPGW
Trigger: CCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGATGGCTCGGCGAGAACTaGCGCAGGTGGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGWLGEN*RRWGRL
Trigger: CAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCA...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAACCTCCTGCCACTGCTaGCGCCGCCGCGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAATSCHC*RRRASS
Trigger: AGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCCGGGTGGGGCTATTaGGGGGTGCCGCCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPGWGY*GVPPPF
Trigger: GAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp CCTCCCCAGAGGCTTCCCGCGGCTGCACCTGCAGGAAGGCGCTTTTaGCCAGCCGCTGGCGGTGCTTGGCGAATATGGCCTCAATCCGTC +
Preference number: 5 (lower is better)
Translates to: PPQRLPAAAPAGRRF*PAAGGAWRIWPQSV
Trigger: GACGGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp GCCAGGAGCCGCTGCTGCTGGTCCGTGAGCCTCTGCATGTCCCGCTaGAGCGAGCTCAAGGCGGCACTCAGCTTGCTGACCGCTCGATTG +
Preference number: 5 (lower is better)
Translates to: ARSRCCWSVSLCMSR*SELKAALSLLTARL
Trigger: CAATCGAGCGGTCAGCAAGCTGAGTGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GCACTCAGCTTGCTGACCGCTCGATTGTATTCCCCCAGCCCCTCGTaGGGCACCGGGCCCAGGTCTGGCGAGAAGGTCACTGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: ALSLLTARLYSPSPS*GTGPRSGEKVTALG
Trigger: GCCCAAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGGTGCCCCACGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAAGCTGAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTGCAGGAAGGCGCTTTaGCCCAGCCGCTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDCRKAL*PSRWRC
Trigger: GCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCCTTGGGCCGTGAGGTaGGCTCACCCTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNPWAVR*AHPGPR
Trigger: GCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACACCTCCTGCCACTGCTaGCGCCGCCGCGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDTSCHC*RRRASS
Trigger: AGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGT...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACCCACCCAGACACGGTaGGGGACAGACAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGPTQTR*GTDRTQ
Trigger: CTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp TGCGGTCCGAGTTGTACTTGTAGATGCCTTCCACCATGGCGGGCGTaGCGGTCCGGGGCCCATACCCTGCCAGCCGCGACAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: CGPSCTCRCLPPWRA*RSGAHTLPAATAPL
Trigger: CAGAGGAGCTGTCGCGGCTGGCAGGGTATGGGCCCCGGACCGTCACGCCCGCCATGGTGGAAGGCATCTACAAGTACAACTCGGACCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 90 bp ACCCACGCCAGGCTGGCCGCCGCCTTGGCCCGCGAGAAATCGTACTaGTCCAGCGACTTGATCTCGGGCACTAGAAAGGTCCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: THARLAAALAREKSY*SSDLISGTRKVLRS
Trigger: GCTGCGGAGGACCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCTGGCGTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp TCCTCTGCTCGCCGCTGCTGCCGCTCCAGCAGGCTGGCCCGCTTTTaGGCCATCTCGTCCTCAGGCTTGTCTTCATCCTGGGGACAGACG +
Preference number: 5 (lower is better)
Translates to: SSARRCCRSSRLARF*AISSSGLSSSWGQT
Trigger: CGTCTGTCCCCAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGCAGCAGCGGCGAGCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCACTGTCGGACAGTGGTTaGGAGGTCCCCTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAALSDSG*EVPSGR
Trigger: CCTGCCCGAGGGGACCTCCAAACCACTGTCCGACAG...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp CATGACGACATCCACGTCGCTGTCCAGGCCAAAGGGGGTGCTGAATaGCACAGCCTGGGAGAGGGGACGGCTGAGCTGCCGGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: HDDIHVAVQAKGGAE*HSLGEGTAELPVPG
Trigger: GCCTGGAACCGGCAGCTCAGCCGTCCCCTCTCCCAGGCTGTGTCATTCAGCACCCCCTTTGGCCTGGACAGCGACGTGGATGTCGTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GTGGCATGTACACTGGTGCTTTGGTGGGCCTGTCGGACAGTGGTTTaGAGGTCCCCTCGGGCAGGTAGGGGGAGGCCAGGGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: VACTLVLWWACRTVV*RSPRAGRGRPGMAW
Trigger: CCAAGCCATCCCTGGCCTCCCCCTACCTGCCCGAGGGGACCTCCAAACCACTGTCCGACAGGCCCACCAAAGCACCAGTGTACATGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GGGGAGGGAGCCCGAGACGTGGGCCTCTTCACCCCGAGGTTATTGTaGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTGGACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GEGARDVGLFTPRLL*ASLATVDSDRVDWE
Trigger: TTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCACGTCTCGGGCTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAAGGCTGGCCGCCGCCTaGGCCCGCGAGAAATCGTAC +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIRLAAA*AREKSY
Trigger: GTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCT...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGCCACCACACGGTCCTaGCGGTATCGGATCGAGGGC +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNATTRS*RYRIEG
Trigger: GCCCTCGATCCGATACCGCAAGGACCGTGTGGTGGC...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000160298.9
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATCTGTCGGACAGTGGTTaGGAGGTCCCCTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNLSDSG*EVPSGR
Trigger: CCTGCCCGAGGGGACCTCCAAACCACTGTCCGACAG...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATGCAGGAAGGCGCTTTaGCCCAGCCGCTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTCRKAL*PSRWRC
Trigger: GCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCCTTGGGCCGTGAGGTaGGCTCACCCTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLPWAVR*AHPGPR
Trigger: GCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGTGGCTCGGCGAGAACTaGCGCAGGTGGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQWLGEN*RRWGRL
Trigger: CAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCA...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAGCTGGGGAGGAGGCATaGCTGCCATTTTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGAGEEA*LPFSQS
Trigger: GGACTGGGAAAATGGCAGCAATGCCTCCTCCCCAGC...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGGAGTGGTGGGTTTCTaGCCCTGCCAGAGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAGVVGF*PCQRCP
Trigger: GGGACACCTCTGGCAGGGCAAGAAACCCACCACTCC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp TCCTGCAGCCGCCGGACGGTCGTGTCCACCCAGAAAAGCAGCTTGTaGTCCAAGCTGGTCAGGGCCAAGGGACCTGGCAGGGTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SCSRRTVVSTQKSSL*SKLVRAKGPGRVFV
Trigger: GACAAAGACCCTGCCAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACGACCGTCCGGCGGCTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp AGGGACAGGGGGCAGCCACGAGGAAGGCGAGAGGCACAGAAATCCTaGACGAGCTGGAGGTTGTACAGGCTGTCCGCCACAGACATGGGG +
Preference number: 5 (lower is better)
Translates to: RDRGQPRGRREAQKS*TSWRLYRLSATDMG
Trigger: CCCCATGTCTGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCAGGATTTCTGTGCCTCTCGCCTTCCTCGTGGCTGCCCCCTGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 90 bp TTGGGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTTGCCCTaGCAGAGGTGTCCCTGGATGGTGAAGGCATCGACGCTCATGGAC +
Preference number: 5 (lower is better)
Translates to: LGVPPPFLGVVGFLP*QRCPWMVKASTLMD
Trigger: GTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS-3UTR CAA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACAGGCTGGCCGCCGCCTaGGCCCGCGAGAAATCGTAC +
Preference number: 5 (lower is better)
Translates to: KKWGRTDKGTELSPESLNRLAAA*AREKSY
Trigger: GTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCT...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTGCACGAGCTGGAGGTaGTACAGGCTGTCCGCCACA +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDCTSWR*YRLSAT
Trigger: TGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAAGCATCACCACCAAGTaGACCTTGAGTGGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGSITTK*TLSGGG
Trigger: CCCACCGCCACTCAAGGTCAACTTGGTGGTGATGCT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGCAGGCTGGCCCGCTTTaGGGCCATCTCGTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQQAGPL*GHLVLR
Trigger: CCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTG...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGACTCATGGACATGGTCTaGGCGGGGATCTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGLMDMV*AGIWVK
Trigger: CTTCACCCAGATCCCCGCCAAGACCATGTCCATGAG...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GCCGGACGGTCGTGTCCACCCAGAAAAGCAGCTTGTGCTCCAAGCTaGTCAGGGCCAAGGGACCTGGCAGGGTCTTTGTCCACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: AGRSCPPRKAACAPS*SGPRDLAGSLSTRR
Trigger: CCTTCGAGTGGACAAAGACCCTGCCAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACGACCGTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACGACCTGGCAGGGTCTTaGTCCACTCGAAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDDLAGS*STRRQR
Trigger: CCTTTGCCTTCGAGTGGACAAAGACCCTGCCAGGTC...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAACCCAGAAAAGCAGCTaGTGCTCCAAGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGTQKSS*CSKLVR
Trigger: CCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCAGGCTGGCCCGCTTTaGGGCCATCTCGTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLQAGPL*GHLVLR
Trigger: CCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTTCACCCCGAGGTTATaGTGGGCCTCGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDFTPRL*WASLAT
Trigger: TGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGCCGCCGCCCTTCTaGGGAGTGGTGGGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTVPPPF*GVVGFL
Trigger: CAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCAC...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp TGGGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGTCCCTGGATGGTaGAGGCATCGACGCTCATGGACATGGTCTTGGCGGGGATCTGGG +
Preference number: 5 (lower is better)
Translates to: WEWWVSCPARGVPGW*RHRRSWTWSWRGSG
Trigger: CCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 90 bp GGGCAGCCACGAGGAAGGCGAGAGGCACAGAAATCCTGCACGAGCTaGAGGTTGTACAGGCTGTCCGCCACAGACATGGGGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GQPRGRREAQKSCTS*RLYRLSATDMGSFK
Trigger: CTTGAAGGACCCCATGTCTGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCAGGATTTCTGTGCCTCTCGCCTTCCTCGTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp CCCTTCTTGGGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGTCCCTaGATGGTGAAGGCATCGACGCTCATGGACATGGTCTTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PFLGVVGFLPCQRCP*MVKASTLMDMVLAG
Trigger: CCCCGCCAAGACCATGTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGATACTGGTCCAGCGACTaGATCTCGGGCACTAGAAAG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGYWSSD*ISGTRK
Trigger: CTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTA...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGTGCACGAGCTGGAGGTaGTACAGGCTGTCCGCCACA +
Preference number: 5 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQCTSWR*YRLSAT
Trigger: TGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCA...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAGGGCAAGTCCTTCACTaGCACAAAGTCGGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAAGQVLH*HKVGLE
Trigger: CTCAAGCCCGACTTTGTGCAAGTGAAGGACTTGCCC...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGAGCCGCTGGCGGTGCTaGGCGAATATGGCCTCAATC +
Preference number: 5 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQSRWRC*ANMASI
Trigger: GATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAAGCCGCTGGCGGTGCTaGGCGAATATGGCCTCAATC +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGISRWRC*ANMASI
Trigger: GATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCT...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATTGCTGACCGCTCGATaGTATTCCCCCAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGILLTAR*YSPSPS
Trigger: CGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAA...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACAAGGCGGCACTCAGCTaGCTGACCGCTCGATTGTAT +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDKAALS*LTARLY
Trigger: ATACAATCGAGCGGTCAGCAAGCTGAGTGCCGCCTT...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCATTATTGTGGGCCTCGTaGGCCACAGTGGACAGTGAC +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAALLWAS*ATVDSD
Trigger: GTCACTGTCCACTGTGGCCAACGAGGCCCACAATAA...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTTGGCGCTGGGTTCTTaGTACAGCCGTGGACCTGTG +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNLALGS*YSRGPV
Trigger: CACAGGTCCACGGCTGTACAAAGAACCCAGCGCCAA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGGAGTGGTGGGTTTCTaGCCCTGCCAGAGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLGVVGF*PCQRCP
Trigger: GGGACACCTCTGGCAGGGCAAGAAACCCACCACTCC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGTGCCGCCGCCCTTCTaGGGAGTGGTGGGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLVPPPF*GVVGFL
Trigger: CAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCAC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGGCCACCACACGGTCCTaGCGGTATCGGATCATGGGG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLATTRS*RYRIMG
Trigger: CCCCATGATCCGATACCGCAAGGACCGTGTGGTGGC...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446248.4
CDS CCA 90 bp CCAGAAAAGCAGCTTGTGCTCCAAGCTGGTCAGGGCCAAGGGACCTaGCAGGGTCTTTGTCCACTCGAAGGCAAAGGCAGCCATGAGGGC +
Preference number: 5 (lower is better)
Translates to: PEKQLVLQAGQGQGT*QGLCPLEGKGSHEG
Trigger: GCCCTCATGGCTGCCTTTGCCTTCGAGTGGACAAAGACCCTGCCAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp CGAGGTTATTGTGGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTaGACTGGGAATAGATTTTGCTCAGCCGAGAGCCCAGCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: RGYCGPRWPQWTVTG*TGNRFCSAESPAGR
Trigger: GCGGCCTGCTGGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS-3UTR CAA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGACCACCAAGTTGACCTaGAGTGGCGGTGGGACGTAC +
Preference number: 5 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQTTKLT*SGGGTY
Trigger: GTACGTCCCACCGCCACTCAAGGTCAACTTGGTGGT...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAAGCATCACCACCAAGTaGACCTTGAGTGGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGISITTK*TLSGGG
Trigger: CCCACCGCCACTCAAGGTCAACTTGGTGGTGATGCT...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGATGCACAAAGTCGGGCTaGAGCACCTCAAAACACATG +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGCTKSG*STSKHM
Trigger: CATGTGTTTTGAGGTGCTCAAGCCCGACTTTGTGCA...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTTGCTGACCGCTCGATaGTATTCCCCCAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLLLTAR*YSPSPS
Trigger: CGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACGCTGGGGAGGAGGCATaGCTGCCATTTTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: KKWGRTDKGTELSPESLNAGEEA*LPFSQS
Trigger: GGACTGGGAAAATGGCAGCAATGCCTCCTCCCCAGC...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATTGGCGCTGGGTTCTTaGTACAGCCGTGGACCTGTG +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTLALGS*YSRGPV
Trigger: CACAGGTCCACGGCTGTACAAAGAACCCAGCGCCAA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATATCTGGGTGAAGCGCTaGCGGTCCGAGTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNIWVKR*RSELYL
Trigger: CAAGTACAACTCGGACCGCAAGCGCTTCACCCAGAT...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACTCATGGACATGGTCTaGGCGGGGATCTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGILMDMV*AGIWVK
Trigger: CTTCACCCAGATCCCCGCCAAGACCATGTCCATGAG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp AATCCTGCACGAGCTGGAGGTTGTACAGGCTGTCCGCCACAGACATaGGGTCCTTCAAGCACACCTCCTCAAGTCGAAGCAGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: NPARAGGCTGCPPQT*GPSSTPPQVEAAGD
Trigger: GTCCCCAGCTGCTTCGACTTGAGGAGGTGTGCTTGAAGGACCCCATGTCTGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp CCCGAGACGTGGGCCTCTTCACCCCGAGGTTATTGTGGGCCTCGTTaGCCACAGTGGACAGTGACAGGGTGGACTGGGAATAGATTTTGC +
Preference number: 5 (lower is better)
Translates to: PETWASSPRGYCGPR*PQWTVTGWTGNRFC
Trigger: GCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCACGTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGACCACCAAGTTGACCTaGAGTGGCGGTGGGACGTAC +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLTTKLT*SGGGTY
Trigger: GTACGTCCCACCGCCACTCAAGGTCAACTTGGTGGT...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGGGCAAGTCCTTCACTaGCACAAAGTCGGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQGQVLH*HKVGLE
Trigger: CTCAAGCCCGACTTTGTGCAAGTGAAGGACTTGCCC...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAATGTACACTGGTGCTTaGGTGGGCCTGTCGGACAGT +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTMYTGA*VGLSDS
Trigger: ACTGTCCGACAGGCCCACCAAAGCACCAGTGTACAT...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGATGTACACTGGTGCTTaGGTGGGCCTGTCGGACAGT +
Preference number: 5 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQMYTGA*VGLSDS
Trigger: ACTGTCCGACAGGCCCACCAAAGCACCAGTGTACAT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAATTTTCACCTCGGAGTaGGTGGCTGCTGGGGACGAA +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTIFTSE*VAAGDE
Trigger: TTCGTCCCCAGCAGCCACCAACTCCGAGGTGAAAAT...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGAAGGCGGCACTCAGCTaGCTGACCGCTCGATTGTAT +
Preference number: 5 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQKAALS*LTARLY
Trigger: ATACAATCGAGCGGTCAGCAAGCTGAGTGCCGCCTT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp AAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGTTATTGTGGGCCTCGTaGGCCACAGTGGACAGTGAC +
Preference number: 5 (lower is better)
Translates to: KVRGWRLQPHPDTVGDRQLLWAS*ATVDSD
Trigger: GTCACTGTCCACTGTGGCCAACGAGGCCCACAATAA...CTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTTCACCCCGAGGTTATaGTGGGCCTCGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLFTPRL*WASLAT
Trigger: TGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATGAACTTGTTGGACTaGGCGCTGGGTTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGMNLLD*ALGSLY
Trigger: GTACAAAGAACCCAGCGCCAAGTCCAACAAGTTCAT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTGGATGATGAACTTGTaGGACTTGGCGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDWMMNL*DLALGS
Trigger: AGAACCCAGCGCCAAGTCCAACAAGTTCATCATCCA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACTTGTGGATGATGAACTaGTTGGACTTGGCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDLWMMN*LDLALG
Trigger: ACCCAGCGCCAAGTCCAACAAGTTCATCATCCACAA...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAATCTGGGTGAAGCGCTaGCGGTCCGAGTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTIWVKR*RSELYL
Trigger: CAAGTACAACTCGGACCGCAAGCGCTTCACCCAGAT...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 90 bp CTTCACCCCGAGGTTATTGTGGGCCTCGTTGGCCACAGTGGACAGTaGCAGGGTGGACTGGGAATAGATTTTGCTCAGCCGAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LHPEVIVGLVGHSGQ*QGGLGIDFAQPRAQ
Trigger: CTGGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS TCA 90 bp CTTCACCCCGAGGTTATTGTGGGCCTCGTTGGCCACAGTGGACAGTaGCAGGGTGGACTGGGAATAGATTTTGCTCAGCCGAGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LHPEVIVGLVGHSGQ*QGGLGIDFAQPRAW
Trigger: CCAGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593434.1
CDS GCA 90 bp CGTTGGCCACAGTGGACAGTGACAGGGTGGACTGGGAATAGATTTTaGTCAGCCGAGAGCCTGGGGACAGAGATTGCAGGTCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: RWPQWTVTGWTGNRF*SAESLGTEIAGQCP
Trigger: TGGGCACTGACCTGCAATCTCTGTCCCCAGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593434.1
CDS CCA 90 bp TGGGCCTCTTCACCCCGAGGTTATTGTGGGCCTCGTTGGCCACAGTaGACAGTGACAGGGTGGACTGGGAATAGATTTTGCTCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: WASSPRGYCGPRWPQ*TVTGWTGNRFCSAE
Trigger: CTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS CCA 90 bp CGAGGTTATTGTGGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTaGACTGGGAATAGATTTTGCTCAGCCGAGAGCCTGGGGACAGAG +
Preference number: 5 (lower is better)
Translates to: RGYCGPRWPQWTVTG*TGNRFCSAESLGTE
Trigger: CTCTGTCCCCAGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593434.1
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGACCCAGAAAAGCAGCTaGTGCTCCAAGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLTQKSS*CSKLVR
Trigger: CCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGT...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp AAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGAACATTTTCACCTCGGAGTaGGTGGCTGCTGGGGACGAA +
Preference number: 5 (lower is better)
Translates to: KKWGRTDKGTELSPESLNIFTSE*VAAGDE
Trigger: TTCGTCCCCAGCAGCCACCAACTCCGAGGTGAAAAT...GTTCAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATTTCACCAGCTGTTTCTaGCGTTCTGCAAAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VETPAPPRHGWGQTGPRNFTSCF*RSAKLV
Trigger: GACCAGCTTTGCAGAACGCAAGAAACAGCTGGTGAA...ATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACTGGATGATGAACTTGTaGGACTTGGCGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GLKVRGWRLQPHPDTVGDWMMNL*DLALGS
Trigger: AGAACCCAGCGCCAAGTCCAACAAGTTCATCATCCA...GTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACAGGAAGTGGTTGGCCTaGCTTTTCTCAATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VRGWRLQPHPDTVGDRQDRKWLA*LFSISS
Trigger: GGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCT...GTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAAGGATCAGGAAGTGGTaGGCCTTGCTTTTCTCAATT +
Preference number: 5 (lower is better)
Translates to: GWRLQPHPDTVGDRQDPGRIRKW*ALLFSI
Trigger: AATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCT...TCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTACTGGTCCAGCGACTaGATCTCGGGCACTAGAAAG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLYWSSD*ISGTRK
Trigger: CTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACAGGACCCAGGAATACCGACTGACTGTCCTCCAGGGGATGGCGGCCGCAGCAAGGATCAGGAAGTGGTaGGCCTTGCTTTTCTCAATT +
Preference number: 5 (lower is better)
Translates to: DRTQEYRLTVLQGMAAAARIRKW*ALLFSI
Trigger: AATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCT...TGCTGCGGCCGCCATCCCCTGGAGGACAGTCAGTCGGTATTCCTGGGTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp GACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACATCAAACAGAAGGCAATaGCGTGAGGAACCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: DSKSEGGDSSPTQTRLGTSNRRQ*REEPAS
Trigger: GGAAGCTGGTTCCTCACGCAATTGCCTTCTGTTTGA...TGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTGCACAAAGTCGGGCTaGAGCACCTCAAAACACATG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLCTKSG*STSKHM
Trigger: CATGTGTTTTGAGGTGCTCAAGCCCGACTTTGTGCA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTTCACCAGCTGTTTCTaGCGTTCTGCAAAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLFTSCF*RSAKLV
Trigger: GACCAGCTTTGCAGAACGCAAGAAACAGCTGGTGAA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp ACTCAAAGTCAGAGGGTGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGATGAACTTGTTGGACTaGGCGCTGGGTTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: TQSQRVETPAPPRHGWGQMNLLD*ALGSLY
Trigger: GTACAAAGAACCCAGCGCCAAGTCCAACAAGTTCAT...CTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCACCCTCTGACTTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGTTGTGGATGATGAACTaGTTGGACTTGGCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLLWMMN*LDLALG
Trigger: ACCCAGCGCCAAGTCCAACAAGTTCATCATCCACAA...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATAAGGAAGTGGTTGGCCTaGCTTTTCTCAATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIRKWLA*LFSISS
Trigger: GGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCT...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp GCACTTAGTTGGTGCCTACTGTATGCACAGCCCCACACTAAGTACTaGGACACAACAGGGATGGGATACACTGGGTGCCGCTCACACACA +
Preference number: 5 (lower is better)
Translates to: ALSWCLLYAQPHTKY*DTTGMGYTGCRSHT
Trigger: TGTGTGTGAGCGGCACCCAGTGTATCCCATCCCTGTTGTGTCCCAGTACTTAGTGTGGGGCTGTGCATACAGTAGGCACCAACTAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS-3UTR CAA 90 bp TGGAGACTCCAGCCCCACCCAGACACGGTTGGGGACAGACAGGACCCAGGAATACAGTGTGATAGGGCATaGTGGATGATGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: WRLQPHPDTVGDRQDPGIQCDRA*WMMNLL
Trigger: CAACAAGTTCATCATCCACAATGCCCTATCACACTG...TATTCCTGGGTCCTGTCTGTCCCCAACCGTGTCTGGGTGGGGCTGGAGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 90 bp CCCGGAACTGGCAGCTCGAGTCGCGAAAGAGGATCAGGAAGTGGTTaGCCTTGCTTTTCTCAATTTCCTCCAGAATGCGATTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: PGTGSSSRERGSGSG*PCFSQFPPECDSSA
Trigger: CGCAGAAGAATCGCATTCTGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCTCTTTCGCGACTCGAGCTGCCAGTTCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 90 bp AGCGCCCGGAACTGGCAGCTCGAGTCGCGAAAGAGGATCAGGAAGTaGTTGGCCTTGCTTTTCTCAATTTCCTCCAGAATGCGATTCTTC +
Preference number: 5 (lower is better)
Translates to: SARNWQLESRKRIRK*LALLFSISSRMRFF
Trigger: GAAGAATCGCATTCTGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCTCTTTCGCGACTCGAGCTGCCAGTTCCGGGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS-3UTR CAA 90 bp TTCAAGAAGTGGGGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCCCTGCAGTGTGATAGGGCATaGTGGATGATGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: FKKWGRTDKGTELSPESLQCDRA*WMMNLL
Trigger: CAACAAGTTCATCATCCACAATGCCCTATCACACTG...CAGGGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCCCCACTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp CCAGCCGCAGCTCCGCTGGCCGCGTGTGTTTCGGGCTaGGGGGTGACTGGCTGGGCCCGGGCCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PAAAPLAACVSG*GVTGWARAQGC
Trigger: GCAGCCCTGGGCCCGGGCCCAGCCAGTCACCCCGCAGCCCGAAACACACGCGGCCAGCGGAGCTGCGGCTGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp GCCCAGCAGGCCGCGGGCTGGGCTTCGTGCCAGGGCTaGGTCGTCACAGCAACCCGAGCGAGGCCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: AQQAAGWASCQG*VVTATRARPGG
Trigger: GCCACCCGGCCTCGCTCGGGTTGCTGTGACGACTCAGCCCTGGCACGAAGCCCAGCCCGCGGCCTGCTGGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp GGAAGCAGGGGGCACGTCGCGCCACCACACGGTCCTTaGGGTATCGGATCGAGGGCTGCGCCGGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: GSRGHVAPPHGP*GIGSRAAPGPP
Trigger: GGGCGGCCCCGGCGCAGCCCTCGATCCGATACCGCAAGGACCGTGTGGTGGCGCGACGTGCCCCCTGCTTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000160298.9
CDS GCA 72 bp GATCCGGGGGCCTCGGGCGGGGCCAGGAGCCGCTGCTaGTGGTCCGTGAGCCTCTGCATGTCCCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: DPGASGGARSRC*WSVSLCMSRCS
Trigger: GCTGCAGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCTGGCCCCGCCCGAGGCCCCCGGATC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CGCCCCCGAACGCGGCCCGCAGCACCCACGCCAGGCTaGCCGCCGCCTTGGCCCGCGAGAAATCGTACTGGT +
Preference number: 6 (lower is better)
Translates to: RPRTRPAAPTPG*PPPWPARNRTG
Trigger: ACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCTGGCGTGGGTGCTGCGGGCCGCGTTCGGGGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CTGGCCCTCGCCTGCGGGCCGCTCCCCACCAGGGACTaGACCGGAATCGGCCTCCTCCGCCTCTGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: LALACGPLPTRD*TGIGLLRLCFR
Trigger: GCGGAAGCAGAGGCGGAGGAGGCCGATTCCGGTCCAGTCCCTGGTGGGGAGCGGCCCGCAGGCGAGGGCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CGCAGCACACAGGGCCCGGCCCGTGGACCGCCCGGGTaGGGCTATTTGGGGGTGCCGCCGCCCTTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: RSTQGPARGPPG*GYLGVPPPFLG
Trigger: TCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCGGGCCCTGTGTGCTGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp GGGAAGCAGGGGGCACGTCGCGCCACCACACGGTCCTaGCGGTATCGGATCGAGGGCTGCGCCGGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: GKQGARRATTRS*RYRIEGCAGAA
Trigger: GGCGGCCCCGGCGCAGCCCTCGATCCGATACCGCAAGGACCGTGTGGTGGCGCGACGTGCCCCCTGCTTCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000160298.9
CDS CAA 72 bp CAGGGCCCGGCCCGTGGACCGCCCGGGTGGGGCTATTaGGGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: QGPARGPPGWGY*GVPPPFLGVVG
Trigger: ACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCGGGCCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp ATAGAAGGGCTCCCACAGCTCCGGGGGCACGTGCTCTaGGCCCCCGAACGCGGCCCGCAGCACCCACGCCAG +
Preference number: 6 (lower is better)
Translates to: IEGLPQLRGHVL*APERGPQHPRQ
Trigger: CTGGCGTGGGTGCTGCGGGCCGCGTTCGGGGGCGCAGAGCACGTGCCCCCGGAGCTGTGGGAGCCCTTCTAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp AGGGCCCGGCCCGTGGACCGCCCGGGTGGGGCTATTTaGGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: RARPVDRPGGAI*GCRRPSWEWWV
Trigger: AACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCGGGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 90 bp CCGGGCCCAGGTCTGGCGAGAAGGTCACTGCCTTGGGCCGTGAGGTaGGCTCACCCTGGCCCTCGCCTGCGGGCCGCTCCCCACCAGGGA +
Preference number: 6 (lower is better)
Translates to: PGPGLARRSLPWAVR*AHPGPRLRAAPHQG
Trigger: TCCCTGGTGGGGAGCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp CCCCCGAACGCGGCCCGCAGCACCCACGCCAGGCTGGCCGCCGCCTaGGCCCGCGAGAAATCGTACTGGTCCAGCGACTTGATCTCGGGC +
Preference number: 6 (lower is better)
Translates to: PPNAARSTHARLAAA*AREKSYWSSDLISG
Trigger: GCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCTGGCGTGGGTGCTGCGGGCCGCGTTCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp CGCAGCACACAGGGCCCGGCCCGTGGACCGCCCGGGTGGGGCTATTaGGGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: RSTQGPARGPPGWGY*GVPPPFLGVVGFLP
Trigger: GGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCGGGCCCTGTGTGCTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp GCCCAGGTCTGGCGAGAAGGTCACTGCCTTGGGCCGTaGGGTTGGCTCACCCTGGCCCTCGCCTGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: AQVWREGHCLGP*GWLTLALACGP
Trigger: CGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTGACCTTCTCGCCAGACCTGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp CCTCGGGCGGGGCCAGGAGCCGCTGCTGCTGGTCCGTaGGCCTCTGCATGTCCCGCTGCAGCGAGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: PRAGPGAAAAGP*ASACPAAASSR
Trigger: CCTTGAGCTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGCGGCTCCTGGCCCCGCCCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp CCCGTTCGCGGCTTCCAGGCAGGCGGCTTGGGGACATaGGACCTGACGGGGAGGGAGCCCGAGACGTGGGCC +
Preference number: 6 (lower is better)
Translates to: PVRGFQAGGLGT*DLTGREPETWA
Trigger: GGCCCACGTCTCGGGCTCCCTCCCCGTCAGGTCTCATGTCCCCAAGCCGCCTGCCTGGAAGCCGCGAACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS GCA 72 bp GCTTCCGCCTCCCCAGAGGCTTCCCGCGGCTGCACCTaGAGGAAGGCGCTTTTGCCCAGCCGCTGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: ASASPEASRGCT*RKALLPSRWRC
Trigger: GCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGGCGGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp CCCTCCGCTGTTCCTTCTCCACCTCCTGCCACTGCTTaGGCCGCCGCGCCTCCTCTGCTCGCCGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PSAVPSPPPATA*AAAPPLLAAAA
Trigger: GGCAGCAGCGGCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGAACAGCGGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp GCGGCCTCCTCCCTCCGCTGTTCCTTCTCCACCTCCTaGCACTGCTTGCGCCGCCGCGCCTCCTCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: AASSLRCSFSTS*HCLRRRASSAR
Trigger: GCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGAACAGCGGAGGGAGGAGGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 72 bp GCGGCCCGCAGCACCCACGCCAGGCTGGCCGCCGCCTaGGCCCGCGAGAAATCGTACTGGTCCAGCGACTTG +
Preference number: 6 (lower is better)
Translates to: AARSTHARLAAA*AREKSYWSSDL
Trigger: CAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCTGGCGTGGGTGCTGCGGGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp GGTCTGGCGAGAAGGTCACTGCCTTGGGCCGTGAGGTaGGCTCACCCTGGCCCTCGCCTGCGGGCCGCTCCC +
Preference number: 6 (lower is better)
Translates to: GLARRSLPWAVR*AHPGPRLRAAP
Trigger: GGGAGCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTGACCTTCTCGCCAGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp GCCTCTGCTTCCGCCTCCCCAGAGGCTTCCCGCGGCTaGACCTGCAGGAAGGCGCTTTTGCCCAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: ASASASPEASRG*TCRKALLPSRW
Trigger: CCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGGCGGAAGCAGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp TCCATCAGCTTCAGCTGGGCCCGGCGCTCGTACTCCTaGCGCGTGAAGTCCCCCTTCCGGGGGCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SISFSWARRSYS*RVKSPFRGPTS
Trigger: GGAGGTGGGCCCCCGGAAGGGGGACTTCACGCGGCAGGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp CGGCCCGTGGACCGCCCGGGTGGGGCTATTTGGGGGTaGCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: RPVDRPGGAIWG*RRPSWEWWVSC
Trigger: GCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACGGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 72 bp AAGGTCACTGCCTTGGGCCGTGAGGTTGGCTCACCCTaGCCCTCGCCTGCGGGCCGCTCCCCACCAGGGACT +
Preference number: 6 (lower is better)
Translates to: KVTALGREVGSP*PSPAGRSPPGT
Trigger: AGTCCCTGGTGGGGAGCGGCCCGCAGGCGAGGGCCAGGGTGAGCCAACCTCACGGCCCAAGGCAGTGACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp TCCCTCCGCTGTTCCTTCTCCACCTCCTGCCACTGCTaGCGCCGCCGCGCCTCCTCTGCTCGCCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SLRCSFSTSCHC*RRRASSARRCC
Trigger: GCAGCAGCGGCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGAACAGCGGAGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 90 bp CTGGCCGCCGCCTTGGCCCGCGAGAAATCGTACTGGTCCAGCGACTaGATCTCGGGCACTAGAAAGGTCCTCCGCAGCGGCCCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: LAAALAREKSYWSSD*ISGTRKVLRSGPGP
Trigger: CGGGCCCGGGCCGCTGCGGAGGACCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp ATGACAGCTAGGTGGGCTCCCATGAGAATGGGCTGGTaGCTCAGGTCGGCCTCGCGCACCGGGCGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: MTARWAPMRMGW*LRSASRTGRSG
Trigger: GCCCGAGCGCCCGGTGCGCGAGGCCGACCTGAGGCACCAGCCCATTCTCATGGGAGCCCACCTAGCTGTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp GGCGTCTCCTCCGCCAGGAGGATGGAAGAGCGCGTCTaGACGGGCACCTGGCTCGGCGAGAACTTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: GVSSARRMEERV*TGTWLGENLRR
Trigger: CCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCATCCTCCTGGCGGAGGAGACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GCCAGGAGGATGGAAGAGCGCGTCTGCACGGGCACCTaGCTCGGCGAGAACTTGCGCAGGTGGGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ARRMEERVCTGT*LGENLRRWGRL
Trigger: CAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCATCCTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp GAGCGCGTCTGCACGGGCACCTGGCTCGGCGAGAACTaGCGCAGGTGGGGGAGGCTGTCTACGTCGTGGGGT +
Preference number: 6 (lower is better)
Translates to: ERVCTGTWLGEN*RRWGRLSTSWG
Trigger: ACCCCACGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGACGCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp CGTGGACCGCCCGGGTGGGGCTATTTGGGGGTGCCGCCGCCCTTCTaGGGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGTCCCTGGATG +
Preference number: 6 (lower is better)
Translates to: RGPPGWGYLGVPPPF*GVVGFLPCQRCPWM
Trigger: CATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGGCGGTCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp GAGGCTCGCTGGGCCGCTTCCTGCTCGGTCTTCTCCTaGAGCCGCCGGACGGTCGTGTCCACCCAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: EARWAASCSVFS*SRRTVVSTQKS
Trigger: GCTTTTCTGGGTGGACACGACCGTCCGGCGGCTGCAGGAGAAGACCGAGCAGGAAGCGGCCCAGCGAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp TACGTCGTGGGGTGGCGTAAGCACCCTGGTCAAGGGTaGCAGCCGCAGCTCCGCTGGCCGCGTGTGTTTCGG +
Preference number: 6 (lower is better)
Translates to: YVVGWRKHPGQG*QPQLRWPRVFR
Trigger: CCGAAACACACGCGGCCAGCGGAGCTGCGGCTGGCACCCTTGACCAGGGTGCTTACGCCACCCCACGACGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GCCGCCCCATCTGGGAGGAGCCGGGGCTCGGCACTGTaGATGATCTGCAGAGCTTCCTCGATGGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: AAPSGRSRGSAL*MICRASSMVGR
Trigger: CCTGCCCACCATCGAGGAAGCTCTGCAGATCATCCACAGTGCCGAGCCCCGGCTCCTCCCAGATGGGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TGCACGGGCACCTGGCTCGGCGAGAACTTGCGCAGGTaGGGGAGGCTGTCTACGTCGTGGGGTGGCGTAAGC +
Preference number: 6 (lower is better)
Translates to: CTGTWLGENLRR*GRLSTSWGGVS
Trigger: GCTTACGCCACCCCACGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CCTCCTCTGCTCGCCGCTGCTGCCGCTCCAGCAGGCTaGCCCGCTTTTGGGCCATCTCGTCCTCAGGCTTGT +
Preference number: 6 (lower is better)
Translates to: PPLLAAAAAPAG*PAFGPSRPQAC
Trigger: ACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGCAGCAGCGGCGAGCAGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 72 bp GAGGCTTCCCGCGGCTGCACCTGCAGGAAGGCGCTTTaGCCCAGCCGCTGGCGGTGCTTGGCGAATATGGCC +
Preference number: 6 (lower is better)
Translates to: EASRGCTCRKAL*PSRWRCLANMA
Trigger: GGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp GCCTCCCCAGAGGCTTCCCGCGGCTGCACCTGCAGGAAGGCGCTTTaGCCCAGCCGCTGGCGGTGCTTGGCGAATATGGCCTCAATCCGT +
Preference number: 6 (lower is better)
Translates to: ASPEASRGCTCRKAL*PSRWRCLANMASIR
Trigger: ACGGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp AGGATGGAAGAGCGCGTCTGCACGGGCACCTGGCTCGGCGAGAACTaGCGCAGGTGGGGGAGGCTGTCTACGTCGTGGGGTGGCGTAAGC +
Preference number: 6 (lower is better)
Translates to: RMEERVCTGTWLGEN*RRWGRLSTSWGGVS
Trigger: GCTTACGCCACCCCACGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTCGCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp CGCTCCAGCAGGCTGGCCCGCTTTTGGGCCATCTCGTCCTCAGGCTaGTCTTCATCCTGGGGACAGACGCCGAGTCCAGCCAGCCACCCC +
Preference number: 6 (lower is better)
Translates to: RSSRLARFWAISSSG*SSSWGQTPSPASHP
Trigger: GGGGTGGCTGGCTGGACTCGGCGTCTGTCCCCAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS TCA 72 bp CCCGCTGCAGCGAGCTCAAGGCGGCACTCAGCTTGCTaGCCGCTCGATTGTATTCCCCCAGCCCCTCGTGGG +
Preference number: 6 (lower is better)
Translates to: PAAASSRRHSAC*PLDCIPPAPRG
Trigger: CCCACGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAAGCTGAGTGCCGCCTTGAGCTCGCTGCAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp AGGCTTCCCGCGGCTGCACCTGCAGGAAGGCGCTTTTaGCCAGCCGCTGGCGGTGCTTGGCGAATATGGCCT +
Preference number: 6 (lower is better)
Translates to: RLPAAAPAGRRF*PAAGGAWRIWP
Trigger: AGGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp CGCTGCTGCTGGTCCGTGAGCCTCTGCATGTCCCGCTaGAGCGAGCTCAAGGCGGCACTCAGCTTGCTGACC +
Preference number: 6 (lower is better)
Translates to: RCCWSVSLCMSR*SELKAALSLLT
Trigger: GGTCAGCAAGCTGAGTGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAGGCTCACGGACCAGCAGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TCAATGACAGCTAGGTGGGCTCCCATGAGAATGGGCTaGTGCCTCAGGTCGGCCTCGCGCACCGGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: SMTARWAPMRMG*CLRSASRTGRS
Trigger: CGAGCGCCCGGTGCGCGAGGCCGACCTGAGGCACCAGCCCATTCTCATGGGAGCCCACCTAGCTGTCATTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp ACACTGGTGCTTTGGTGGGCCTGTCGGACAGTGGTTTaGAGGTCCCCTCGGGCAGGTAGGGGGAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: TLVLWWACRTVV*RSPRAGRGRPG
Trigger: CCCTGGCCTCCCCCTACCTGCCCGAGGGGACCTCCAAACCACTGTCCGACAGGCCCACCAAAGCACCAGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CCGGGTGGGGCTATTTGGGGGTGCCGCCGCCCTTCTTaGGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: PGGAIWGCRRPS*EWWVSCPARGV
Trigger: GACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 72 bp CCCGGGTGGGGCTATTTGGGGGTGCCGCCGCCCTTCTaGGGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGT +
Preference number: 6 (lower is better)
Translates to: PGWGYLGVPPPF*GVVGFLPCQRC
Trigger: ACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCCCCACCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 90 bp GACGGGGAGGGAGCCCGAGACGTGGGCCTCTTCACCCCGAGGTTATaGTGGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: DGEGARDVGLFTPRL*WASLATVDSDRVDW
Trigger: CCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCACGTCTCGGGCTCCCTCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS CAA 90 bp CTCCTCTGCTCGCCGCTGCTGCCGCTCCAGCAGGCTGGCCCGCTTTaGGGCCATCTCGTCCTCAGGCTTGTCTTCATCCTGGGGACAGAC +
Preference number: 6 (lower is better)
Translates to: LLCSPLLPLQQAGPL*GHLVLRLVFILGTD
Trigger: GTCTGTCCCCAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGCAGCAGCGGCGAGCAGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS TCA 72 bp ATCCACGTCGCTGTCCAGGCCAAAGGGGGTGCTGAATaGCACAGCCTGGGAGAGGGGACGGCTGAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: IHVAVQAKGGAE*HSLGEGTAELP
Trigger: CGGCAGCTCAGCCGTCCCCTCTCCCAGGCTGTGTCATTCAGCACCCCCTTTGGCCTGGACAGCGACGTGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp CCGAGCTCACAGAGCGGAGGAGCACAGGGTCTCCCATaGCGACATCCACGTCGCTGTCCAGGCCAAAGGGGG +
Preference number: 6 (lower is better)
Translates to: PSSQSGGAQGLP*RHPRRCPGQRG
Trigger: CCCCCTTTGGCCTGGACAGCGACGTGGATGTCGTCATGGGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp CCCCATCTGGGAGGAGCCGGGGCTCGGCACTGTGGATaGTCTGCAGAGCTTCCTCGATGGTGGGCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: PHLGGAGARHCG*SAELPRWWAGH
Trigger: GTGACCTGCCCACCATCGAGGAAGCTCTGCAGATCATCCACAGTGCCGAGCCCCGGCTCCTCCCAGATGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp CGCCGGACGGTCGTGTCCACCCAGAAAAGCAGCTTGTaGTCCAAGCTGGTCAGGGCCAAGGGACCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: RRTVVSTQKSSL*SKLVRAKGPGR
Trigger: CCTGCCAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACGACCGTCCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp GACAGAGATTGCAGGTCAGTGCCCACCAGAAGCCCCTaGCCTCCACAACACCCGGTCCAGCAGGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: DRDCRSVPTRSP*PPQHPVQQAVG
Trigger: CCCCACAGCCTGCTGGACCGGGTGTTGTGGAGGGCAGGGGCTTCTGGTGGGCACTGACCTGCAATCTCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593434.1
CDS CCA 72 bp GGCTGCACCTGCAGGAAGGCGCTTTTGCCCAGCCGCTaGCGGTGCTTGGCGAATATGGCCTCAATCCGTCGC +
Preference number: 6 (lower is better)
Translates to: GCTCRKALLPSR*RCLANMASIRR
Trigger: GCGACGGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TTGCTGACCGCTCGATTGTATTCCCCCAGCCCCTCGTaGGGCACCGGGCCCAGGTCTGGCGAGAAGGTCACT +
Preference number: 6 (lower is better)
Translates to: LLTARLYSPSPS*GTGPRSGEKVT
Trigger: AGTGACCTTCTCGCCAGACCTGGGCCCGGTGCCCCACGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GAGAACTTGCGCAGGTGGGGGAGGCTGTCTACGTCGTaGGGTGGCGTAAGCACCCTGGTCAAGGGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: ENLRRWGRLSTS*GGVSTLVKGAS
Trigger: GCTGGCACCCTTGACCAGGGTGCTTACGCCACCCCACGACGTAGACAGCCTCCCCCACCTGCGCAAGTTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CGCAGCACCTTATCGAGGTCGTCCATCAGCTTCAGCTaGGCCCGGCGCTCGTACTCCTGCCGCGTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: RSTLSRSSISFS*ARRSYSCRVKS
Trigger: GGACTTCACGCGGCAGGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGACGACCTCGATAAGGTGCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 72 bp GCTAGTGCCGAGGCCCTGAGGCTGGAGCAAACCTACTaGGGGGCACGGAAGTACAAGGGGGCCAGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: ASAEALRLEQTY*GARKYKGASVA
Trigger: AGCCACACTGGCCCCCTTGTACTTCCGTGCCCCCCAGTAGGTTTGCTCCAGCCTCAGGGCCTCGGCACTAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS CAA 72 bp AGCCGCCGGACGGTCGTGTCCACCCAGAAAAGCAGCTaGTGCTCCAAGCTGGTCAGGGCCAAGGGACCTGGC +
Preference number: 6 (lower is better)
Translates to: SRRTVVSTQKSS*CSKLVRAKGPG
Trigger: GCCAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACGACCGTCCGGCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp GGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTaGCCCTGCCAGAGGTGTCCCTGGATGGTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GVPPPFLGVVGF*PCQRCPWMVKA
Trigger: TGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS TCA 72 bp AGTTGTACTTGTAGATGCCTTCCACCATGGCGGGCGTaGCGGTCCGGGGCCCATACCCTGCCAGCCGCGACA +
Preference number: 6 (lower is better)
Translates to: SCTCRCLPPWRA*RSGAHTLPAAT
Trigger: TGTCGCGGCTGGCAGGGTATGGGCCCCGGACCGTCACGCCCGCCATGGTGGAAGGCATCTACAAGTACAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp CAGTGGACAGTGACAGGGTGGACTGGGAATAGATTTTaGTCAGCCGAGAGCCCAGCAGGCCGCGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: QWTVTGWTGNRF*SAESPAGRGLG
Trigger: GCCCAGCCCGCGGCCTGCTGGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp CCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTTGCCCTaGCAGAGGTGTCCCTGGATGGTGAAGGCATCGACG +
Preference number: 6 (lower is better)
Translates to: PPPFLGVVGFLP*QRCPWMVKAST
Trigger: CGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 72 bp GGGTCTCGGGGTGTGGCATGTACACTGGTGCTTTGGTaGGCCTGTCGGACAGTGGTTTGGAGGTCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: GSRGVACTLVLW*ACRTVVWRSPR
Trigger: CCGAGGGGACCTCCAAACCACTGTCCGACAGGCCCACCAAAGCACCAGTGTACATGCCACACCCCGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GCCCGAGACGTGGGCCTCTTCACCCCGAGGTTATTGTaGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTG +
Preference number: 6 (lower is better)
Translates to: ARDVGLFTPRLL*ASLATVDSDRV
Trigger: CACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCACGTCTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS CCA 72 bp GCTATTTGGGGGTGCCGCCGCCCTTCTTGGGAGTGGTaGGTTTCTTGCCCTGCCAGAGGTGTCCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: AIWGCRRPSWEW*VSCPARGVPGW
Trigger: CCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 72 bp GAGGGGGTCTCGGGGTGTGGCATGTACACTGGTGCTTaGGTGGGCCTGTCGGACAGTGGTTTGGAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: EGVSGCGMYTGA*VGLSDSGLEVP
Trigger: GGGGACCTCCAAACCACTGTCCGACAGGCCCACCAAAGCACCAGTGTACATGCCACACCCCGAGACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp ATGTCCCGCTGCAGCGAGCTCAAGGCGGCACTCAGCTaGCTGACCGCTCGATTGTATTCCCCCAGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: MSRCSELKAALS*LTARLYSPSPS
Trigger: CGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAAGCTGAGTGCCGCCTTGAGCTCGCTGCAGCGGGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp GGAGCCCGAGACGTGGGCCTCTTCACCCCGAGGTTATaGTGGGCCTCGTTGGCCACAGTGGACAGTGACAGG +
Preference number: 6 (lower is better)
Translates to: GARDVGLFTPRL*WASLATVDSDR
Trigger: CCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCACGTCTCGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS CAA 72 bp AGGCTGGCCCGCTTTTGGGCCATCTCGTCCTCAGGCTaGTCTTCATCCTGGGGACAGACGCCGAGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RLARFWAISSSG*SSSWGQTPSPA
Trigger: GGCTGGACTCGGCGTCTGTCCCCAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS CAA 90 bp GGCTATTTGGGGGTGCCGCCGCCCTTCTTGGGAGTGGTGGGTTTCTaGCCCTGCCAGAGGTGTCCCTGGATGGTGAAGGCATCGACGCTC +
Preference number: 6 (lower is better)
Translates to: GYLGVPPPFLGVVGF*PCQRCPWMVKASTL
Trigger: GAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 90 bp TTCTCCTGCAGCCGCCGGACGGTCGTGTCCACCCAGAAAAGCAGCTaGTGCTCCAAGCTGGTCAGGGCCAAGGGACCTGGCAGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: FSCSRRTVVSTQKSS*CSKLVRAKGPGRVF
Trigger: AAAGACCCTGCCAGGTCCCTTGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACGACCGTCCGGCGGCTGCAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp CCTTGGCCCGCGAGAAATCGTACTGGTCCAGCGACTTaGTCTCGGGCACTAGAAAGGTCCTCCGCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: PWPARNRTGPAT*SRALERSSAAA
Trigger: GGCCGCTGCGGAGGACCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp AGTGGACGTGGGGGACCCCGCTCCGGCCTCAGCCTCTaGCTTCACCAGCTGTTTCTTGCGTTCTGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: SGRGGPRSGLSL*LHQLFLAFCKA
Trigger: AGCTTTGCAGAACGCAAGAAACAGCTGGTGAAGGCAGAGGCTGAGGCCGGAGCGGGGTCCCCCACGTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS GCA 72 bp TGTACTCGGGCACTGACGCTGGGGAGGAGGCATTGCTaGCATTTTCCCAGTCCCGTTCGCGGCTTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: CTRALTLGRRHC*HFPSPVRGFQA
Trigger: TGCCTGGAAGCCGCGAACGGGACTGGGAAAATGGCAGCAATGCCTCCTCCCCAGCGTCAGTGCCCGAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 72 bp AGGCTGGCCGCCGCCTTGGCCCGCGAGAAATCGTACTaGTCCAGCGACTTGATCTCGGGCACTAGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: RLAAALAREKSY*SSDLISGTRKV
Trigger: GACCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GGTTCCAGGCCTTGCCCAGGGCCTCCATATGGGACATaGACGGGGAAGACTTCAGGGAGCCTGTGGATCCTC +
Preference number: 6 (lower is better)
Translates to: GSRPCPGPPYGT*TGKTSGSLWIL
Trigger: GAGGATCCACAGGCTCCCTGAAGTCTTCCCCGTCCATGTCCCATATGGAGGCCCTGGGCAAGGCCTGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CGCTTTTGCCCAGCCGCTGGCGGTGCTTGGCGAATATaGCCTCAATCCGTCGCTTCTGAGCCTCGATGGCTC +
Preference number: 6 (lower is better)
Translates to: RFCPAAGGAWRI*PQSVASEPRWL
Trigger: GAGCCATCGAGGCTCAGAAGCGACGGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GCAGGAAGGCGCTTTTGCCCAGCCGCTGGCGGTGCTTaGCGAATATGGCCTCAATCCGTCGCTTCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: AGRRFCPAAGGA*RIWPQSVASEP
Trigger: AGGCTCAGAAGCGACGGATTGAGGCCATATTCGCCAAGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TTTTGGGCCATCTCGTCCTCAGGCTTGTCTTCATCCTaGGGACAGACGCCGAGTCCAGCCAGCCACCCCCTC +
Preference number: 6 (lower is better)
Translates to: FWAISSSGLSSS*GQTPSPASHPL
Trigger: GAGGGGGTGGCTGGCTGGACTCGGCGTCTGTCCCCAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS CAA 72 bp GCCTTGGCCCGCGAGAAATCGTACTGGTCCAGCGACTaGATCTCGGGCACTAGAAAGGTCCTCCGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: ALAREKSYWSSD*ISGTRKVLRSG
Trigger: GCCGCTGCGGAGGACCTTTCTAGTGCCCGAGATCAAGTCGCTGGACCAGTACGATTTCTCGCGGGCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp CTCCTCTGCTCGCCGCTGCTGCCGCTCCAGCAGGCTGGCCCGCTTTaGGGCCATCTCGTCCTCAGGCTTGTCTTCATCCTTGTAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LLCSPLLPLQQAGPL*GHLVLRLVFILVEE
Trigger: TTCTTCTACAAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGCTGGAGCGGCAGCAGCGGCGAGCAGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp CAGACAGGGAGATGGTTTCGAGGGGGTCTCGGGGTGTaGCATGTACACTGGTGCTTTGGTGGGCCTGTCGGA +
Preference number: 6 (lower is better)
Translates to: QTGRWFRGGLGV*HVHWCFGGPVG
Trigger: TCCGACAGGCCCACCAAAGCACCAGTGTACATGCCACACCCCGAGACCCCCTCGAAACCATCTCCCTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TGCGTTCTGCAAAGCTGGTCATTTTCACCTCGGAGTTaGTGGCTGCTGGGGACGAAGCCACCGCCTTCGGGG +
Preference number: 6 (lower is better)
Translates to: CVLQSWSFSPRS*WLLGTKPPPSG
Trigger: CCCCGAAGGCGGTGGCTTCGTCCCCAGCAGCCACCAACTCCGAGGTGAAAATGACCAGCTTTGCAGAACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 72 bp TGGATGGTGAAGGCATCGACGCTCATGGACATGGTCTaGGCGGGGATCTGGGTGAAGCGCTTGCGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: WMVKASTLMDMV*AGIWVKRLRSE
Trigger: CTCGGACCGCAAGCGCTTCACCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCGATGCCTTCACCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 90 bp CCACGAGGAAGGCGAGAGGCACAGAAATCCTGCACGAGCTGGAGGTaGTACAGGCTGTCCGCCACAGACATGGGGTCCTTCAAGCACACC +
Preference number: 6 (lower is better)
Translates to: PRGRREAQKSCTSWR*YRLSATDMGSFKHT
Trigger: GGTGTGCTTGAAGGACCCCATGTCTGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCAGGATTTCTGTGCCTCTCGCCTTCCTCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp TGGGTTTCTTGCCCTGCCAGAGGTGTCCCTGGATGGTaGAGGCATCGACGCTCATGGACATGGTCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: WVSCPARGVPGW*RHRRSWTWSWR
Trigger: CCGCCAAGACCATGTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp TTTCGAGGGGGTCTCGGGGTGTGGCATGTACACTGGTaGTTTGGTGGGCCTGTCGGACAGTGGTTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: FRGGLGVWHVHW*FGGPVGQWFGG
Trigger: ACCTCCAAACCACTGTCCGACAGGCCCACCAAAGCACCAGTGTACATGCCACACCCCGAGACCCCCTCGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TGGTTTCGAGGGGGTCTCGGGGTGTGGCATGTACACTaGTGCTTTGGTGGGCCTGTCGGACAGTGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: WFRGGLGVWHVH*CFGGPVGQWFG
Trigger: TCCAAACCACTGTCCGACAGGCCCACCAAAGCACCAGTGTACATGCCACACCCCGAGACCCCCTCGAAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp GGAGTGGTGGGTTTCTTGCCCTGCCAGAGGTGTCCCTaGATGGTGAAGGCATCGACGCTCATGGACATGGTC +
Preference number: 6 (lower is better)
Translates to: GVVGFLPCQRCP*MVKASTLMDMV
Trigger: GACCATGTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 72 bp TTGCGTTCTGCAAAGCTGGTCATTTTCACCTCGGAGTaGGTGGCTGCTGGGGACGAAGCCACCGCCTTCGGG +
Preference number: 6 (lower is better)
Translates to: LRSAKLVIFTSE*VAAGDEATAFG
Trigger: CCCGAAGGCGGTGGCTTCGTCCCCAGCAGCCACCAACTCCGAGGTGAAAATGACCAGCTTTGCAGAACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CAA 90 bp AGGTGTCCCTGGATGGTGAAGGCATCGACGCTCATGGACATGGTCTaGGCGGGGATCTGGGTGAAGCGCTTGCGGTCCGAGTTGTACTTG +
Preference number: 6 (lower is better)
Translates to: RCPWMVKASTLMDMV*AGIWVKRLRSELYL
Trigger: CAAGTACAACTCGGACCGCAAGCGCTTCACCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS TCA 72 bp CGACGCTCATGGACATGGTCTTGGCGGGGATCTGGGTaGAGCGCTTGCGGTCCGAGTTGTACTTGTAGATGC +
Preference number: 6 (lower is better)
Translates to: RRSWTWSWRGSG*SACGPSCTCRC
Trigger: GCATCTACAAGTACAACTCGGACCGCAAGCGCTTCACCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 72 bp CGAGCTGGAGGTTGTACAGGCTGTCCGCCACAGACATaGGGTCCTTCAAGCACACCTCCTCAAGTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: RAGGCTGCPPQT*GPSSTPPQVEA
Trigger: TGCTTCGACTTGAGGAGGTGTGCTTGAAGGACCCCATGTCTGTGGCGGACAGCCTGTACAACCTCCAGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS CCA 72 bp TGTGGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTaGACTGGGAATAGATTTTGCTCAGCCGAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: CGPRWPQWTVTG*TGNRFCSAESP
Trigger: TGGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CCA 72 bp TGTGGGCCTCGTTGGCCACAGTGGACAGTGACAGGGTaGACTGGGAATAGATTTTGCTCAGCCGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: CGPRWPQWTVTG*TGNRFCSAESL
Trigger: CAGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593434.1
CDS CCA 72 bp TGGTGCCTACTGTATGCACAGCCCCACACTAAGTACTaGGACACAACAGGGATGGGATACACTGGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: WCLLYAQPHTKY*DTTGMGYTGCR
Trigger: GCGGCACCCAGTGTATCCCATCCCTGTTGTGTCCCAGTACTTAGTGTGGGGCTGTGCATACAGTAGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS CAA 72 bp GGGGGAGGCAGCGTGACCATCGGGCAAGTCCTTCACTaGCACAAAGTCGGGCTTGAGCACCTCAAAACACAT +
Preference number: 6 (lower is better)
Translates to: GGGSVTIGQVLH*HKVGLEHLKTH
Trigger: ATGTGTTTTGAGGTGCTCAAGCCCGACTTTGTGCAAGTGAAGGACTTGCCCGATGGTCACGCTGCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160298.9
ENST00000446248.4
CDS TCA 72 bp GAGGTTATTGTGGGCCTCGTTGGCCACAGTGGACAGTaGCAGGGTGGACTGGGAATAGATTTTGCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: EVIVGLVGHSGQ*QGGLGIDFAQP
Trigger: CGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS GCA 72 bp CAGTGGACAGTGACAGGGTGGACTGGGAATAGATTTTaGTCAGCCGAGAGCCTGGGGACAGAGATTGCAGGT +
Preference number: 6 (lower is better)
Translates to: QWTVTGWTGNRF*SAESLGTEIAG
Trigger: ACCTGCAATCTCTGTCCCCAGGCTCTCGGCTGAGCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593434.1
CDS GCA 72 bp GGGATGGGATACACTGGGTGCCGCTCACACACACACTaGTTAACCCAACGGGGAAGACAAAAGCAGCAGACA +
Preference number: 6 (lower is better)
Translates to: GMGYTGCRSHTH*LTQRGRQKQQT
Trigger: TGTCTGCTGCTTTTGTCTTCCCCGTTGGGTTAAGCAGTGTGTGTGTGAGCGGCACCCAGTGTATCCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595692.1
CDS CCA 72 bp TCACCCCGAGGTTATTGTGGGCCTCGTTGGCCACAGTaGACAGTGACAGGGTGGACTGGGAATAGATTTTGC +
Preference number: 6 (lower is better)
Translates to: SPRGYCGPRWPQ*TVTGWTGNRFC
Trigger: GCAAAATCTATTCCCAGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000593434.1
ENST00000595692.1
CDS CAA 90 bp GCCCGGAACTGGCAGCTCGAGTCGCGAAAGAGGATCAGGAAGTGGTaGGCCTTGCTTTTCTCAATTTCCTCCAGAATGCGATTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ARNWQLESRKRIRKW*ALLFSISSRMRFFC
Trigger: GCAGAAGAATCGCATTCTGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCTCTTTCGCGACTCGAGCTGCCAGTTCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS CAA 72 bp CTCGAGTCGCGAAAGAGGATCAGGAAGTGGTTGGCCTaGCTTTTCTCAATTTCCTCCAGAATGCGATTCTTC +
Preference number: 6 (lower is better)
Translates to: LESRKRIRKWLA*LFSISSRMRFF
Trigger: GAAGAATCGCATTCTGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCTCTTTCGCGACTCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160298.9
ENST00000446248.4
ENST00000595692.1
CDS GCA 72 bp TTTGTTTTCATCATTGTTCTAAATGCACTTAGTTGGTaGCTACTGTATGCACAGCCCCACACTAAGTACTGG +
Preference number: 6 (lower is better)
Translates to: FVFIIVLNALSW*LLYAQPHTKYW
Trigger: CCAGTACTTAGTGTGGGGCTGTGCATACAGTAGGCACCAACTAAGTGCATTTAGAACAATGATGAAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595692.1