RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMSAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000118200

Ensembl transcript IDs: ENST00000236925.8, ENST00000358823.6, ENST00000413307.6, ENST00000447701.2, ENST00000475326.1, ENST00000532732.1

Found 508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTTCTTATGCTCCATTTCTGCTTCCAACTGTTGTTTCCGGAGCTaGGTTTCCTTTTCCCTTCTTAATCTTTTCTCCAACAAAGCTGCC +
Preference number: 1 (lower is better)
Translates to: SFLCSISASNCCFRS*VSFSLLNLFSNKAA
Trigger: GGCAGCTTTGTTGGAGAAAAGATTAAGAAGGGAAAAGGAAACTCAGCTCCGGAAACAACAGTTGGAAGCAGAAATGGAGCATAAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR TCA 90 bp CCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTTGTTGTTTCCGGAGCTaGGTTTCCTTTTCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: PPHIFLPNKFSACSLIFFCCFRS*VSFSLL
Trigger: AAGAAGGGAAAAGGAAACTCAGCTCCGGAAACAACA...AAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTACGCATCTCATTTATaGTACAATACTGTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMYASHL*YNTVFP
Trigger: GGGGAAGACAGTATTGTATCATAAATGAGATGCGTA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR GCA 90 bp TTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTTCTCCAACAAAGCTaGCCGTTTCATTGCCATATC +
Preference number: 2 (lower is better)
Translates to: FRLIYSCLINSLRALSSSFLQQS*PFHCHI
Trigger: GATATGGCAATGAAACGGGCAGCTTTGTTGGAGAAA...AGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCAGAATTTGACAGGCTaGACTGGTAACCACGACAAA +
Preference number: 2 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSQNLTG*TGNHDK
Trigger: TTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCACTCCAAAATACTGTaGTTTACATTCCAGTTGTTC +
Preference number: 2 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVHSKIL*FTFQLF
Trigger: GAACAACTGGAATGTAAACCACAGTATTTTGGAGTG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTGGTTAAGCTCATGTaGTTTAAAGCGAACCTACTA +
Preference number: 2 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVLVKLM*FKANLL
Trigger: TAGTAGGTTCGCTTTAAACCACATGAGCTTAACCAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR GCA 90 bp CTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTCTTCAGCTGCCCGTTTCATTaGCATATCATTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LIYSCLINSLRALSSSFFSCPFH*HIIFCF
Trigger: AAAGCAGAAAATGATATGGCAATGAAACGGGCAGCT...GAAGAAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCTTACATCTTCAGATTaGAAGACTACTCTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSLTSSD*KTTLKV
Trigger: CACTTTGAGAGTAGTCTTTCAATCTGAAGATGTAAG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCATTTGTCACAACACTaGAATATAACAGGGTCACAT +
Preference number: 2 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSHLSQH*NITGSH
Trigger: ATGTGACCCTGTTATATTTCAGTGTTGTGACAAATG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTTGGTTAAGCTCATGTaGTTTAAAGCGAACCTACTA +
Preference number: 2 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEILVKLM*FKANLL
Trigger: TAGTAGGTTCGCTTTAAACCACATGAGCTTAACCAA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CAA 90 bp CAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCCCTCAGTTTTACGCCTaGTTTCCTCCTTCTTATGCT +
Preference number: 3 (lower is better)
Translates to: QLFPPHIFLPNKFSACSLPQFYA*FPPSYA
Trigger: AGCATAAGAAGGAGGAAACAAGGCGTAAAACTGAGG...GAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR CAA 90 bp CTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTCTTCTTCTGCTTCCAACTGTaGTTTCCGGAGCTGAGTTTC +
Preference number: 3 (lower is better)
Translates to: LIYSCLINSLRALSSSFFFCFQL*FPELSF
Trigger: GAAACTCAGCTCCGGAAACAACAGTTGGAAGCAGAA...GAAGAAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTGGTTTACATTCCAGTaGTTCATGACAACAGAGCTT +
Preference number: 3 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVWFTFQ*FMTTEL
Trigger: AAGCTCTGTTGTCATGAACAACTGGAATGTAAACCA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CAA 90 bp AGTTTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTAAGCTGCCCGTTTCATaGCCATATCATTTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: SFSCFRLIYSCLINSLRAKLPVS*PYHFLL
Trigger: AAGCAGAAAATGATATGGCAATGAAACGGGCAGCTT...AGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAGACTTCTTGAGAACTaGTTTCAGGAAGTCTTACAT +
Preference number: 3 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVRLLEN*FQEVLH
Trigger: ATGTAAGACTTCCTGAAACAAGTTCTCAAGAAGTCT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR GCA 72 bp TCCATTAGTTTCAGTTGTTTCCGCCTCATATATTCTTaGCTAATAAATTCTCTGCGTGCTCTCTCATCTTCT +
Preference number: 3 (lower is better)
Translates to: SISFSCFRLIYS*LINSLRALSSS
Trigger: AGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACTAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
3UTR CCA 72 bp GCAACTTCTCATAACATATTCTTGGTTAAGCTCATGTaGTTTAAAGCGAACCTACTAGCAGCTCTTTACAAC +
Preference number: 3 (lower is better)
Translates to: ATSHNIFLVKLM*FKANLLAALYN
Trigger: GTTGTAAAGAGCTGCTAGTAGGTTCGCTTTAAACCACATGAGCTTAACCAAGAATATGTTATGAGAAGTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTGGTTTACATTCCAGTaGTTCATGACAACAGAGCTT +
Preference number: 3 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSWFTFQ*FMTTEL
Trigger: AAGCTCTGTTGTCATGAACAACTGGAATGTAAACCA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTGTGTTTCAGTAAGGTaGACGAAAATCCTCAGACTT +
Preference number: 3 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSCVSVR*TKILRL
Trigger: AAGTCTGAGGATTTTCGTCAACCTTACTGAAACACA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR CCA 72 bp TTTCCTGAGAATGAAGTTTTTCCCCAACTAACCCTCTaGTATACACTGTTAAAGAACAAAGATCATGTAGAG +
Preference number: 3 (lower is better)
Translates to: FPENEVFPQLTL*YTLLKNKDHVE
Trigger: CTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTGGGGAAAAACTTCATTCTCAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCTAAATTATTCTGAGTaGGCCAGAAGTGGTGTAAAA +
Preference number: 3 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSLNYSE*ARSGVK
Trigger: TTTTACACCACTTCTGGCCAACTCAGAATAATTTAG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTAGACTTCTTGAGAACTaGTTTCAGGAAGTCTTACAT +
Preference number: 3 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIRLLEN*FQEVLH
Trigger: ATGTAAGACTTCCTGAAACAAGTTCTCAAGAAGTCT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
3UTR TCA 72 bp TTAAAACATCTAGCTACAGATCTTTTTACATGCTGTTaGAAGTCTAGGCCCATGAGAGTACATTCTCTTGAA +
Preference number: 3 (lower is better)
Translates to: LKHLATDLFTCC*KSRPMRVHSLE
Trigger: TTCAAGAGAATGTACTCTCATGGGCCTAGACTTTCAACAGCATGTAAAAAGATCTGTAGCTAGATGTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCGGGCATAGGAATGTaGCGGCGCCGTCTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPGIGM*RRRLRP
Trigger: CGGACGGAGACGGCGCCGCCACATTCCTATGCCCGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358823.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAACCTTCACATGGCGTaGCCTCGCCACCACGGGGGT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMNLHMA*PRHHGG
Trigger: ACCCCCGTGGTGGCGAGGCCACGCCATGTGAAGGTT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAGGACGAGGGGAGTCTaGGGAGAATGGTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMRTRGV*GEWCNG
Trigger: GCCATTGCACCATTCTCCTCAGACTCCCCTCGTCCT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGCCCTAACCTTCACATaGCGTGGCCTCGCCACCACG +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISALTFT*RGLATT
Trigger: CGTGGTGGCGAGGCCACGCCATGTGAAGGTTAGGGC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCCTGAGGCTGAAGAATaGGCCTGGGGACGTGAATAC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMPEAEE*AWGREY
Trigger: GTATTCACGTCCCCAGGCTCATTCTTCAGCCTCAGG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCATCTCCCTGGGGTCTaGAGCATCCCCCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMHLPGV*SIPHLS
Trigger: TGAAAGATGGGGGATGCTGCAGACCCCAGGGAGATG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCAGCCAGGCCAGATTaGAGGCGATTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISPARPD*RRFWPW
Trigger: CCAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTCAGAGGCCAACAGCTaGGTAGTGTCCCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVSEANS*VVSRPC
Trigger: ACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCCTGAGGCTGAAGAATaGGCCTGGGGACGTGAATAC +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVPEAEE*AWGREY
Trigger: GTATTCACGTCCCCAGGCTCATTCTTCAGCCTCAGG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGACTGTGGAGATGGGTaGGTAGGACGAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPDCGDG*VGRGES
Trigger: AGACTCCCCTCGTCCTACTCACCCATCTCCACAGTC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGCCTTCTACAGACTCTaGTCTTGGCGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVAFYRL*SWRPLA
Trigger: GGCAAGAGGACGCCAAGATCAGAGTCTGTAGAAGGC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCCAGCCAGGCCAGATTaGAGGCGATTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIPARPD*RRFWPW
Trigger: CCAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTGTCCCAAAGGCTTTaGCCACCAGCCAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLSQRL*PPARPD
Trigger: ATCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAGTGTCCCGTCCCTGTaGAAGCCCTGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVSVPSL*KPCFFW
Trigger: CCAGAAGAAACAGGGCTTCCACAGGGACGGGACACT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTCAGAGGCCAACAGCTaGGTAGTGTCCCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSEANS*VVSRPC
Trigger: ACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAGCTCCTTCCCCACTTaGAGGGAAGTCAGAACTACT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMSSFPT*REVRTT
Trigger: AGTAGTTCTGACTTCCCTTCAAGTGGGGAAGGAGCT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTGAGGCTGAAGAATaGGCCTGGGGACGTGAATAC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISPEAEE*AWGREY
Trigger: GTATTCACGTCCCCAGGCTCATTCTTCAGCCTCAGG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGACTGTGGAGATGGGTaGGTAGGACGAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNDCGDG*VGRGES
Trigger: AGACTCCCCTCGTCCTACTCACCCATCTCCACAGTC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGCCTTCTACAGACTCTaGTCTTGGCGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISAFYRL*SWRPLA
Trigger: GGCAAGAGGACGCCAAGATCAGAGTCTGTAGAAGGC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGACCCGTGTTCAGCGATaGCAAAGAAAGGCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMTRVQR*QRKARD
Trigger: GTCTCTAGCCTTTCTTTGGCATCGCTGAACACGGGT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCTGTCCCAAAGGCTTTaGCCACCAGCCAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNLSQRL*PPARPD
Trigger: ATCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTAGGTTCAGCTCCTTGTaGACGAACAACACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPHIFLPNKFSACSLIFFRFSSL*TNNTRL
Trigger: CAGCCTCGTGTTGTTCGTCCACAAGGAGCTGAACCT...AAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTCAGAGGCCAACAGCTaGGTAGTGTCCCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNSEANS*VVSRPC
Trigger: ACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAGAAGACTGTGGAGATaGGTGAGTAGGACGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVRRLWR*VSRTRG
Trigger: TCCCCTCGTCCTACTCACCCATCTCCACAGTCTTCT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp TTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCAGCTCCTTCCCCACTTaGAGGGAAGTCAGAACTACT +
Preference number: 4 (lower is better)
Translates to: LFPPHIFLPNKFSACSLISSFPT*REVRTT
Trigger: AGTAGTTCTGACTTCCCTTCAAGTGGGGAAGGAGCT...GATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTGGGCCATGTCCCTATaGAGCCATCAACATAAGACA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMWAMSL*SHQHKT
Trigger: TGTCTTATGTTGATGGCTTCATAGGGACATGGCCCA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGGGGGCACACAAGATTTaGGGTCACTGTGAGAATCTA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMGAHKI*GHCENL
Trigger: TAGATTCTCACAGTGACCTCAAATCTTGTGTGCCCC...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGCACTGCTGCCTGGCTaGGACTTGGTACTTACAGTA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPALLPG*DLVLTV
Trigger: TACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGGACGAGGGGAGTCTaGGGAGAATGGTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQRTRGV*GEWCNG
Trigger: GCCATTGCACCATTCTCCTCAGACTCCCCTCGTCCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGGGGGGTTCTGTGGGTTaGTTCAATTGGTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMGGSVG*FNWSSF
Trigger: AAATGAGGACCAATTGAATCAACCCACAGAACCCCC...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCATCTCCCTGGGGTCTaGAGCATCCCCCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIHLPGV*SIPHLS
Trigger: TGAAAGATGGGGGATGCTGCAGACCCCAGGGAGATG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTCTTTCTCATCTCCCTaGGGTCTGCAGCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSSFSSP*GLQHPP
Trigger: TGGGGGATGCTGCAGACCCCAGGGAGATGAGAAAGA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTCTTTCTCATCTCCCTaGGGTCTGCAGCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNSFSSP*GLQHPP
Trigger: TGGGGGATGCTGCAGACCCCAGGGAGATGAGAAAGA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGGTTCAGCTCCTTGTaGACGAACAACACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPRFSSL*TNNTRL
Trigger: CAGCCTCGTGTTGTTCGTCCACAAGGAGCTGAACCT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGTGTCCCGTCCCTGTaGAAGCCCTGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSSVPSL*KPCFFW
Trigger: CCAGAAGAAACAGGGCTTCCACAGGGACGGGACACT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGTGTCCCGTCCCTGTaGAAGCCCTGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNSVPSL*KPCFFW
Trigger: CCAGAAGAAACAGGGCTTCCACAGGGACGGGACACT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCCTGTTAGAAGACTGTaGAGATGGGTGAGTAGGACG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVPVRRL*RWVSRT
Trigger: CGTCCTACTCACCCATCTCCACAGTCTTCTAACAGG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTGGAAGGAGACTTTTaGCCTCCTGGAGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVLEGDF*PPGAST
Trigger: AGTTGAAGCTCCAGGAGGTCAAAAGTCTCCTTCCAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCATGAGCCTGGGGACGTaGATACCTAGAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISMSLGT*IPRRQM
Trigger: CATTTGCCTTCTAGGTATTCACGTCCCCAGGCTCAT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGTTTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTATGAGCCTGGGGACGTaGATACCTAGAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SFSCFRLIYSCLINSLRAMSLGT*IPRRQM
Trigger: CATTTGCCTTCTAGGTATTCACGTCCCCAGGCTCAT...AGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp TCCATATCTTCCATTAGTTTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATACCTGAGGCTGAAGAATaGGCCTGGGGACGTGAATAC +
Preference number: 4 (lower is better)
Translates to: SISSISFSCFRLIYSCLIPEAEE*AWGREY
Trigger: GTATTCACGTCCCCAGGCTCATTCTTCAGCCTCAGG...TATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACTAATGGAAGATATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTGGGCCATGTCCCTATaGAGCCATCAACATAAGACA +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVWAMSL*SHQHKT
Trigger: TGTCTTATGTTGATGGCTTCATAGGGACATGGCCCA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGCACTGCTGCCTGGCTaGGACTTGGTACTTACAGTA +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSALLPG*DLVLTV
Trigger: TACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAGAGGGTTGTGGAGGTaGAATCACCCAAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVRGLWR*NHPRLL
Trigger: CAACAATCTTGGGTGATTTCACCTCCACAACCCTCT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGACATACAGTCTCTGTaGCAGGCAGTGATAGGACTT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVDIQSL*QAVIGL
Trigger: AAGTCCTATCACTGCCTGTCACAGAGACTGTATGTC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCTGTTGTTTCCGGAGCTaGGTTTCCTTTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLFPPHIFLPNKFSACSLCCFRS*VSFSLL
Trigger: AAGAAGGGAAAAGGAAACTCAGCTCCGGAAACAACA...GAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGGCGTCCTCTTGCCTaGATGTACACTCTCGTTATC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPWRPLA*MYTLVI
Trigger: GATAACGAGAGTGTACATTCAGGCAAGAGGACGCCA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGCCTTCTACAGACTCTaGTCTTGGCGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQAFYRL*SWRPLA
Trigger: GGCAAGAGGACGCCAAGATCAGAGTCTGTAGAAGGC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACATCTCCCTGGGGTCTaGAGCATCCCCCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQHLPGV*SIPHLS
Trigger: TGAAAGATGGGGGATGCTGCAGACCCCAGGGAGATG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTCTTCTGGAATTTGTaGCCAAGCAACCACATGAGG +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMFFWNL*PSNHMR
Trigger: CCTCATGTGGTTGCTTGGGCACAAATTCCAGAAGAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCACCCGTGTTCAGCGATaGCAAAGAAAGGCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPTRVQR*QRKARD
Trigger: GTCTCTAGCCTTTCTTTGGCATCGCTGAACACGGGT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATCTTTCTCATCTCCCTaGGGTCTGCAGCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQSFSSP*GLQHPP
Trigger: TGGGGGATGCTGCAGACCCCAGGGAGATGAGAAAGA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAGACTTTTGACCTCCTaGAGCTTCAACTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMRLLTS*SFNCVM
Trigger: CATCACACAGTTGAAGCTCCAGGAGGTCAAAAGTCT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGGTTCAGCTCCTTGTaGACGAACAACACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNRFSSL*TNNTRL
Trigger: CAGCCTCGTGTTGTTCGTCCACAAGGAGCTGAACCT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGAAGCACTGCTGCCTaGCTGAGACTTGGTACTTAC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISRSTAA*LRLGTY
Trigger: GTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGAAGCACTGCTGCCTaGCTGAGACTTGGTACTTAC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPRSTAA*LRLGTY
Trigger: GTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAAGCCCTGTTTCTTCTaGAATTTGTGCCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMKPCFF*NLCPSN
Trigger: GTTGCTTGGGCACAAATTCCAGAAGAAACAGGGCTT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGGAGAATGGTGCAATaGCTGATGACAGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNRRMVQ*LMTGLP
Trigger: AGGCAGGCCTGTCATCAGCCATTGCACCATTCTCCT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCTGTTAGAAGACTGTaGAGATGGGTGAGTAGGACG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPVRRL*RWVSRT
Trigger: CGTCCTACTCACCCATCTCCACAGTCTTCTAACAGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAGAAAGGCTAGAGACTaGAGGACCCTTTATTGGTGT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMRKARD*RTLYWC
Trigger: ACACCAATAAAGGGTCCTCCAGTCTCTAGCCTTTCT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGTATAAGCCATCATaGGGGTATCGATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISQYKPS*GYRSWP
Trigger: TGGCCATGATCGATACCCTCATGATGGCTTATACTG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCAGTATAAGCCATCATaGGGGTATCGATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPQYKPS*GYRSWP
Trigger: TGGCCATGATCGATACCCTCATGATGGCTTATACTG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGGGCCATGTCCCTATaGAGCCATCAACATAAGACA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPWAMSL*SHQHKT
Trigger: TGTCTTATGTTGATGGCTTCATAGGGACATGGCCCA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTTGGTGTCTCGATCTaGTTGCCAAACTCGTCAAGA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLGVSI*LPNSSR
Trigger: TCTTGACGAGTTTGGCAATCAGATCGAGACACCAAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTCTTCTGAAGGAACGTaGATTCCAGTGTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMSSEGT*IPVSTS
Trigger: TGAAGTAGACACTGGAATTCACGTTCCTTCAGAAGA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTTTATATCTGCCAGTaGCTTGCTCCTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMFYICQ*LAPLSI
Trigger: GATGGACAAAGGAGCAAGTCACTGGCAGATATAAAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCATCTCCTGCTGAAGTaGCAAGCGTTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPHLLLK*QALHFL
Trigger: CAAGAAATGCAACGCTTGTCACTTCAGCAGGAGATG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGACATACAGTCTCTGTaGCAGGCAGTGATAGGACTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPDIQSL*QAVIGL
Trigger: AAGTCCTATCACTGCCTGTCACAGAGACTGTATGTC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGGGGGTTCTGTGGGTTaGTTCAATTGGTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPGGSVG*FNWSSF
Trigger: AAATGAGGACCAATTGAATCAACCCACAGAACCCCC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTGGCGTCCTCTTGCCTaGATGTACACTCTCGTTATC +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSWRPLA*MYTLVI
Trigger: GATAACGAGAGTGTACATTCAGGCAAGAGGACGCCA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGAAGTTGTTGGCATCTaGTTTCTCCATTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVEVVGI*FLHFLQ
Trigger: CTGGAGGAAATGGAGAAATCAGATGCCAACAACTTC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAAGTGTATAAAGATCTaGACTGGCATCCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMKCIKI*TGILNP
Trigger: GGGATTCAGGATGCCAGTTCAGATCTTTATACACTT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTCTTCTGGAATTTGTaGCCAAGCAACCACATGAGG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVFFWNL*PSNHMR
Trigger: CCTCATGTGGTTGCTTGGGCACAAATTCCAGAAGAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTTGCCAGGTTCCACTaGTTCTCAGGATCAATAGGT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLARFH*FSGSIG
Trigger: ACCTATTGATCCTGAGAAGCAGTGGAACCTGGCAAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTTCTCCAACAAAGCTaGCCGTTTCATTGCCATATC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMFLQQS*PFHCHI
Trigger: GATATGGCAATGAAACGGGCAGCTTTGTTGGAGAAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCATCTTGGCGTCCTCTTaGCTGAATGTACACTCTCGT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISILASS*LNVHSR
Trigger: ACGAGAGTGTACATTCAGGCAAGAGGACGCCAAGAT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAGGCGATTTTGGCCCTaGAGAAATCATAGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVRRFWP*RNHSGQ
Trigger: TTGACCACTATGATTTCTCCAGGGCCAAAATCGCCT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGATTGCAGGCGATTTTaGCCCTGGAGAAATCATAGT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVDCRRF*PWRNHS
Trigger: ACTATGATTTCTCCAGGGCCAAAATCGCCTGCAATC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTCTGTGCTAAAGCCTaGATTACAGCATCATGGCCC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFCAKA*ITASWP
Trigger: GGGCCATGATGCTGTAATCCAGGCTTTAGCACAGAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGACTCAAAGCTTCCCTaGTGTTGCCAGTTCGAATAT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVDSKLP*CCQFEY
Trigger: ATATTCGAACTGGCAACACCAGGGAAGCTTTGAGTC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGGAGAATGGTGCAATaGCTGATGACAGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQRRMVQ*LMTGLP
Trigger: AGGCAGGCCTGTCATCAGCCATTGCACCATTCTCCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGAAGACTGTGGAGATaGGTGAGTAGGACGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQRRLWR*VSRTRG
Trigger: TCCCCTCGTCCTACTCACCCATCTCCACAGTCTTCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCCTGTTAGAAGACTGTaGAGATGGGTGAGTAGGACG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNPVRRL*RWVSRT
Trigger: CGTCCTACTCACCCATCTCCACAGTCTTCTAACAGG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCCCCAACTAACCCTCTaGTATACACTGTTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMPQLTL*YTLLKN
Trigger: GTTCTTTAACAGTGTATACCAGAGGGTTAGTTGGGG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGCCTTTTGACCTCCTaGAGCTTCAACTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISSLLTS*SFNCVM
Trigger: CATCACACAGTTGAAGCTCCAGGAGGTCAAAAGGCT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGCATATCTTCCAGAGTaGAATGGCAACACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISAYLPE*NGNTGS
Trigger: TGAACCAGTGTTGCCATTTCACTCTGGAAGATATGC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGCATATCTTCCAGAGTaGAATGGCAACACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPAYLPE*NGNTGS
Trigger: TGAACCAGTGTTGCCATTTCACTCTGGAAGATATGC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGCTCCTTCCCCACTTaGAGGGAAGTCAGAACTACT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQSSFPT*REVRTT
Trigger: AGTAGTTCTGACTTCCCTTCAAGTGGGGAAGGAGCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAATGAGCCTGGGGACGTaGATACCTAGAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQMSLGT*IPRRQM
Trigger: CATTTGCCTTCTAGGTATTCACGTCCCCAGGCTCAT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGGGGCACACAAGATTTaGGGTCACTGTGAGAATCTA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNGAHKI*GHCENL
Trigger: TAGATTCTCACAGTGACCTCAAATCTTGTGTGCCCC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGCCCAAGCAACCACATaGGGAATATTAAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISAQATT*GILSSE
Trigger: CTCTGAACTTAATATTCCTCATGTGGTTGCTTGGGC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTTAGCCATTTGGCTTaGGGATTCTCCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFSHLA*GFSMLS
Trigger: AGAGAGCATGGAGAATCCTCAAGCCAAATGGCTAAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTAGAGGGTTGTGGAGGTaGAATCACCCAAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIRGLWR*NHPRLL
Trigger: CAACAATCTTGGGTGATTTCACCTCCACAACCCTCT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTGGATTCCTTTAACTaGGGTTCTCCATCATCCCCA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISLDSFN*GSPSSP
Trigger: TGGGGATGATGGAGAACCTCAGTTAAAGGAATCCAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGACATACAGTCTCTGTaGCAGGCAGTGATAGGACTT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNDIQSL*QAVIGL
Trigger: AAGTCCTATCACTGCCTGTCACAGAGACTGTATGTC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGGGGGTTCTGTGGGTTaGTTCAATTGGTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNGGSVG*FNWSSF
Trigger: AAATGAGGACCAATTGAATCAACCCACAGAACCCCC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTGTTGTTTCCGGAGCTaGGTTTCCTTTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISCCFRS*VSFSLL
Trigger: AAGAAGGGAAAAGGAAACTCAGCTCCGGAAACAACA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATGGCGTCCTCTTGCCTaGATGTACACTCTCGTTATC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQWRPLA*MYTLVI
Trigger: GATAACGAGAGTGTACATTCAGGCAAGAGGACGCCA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGAAGTTGTTGGCATCTaGTTTCTCCATTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPEVVGI*FLHFLQ
Trigger: CTGGAGGAAATGGAGAAATCAGATGCCAACAACTTC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTCAAATAGCAGAATTTaGCAGGCTGCACTGGTAACC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSNSRI*QAALVT
Trigger: GGTTACCAGTGCAGCCTGTCAAATTCTGCTATTTGA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTCTTCTGGAATTTGTaGCCAAGCAACCACATGAGG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFFWNL*PSNHMR
Trigger: CCTCATGTGGTTGCTTGGGCACAAATTCCAGAAGAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCTTGCCAGGTTCCACTaGTTCTCAGGATCAATAGGT +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEILARFH*FSGSIG
Trigger: ACCTATTGATCCTGAGAAGCAGTGGAACCTGGCAAG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp TTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTTCTCCAACAAAGCTaGCCGTTTCATTGCCATATC +
Preference number: 4 (lower is better)
Translates to: LFPPHIFLPNKFSACSLIFLQQS*PFHCHI
Trigger: GATATGGCAATGAAACGGGCAGCTTTGTTGGAGAAA...GATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGGCGATTTTGGCCCTaGAGAAATCATAGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPRRFWP*RNHSGQ
Trigger: TTGACCACTATGATTTCTCCAGGGCCAAAATCGCCT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGGCGATTTTGGCCCTaGAGAAATCATAGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISRRFWP*RNHSGQ
Trigger: TTGACCACTATGATTTCTCCAGGGCCAAAATCGCCT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTCTTGAAGTTCCTCTaGCACATTTTCTGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMFLKFL*HIFCPK
Trigger: TTTGGGACAGAAAATGTGCCAGAGGAACTTCAAGAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCTGATCTGTGTAAAATaGTTCTTGAAGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMLICVK*FLKFLW
Trigger: CCAGAGGAACTTCAAGAACCATTTTACACAGATCAG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTTCTGTGCTAAAGCCTaGATTACAGCATCATGGCCC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIFCAKA*ITASWP
Trigger: GGGCCATGATGCTGTAATCCAGGCTTTAGCACAGAA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGTGCACTCATCTGTATaGGTTTCTTGTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISVHSSV*VSCGDL
Trigger: GAGATCTCCACAAGAAACCCATACAGATGAGTGCAC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTCCTCGGTTTGGAGTaGATCTCTGTACACTATCTT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVFLGLE*ISVHYL
Trigger: AAGATAGTGTACAGAGATCCACTCCAAACCGAGGAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGTGATTCCTCGGTTTaGAGTGGATCTCTGTACACT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSDSSV*SGSLYT
Trigger: AGTGTACAGAGATCCACTCCAAACCGAGGAATCACT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTGCTTCTTCAATGCTTaGTGTCTCGATCTGATTGCC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISCFFNA*CLDLIA
Trigger: GGCAATCAGATCGAGACACCAAGCATTGAAGAAGCA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGCTTCTTCAATGCTTaGTGTCTCGATCTGATTGCC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPCFFNA*CLDLIA
Trigger: GGCAATCAGATCGAGACACCAAGCATTGAAGAAGCA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCATTAGCAATTTGGTCTaGCTGAGGTGTATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVISNLV*LRCMRR
Trigger: TCTCCTCATACACCTCAGCCAGACCAAATTGCTAAT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGACTCAAAGCTTCCCTaGTGTTGCCAGTTCGAATAT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPDSKLP*CCQFEY
Trigger: ATATTCGAACTGGCAACACCAGGGAAGCTTTGAGTC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGACTCAAAGCTTCCCTaGTGTTGCCAGTTCGAATAT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISDSKLP*CCQFEY
Trigger: ATATTCGAACTGGCAACACCAGGGAAGCTTTGAGTC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTGCCTGGCTGAGACTTaGTACTTACAGTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNCLAET*YLQYLD
Trigger: GTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTGCCTGGCTGAGACTTaGTACTTACAGTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEICLAET*YLQYLD
Trigger: GTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGAGACTTTAGCCATTTaGCTTGAGGATTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPETLAI*LEDSPC
Trigger: GCATGGAGAATCCTCAAGCCAAATGGCTAAAGTCTC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGGATTTCCTTTTCTTCTaGATTATGTCCACGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMDFLFF*IMSTLF
Trigger: GAACAGCGTGGACATAATCCAGAAGAAAAGGAAATC...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGGTGTTACTGGTCTTTTaGTCTGCCATAAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMVLLVF*SAINGY
Trigger: ATAGCCATTTATGGCAGACCAAAAGACCAGTAACAC...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGCAATGCTCTAGAGTaGACAGGTAAGCACACCATA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSNALE*TGKHTI
Trigger: TATGGTGTGCTTACCTGTCCACTCTAGAGCATTGCT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCATTTTTCCTGGTCAGTaGCATAAAGACCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVIFPGQ*HKDLSV
Trigger: CACAGAAAGGTCTTTATGTCACTGACCAGGAAAAAT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGCATATCTTCCAGAGTaGAATGGCAACACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNAYLPE*NGNTGS
Trigger: TGAACCAGTGTTGCCATTTCACTCTGGAAGATATGC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp TTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCAGAACAGTTCCGCCATaGACACCAAATAATTACTCT +
Preference number: 4 (lower is better)
Translates to: FSCFRLIYSCLINSLRALRTVPP*TPNNYS
Trigger: AGAGTAATTATTTGGTGTTCATGGCGGAACTGTTCT...GAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAACATAAGACATAGATaGAGACCTTCTAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMNIRHR*RPSNSS
Trigger: GGAGGAATTAGAAGGTCTTCATCTATGTCTTATGTT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGGGGCACACAAGATTTaGGGTCACTGTGAGAATCTA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQGAHKI*GHCENL
Trigger: TAGATTCTCACAGTGACCTCAAATCTTGTGTGCCCC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTGGTGTCTCGATCTaGTTGCCAAACTCGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQLGVSI*LPNSSR
Trigger: TCTTGACGAGTTTGGCAATCAGATCGAGACACCAAG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTCTTCTGAAGGAACGTaGATTCCAGTGTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISSSEGT*IPVSTS
Trigger: TGAAGTAGACACTGGAATTCACGTTCCTTCAGAAGA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGCCCAAGCAACCACATaGGGAATATTAAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSAQATT*GILSSE
Trigger: CTCTGAACTTAATATTCCTCATGTGGTTGCTTGGGC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGCCCAAGCAACCACATaGGGAATATTAAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNAQATT*GILSSE
Trigger: CTCTGAACTTAATATTCCTCATGTGGTTGCTTGGGC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTTTATATCTGCCAGTaGCTTGCTCCTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISFYICQ*LAPLSI
Trigger: GATGGACAAAGGAGCAAGTCACTGGCAGATATAAAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACATCTCCTGCTGAAGTaGCAAGCGTTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQHLLLK*QALHFL
Trigger: CAAGAAATGCAACGCTTGTCACTTCAGCAGGAGATG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGAGGGTTGTGGAGGTaGAATCACCCAAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQRGLWR*NHPRLL
Trigger: CAACAATCTTGGGTGATTTCACCTCCACAACCCTCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTTGGATTCCTTTAACTaGGGTTCTCCATCATCCCCA +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSLDSFN*GSPSSP
Trigger: TGGGGATGATGGAGAACCTCAGTTAAAGGAATCCAA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGGGGGTTTCAAATCTaGGAGGGAAACTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNRGFQI*EGNFNQ
Trigger: CTGATTGAAGTTTCCCTCTCAGATTTGAAACCCCCT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGGGGGTTTCAAATCTaGGAGGGAAACTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSRGFQI*EGNFNQ
Trigger: CTGATTGAAGTTTCCCTCTCAGATTTGAAACCCCCT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTGTTGTTTCCGGAGCTaGGTTTCCTTTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNCCFRS*VSFSLL
Trigger: AAGAAGGGAAAAGGAAACTCAGCTCCGGAAACAACA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTGTTGTTTCCGGAGCTaGGTTTCCTTTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSCCFRS*VSFSLL
Trigger: AAGAAGGGAAAAGGAAACTCAGCTCCGGAAACAACA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGAAGTTGTTGGCATCTaGTTTCTCCATTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNEVVGI*FLHFLQ
Trigger: CTGGAGGAAATGGAGAAATCAGATGCCAACAACTTC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGTGTATAAAGATCTaGACTGGCATCCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPKCIKI*TGILNP
Trigger: GGGATTCAGGATGCCAGTTCAGATCTTTATACACTT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTGCCATAAATGGCTATaGATGGTAATTGCATCAACA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMCHKWL*MVIAST
Trigger: TGTTGATGCAATTACCATTCATAGCCATTTATGGCA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCATTTGTCACAACACTaGAATATAACAGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMHLSQH*NITGSH
Trigger: ATGTGACCCTGTTATATTTCAGTGTTGTGACAAATG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTATCTCTACTTCCCATaGAAGAAAACAAACTACGCA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMYLYFP*KKTNYA
Trigger: TGCGTAGTTTGTTTTCTTTCATGGGAAGTAGAGATA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGGAAAGTCTAGGCCCATaGGAGTACATTCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLESLGP*EYILLN
Trigger: ATTCAAGAGAATGTACTCTCATGGGCCTAGACTTTC...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR TCA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGCTTTTTACATGCTGTTaGAAGTCTAGGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLLFTCC*KSRPMR
Trigger: TCTCATGGGCCTAGACTTTCAACAGCATGTAAAAAG...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGATCATGGCCAAATGTaGACTCATCTGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISDHGQM*THLYGF
Trigger: AAACCCATACAGATGAGTGCACATTTGGCCATGATC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGATCATGGCCAAATGTaGACTCATCTGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPDHGQM*THLYGF
Trigger: AAACCCATACAGATGAGTGCACATTTGGCCATGATC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGGAATGCAAGGCAGTTaGTTAAGCAATGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPGMQGS*LSNVCS
Trigger: AGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGGAATGCAAGGCAGTTaGTTAAGCAATGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISGMQGS*LSNVCS
Trigger: AGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTCAAATGATACGCCATaGACTGATGATCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMSNDTP*TDDLFS
Trigger: AGAGAAAAGATCATCAGTGCATGGCGTATCATTTGA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGTGTCTCGATCTGATTaGCAAACTCGTCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISVSRSD*QTRQEV
Trigger: TACTTCTTGACGAGTTTGGCAATCAGATCGAGACAC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAAGCTTCCCTGGTGTTaGCAGTTCGAATATCATAAT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVKLPWC*QFEYHN
Trigger: ATTATGATATTCGAACTGGCAACACCAGGGAAGCTT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGTTTCATCCTAAGATaGACCATTTCAGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISSFILR*TISEAN
Trigger: GTTGGCCTCTGAAATGGTGCATCTTAGGATGAAACT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTGCCAGGTTCCACTaGTTCTCAGGATCAATAGGT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQLARFH*FSGSIG
Trigger: ACCTATTGATCCTGAGAAGCAGTGGAACCTGGCAAG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGATGACAGGCCTGCCTaGTTAGAAGGCTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSDDRPA*LEGLKS
Trigger: AGATTTTAAGCCTTCTAAGCAGGCAGGCCTGTCATC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGATGACAGGCCTGCCTaGTTAGAAGGCTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNDDRPA*LEGLKS
Trigger: AGATTTTAAGCCTTCTAAGCAGGCAGGCCTGTCATC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp CCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTAGCTGCCCGTTTCATTaGCATATCATTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPHIFLPNKFSACSLIFFSCPFH*HIIFCF
Trigger: AAAGCAGAAAATGATATGGCAATGAAACGGGCAGCT...AAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTTCTCCAACAAAGCTaGCCGTTTCATTGCCATATC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISFLQQS*PFHCHI
Trigger: GATATGGCAATGAAACGGGCAGCTTTGTTGGAGAAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAATCTTGGCGTCCTCTTaGCTGAATGTACACTCTCGT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQILASS*LNVHSR
Trigger: ACGAGAGTGTACATTCAGGCAAGAGGACGCCAAGAT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTTCTCCATTTCGACTaGCACAACGACTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISFLHFD*HNDLEI
Trigger: TATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTTCTCCATTTCGACTaGCACAACGACTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFLHFD*HNDLEI
Trigger: TATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCAGAATTTGACAGGCTaGACTGGTAACCACGACAAA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNQNLTG*TGNHDK
Trigger: TTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCCATACACTGTACATTaGTCAACAGTGTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVPYTVH*STVSMK
Trigger: TTTCATGGACACTGTTGAGCAATGTACAGTGTATGG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTGATTGCAGGCGATTTTaGCCCTGGAGAAATCATAGT +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIDCRRF*PWRNHS
Trigger: ACTATGATTTCTCCAGGGCCAAAATCGCCTGCAATC...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCTGATCTGTGTAAAATaGTTCTTGAAGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVLICVK*FLKFLW
Trigger: CCAGAGGAACTTCAAGAACCATTTTACACAGATCAG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTGTATGGGTTTCTTGTaGAGATCTCGTTCAGTTACC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISCMGFL*RSRSVT
Trigger: GGTAACTGAACGAGATCTCCACAAGAAACCCATACA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGTTTCCAAAACCATTTaGAAGGAGACTTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVVSKTI*KETFDL
Trigger: GAGGTCAAAAGTCTCCTTCCAAATGGTTTTGGAAAC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCGTGAAATGGCAACACTaGTTCAAGTATTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVVKWQH*FKYSWQ
Trigger: TTGCCAAGAATACTTGAACCAGTGTTGCCATTTCAC...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp TTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCGTGAAATGGCAACACTaGTTCAAGTATTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LFPPHIFLPNKFSACSLIVKWQH*FKYSWQ
Trigger: TTGCCAAGAATACTTGAACCAGTGTTGCCATTTCAC...GATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCTAAGACATTTCTTTTaGCAGCATTCAAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMLRHFF*QHSRQE
Trigger: TTCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTCCTCGGTTTGGAGTaGATCTCTGTACACTATCTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFLGLE*ISVHYL
Trigger: AAGATAGTGTACAGAGATCCACTCCAAACCGAGGAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGTGATTCCTCGGTTTaGAGTGGATCTCTGTACACT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNSDSSV*SGSLYT
Trigger: AGTGTACAGAGATCCACTCCAAACCGAGGAATCACT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTGCTTCTTCAATGCTTaGTGTCTCGATCTGATTGCC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEICFFNA*CLDLIA
Trigger: GGCAATCAGATCGAGACACCAAGCATTGAAGAAGCA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCATTAGCAATTTGGTCTaGCTGAGGTGTATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPISNLV*LRCMRR
Trigger: TCTCCTCATACACCTCAGCCAGACCAAATTGCTAAT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCATTAGCAATTTGGTCTaGCTGAGGTGTATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISISNLV*LRCMRR
Trigger: TCTCCTCATACACCTCAGCCAGACCAAATTGCTAAT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCAGTATTGTCAGTTATaGGACTCAAGGCACCTTTCG +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSQYCQL*DSRHLS
Trigger: CGAAAGGTGCCTTGAGTCCCATAACTGACAATACTG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCAGTATTGTCAGTTATaGGACTCAAGGCACCTTTCG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNQYCQL*DSRHLS
Trigger: CGAAAGGTGCCTTGAGTCCCATAACTGACAATACTG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGGTACTTACAGTACTTaGACAAGGACTCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISGTYST*TRTQSF
Trigger: GAAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATGCCTGGCTGAGACTTaGTACTTACAGTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQCLAET*YLQYLD
Trigger: GTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAGCCCTGTTTCTTCTaGAATTTGTGCCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKPCFF*NLCPSN
Trigger: GTTGCTTGGGCACAAATTCCAGAAGAAACAGGGCTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGAGACTTTAGCCATTTaGCTTGAGGATTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNETLAI*LEDSPC
Trigger: GCATGGAGAATCCTCAAGCCAAATGGCTAAAGTCTC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTGAGACTTTAGCCATTTaGCTTGAGGATTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIETLAI*LEDSPC
Trigger: GCATGGAGAATCCTCAAGCCAAATGGCTAAAGTCTC...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTGGTCCTCATTTaGTGTCAGACATACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISQLVLI*CQTYSL
Trigger: GAGACTGTATGTCTGACACCAAATGAGGACCAATTG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCCACAGCATACTTTCTaGTCATCATCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMPQHTF*SSSNCS
Trigger: AGAACAATTTGATGATGACCAGAAAGTATGCTGTGG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTGGAGGACCCTTTATTaGTGTTTTGGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISWRTLY*CFGGFN
Trigger: ATTGAATCCCCCAAAACACCAATAAAGGGTCCTCCA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGAAAGGCTAGAGACTaGAGGACCCTTTATTGGTGT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNRKARD*RTLYWC
Trigger: ACACCAATAAAGGGTCCTCCAGTCTCTAGCCTTTCT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTATAAAGATCTGAACTaGCATCCTGAATCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISYKDLN*HPESRN
Trigger: GTTCCGGGATTCAGGATGCCAGTTCAGATCTTTATA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTATAAAGATCTGAACTaGCATCCTGAATCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPYKDLN*HPESRN
Trigger: GTTCCGGGATTCAGGATGCCAGTTCAGATCTTTATA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGTTTTAGCGGGTATGTaGCTAAACTGTTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPVLAGM*LNCFLS
Trigger: TGACAGGAAACAGTTTAGCCACATACCCGCTAAAAC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGTTTTAGCGGGTATGTaGCTAAACTGTTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISVLAGM*LNCFLS
Trigger: TGACAGGAAACAGTTTAGCCACATACCCGCTAAAAC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTGGTTAAGCTCATGTaGTTTAAAGCGAACCTACTA +
Preference number: 4 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMLVKLM*FKANLL
Trigger: TAGTAGGTTCGCTTTAAACCACATGAGCTTAACCAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAGCAATGCTCTAGAGTaGACAGGTAAGCACACCATA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNSNALE*TGKHTI
Trigger: TATGGTGTGCTTACCTGTCCACTCTAGAGCATTGCT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGCCTTTTGACCTCCTaGAGCTTCAACTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQSLLTS*SFNCVM
Trigger: CATCACACAGTTGAAGCTCCAGGAGGTCAAAAGGCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCATTTTTCCTGGTCAGTaGCATAAAGACCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPIFPGQ*HKDLSV
Trigger: CACAGAAAGGTCTTTATGTCACTGACCAGGAAAAAT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGCTGAATACTGCTaGGCACACGCAATTACTTTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPKAEYC*AHAITF
Trigger: AAAAGTAATTGCGTGTGCTCAGCAGTATTCAGCTTT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp TCCATATCTTCCATTAGTTTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATAGCATATCTTCCAGAGTaGAATGGCAACACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SISSISFSCFRLIYSCLIAYLPE*NGNTGS
Trigger: TGAACCAGTGTTGCCATTTCACTCTGGAAGATATGC...TATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACTAATGGAAGATATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGAACAGTTCCGCCATaGACACCAAATAATTACTCT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISRTVPP*TPNNYS
Trigger: AGAGTAATTATTTGGTGTTCATGGCGGAACTGTTCT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAACATAAGACATAGATaGAGACCTTCTAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVNIRHR*RPSNSS
Trigger: GGAGGAATTAGAAGGTCTTCATCTATGTCTTATGTT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTCTTCTGAAGGAACGTaGATTCCAGTGTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNSSEGT*IPVSTS
Trigger: TGAAGTAGACACTGGAATTCACGTTCCTTCAGAAGA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTTTATATCTGCCAGTaGCTTGCTCCTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFYICQ*LAPLSI
Trigger: GATGGACAAAGGAGCAAGTCACTGGCAGATATAAAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTTAGCCATTTGGCTTaGGGATTCTCCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQFSHLA*GFSMLS
Trigger: AGAGAGCATGGAGAATCCTCAAGCCAAATGGCTAAA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTGGATTCCTTTAACTaGGGTTCTCCATCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQLDSFN*GSPSSP
Trigger: TGGGGATGATGGAGAACCTCAGTTAAAGGAATCCAA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGACTTCAGAGACTGTTaGCTCAAAAGGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISDFRDC*LKRFDF
Trigger: GAAATCAAACCTTTTGAGTCAACAGTCTCTGAAGTC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCAGCCAAACAGCAATaGGCTAAAGCATTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPAKQQ*AKAFCI
Trigger: AATACAAAATGCTTTAGCTCATTGCTGTTTGGCTGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGCCAGCCAAACAGCAATaGGCTAAAGCATTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLPAKQQ*AKAFCI
Trigger: AATACAAAATGCTTTAGCTCATTGCTGTTTGGCTGG...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAGTGTATAAAGATCTaGACTGGCATCCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKCIKI*TGILNP
Trigger: GGGATTCAGGATGCCAGTTCAGATCTTTATACACTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGATCATGGCCAAATGTaGACTCATCTGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNDHGQM*THLYGF
Trigger: AAACCCATACAGATGAGTGCACATTTGGCCATGATC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGGAATGCAAGGCAGTTaGTTAAGCAATGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSGMQGS*LSNVCS
Trigger: AGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTCAAATGATACGCCATaGACTGATGATCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVSNDTP*TDDLFS
Trigger: AGAGAAAAGATCATCAGTGCATGGCGTATCATTTGA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTGTGTCTCGATCTGATTaGCAAACTCGTCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIVSRSD*QTRQEV
Trigger: TACTTCTTGACGAGTTTGGCAATCAGATCGAGACAC...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGTAATGCTTCTTCAATaGTTGGTGTCTCGATCTGAT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPVMLLQ*LVSRSD
Trigger: ATCAGATCGAGACACCAAGCATTGAAGAAGCATTAC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGTTTCATCCTAAGATaGACCATTTCAGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSSFILR*TISEAN
Trigger: GTTGGCCTCTGAAATGGTGCATCTTAGGATGAAACT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCACTACAGTAAGGAATaGTGTCCTTCCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSHYSKE*CPSHFL
Trigger: CAGAAAATGGGAAGGACAGCATTCCTTACTGTAGTG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCACTACAGTAAGGAATaGTGTCCTTCCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNHYSKE*CPSHFL
Trigger: CAGAAAATGGGAAGGACAGCATTCCTTACTGTAGTG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTTGAGGATTCTCCATaGTCTCTTTTATATCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLEDSP*SLLYLP
Trigger: TGGCAGATATAAAAGAGAGCATGGAGAATCCTCAAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTGAGGATTCTCCATaGTCTCTTTTATATCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISLEDSP*SLLYLP
Trigger: TGGCAGATATAAAAGAGAGCATGGAGAATCCTCAAG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCATCACCCAAGATTGTTaGTCTCTCATCTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISITQDC*SLICIN
Trigger: GTTAATGCAGATGAGAGAGCAACAATCTTGGGTGAT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCATCACCCAAGATTGTTaGTCTCTCATCTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPITQDC*SLICIN
Trigger: GTTAATGCAGATGAGAGAGCAACAATCTTGGGTGAT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGCTGCCCGTTTCATTaGCATATCATTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSCPFH*HIIFCF
Trigger: AAAGCAGAAAATGATATGGCAATGAAACGGGCAGCT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTTTCTCCAACAAAGCTaGCCGTTTCATTGCCATATC +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSFLQQS*PFHCHI
Trigger: GATATGGCAATGAAACGGGCAGCTTTGTTGGAGAAA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp CCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTCGCCTCATATATTCTTaGCTAATAAATTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PPHIFLPNKFSACSLIFFRLIYS*LINSLR
Trigger: ACGCAGAGAATTTATTAGGCAAGAATATATGAGGCG...AAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTTCTCCATTTCGACTaGCACAACGACTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFLHFD*HNDLEI
Trigger: TATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGATTGCAGGCGATTTTaGCCCTGGAGAAATCATAGT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQDCRRF*PWRNHS
Trigger: ACTATGATTTCTCCAGGGCCAAAATCGCCTGCAATC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTGATCTGTGTAAAATaGTTCTTGAAGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLICVK*FLKFLW
Trigger: CCAGAGGAACTTCAAGAACCATTTTACACAGATCAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTGTATGGGTTTCTTGTaGAGATCTCGTTCAGTTACC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEICMGFL*RSRSVT
Trigger: GGTAACTGAACGAGATCTCCACAAGAAACCCATACA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTGTATGGGTTTCTTGTaGAGATCTCGTTCAGTTACC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNCMGFL*RSRSVT
Trigger: GGTAACTGAACGAGATCTCCACAAGAAACCCATACA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGTGCACTCATCTGTATaGGTTTCTTGTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQVHSSV*VSCGDL
Trigger: GAGATCTCCACAAGAAACCCATACAGATGAGTGCAC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTTTCCGATAACGAGCTaGAACCAGTTTCCAAAACCA +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIFPITS*NQFPKP
Trigger: TGGTTTTGGAAACTGGTTCCAGCTCGTTATCGGAAA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGTGAAATGGCAACACTaGTTCAAGTATTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPVKWQH*FKYSWQ
Trigger: TTGCCAAGAATACTTGAACCAGTGTTGCCATTTCAC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp TTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCCTAAGACATTTCTTTTaGCAGCATTCAAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LFPPHIFLPNKFSACSLILRHFF*QHSRQE
Trigger: TTCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAG...GATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGGTACTTACAGTACTTaGACAAGGACTCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNGTYST*TRTQSF
Trigger: GAAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAAGCCCTGTTTCTTCTaGAATTTGTGCCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQKPCFF*NLCPSN
Trigger: GTTGCTTGGGCACAAATTCCAGAAGAAACAGGGCTT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCAATTGGTCCTCATTTaGTGTCAGACATACAGTCTC +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSQLVLI*CQTYSL
Trigger: GAGACTGTATGTCTGACACCAAATGAGGACCAATTG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCCACAGCATACTTTCTaGTCATCATCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVPQHTF*SSSNCS
Trigger: AGAACAATTTGATGATGACCAGAAAGTATGCTGTGG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTGGAGGACCCTTTATTaGTGTTTTGGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSWRTLY*CFGGFN
Trigger: ATTGAATCCCCCAAAACACCAATAAAGGGTCCTCCA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTGGAGGACCCTTTATTaGTGTTTTGGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNWRTLY*CFGGFN
Trigger: ATTGAATCCCCCAAAACACCAATAAAGGGTCCTCCA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAGAAAGGCTAGAGACTaGAGGACCCTTTATTGGTGT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQRKARD*RTLYWC
Trigger: ACACCAATAAAGGGTCCTCCAGTCTCTAGCCTTTCT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTCTTTGTAGAGCTTTaGTCCTGTATATTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVFFVEL*SCIFCS
Trigger: GGAACAGAATATACAGGACCAAAGCTCTACAAAGAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTATTGGATTTTGCACTaGGTTCTTTGTAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVYWILH*VLCRAL
Trigger: CAAAGCTCTACAAAGAACCCAGTGCAAAATCCAATA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTATAAAGATCTGAACTaGCATCCTGAATCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNYKDLN*HPESRN
Trigger: GTTCCGGGATTCAGGATGCCAGTTCAGATCTTTATA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGTTTTAGCGGGTATGTaGCTAAACTGTTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSVLAGM*LNCFLS
Trigger: TGACAGGAAACAGTTTAGCCACATACCCGCTAAAAC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGTGTTACTGGTCTTTTaGTCTGCCATAAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPVLLVF*SAINGY
Trigger: ATAGCCATTTATGGCAGACCAAAAGACCAGTAACAC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGTGTTACTGGTCTTTTaGTCTGCCATAAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISVLLVF*SAINGY
Trigger: ATAGCCATTTATGGCAGACCAAAAGACCAGTAACAC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCATTTTTCCTGGTCAGTaGCATAAAGACCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSIFPGQ*HKDLSV
Trigger: CACAGAAAGGTCTTTATGTCACTGACCAGGAAAAAT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAAGCTGAATACTGCTaGGCACACGCAATTACTTTT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKAEYC*AHAITF
Trigger: AAAAGTAATTGCGTGTGCTCAGCAGTATTCAGCTTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGGAGCTTCAACTGTGTaGTGTTCTTTCAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNGASTV*CSFSFC
Trigger: ACAAAAACTGAAAGAACATCACACAGTTGAAGCTCC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCATTACTCTTTATGGATaGAGCAGCATAGAGCATATC +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPITLYG*SSIEHI
Trigger: GATATGCTCTATGCTGCTTCATCCATAAAGAGTAAT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGAACAGTTCCGCCATaGACACCAAATAATTACTCT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSRTVPP*TPNNYS
Trigger: AGAGTAATTATTTGGTGTTCATGGCGGAACTGTTCT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAACATAAGACATAGATaGAGACCTTCTAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISNIRHR*RPSNSS
Trigger: GGAGGAATTAGAAGGTCTTCATCTATGTCTTATGTT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTTCAGGAATATCTTCTaGAGGAACGTGAATTCCAGT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSFRNIF*RNVNSS
Trigger: ACTGGAATTCACGTTCCTTCAGAAGATATTCCTGAA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGCCATAAATGGCTATaGATGGTAATTGCATCAACA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPCHKWL*MVIAST
Trigger: TGTTGATGCAATTACCATTCATAGCCATTTATGGCA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTTACATCTTCAGATTaGAAGACTACTCTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLTSSD*KTTLKV
Trigger: CACTTTGAGAGTAGTCTTTCAATCTGAAGATGTAAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTCTTCAATGCTCTCTaGTTCCTCTTCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISFFNAL*FLFSIY
Trigger: ATAAATGGAGAAGAGGAAGCAGAGAGCATTGAAGAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGTGTCTCGATCTGATTaGCAAACTCGTCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQVSRSD*QTRQEV
Trigger: TACTTCTTGACGAGTTTGGCAATCAGATCGAGACAC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGTAATGCTTCTTCAATaGTTGGTGTCTCGATCTGAT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNVMLLQ*LVSRSD
Trigger: ATCAGATCGAGACACCAAGCATTGAAGAAGCATTAC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAGCTTCCCTGGTGTTaGCAGTTCGAATATCATAAT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKLPWC*QFEYHN
Trigger: ATTATGATATTCGAACTGGCAACACCAGGGAAGCTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACACTACAGTAAGGAATaGTGTCCTTCCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQHYSKE*CPSHFL
Trigger: CAGAAAATGGGAAGGACAGCATTCCTTACTGTAGTG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGCTGCCCGTTTCATTaGCATATCATTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSSCPFH*HIIFCF
Trigger: AAAGCAGAAAATGATATGGCAATGAAACGGGCAGCT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp AGTTTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTTGCCATATCATTTTCTaGTTTTTGATCATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFSCFRLIYSCLINSLRACHIIF*FLIILR
Trigger: CCTCAGGATGATCAAAAAGCAGAAAATGATATGGCA...AGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTAAAAGGCTTGATGGCTaGAACAATGAACGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIKRLDG*NNERLS
Trigger: AGAAAGACGTTCATTGTTCCAGCCATCAAGCCTTTT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAAAAGGCTTGATGGCTaGAACAATGAACGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSKRLDG*NNERLS
Trigger: AGAAAGACGTTCATTGTTCCAGCCATCAAGCCTTTT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTCTTGAAGTTCCTCTaGCACATTTTCTGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFLKFL*HIFCPK
Trigger: TTTGGGACAGAAAATGTGCCAGAGGAACTTCAAGAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTAAGACATTTCTTTTaGCAGCATTCAAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLRHFF*QHSRQE
Trigger: TTCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGGTACTTACAGTACTTaGACAAGGACTCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQGTYST*TRTQSF
Trigger: GAAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGATTTCCTTTTCTTCTaGATTATGTCCACGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSDFLFF*IMSTLF
Trigger: GAACAGCGTGGACATAATCCAGAAGAAAAGGAAATC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCACAGCATACTTTCTaGTCATCATCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPQHTF*SSSNCS
Trigger: AGAACAATTTGATGATGACCAGAAAGTATGCTGTGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGTTCTTTGTAGAGCTTTaGTCCTGTATATTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLFFVEL*SCIFCS
Trigger: GGAACAGAATATACAGGACCAAAGCTCTACAAAGAA...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTATTGGATTTTGCACTaGGTTCTTTGTAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISYWILH*VLCRAL
Trigger: CAAAGCTCTACAAAGAACCCAGTGCAAAATCCAATA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGTATTGGATTTTGCACTaGGTTCTTTGTAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLYWILH*VLCRAL
Trigger: CAAAGCTCTACAAAGAACCCAGTGCAAAATCCAATA...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCACTCCAAAATACTGTaGTTTACATTCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISHSKIL*FTFQLF
Trigger: GAACAACTGGAATGTAAACCACAGTATTTTGGAGTG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTGGTTAAGCTCATGTaGTTTAAAGCGAACCTACTA +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLVKLM*FKANLL
Trigger: TAGTAGGTTCGCTTTAAACCACATGAGCTTAACCAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCCCAACTAACCCTCTaGTATACACTGTTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQPQLTL*YTLLKN
Trigger: GTTCTTTAACAGTGTATACCAGAGGGTTAGTTGGGG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAAAGCTGAATACTGCTaGGCACACGCAATTACTTTT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQKAEYC*AHAITF
Trigger: AAAAGTAATTGCGTGTGCTCAGCAGTATTCAGCTTT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTATTTATCCAGTACATaGCAGCGTCCTCAATATCAT +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIYLSST*QRPQYH
Trigger: ATGATATTGAGGACGCTGTCATGTACTGGATAAATA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGGAGCTTCAACTGTGTaGTGTTCTTTCAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQGASTV*CSFSFC
Trigger: ACAAAAACTGAAAGAACATCACACAGTTGAAGCTCC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACATTACTCTTTATGGATaGAGCAGCATAGAGCATATC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNITLYG*SSIEHI
Trigger: GATATGCTCTATGCTGCTTCATCCATAAAGAGTAAT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTCTTCATTACTCTTTATGGATaGAGCAGCATAGAGCATATC +
Preference number: 4 (lower is better)
Translates to: LIYSCLINSLRALSSSFFITLYG*SSIEHI
Trigger: GATATGCTCTATGCTGCTTCATCCATAAAGAGTAAT...GAAGAAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTCAGGAATATCTTCTaGAGGAACGTGAATTCCAGT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQFRNIF*RNVNSS
Trigger: ACTGGAATTCACGTTCCTTCAGAAGATATTCCTGAA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCAGCCAAACAGCAATaGGCTAAAGCATTTTGTATT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQPAKQQ*AKAFCI
Trigger: AATACAAAATGCTTTAGCTCATTGCTGTTTGGCTGG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCTTACATCTTCAGATTaGAAGACTACTCTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEILTSSD*KTTLKV
Trigger: CACTTTGAGAGTAGTCTTTCAATCTGAAGATGTAAG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCATTTGTCACAACACTaGAATATAACAGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIHLSQH*NITGSH
Trigger: ATGTGACCCTGTTATATTTCAGTGTTGTGACAAATG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATACGCATCTCATTTATaGTACAATACTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQYASHL*YNTVFP
Trigger: GGGGAAGACAGTATTGTATCATAAATGAGATGCGTA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTATCTCTACTTCCCATaGAAGAAAACAAACTACGCA +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNYLYFP*KKTNYA
Trigger: TGCGTAGTTTGTTTTCTTTCATGGGAAGTAGAGATA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTCTTCAATGCTCTCTaGTTCCTCTTCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFFNAL*FLFSIY
Trigger: ATAAATGGAGAAGAGGAAGCAGAGAGCATTGAAGAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAAAGCTTCCCTGGTGTTaGCAGTTCGAATATCATAAT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQKLPWC*QFEYHN
Trigger: ATTATGATATTCGAACTGGCAACACCAGGGAAGCTT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTGAGGATTCTCCATaGTCTCTTTTATATCTGCCA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQLEDSP*SLLYLP
Trigger: TGGCAGATATAAAAGAGAGCATGGAGAATCCTCAAG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAATCACCCAAGATTGTTaGTCTCTCATCTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQITQDC*SLICIN
Trigger: GTTAATGCAGATGAGAGAGCAACAATCTTGGGTGAT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCGCCTCATATATTCTTaGCTAATAAATTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSRLIYS*LINSLR
Trigger: ACGCAGAGAATTTATTAGGCAAGAATATATGAGGCG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR GCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCGCCTCATATATTCTTaGCTAATAAATTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNRLIYS*LINSLR
Trigger: ACGCAGAGAATTTATTAGGCAAGAATATATGAGGCG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCATACACTGTACATTaGTCAACAGTGTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQPYTVH*STVSMK
Trigger: TTTCATGGACACTGTTGAGCAATGTACAGTGTATGG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGATTTCCTTTTCTTCTaGATTATGTCCACGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQDFLFF*IMSTLF
Trigger: GAACAGCGTGGACATAATCCAGAAGAAAAGGAAATC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTTCTTTGTAGAGCTTTaGTCCTGTATATTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIFFVEL*SCIFCS
Trigger: GGAACAGAATATACAGGACCAAAGCTCTACAAAGAA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTCTTTGTAGAGCTTTaGTCCTGTATATTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFFVEL*SCIFCS
Trigger: GGAACAGAATATACAGGACCAAAGCTCTACAAAGAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTATTGGATTTTGCACTaGGTTCTTTGTAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNYWILH*VLCRAL
Trigger: CAAAGCTCTACAAAGAACCCAGTGCAAAATCCAATA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGTATTATGTGCTTATTaGATTTTGCACTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GRKDEVQIYHECSEASISVLCAY*ILHWVL
Trigger: AAGAACCCAGTGCAAAATCCAATAAGCACATAATAC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGTATTATGTGCTTATTaGATTTTGCACTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPVLCAY*ILHWVL
Trigger: AAGAACCCAGTGCAAAATCCAATAAGCACATAATAC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGGTATTATGTGCTTATTaGATTTTGCACTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLVLCAY*ILHWVL
Trigger: AAGAACCCAGTGCAAAATCCAATAAGCACATAATAC...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCACTCCAAAATACTGTaGTTTACATTCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIHSKIL*FTFQLF
Trigger: GAACAACTGGAATGTAAACCACAGTATTTTGGAGTG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAGAGTTACATATCCTaGTCTCTTACATGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKSYIS*SLTCKQ
Trigger: CTGTTTGCATGTAAGAGACCAGGATATGTAACTCTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CCA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTAAGAGTTACATATCCTaGTCTCTTACATGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIKSYIS*SLTCKQ
Trigger: CTGTTTGCATGTAAGAGACCAGGATATGTAACTCTT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATATTTATCCAGTACATaGCAGCGTCCTCAATATCAT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQYLSST*QRPQYH
Trigger: ATGATATTGAGGACGCTGTCATGTACTGGATAAATA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR TCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAATTACTCTTTATGGATaGAGCAGCATAGAGCATATC +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQITLYG*SSIEHI
Trigger: GATATGCTCTATGCTGCTTCATCCATAAAGAGTAAT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATCAAATGATACGCCATaGACTGATGATCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQSNDTP*TDDLFS
Trigger: AGAGAAAAGATCATCAGTGCATGGCGTATCATTTGA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR GCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTCTTCAATGCTCTCTaGTTCCTCTTCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQFFNAL*FLFSIY
Trigger: ATAAATGGAGAAGAGGAAGCAGAGAGCATTGAAGAA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTAAGACATTTCTTTTaGCAGCATTCAAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQLRHFF*QHSRQE
Trigger: TTCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CCA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGTATTATGTGCTTATTaGATTTTGCACTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RKDEVQIYHECSEASISQVLCAY*ILHWVL
Trigger: AAGAACCCAGTGCAAAATCCAATAAGCACATAATAC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 90 bp ATGCACCATTTCAGAGGCCAACAGCTGGGTAGTGTCCCGTCCCTGTaGAAGCCCTGTTTCTTCTGGAATTTGTGCCCAAGCAACCACATG +
Preference number: 5 (lower is better)
Translates to: MHHFRGQQLGSVPSL*KPCFFWNLCPSNHM
Trigger: CATGTGGTTGCTTGGGCACAAATTCCAGAAGAAACAGGGCTTCCACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGAAATGGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 90 bp GGAGCAGTGGGTGGGAAAACGGGTTTAGGAGGGGGTTCTGTGGGTTaGTTCAATTGGTCCTCATTTGGTGTCAGACATACAGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GAVGGKTGLGGGSVG*FNWSSFGVRHTVSV
Trigger: CACAGAGACTGTATGTCTGACACCAAATGAGGACCAATTGAATCAACCCACAGAACCCCCTCCTAAACCCGTTTTCCCACCCACTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 90 bp GGGGAGTCTGAGGAGAATGGTGCAATGGCTGATGACAGGCCTGCCTaGTTAGAAGGCTTAAAATCTCGAATCTGTTTCTGTGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: GESEENGAMADDRPA*LEGLKSRICFCGEG
Trigger: ACCCTCTCCACAGAAACAGATTCGAGATTTTAAGCCTTCTAAGCAGGCAGGCCTGTCATCAGCCATTGCACCATTCTCCTCAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 90 bp GGTAGTGTCCCGTCCCTGTGGAAGCCCTGTTTCTTCTGGAATTTGTaGCCAAGCAACCACATGAGGAATATTAAGTTCAGAGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GSVPSLWKPCFFWNL*PSNHMRNIKFRAFW
Trigger: CCAGAAGGCTCTGAACTTAATATTCCTCATGTGGTTGCTTGGGCACAAATTCCAGAAGAAACAGGGCTTCCACAGGGACGGGACACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 90 bp TGGGCTTCTATAGCACGCCTCTTTTCTTCTAGTTTCATCCTAAGATaGACCATTTCAGAGGCCAACAGCTGGGTAGTGTCCCGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: WASIARLFSSSFILR*TISEANSWVVSRPC
Trigger: ACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGAAATGGTGCATCTTAGGATGAAACTAGAAGAAAAGAGGCGTGCTATAGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 90 bp AGAAGAAGCACTGCTGCCTGGCTGAGACTTGGTACTTACAGTACTTaGACAAGGACTCAAAGCTTCCCTGGTGTTGCCAGTTCGAATATC +
Preference number: 5 (lower is better)
Translates to: RRSTAAWLRLGTYST*TRTQSFPGVASSNI
Trigger: GATATTCGAACTGGCAACACCAGGGAAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 90 bp TCTTCTAGTTTCATCCTAAGATGCACCATTTCAGAGGCCAACAGCTaGGTAGTGTCCCGTCCCTGTGGAAGCCCTGTTTCTTCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SSSFILRCTISEANS*VVSRPCGSPVSSGI
Trigger: AATTCCAGAAGAAACAGGGCTTCCACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGAAATGGTGCATCTTAGGATGAAACTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCACCAGCCAGGCCAGATaGCAGGCGATTTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVTSQAR*QAILAL
Trigger: CAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGGT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCACCAGCCAGGCCAGATaGCAGGCGATTTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISTSQAR*QAILAL
Trigger: CAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGGT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTCTGTCCCAAAGGCTTaGGCCACCAGCCAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSVPKA*ATSQAR
Trigger: TCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAGA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 90 bp CTGGTCATTTTAACTCCAGAACTAGAAGAAGCACTGCTGCCTGGCTaGGACTTGGTACTTACAGTACTTGGACAAGGACTCAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LVILTPELEEALLPG*DLVLTVLGQGLKAS
Trigger: GGAAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCTTCTAGTTCTGGAGTTAAAATGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACACCAGCCAGGCCAGATaGCAGGCGATTTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNTSQAR*QAILAL
Trigger: CAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGGT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTACAGGTTCAGCTCCTaGTGGACGAACAACACGAGG +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMYRFSS*WTNNTR
Trigger: CCTCGTGTTGTTCGTCCACAAGGAGCTGAACCTGTA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCTACAGGTTCAGCTCCTaGTGGACGAACAACACGAGG +
Preference number: 5 (lower is better)
Translates to: QLFPPHIFLPNKFSACSLYRFSS*WTNNTR
Trigger: CCTCGTGTTGTTCGTCCACAAGGAGCTGAACCTGTA...GAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGGATCTTGGCGTCCTCTaGCCTGAATGTACACTCTCG +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMDLGVL*PECTLS
Trigger: CGAGAGTGTACATTCAGGCAAGAGGACGCCAAGATC...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS CCA 90 bp AAAGCTGGTCATTTTAACTCCAGAACTAGAAGAAGCACTGCTGCCTaGCTGAGACTTGGTACTTACAGTACTTGGACAAGGACTCAAAGC +
Preference number: 5 (lower is better)
Translates to: KAGHFNSRTRRSTAA*LRLGTYSTWTRTQS
Trigger: GCTTTGAGTCCTTGTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCTTCTAGTTCTGGAGTTAAAATGACCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATCTGTCCCAAAGGCTTaGGCCACCAGCCAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQSVPKA*ATSQAR
Trigger: TCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAGA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 90 bp TCTCCTTCATTTAAAGTTTCTTCTGAGGGGCTTGCCAGGTTCCACTaGTTCTCAGGATCAATAGGTGTAGTTGGAGACTTTAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: SPSFKVSSEGLARFH*FSGSIGVVGDFSHL
Trigger: CAAATGGCTAAAGTCTCCAACTACACCTATTGATCCTGAGAAGCAGTGGAACCTGGCAAGCCCCTCAGAAGAAACTTTAAATGAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTACAGGTTCAGCTCCTaGTGGACGAACAACACGAGG +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISYRFSS*WTNNTR
Trigger: CCTCGTGTTGTTCGTCCACAAGGAGCTGAACCTGTA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTTCTTCTGAGGGGCTaGCCAGGTTCCACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISFLLRG*PGSTAS
Trigger: AGAAGCAGTGGAACCTGGCAAGCCCCTCAGAAGAAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTCTGCTTCCAACTGTaGTTTCCGGAGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMFCFQL*FPELSF
Trigger: GAAACTCAGCTCCGGAAACAACAGTTGGAAGCAGAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCTACAGACTCTGATCTaGGCGTCCTCTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVLQTLI*ASSCLN
Trigger: ATTCAGGCAAGAGGACGCCAAGATCAGAGTCTGTAG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCGATAACGAGCCTTTaGACCTCCTGGAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPITSL*TSWSFN
Trigger: GTTGAAGCTCCAGGAGGTCAAAAGGCTCGTTATCGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCGATAACGAGCCTTTaGACCTCCTGGAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISPITSL*TSWSFN
Trigger: GTTGAAGCTCCAGGAGGTCAAAAGGCTCGTTATCGG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358823.6
ENST00000413307.6
CDS TCA 90 bp TTCTCAGGATCAATAGGTGTAGTTGGAGACTTTAGCCATTTGGCTTaGGGATTCTCCATGCTCTCTTTTATATCTGCCAGTGACTTGCTC +
Preference number: 5 (lower is better)
Translates to: FSGSIGVVGDFSHLA*GFSMLSFISASDLL
Trigger: GAGCAAGTCACTGGCAGATATAAAAGAGAGCATGGAGAATCCTCAAGCCAAATGGCTAAAGTCTCCAACTACACCTATTGATCCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 90 bp GTTGATTCAATTGGTCCTCATTTGGTGTCAGACATACAGTCTCTGTaGCAGGCAGTGATAGGACTTCAGAGACTGTTGACTCAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: VDSIGPHLVSDIQSL*QAVIGLQRLLTQKV
Trigger: AACCTTTTGAGTCAACAGTCTCTGAAGTCCTATCACTGCCTGTCACAGAGACTGTATGTCTGACACCAAATGAGGACCAATTGAATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 90 bp AAGAAGTTGTTGATGCATTCTCCCAGTCTTTTTCTCCATTTCGACTaGCACAACGACTTGGAGATAAGAAGCCTTCTACAGACTCTGATC +
Preference number: 5 (lower is better)
Translates to: KKLLMHSPSLFLHFD*HNDLEIRSLLQTLI
Trigger: GATCAGAGTCTGTAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAAAAGACTGGGAGAATGCATCAACAACTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTTGCAGCATCACTCTaGAGAATGAGACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVFAASL*RMRLPA
Trigger: TGCTGGGAGTCTCATTCTCAAGAGTGATGCTGCAAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMWNARQ*LKQCLL
Trigger: GAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTTTCTTCTGAGGGGCTaGCCAGGTTCCACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIFLLRG*PGSTAS
Trigger: AGAAGCAGTGGAACCTGGCAAGCCCCTCAGAAGAAA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCTTCTGCTTCCAACTGTaGTTTCCGGAGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVFCFQL*FPELSF
Trigger: GAAACTCAGCTCCGGAAACAACAGTTGGAAGCAGAA...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTTTCTGCTTCCAACTGTaGTTTCCGGAGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: PPHIFLPNKFSACSLIFFFCFQL*FPELSF
Trigger: GAAACTCAGCTCCGGAAACAACAGTTGGAAGCAGAA...AAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGATCTTGGCGTCCTCTaGCCTGAATGTACACTCTCG +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNDLGVL*PECTLS
Trigger: CGAGAGTGTACATTCAGGCAAGAGGACGCCAAGATC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGAAGCCACTGAAGAAGTaGTTGATGCATTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMKPLKK*LMHSPS
Trigger: ACTGGGAGAATGCATCAACAACTTCTTCAGTGGCTT...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCGGGGACGTGAATACCTaGAAGGGAAGTCAGAACTAC +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISGDVNT*KGSQNY
Trigger: GTAGTTCTGACTTCCCTTCAAGGTATTCACGTCCCC...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413307.6
CDS TCA 90 bp ATCACCCAAGATTGTTGCTCTCTCATCTGCATTAACATCTCCTGCTaGAGTGACAAGCGTTGCATTTCTTGTTGTAGAAAATGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: ITQDCCSLICINISC*SDKRCISCCRKCRD
Trigger: ATCCCTGCATTTTCTACAACAAGAAATGCAACGCTTGTCACTTCAGCAGGAGATGTTAATGCAGATGAGAGAGCAACAATCTTGGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 90 bp AACAGGTGGTTTGATGTGTTCCTGGTCATACTGATCTGTGTAAAATaGTTCTTGAAGTTCCTCTGGCACATTTTCTGTCCCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: NRWFDVFLVILICVK*FLKFLWHIFCPKGF
Trigger: AAAGCCTTTGGGACAGAAAATGTGCCAGAGGAACTTCAAGAACCATTTTACACAGATCAGTATGACCAGGAACACATCAAACCACCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTTTGGAAGGAGACTTTaGACCTCCTGGAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISFGRRL*TSWSFN
Trigger: GTTGAAGCTCCAGGAGGTCAAAAGTCTCCTTCCAAA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGAAGCCATTAGCAATTaGGTCTGGCTGAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPEAISN*VWLRCM
Trigger: CATACACCTCAGCCAGACCAAATTGCTAATGGCTTC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGGTGTCTACTTCAGTATaGTCAGTTATGGGACTCAAG +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMVSTSV*SVMGLK
Trigger: CTTGAGTCCCATAACTGACAATACTGAAGTAGACAC...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCATATCTGCCAGTGACTaGCTCCTTTGTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVISASD*LLCPSV
Trigger: AACTGATGGACAAAGGAGCAAGTCACTGGCAGATAT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTTCTTCTGAGGGGCTaGCCAGGTTCCACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQFLLRG*PGSTAS
Trigger: AGAAGCAGTGGAACCTGGCAAGCCCCTCAGAAGAAA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGGGGGTTCTGTGGGTaGATTCAATTGGTCCTCATT +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISRGFCG*IQLVLI
Trigger: AATGAGGACCAATTGAATCAACCCACAGAACCCCCT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAGGGGGTTCTGTGGGTaGATTCAATTGGTCCTCATT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPRGFCG*IQLVLI
Trigger: AATGAGGACCAATTGAATCAACCCACAGAACCCCCT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTCTGCTTCCAACTGTaGTTTCCGGAGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFCFQL*FPELSF
Trigger: GAAACTCAGCTCCGGAAACAACAGTTGGAAGCAGAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGGAGGACCCTTTATaGGTGTTTTGGGGGATTCAA +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISLEDPL*VFWGIQ
Trigger: TTGAATCCCCCAAAACACCAATAAAGGGTCCTCCAG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGATCTTGGCGTCCTCTaGCCTGAATGTACACTCTCG +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQDLGVL*PECTLS
Trigger: CGAGAGTGTACATTCAGGCAAGAGGACGCCAAGATC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCTACAGACTCTGATCTaGGCGTCCTCTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEILQTLI*ASSCLN
Trigger: ATTCAGGCAAGAGGACGCCAAGATCAGAGTCTGTAG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS TCA 90 bp GTTTCTTGTGGAGATCTCGTTCAGTTACCAATTTTTCCTGGTCAGTaGCATAAAGACCTTTCTGTGCTAAAGCCTGGATTACAGCATCAT +
Preference number: 5 (lower is better)
Translates to: VSCGDLVQLPIFPGQ*HKDLSVLKPGLQHH
Trigger: ATGATGCTGTAATCCAGGCTTTAGCACAGAAAGGTCTTTATGTCACTGACCAGGAAAAATTGGTAACTGAACGAGATCTCCACAAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTTTTGCAGCATCACTCTaGAGAATGAGACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIFAASL*RMRLPA
Trigger: TGCTGGGAGTCTCATTCTCAAGAGTGATGCTGCAAA...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTTGCAGCATCACTCTaGAGAATGAGACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFAASL*RMRLPA
Trigger: TGCTGGGAGTCTCATTCTCAAGAGTGATGCTGCAAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCATCTGTATGGGTTTCTaGTGGAGATCTCGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVICMGF*WRSRSV
Trigger: AACTGAACGAGATCTCCACAAGAAACCCATACAGAT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISWNARQ*LKQCLL
Trigger: GAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCTCTAAGACATTTCTTTaGGCAGCATTCAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: QLFPPHIFLPNKFSACSLSKTFL*AAFKTG
Trigger: TCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAGA...GAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGAAGCCATTAGCAATTaGGTCTGGCTGAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNEAISN*VWLRCM
Trigger: CATACACCTCAGCCAGACCAAATTGCTAATGGCTTC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCAGTTTCCTGAATTTTaGTTCAGCAAAGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMQFPEF*FSKAGH
Trigger: ATGACCAGCTTTGCTGAACAAAAATTCAGGAAACTG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTTCTGGTGTAGTTTTTaGAGAACTGCTTCCACTACT +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMFWCSF*RTASTT
Trigger: AGTAGTGGAAGCAGTTCTCAAAAAACTACACCAGAA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGTTTCTTCTGGAATTaGTGCCCAAGCAACCACATG +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPCFFWN*CPSNHM
Trigger: CATGTGGTTGCTTGGGCACAAATTCCAGAAGAAACA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGGGGGTTCTGTGGGTaGATTCAATTGGTCCTCATT +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSRGFCG*IQLVLI
Trigger: AATGAGGACCAATTGAATCAACCCACAGAACCCCCT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCAAGCTGCCCGTTTCATaGCCATATCATTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVKLPVS*PYHFLL
Trigger: AAGCAGAAAATGATATGGCAATGAAACGGGCAGCTT...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCTCAGTTTTACGCCTaGTTTCCTCCTTCTTATGCT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPQFYA*FPPSYA
Trigger: AGCATAAGAAGGAGGAAACAAGGCGTAAAACTGAGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGTTTCAGTTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCCTCAGTTTTACGCCTaGTTTCCTCCTTCTTATGCT +
Preference number: 5 (lower is better)
Translates to: SFSCFRLIYSCLINSLRAPQFYA*FPPSYA
Trigger: AGCATAAGAAGGAGGAAACAAGGCGTAAAACTGAGG...AGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAACTGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCTGGAGGACCCTTTATaGGTGTTTTGGGGGATTCAA +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNLEDPL*VFWGIQ
Trigger: TTGAATCCCCCAAAACACCAATAAAGGGTCCTCCAG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTACAGACTCTGATCTaGGCGTCCTCTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQLQTLI*ASSCLN
Trigger: ATTCAGGCAAGAGGACGCCAAGATCAGAGTCTGTAG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGACTGCCACAACGACTaGGAGATAAGAAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSDCHND*EIRSLL
Trigger: TAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTGACTGCCACAACGACTaGGAGATAAGAAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIDCHND*EIRSLL
Trigger: TAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTC...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGACTGCCACAACGACTaGGAGATAAGAAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNDCHND*EIRSLL
Trigger: TAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCCACTGAAGAAGTTGTaGATGCATTCTCCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPPLKKL*MHSPSL
Trigger: AAGACTGGGAGAATGCATCAACAACTTCTTCAGTGG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGTGTGTTTCAGTAAGGTaGACGAAAATCCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMCVSVR*TKILRL
Trigger: AAGTCTGAGGATTTTCGTCAACCTTACTGAAACACA...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCTGGTTCAAGTATTCTaGGCAAAATTCTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMLVQVF*AKFLNQ
Trigger: CTGATTCAAGAATTTTGCCAAGAATACTTGAACCAG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTATGCTTCTTCAATGCTaGGTGTCTCGATCTGATTGC +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIMLLQC*VSRSDC
Trigger: GCAATCAGATCGAGACACCAAGCATTGAAGAAGCAT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACATGCTTCTTCAATGCTaGGTGTCTCGATCTGATTGC +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNMLLQC*VSRSDC
Trigger: GCAATCAGATCGAGACACCAAGCATTGAAGAAGCAT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGAAGCCATTAGCAATTaGGTCTGGCTGAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQEAISN*VWLRCM
Trigger: CATACACCTCAGCCAGACCAAATTGCTAATGGCTTC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCGTGTCTACTTCAGTATaGTCAGTTATGGGACTCAAG +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPVSTSV*SVMGLK
Trigger: CTTGAGTCCCATAACTGACAATACTGAAGTAGACAC...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGGTACTTACAGTACTaGGACAAGGACTCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPWYLQY*DKDSKL
Trigger: AAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACCA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTATATCTGCCAGTGACTaGCTCCTTTGTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIISASD*LLCPSV
Trigger: AACTGATGGACAAAGGAGCAAGTCACTGGCAGATAT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTCAATTGGTCCTCATTaGGTGTCAGACATACAGTCT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSIGPH*VSDIQS
Trigger: AGACTGTATGTCTGACACCAAATGAGGACCAATTGA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCTCAATTGGTCCTCATTaGGTGTCAGACATACAGTCT +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISSIGPH*VSDIQS
Trigger: AGACTGTATGTCTGACACCAAATGAGGACCAATTGA...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCTGGTCATCATCAAATaGTTCTTTATCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMLVIIK*FFITFS
Trigger: GGAGAAAGTGATAAAGAACAATTTGATGATGACCAG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGCTGCCCGTTTCATaGCCATATCATTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPKLPVS*PYHFLL
Trigger: AAGCAGAAAATGATATGGCAATGAAACGGGCAGCTT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCCTCAGTTTTACGCCTaGTTTCCTCCTTCTTATGCT +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIPQFYA*FPPSYA
Trigger: AGCATAAGAAGGAGGAAACAAGGCGTAAAACTGAGG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTCCACTGAAGAAGTTGTaGATGCATTCTCCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEIPLKKL*MHSPSL
Trigger: AAGACTGGGAGAATGCATCAACAACTTCTTCAGTGG...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAGCCACTGAAGAAGTaGTTGATGCATTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKPLKK*LMHSPS
Trigger: ACTGGGAGAATGCATCAACAACTTCTTCAGTGGCTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CAGAATTTGACAGGCTGCACTGGTAACCACGACAAATGTTTGGCAAACTTAATGCTAAATTATTCTGAGTaGGCCAGAAGTGGTGTAAAA +
Preference number: 5 (lower is better)
Translates to: QNLTGCTGNHDKCLANLMLNYSE*ARSGVK
Trigger: TTTTACACCACTTCTGGCCAACTCAGAATAATTTAG...CATTAAGTTTGCCAAACATTTGTCGTGGTTACCAGTGCAGCCTGTCAAATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCACCATACACTGTACATaGCTCAACAGTGTCCATGAA +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPTIHCT*LNSVHE
Trigger: TTCATGGACACTGTTGAGCAATGTACAGTGTATGGT...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCATCTGTATGGGTTTCTaGTGGAGATCTCGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSICMGF*WRSRSV
Trigger: AACTGAACGAGATCTCCACAAGAAACCCATACAGAT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTTGCTTAAGCAATGTTaGCTCTTTCCGATAACGAGC +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSLLKQC*LFPITS
Trigger: GCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTGCTTAAGCAATGTTaGCTCTTTCCGATAACGAGC +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNLLKQC*LFPITS
Trigger: GCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQWNARQ*LKQCLL
Trigger: GAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTCTGGTTCAAGTATTCTaGGCAAAATTCTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: PPHIFLPNKFSACSLIFFLVQVF*AKFLNQ
Trigger: CTGATTCAAGAATTTTGCCAAGAATACTTGAACCAG...AAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp CGCATCTCATTTATGATACAATACTGTCTTCCCCCGCTAGTTTACACATTTGTCCATTCAAGACAGGAATaGAAGGCATATCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: RISFMIQYCLPPLVYTFVHSRQE*KAYLLQ
Trigger: CTGTAAAAGATATGCCTTCAATTCCTGTCTTGAATG...GACAAATGTGTAAACTAGCGGGGGAAGACAGTATTGTATCATAAATGAGATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp TTGTTTCCGCCTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCCATTCAAGACAGGAATaGAAGGCATATCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: LFPPHIFLPNKFSACSLIHSRQE*KAYLLQ
Trigger: CTGTAAAAGATATGCCTTCAATTCCTGTCTTGAATG...GATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAGGCGGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTCTAAGACATTTCTTTaGGCAGCATTCAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPSKTFL*AAFKTG
Trigger: TCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAGA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGTGTCTACTTCAGTATaGTCAGTTATGGGACTCAAG +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNVSTSV*SVMGLK
Trigger: CTTGAGTCCCATAACTGACAATACTGAAGTAGACAC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCAGTTTCCTGAATTTTaGTTCAGCAAAGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPQFPEF*FSKAGH
Trigger: ATGACCAGCTTTGCTGAACAAAAATTCAGGAAACTG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTTCTGGTGTAGTTTTTaGAGAACTGCTTCCACTACT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPFWCSF*RTASTT
Trigger: AGTAGTGGAAGCAGTTCTCAAAAAACTACACCAGAA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATGTTTCTTCTGGAATTaGTGCCCAAGCAACCACATG +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQCFFWN*CPSNHM
Trigger: CATGTGGTTGCTTGGGCACAAATTCCAGAAGAAACA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAATATCTGCCAGTGACTaGCTCCTTTGTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQISASD*LLCPSV
Trigger: AACTGATGGACAAAGGAGCAAGTCACTGGCAGATAT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTCAATTGGTCCTCATTaGGTGTCAGACATACAGTCT +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSSIGPH*VSDIQS
Trigger: AGACTGTATGTCTGACACCAAATGAGGACCAATTGA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACAAGCTGCCCGTTTCATaGCCATATCATTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNKLPVS*PYHFLL
Trigger: AAGCAGAAAATGATATGGCAATGAAACGGGCAGCTT...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp CTCATATATTCTTGCCTAATAAATTCTCTGCGTGCTCTCTCATCTTCTTTCTTCAAGCTGCCCGTTTCATaGCCATATCATTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LIYSCLINSLRALSSSFFKLPVS*PYHFLL
Trigger: AAGCAGAAAATGATATGGCAATGAAACGGGCAGCTT...GAAGAAAGAAGATGAGAGAGCACGCAGAGAATTTATTAGGCAAGAATATATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCACTGAAGAAGTTGTaGATGCATTCTCCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQPLKKL*MHSPSL
Trigger: AAGACTGGGAGAATGCATCAACAACTTCTTCAGTGG...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp TCTAGGCCCATGAGAGTACATTCTCTTGAATGGATAAAAGACTTCTACAGTTTGGTTCTTTGTAGAGCTTaGGTCCTGTATATTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SRPMRVHSLEWIKDFYSLVLCRA*VLYILF
Trigger: GAACAGAATATACAGGACCAAAGCTCTACAAAGAAC...CAAACTGTAGAAGTCTTTTATCCATTCAAGAGAATGTACTCTCATGGGCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475326.1
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGGTTTACATTCCAGTaGTTCATGACAACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPWFTFQ*FMTTEL
Trigger: AAGCTCTGTTGTCATGAACAACTGGAATGTAAACCA...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp CAACTAACCCTCTGGTATACACTGTTAAAGAACAAAGATCATGTAGAGGAGATTACCATACACTGTACATaGCTCAACAGTGTCCATGAA +
Preference number: 5 (lower is better)
Translates to: QLTLWYTLLKNKDHVEEITIHCT*LNSVHE
Trigger: TTCATGGACACTGTTGAGCAATGTACAGTGTATGGT...AATCTCCTCTACATGATCTTTGTTCTTTAACAGTGTATACCAGAGGGTTAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS TCA 90 bp TTTAGTTCATTTGTGTTAAGGGGCACACAAGATTTGAGGTCACTGTaGGAATCTATATTAAGTTCTTCTTCAATGCTCTCTGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FSSFVLRGTQDLRSL*ESILSSSSMLSASS
Trigger: AGAGGAAGCAGAGAGCATTGAAGAAGAACTTAATATAGATTCTCACAGTGACCTCAAATCTTGTGTGCCCCTTAACACAAATGAACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 90 bp ATCTCTCAACGAAGAATCTTCGTCCATAGTTTCAGGAATATCTTCTaGAGGAACGTGAATTCCAGTGTCTACTTCAGTATTGTCAGTTAT +
Preference number: 5 (lower is better)
Translates to: ISQRRIFVHSFRNIF*RNVNSSVYFSIVSY
Trigger: ATAACTGACAATACTGAAGTAGACACTGGAATTCACGTTCCTTCAGAAGATATTCCTGAAACTATGGACGAAGATTCTTCGTTGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAATCTGTATGGGTTTCTaGTGGAGATCTCGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQICMGF*WRSRSV
Trigger: AACTGAACGAGATCTCCACAAGAAACCCATACAGAT...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATTGCTTAAGCAATGTTaGCTCTTTCCGATAACGAGC +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQLLKQC*LFPITS
Trigger: GCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCTGGTTCAAGTATTCTaGGCAAAATTCTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISLVQVF*AKFLNQ
Trigger: CTGATTCAAGAATTTTGCCAAGAATACTTGAACCAG...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCCTGGTTCAAGTATTCTaGGCAAAATTCTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: AGKMKCKFTMNVLKQVFPLVQVF*AKFLNQ
Trigger: CTGATTCAAGAATTTTGCCAAGAATACTTGAACCAG...GGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCTCTAAGACATTTCTTTaGGCAGCATTCAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSSKTFL*AAFKTG
Trigger: TCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAGA...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATGGTACTTACAGTACTaGGACAAGGACTCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQWYLQY*DKDSKL
Trigger: AAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTACCA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCAGTTTCCTGAATTTTaGTTCAGCAAAGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSQFPEF*FSKAGH
Trigger: ATGACCAGCTTTGCTGAACAAAAATTCAGGAAACTG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTTCTGGTGTAGTTTTTaGAGAACTGCTTCCACTACT +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNFWCSF*RTASTT
Trigger: AGTAGTGGAAGCAGTTCTCAAAAAACTACACCAGAA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCATTTTCTGTCTCTGTTaGGTAAAAGCAGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISIFCLC*VKAASI
Trigger: AATGGAAGCTGCTTTTACCAAACAGAGACAGAAAAT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCGTTCTTTGTAGAGCTTaGGTCCTGTATATTCTGTTC +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSVLCRA*VLYILF
Trigger: GAACAGAATATACAGGACCAAAGCTCTACAAAGAAC...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACGTTCTTTGTAGAGCTTaGGTCCTGTATATTCTGTTC +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNVLCRA*VLYILF
Trigger: GAACAGAATATACAGGACCAAAGCTCTACAAAGAAC...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACTGGTTTACATTCCAGTaGTTCATGACAACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNWFTFQ*FMTTEL
Trigger: AAGCTCTGTTGTCATGAACAACTGGAATGTAAACCA...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGCAGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCAGACTTCTTGAGAACTaGTTTCAGGAAGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: GRKDEVQIYHECSEASISRLLEN*FQEVLH
Trigger: ATGTAAGACTTCCTGAAACAAGTTCTCAAGAAGTCT...GGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS CCA 90 bp CAGAGTAAGTCCTTCATTACTAATAGAACGAGTGATTCCTCGGTTTaGAGTGGATCTCTGTACACTATCTTCTTTATCAAAAGAAATATC +
Preference number: 5 (lower is better)
Translates to: QSKSFITNRTSDSSV*SGSLYTIFFIKRNI
Trigger: GATATTTCTTTTGATAAAGAAGATAGTGTACAGAGATCCACTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGACTTACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCCATTCAAGACAGGAATaGAAGGCATATCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSHSRQE*KAYLLQ
Trigger: CTGTAAAAGATATGCCTTCAATTCCTGTCTTGAATG...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCATTCAAGACAGGAATaGAAGGCATATCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNHSRQE*KAYLLQ
Trigger: CTGTAAAAGATATGCCTTCAATTCCTGTCTTGAATG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATCTAAGACATTTCTTTaGGCAGCATTCAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQSKTFL*AAFKTG
Trigger: TCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAGA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCTGGTCATCATCAAATaGTTCTTTATCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNLVIIK*FFITFS
Trigger: GGAGAAAGTGATAAAGAACAATTTGATGATGACCAG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAAGTTCTTTGTAGAGCTTaGGTCCTGTATATTCTGTTC +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQVLCRA*VLYILF
Trigger: GAACAGAATATACAGGACCAAAGCTCTACAAAGAAC...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS-3UTR CAA 90 bp GGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAACCTAAATTATTCTGAGTaGGCCAGAAGTGGTGTAAAA +
Preference number: 5 (lower is better)
Translates to: GKMKCKFTMNVLKQVFPNLNYSE*ARSGVK
Trigger: TTTTACACCACTTCTGGCCAACTCAGAATAATTTAG...GTTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp AAAAACTACACTGTACCAGGAAATAGCAAGTATGACAGTATTTTACAGCACAGCAGACTTCTTGAGAACTaGTTTCAGGAAGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: KNYTVPGNSKYDSILQHSRLLEN*FQEVLH
Trigger: ATGTAAGACTTCCTGAAACAAGTTCTCAAGAAGTCT...GCTGTGCTGTAAAATACTGTCATACTTGCTATTTCCTGGTACAGTGTAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS-3UTR CAA 90 bp AGGAAAGATGAAGTGCAAATTTACCATGAATGTTCTGAAGCAAGTATTTCCCAATGTGTTTCAGTAAGGTaGACGAAAATCCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: RKDEVQIYHECSEASISQCVSVR*TKILRL
Trigger: AAGTCTGAGGATTTTCGTCAACCTTACTGAAACACA...TTGGGAAATACTTGCTTCAGAACATTCATGGTAAATTTGCACTTCATCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236925.8
ENST00000358823.6
CDS CCA 72 bp GCGGCTCCTCGGGATGTCCCGGCCCTAACCTTCACATaGCGTGGCCTCGCCACCACGGGGGTCGGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: AAPRDVPALTFT*RGLATTGVGRE
Trigger: CTCCCTCCCGACCCCCGTGGTGGCGAGGCCACGCCATGTGAAGGTTAGGGCCGGGACATCCCGAGGAGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358823.6
CDS CCA 72 bp TCCTCGGGATGTCCCGGCCCTAACCTTCACATGGCGTaGCCTCGCCACCACGGGGGTCGGGAGGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: SSGCPGPNLHMA*PRHHGGREGGR
Trigger: TCTCCCTCCCTCCCGACCCCCGTGGTGGCGAGGCCACGCCATGTGAAGGTTAGGGCCGGGACATCCCGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358823.6
CDS CCA 72 bp TTCAGAGGCCAACAGCTGGGTAGTGTCCCGTCCCTGTaGAAGCCCTGTTTCTTCTGGAATTTGTGCCCAAGC +
Preference number: 6 (lower is better)
Translates to: FRGQQLGSVPSL*KPCFFWNLCPS
Trigger: GCTTGGGCACAAATTCCAGAAGAAACAGGGCTTCCACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 72 bp GAAGTTCCTCTGGCACATTTTCTGTCCCAAAGGCTTTaGCCACCAGCCAGGCCAGATTGCAGGCGATTTTGG +
Preference number: 6 (lower is better)
Translates to: EVPLAHFLSQRL*PPARPDCRRFW
Trigger: CCAAAATCGCCTGCAATCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAGAAAATGTGCCAGAGGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 72 bp TTCATCCTAAGATGCACCATTTCAGAGGCCAACAGCTaGGTAGTGTCCCGTCCCTGTGGAAGCCCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: FILRCTISEANS*VVSRPCGSPVS
Trigger: AGAAACAGGGCTTCCACAGGGACGGGACACTACCCAGCTGTTGGCCTCTGAAATGGTGCATCTTAGGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp GATGCACTTTTCCTGTTAGAAGACTGTGGAGATGGGTaGGTAGGACGAGGGGAGTCTGAGGAGAATGGTGCA +
Preference number: 6 (lower is better)
Translates to: DALFLLEDCGDG*VGRGESEENGA
Trigger: TGCACCATTCTCCTCAGACTCCCCTCGTCCTACTCACCCATCTCCACAGTCTTCTAACAGGAAAAGTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 90 bp CTGGGTAGTGTCCCGTCCCTGTGGAAGCCCTGTTTCTTCTGGAATTaGTGCCCAAGCAACCACATGAGGAATATTAAGTTCAGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LGSVPSLWKPCFFWN*CPSNHMRNIKFRAF
Trigger: GAAGGCTCTGAACTTAATATTCCTCATGTGGTTGCTTGGGCACAAATTCCAGAAGAAACAGGGCTTCCACAGGGACGGGACACTACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 90 bp TGGAGCAGTGGGTGGGAAAACGGGTTTAGGAGGGGGTTCTGTGGGTaGATTCAATTGGTCCTCATTTGGTGTCAGACATACAGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: WSSGWENGFRRGFCG*IQLVLIWCQTYSLC
Trigger: ACAGAGACTGTATGTCTGACACCAAATGAGGACCAATTGAATCAACCCACAGAACCCCCTCCTAAACCCGTTTTCCCACCCACTGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp GGGTGGGAAAACGGGTTTAGGAGGGGGTTCTGTGGGTaGATTCAATTGGTCCTCATTTGGTGTCAGACATAC +
Preference number: 6 (lower is better)
Translates to: GWENGFRRGFCG*IQLVLIWCQTY
Trigger: GTATGTCTGACACCAAATGAGGACCAATTGAATCAACCCACAGAACCCCCTCCTAAACCCGTTTTCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp GGTGGGAAAACGGGTTTAGGAGGGGGTTCTGTGGGTTaGTTCAATTGGTCCTCATTTGGTGTCAGACATACA +
Preference number: 6 (lower is better)
Translates to: GGKTGLGGGSVG*FNWSSFGVRHT
Trigger: TGTATGTCTGACACCAAATGAGGACCAATTGAATCAACCCACAGAACCCCCTCCTAAACCCGTTTTCCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp GATGAAGACCTTCTAATTCCTCCTGAGGCTGAAGAATaGGCCTGGGGACGTGAATACCTTGAAGGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: DEDLLIPPEAEE*AWGREYLEGKS
Trigger: TGACTTCCCTTCAAGGTATTCACGTCCCCAGGCTCATTCTTCAGCCTCAGGAGGAATTAGAAGGTCTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413307.6
CDS CCA 72 bp CCTGGAGAAATCATAGTGGTCAAAAGGCTTGATGGCTaGAACAATGAACGTCTTTCTCATCTCCCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: PGEIIVVKRLDG*NNERLSHLPGV
Trigger: GACCCCAGGGAGATGAGAAAGACGTTCATTGTTCCAGCCATCAAGCCTTTTGACCACTATGATTTCTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 90 bp ATGCATTCTCCCAGTCTTTTTCTCCATTTCGACTGCCACAACGACTaGGAGATAAGAAGCCTTCTACAGACTCTGATCTTGGCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: MHSPSLFLHFDCHND*EIRSLLQTLILASS
Trigger: AGAGGACGCCAAGATCAGAGTCTGTAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAAAAGACTGGGAGAATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp TTAACTCCAGAACTAGAAGAAGCACTGCTGCCTGGCTaGGACTTGGTACTTACAGTACTTGGACAAGGACTC +
Preference number: 6 (lower is better)
Translates to: LTPELEEALLPG*DLVLTVLGQGL
Trigger: GAGTCCTTGTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCTTCTAGTTCTGGAGTTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 72 bp GAGGAGAATGGTGCAATGGCTGATGACAGGCCTGCCTaGTTAGAAGGCTTAAAATCTCGAATCTGTTTCTGT +
Preference number: 6 (lower is better)
Translates to: EENGAMADDRPA*LEGLKSRICFC
Trigger: ACAGAAACAGATTCGAGATTTTAAGCCTTCTAAGCAGGCAGGCCTGTCATCAGCCATTGCACCATTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 72 bp CATTTTAACTCCAGAACTAGAAGAAGCACTGCTGCCTaGCTGAGACTTGGTACTTACAGTACTTGGACAAGG +
Preference number: 6 (lower is better)
Translates to: HFNSRTRRSTAA*LRLGTYSTWTR
Trigger: CCTTGTCCAAGTACTGTAAGTACCAAGTCTCAGCCAGGCAGCAGTGCTTCTTCTAGTTCTGGAGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp CCCAGTCTTTTTCTCCATTTCGACTGCCACAACGACTaGGAGATAAGAAGCCTTCTACAGACTCTGATCTTG +
Preference number: 6 (lower is better)
Translates to: PSLFLHFDCHND*EIRSLLQTLIL
Trigger: CAAGATCAGAGTCTGTAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAAAAGACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp TACCAATGGAATGCAAGGCAGTTGCTTAAGCAATGTTaGCTCTTTCCGATAACGAGCCTTTTGACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: YQWNARQLLKQC*LFPITSLLTSW
Trigger: CCAGGAGGTCAAAAGGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358823.6
ENST00000413307.6
CDS GCA 72 bp TTGATGCATTCTCCCAGTCTTTTTCTCCATTTCGACTaGCACAACGACTTGGAGATAAGAAGCCTTCTACAG +
Preference number: 6 (lower is better)
Translates to: LMHSPSLFLHFD*HNDLEIRSLLQ
Trigger: CTGTAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTCGAAATGGAGAAAAAGACTGGGAGAATGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp TACCAATGGAATGCAAGGCAGTTGCTTAAGCAATGTTaGCTCTTTCCGATAACGAGCTGGAACCAGTTTCCA +
Preference number: 6 (lower is better)
Translates to: YQWNARQLLKQC*LFPITSWNQFP
Trigger: TGGAAACTGGTTCCAGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS CAA 90 bp TGTCCCATCCTTCAACAAATTTTCTACCAATGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTCTTTCCGATAACGAGCTGGAACCAG +
Preference number: 6 (lower is better)
Translates to: CPILQQIFYQWNARQ*LKQCLLFPITSWNQ
Trigger: CTGGTTCCAGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAGGATGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000236925.8
CDS GCA 72 bp TTGGAGACTTTAGCCATTTGGCTTGAGGATTCTCCATaGTCTCTTTTATATCTGCCAGTGACTTGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: LETLAIWLEDSP*SLLYLPVTCSF
Trigger: AAAGGAGCAAGTCACTGGCAGATATAAAAGAGAGCATGGAGAATCCTCAAGCCAAATGGCTAAAGTCTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS GCA 72 bp CAACAAAGCTGCCCGTTTCATTGCCATATCATTTTCTaGTTTTTGATCATCCTGAGGCTGAAGAATGAGCCT +
Preference number: 6 (lower is better)
Translates to: QQSCPFHCHIIF*FLIILRLKNEP
Trigger: AGGCTCATTCTTCAGCCTCAGGATGATCAAAAAGCAGAAAATGATATGGCAATGAAACGGGCAGCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447701.2
CDS CCA 72 bp GCCATCTGTCCCATCCTTCAACAAATTTTCTACCAATaGAATGCAAGGCAGTTGCTTAAGCAATGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: AICPILQQIFYQ*NARQLLKQCLL
Trigger: GAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAGGATGGGACAGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000532732.1
CDS CCA 72 bp TGCCAAAGAAAGGCTAGAGACTGGAGGACCCTTTATTaGTGTTTTGGGGGATTCAATATGATCTCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: CQRKARDWRTLY*CFGGFNMISVN
Trigger: ATTCACAGAGATCATATTGAATCCCCCAAAACACCAATAAAGGGTCCTCCAGTCTCTAGCCTTTCTTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 90 bp TGTCCCATCCTTCAACAAATTTTCTACCAATGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTCTTTCCGATAACGAGCCTTTTGACC +
Preference number: 6 (lower is better)
Translates to: CPILQQIFYQWNARQ*LKQCLLFPITSLLT
Trigger: GGTCAAAAGGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAGGATGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp GGAGATCTCGTTCAGTTACCAATTTTTCCTGGTCAGTaGCATAAAGACCTTTCTGTGCTAAAGCCTGGATTA +
Preference number: 6 (lower is better)
Translates to: GDLVQLPIFPGQ*HKDLSVLKPGL
Trigger: TAATCCAGGCTTTAGCACAGAAAGGTCTTTATGTCACTGACCAGGAAAAATTGGTAACTGAACGAGATCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp TCAATAGGTGTAGTTGGAGACTTTAGCCATTTGGCTTaGGGATTCTCCATGCTCTCTTTTATATCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: SIGVVGDFSHLA*GFSMLSFISAS
Trigger: ACTGGCAGATATAAAAGAGAGCATGGAGAATCCTCAAGCCAAATGGCTAAAGTCTCCAACTACACCTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 72 bp TACTTACAGTACTTGGACAAGGACTCAAAGCTTCCCTaGTGTTGCCAGTTCGAATATCATAATCCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: YLQYLDKDSKLP*CCQFEYHNPEE
Trigger: TTCTTCAGGATTATGATATTCGAACTGGCAACACCAGGGAAGCTTTGAGTCCTTGTCCAAGTACTGTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp CTGTATATTCTGTTCCAGAAGCCACTGAAGAAGTTGTaGATGCATTCTCCCAGTCTTTTTCTCCATTTCGAC +
Preference number: 6 (lower is better)
Translates to: LYILFQKPLKKL*MHSPSLFLHFD
Trigger: GTCGAAATGGAGAAAAAGACTGGGAGAATGCATCAACAACTTCTTCAGTGGCTTCTGGAACAGAATATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 90 bp GAGCATATCTTCCAGAGTGAAATGGCAACACTGGTTCAAGTATTCTaGGCAAAATTCTTGAATCAGCTGCAGATTATACAGGCTATCAGC +
Preference number: 6 (lower is better)
Translates to: EHIFQSEMATLVQVF*AKFLNQLQIIQAIS
Trigger: GCTGATAGCCTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCATTTCACTCTGGAAGATATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000447701.2
ENST00000532732.1
CDS CAA 90 bp TGTCCCATCCTTCAACAAATTTTCTACCAATGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTCTTTCCGATAACGAGCCTACGATAT +
Preference number: 6 (lower is better)
Translates to: CPILQQIFYQWNARQ*LKQCLLFPITSLRY
Trigger: ATATCGTAGGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAGGATGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532732.1
CDS CAA 90 bp CAGAGTGAAATGGCAACACTGGTTCAAGTATTCTTGGCAAAATTCTaGAATCAGCTGCAGATTATACAGGCTATCAGCCAAAGACATAGT +
Preference number: 6 (lower is better)
Translates to: QSEMATLVQVFLAKF*NQLQIIQAISQRHS
Trigger: ACTATGTCTTTGGCTGATAGCCTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCATTTCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000447701.2
ENST00000532732.1
CDS TCA 72 bp TGGCAACACTGGTTCAAGTATTCTTGGCAAAATTCTTaGATCAGCTGCAGATTATACAGGCTATCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: WQHWFKYSWQNS*ISCRLYRLSAK
Trigger: TTTGGCTGATAGCCTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000447701.2
ENST00000532732.1
CDS TCA 72 bp GATTGTTGCTCTCTCATCTGCATTAACATCTCCTGCTaGAGTGACAAGCGTTGCATTTCTTGTTGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: DCCSLICINISC*SDKRCISCCRK
Trigger: TTTTCTACAACAAGAAATGCAACGCTTGTCACTTCAGCAGGAGATGTTAATGCAGATGAGAGAGCAACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp GTGATAGGACTTCAGAGACTGTTGACTCAAAAGGTTTaGTTTCCTTTTCTTCTGGATTATGTCCACGCTGTT +
Preference number: 6 (lower is better)
Translates to: VIGLQRLLTQKV*FPFLLDYVHAV
Trigger: AACAGCGTGGACATAATCCAGAAGAAAAGGAAATCAAACCTTTTGAGTCAACAGTCTCTGAAGTCCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 72 bp CGTGAATTCCAGTGTCTACTTCAGTATTGTCAGTTATaGGACTCAAGGCACCTTTCGTATCAGTTACATTAT +
Preference number: 6 (lower is better)
Translates to: REFQCLLQYCQL*DSRHLSYQLHY
Trigger: ATAATGTAACTGATACGAAAGGTGCCTTGAGTCCCATAACTGACAATACTGAAGTAGACACTGGAATTCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp CTTCAACAAATTTTCTACCAATGGAATGCAAGGCAGTaGCTTAAGCAATGTTTGCTCTTTCCGATAACGAGC +
Preference number: 6 (lower is better)
Translates to: LQQIFYQWNARQ*LKQCLLFPITS
Trigger: GCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000532732.1
CDS CAA 72 bp ATGGCAACACTGGTTCAAGTATTCTTGGCAAAATTCTaGAATCAGCTGCAGATTATACAGGCTATCAGCCAA +
Preference number: 6 (lower is better)
Translates to: MATLVQVFLAKF*NQLQIIQAISQ
Trigger: TTGGCTGATAGCCTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000447701.2
ENST00000532732.1
CDS CAA 72 bp TGGCATCCTGAATCCCGGAACAAGATTAAGAAGTTGTaGGCATCTGATTTCTCCATTTCCTCCAGTATTTTT +
Preference number: 6 (lower is better)
Translates to: WHPESRNKIKKL*ASDFSISSSIF
Trigger: AAAAATACTGGAGGAAATGGAGAAATCAGATGCCAACAACTTCTTAATCTTGTTCCGGGATTCAGGATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 90 bp AACTACTATCTAAGACATTTCTTTTGGCAGCATTCAAGACAGGAATaGAAGGCATATCTTTTACAGGTTCAGCTCCTTGTGGACGAACAA +
Preference number: 6 (lower is better)
Translates to: NYYLRHFFWQHSRQE*KAYLLQVQLLVDEQ
Trigger: TTGTTCGTCCACAAGGAGCTGAACCTGTAAAAGATATGCCTTCAATTCCTGTCTTGAATGCTGCCAAAAGAAATGTCTTAGATAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000447701.2
CDS TCA 72 bp CGAAGAATCTTCGTCCATAGTTTCAGGAATATCTTCTaGAGGAACGTGAATTCCAGTGTCTACTTCAGTATT +
Preference number: 6 (lower is better)
Translates to: RRIFVHSFRNIF*RNVNSSVYFSI
Trigger: AATACTGAAGTAGACACTGGAATTCACGTTCCTTCAGAAGATATTCCTGAAACTATGGACGAAGATTCTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp TTTCTTCAGTTTCTGGGCAATAAGTGTATAAAGATCTaGACTGGCATCCTGAATCCCGGAACAAGATTAAGA +
Preference number: 6 (lower is better)
Translates to: FLQFLGNKCIKI*TGILNPGTRLR
Trigger: TCTTAATCTTGTTCCGGGATTCAGGATGCCAGTTCAGATCTTTATACACTTATTGCCCAGAAACTGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CAA 72 bp TTCCAGAGTGAAATGGCAACACTGGTTCAAGTATTCTaGGCAAAATTCTTGAATCAGCTGCAGATTATACAG +
Preference number: 6 (lower is better)
Translates to: FQSEMATLVQVF*AKFLNQLQIIQ
Trigger: CTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCATTTCACTCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
ENST00000447701.2
ENST00000532732.1
CDS CAA 90 bp AACCACATGAGGAATATTAAGTTCAGAGCCTTCTGGTGTAGTTTTTaGAGAACTGCTTCCACTACTTTTTCCATCGGTATGATTCAGTTT +
Preference number: 6 (lower is better)
Translates to: NHMRNIKFRAFWCSF*RTASTTFSIGMIQF
Trigger: AAACTGAATCATACCGATGGAAAAAGTAGTGGAAGCAGTTCTCAAAAAACTACACCAGAAGGCTCTGAACTTAATATTCCTCATGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp TTTGTGTTAAGGGGCACACAAGATTTGAGGTCACTGTaGGAATCTATATTAAGTTCTTCTTCAATGCTCTCT +
Preference number: 6 (lower is better)
Translates to: FVLRGTQDLRSL*ESILSSSSMLS
Trigger: AGAGAGCATTGAAGAAGAACTTAATATAGATTCTCACAGTGACCTCAAATCTTGTGTGCCCCTTAACACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS CCA 72 bp TCCTTCATTACTAATAGAACGAGTGATTCCTCGGTTTaGAGTGGATCTCTGTACACTATCTTCTTTATCAAA +
Preference number: 6 (lower is better)
Translates to: SFITNRTSDSSV*SGSLYTIFFIK
Trigger: TTTGATAAAGAAGATAGTGTACAGAGATCCACTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6
CDS TCA 72 bp ATTTGTAATGCTTCTTCAATGCTTGGTGTCTCGATCTaGTTGCCAAACTCGTCAAGAAGTATTCTATTTTGT +
Preference number: 6 (lower is better)
Translates to: ICNASSMLGVSI*LPNSSRSILFC
Trigger: ACAAAATAGAATACTTCTTGACGAGTTTGGCAATCAGATCGAGACACCAAGCATTGAAGAAGCATTACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236925.8
ENST00000358823.6
ENST00000413307.6