RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMSAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130559

Ensembl transcript IDs: ENST00000312405.10, ENST00000389532.9, ENST00000409386.3, ENST00000468150.1, ENST00000482664.5, ENST00000483991.5, ENST00000487868.1, ENST00000492174.1, ENST00000493088.1

Found 1051 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTaGTCAGCAGTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCA +
Preference number: 1 (lower is better)
Translates to: VARDLAVNTLRWEPQ*SAVATAVRATAKAA
Trigger: TGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCACTGCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR TCA 90 bp AGGAGAACTTCAAGTAAGGGAGCTCCGTGGCCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGTGGCCACAG +
Preference number: 1 (lower is better)
Translates to: RRTSSKGAPWPGTWL*TPSAGSLSGQQWPQ
Trigger: CTGTGGCCACTGCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACGGAGCTCCCTTACTTGAAGTTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR CCA 90 bp AGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTaGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGC +
Preference number: 1 (lower is better)
Translates to: SGSRIFRQLVSCSSV*QPWLARTCSWECPR
Trigger: GCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CCA 90 bp AGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTGGCAGCCATaGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAA +
Preference number: 1 (lower is better)
Translates to: RIFRQLVSCSSVWQP*LARTCSWECPRSTE
Trigger: TTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCGGAAGATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR GCA 90 bp AAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTaGAGCAGTGTCTGGCAGCCATGGCTGGCACGCACCTGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: KTNVSGSRIFRQLVS*SSVWQPWLARTCSW
Trigger: CCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CCA 90 bp CCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTaGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAG +
Preference number: 1 (lower is better)
Translates to: PAPGNVRAPQKHQHH*DQGRKNPKPSTYLE
Trigger: CTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CCA 90 bp AGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATaGAAAGCAGTCCATCTTTGGTGCACGCACACAGCCATGTGCACG +
Preference number: 1 (lower is better)
Translates to: RDCTAVTRAESQKDT*KAVHLWCTHTAMCT
Trigger: CGTGCACATGGCTGTGTGCGTGCACCAAAGATGGACTGCTTTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR TCA 90 bp GAGGTGAGAAGCAAGAAAGCAAAGTGGATCACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAGGGAGCTCCGTGGCCCGGGACCTGG +
Preference number: 1 (lower is better)
Translates to: EVRSKKAKWITSNLC*RRTSSKGAPWPGTW
Trigger: CCAGGTCCCGGGCCACGGAGCTCCCTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGTGATCCACTTTGCTTTCTTGCTTCTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR GCA 90 bp AGTTTGGGCCTGAAGTCTGCTAAGAGACTGCACCGCAGTGACACGTaGAGAAAGTCAAAAGGACACATGGAAAGCAGTCCATCTTTGGTG +
Preference number: 1 (lower is better)
Translates to: SLGLKSAKRLHRSDT*RKSKGHMESSPSLV
Trigger: CACCAAAGATGGACTGCTTTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGCAGACTTCAGGCCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR GCA 90 bp CACGCACACAGCCATGTGCACGCACACGTGTGGGTAGAACGTATCTaGACATACATGCGTAAAATAATGGGACTCACGCAAGTTTCATTT +
Preference number: 1 (lower is better)
Translates to: HAHSHVHAHVWVERI*TYMRKIMGLTQVSF
Trigger: AAATGAAACTTGCGTGAGTCCCATTATTTTACGCATGTATGTGCAGATACGTTCTACCCACACGTGTGCGTGCACATGGCTGTGTGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR TCA 90 bp GAAACTCCTATAAAGCAAGGAGTTGGTGTCGCCTGGTCAGCGAAATaGGCCACAGCAACCTCACACATACGATTCAATGTAAAGCAAATT +
Preference number: 1 (lower is better)
Translates to: ETPIKQGVGVAWSAK*ATATSHIRFNVKQI
Trigger: AATTTGCTTTACATTGAATCGTATGTGTGAGGTTGCTGTGGCTCATTTCGCTGACCAGGCGACACCAACTCCTTGCTTTATAGGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGTCTGGGTCACCCTTTaGACGCCAGCTGCACCGGGG +
Preference number: 2 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSVWVTL*TPAAPG
Trigger: CCCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGAC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCATCCTCACCCTGCCTaGCATCCTCTGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSHPHPA*HPLREM
Trigger: CATCTCACGCAGAGGATGCCAGGCAGGGTGAGGATG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR TCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: KRHAPLRACSASRCRIQTPGTWL*TPSAGS
Trigger: GCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEPGTWL*TPSAGS
Trigger: GCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCCCCGTGGCACCCTCTaGATGCCAGCCACAAGGGCA +
Preference number: 2 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKPRGTL*MPATRA
Trigger: TGCCCTTGTGGCTGGCATCCAGAGGGTGCCACGGGG...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR TCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACACATTCCCCACCCTCATaGCCGCGTGCCAGAAGTCAT +
Preference number: 2 (lower is better)
Translates to: WLARTCSWECPRSTEASTHSPPS*PRARSH
Trigger: ATGACTTCTGGCACGCGGTCATGAGGGTGGGGAATG...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAGTGGCACCCTCTGGATaGCAGCCACAAGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQVAPSG*QPQGHH
Trigger: ATGATGCCCTTGTGGCTGGCATCCAGAGGGTGCCAC...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGTCTGGGTCACCCTTTaGACGCCAGCTGCACCGGGG +
Preference number: 2 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKVWVTL*TPAAPG
Trigger: CCCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGAC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACATACAGCTGGCCAATATaGGGGTGTCAGGCAATGTGC +
Preference number: 2 (lower is better)
Translates to: WLARTCSWECPRSTEASTYSWPI*GCQAMC
Trigger: GCACATTGCCTGACACCCTCATATTGGCCAGCTGTA...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAAACGGCACGCTCCTCTaGGAGCATGCAGCGCTTCCA +
Preference number: 2 (lower is better)
Translates to: GMSALHRSINTIGTKAERNGTLL*EHAALP
Trigger: TGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTT...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAACCCTCATGACCGCGTaGCAGAAGTCATCATCTTCA +
Preference number: 2 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQTLMTA*QKSSSS
Trigger: TGAAGATGATGACTTCTGGCACGCGGTCATGAGGGT...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAATGGCTGGCACGCACCTaGTCCTGGGAATGTCCGCGC +
Preference number: 2 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMEWLART*SWECPR
Trigger: GCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR TCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTTTGCAAAAGGTCTGTaGCTTTGCACACTTCGTACC +
Preference number: 2 (lower is better)
Translates to: AVRATAKAASTPPSSPCLFAKGL*LCTLRT
Trigger: GGTACGAAGTGTGCAAAGTCACAGACCTTTTGCAAA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAATCCTCTGCGTGAGATaGGCGCTGAGAGAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRILCVR*ALREGF
Trigger: AAACCCCTCTCTCAGCGCTCATCTCACGCAGAGGAT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGTGGCACCCTCTGGATaGCAGCCACAAGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQVAPSG*QPQGHH
Trigger: ATGATGCCCTTGTGGCTGGCATCCAGAGGGTGCCAC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAGTGCGAGCCACTaGAAAAGCGGCATCTACTCC +
Preference number: 2 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRSSASH*KSGIYS
Trigger: GGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR GCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCGCTCCTCTGAGAGCATaGAGCGCTTCCAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: MSALHRSINTIGTKAERTAPLRA*SASRCR
Trigger: TCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGC...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CAA 90 bp ACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACACCATaGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGA +
Preference number: 2 (lower is better)
Translates to: TCSWECPRSTEASTP*GPRQKEPKAIHLLG
Trigger: TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGATACAGCTGGCCAATATaGGGGTGTCAGGCAATGTGC +
Preference number: 2 (lower is better)
Translates to: GMSALHRSINTIGTKAERYSWPI*GCQAMC
Trigger: GCACATTGCCTGACACCCTCATATTGGCCAGCTGTA...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCATCTGGCAGCCATGGCTaGCACGCACCTGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PIYRTESGCVEHDIYKIASGSHG*HAPAPG
Trigger: CCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGA...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CAA 90 bp CAGGGACGCTTCTGTCAATCATTAGGCGAACACTGGCCTGGGGACTaGGGACATCAGGAATGTCCATGCCACATTAGTGCTTACTCGCAA +
Preference number: 2 (lower is better)
Translates to: QGRFCQSLGEHWPGD*GHQECPCHISAYSQ
Trigger: TTGCGAGTAAGCACTAATGTGGCATGGACATTCCTGATGTCCCAAGTCCCCAGGCCAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR TCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGTTTGCAAAAGGTCTGTaGCTTTGCACACTTCGTACC +
Preference number: 2 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKFAKGL*LCTLRT
Trigger: GGTACGAAGTGTGCAAAGTCACAGACCTTTTGCAAA...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR TCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKPGTWL*TPSAGS
Trigger: GCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAG +
Preference number: 2 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQTSNLC*RRTSSK
Trigger: CTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGT...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACCAAAACTTAATGAATaGTGGCTGCAGTTGGCTCGG +
Preference number: 2 (lower is better)
Translates to: KRHAPLRACSASRCRIQTPKLNE*WLQLAR
Trigger: CCGAGCCAACTGCAGCCATCATTCATTAAGTTTTGG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTTCTGGCAGCCATGGCTaGCACGCACCTGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PERPKSTTTKINPVSETFSGSHG*HAPAPG
Trigger: CCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGA...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAAGTGTCTGGCAGCCATaGCTGGCACGCACCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRSVWQP*LARTCS
Trigger: GGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACT...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAATCCTCTGCGTGAGATaGGCGCTGAGAGAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGILCVR*ALREGF
Trigger: AAACCCCTCTCTCAGCGCTCATCTCACGCAGAGGAT...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCACGGCAGCTGGTCAGTTaGAGCAGTGTCTGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PIYRTESGCVEHDIYKIARQLVS*SSVWQP
Trigger: TGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCG...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCATCCTCACCCTGCCTaGCATCCTCTGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCHPHPA*HPLREM
Trigger: CATCTCACGCAGAGGATGCCAGGCAGGGTGAGGATG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR CCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTGCACGCACCTGCTCCTaGGAATGTCCGCGCTCCACA +
Preference number: 2 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLARTCS*ECPRST
Trigger: TGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGC...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCAGTGGCCACAGCAGTaGGAGCCACTGCAAAAGCGG +
Preference number: 2 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEQWPQQ*EPLQKR
Trigger: CCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCACTG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAAGTTGCAGCAGTGTCTaGCAGCCATGGCTGGCACGC +
Preference number: 2 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQSCSSV*QPWLAR
Trigger: GCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACT...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATCCTCTGCGTGAGATaGGCGCTGAGAGAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAILCVR*ALREGF
Trigger: AAACCCCTCTCTCAGCGCTCATCTCACGCAGAGGAT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp TGTCCAAGCATGAAGAACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTGAGACAGGACAAGCCGTaGCCTAACAAAACCACTGAA +
Preference number: 2 (lower is better)
Translates to: CPSMKNAGTLLSIIRRTLRQDKP*PNKTTE
Trigger: TTCAGTGGTTTTGTTAGGTCACGGCTTGTCCTGTCT...CAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGTTCTTCATGCTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR TCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACAGCCTGGTCAGCGAAATaGGCCACAGCAACCTCACAC +
Preference number: 2 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTAWSAK*ATATSH
Trigger: GTGTGAGGTTGCTGTGGCTCATTTCGCTGACCAGGC...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR GCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTGTGGCACCCTCTGGATaGCAGCCACAAGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLVAPSG*QPQGHH
Trigger: ATGATGCCCTTGTGGCTGGCATCCAGAGGGTGCCAC...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCAGTGGCCACAGCAGTaGGAGCCACTGCAAAAGCGG +
Preference number: 2 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSQWPQQ*EPLQKR
Trigger: CCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCACTG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCCATCCTCACCCTGCCTaGCATCCTCTGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: TPKKICAKLMLVAPESSGHPHPA*HPLREM
Trigger: CATCTCACGCAGAGGATGCCAGGCAGGGTGAGGATG...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAAATGATGGCTGCAGTTaGCTCGGCTTGCCTACTTTA +
Preference number: 2 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGNDGCS*LGLPTL
Trigger: TAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATT...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCAGAATCTTCCGGCAGCTaGTCAGTTGCAGCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: DSFHGENPELIQTSHGNAESSGS*SVAAVS
Trigger: AGACACTGCTGCAACTGACCAGCTGCCGGAAGATTC...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR GCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAATTAATGAATGATGGCTaGAGTTGGCTCGGCTTGCCT +
Preference number: 2 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKLMNDG*SWLGLP
Trigger: AGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAA...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAAGCAGTGCGAGCCACTaGAAAAGCGGCATCTACTCC +
Preference number: 2 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKSSASH*KSGIYS
Trigger: GGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCT...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAACCCTCATGACCGCGTaGCAGAAGTCATCATCTTCA +
Preference number: 2 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTTLMTA*QKSSSS
Trigger: TGAAGATGATGACTTCTGGCACGCGGTCATGAGGGT...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGATTAATGAATGATGGCTaGAGTTGGCTCGGCTTGCCT +
Preference number: 2 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRLMNDG*SWLGLP
Trigger: AGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAA...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCATCATTTACGAGTCTaGGTCACCCTTTGGACGCCA +
Preference number: 2 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEHHLRV*VTLWTP
Trigger: TGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCATCATTTACGAGTCTaGGTCACCCTTTGGACGCCA +
Preference number: 2 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSHHLRV*VTLWTP
Trigger: TGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAAGCATCAACACCATTaGGACCAAGGCAGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAKHQHH*DQGRKN
Trigger: GTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAAGCAAGAAAGCAAAGTaGATCACGTCTAATCTATGC +
Preference number: 2 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRSKKAK*ITSNLC
Trigger: GCATAGATTAGACGTGATCCACTTTGCTTTCTTGCT...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGCCATCCACTTACTTaGAGTTCTGAAATAACTGCA +
Preference number: 2 (lower is better)
Translates to: PIYRTESGCVEHDIYKIASHPLT*SSEITA
Trigger: TGCAGTTATTTCAGAACTCCAAGTAAGTGGATGGCT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CAA 90 bp AAGTATGGTAACAGAAAGCTCACTCAGGACTGTGTAACTCAGCACTaGAGAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGA +
Preference number: 2 (lower is better)
Translates to: KYGNRKLTQDCVTQH*RNHTAFSSLFTGQR
Trigger: TCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTCTCAAGTGCTGAGTTACACAGTCCTGAGTGAGCTTTCTGTTACCATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR TCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAG +
Preference number: 2 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQTSNLC*RRTSSK
Trigger: CTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGT...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAAGCAAGAAAGCAAAGTaGATCACGTCTAATCTATGC +
Preference number: 2 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQSKKAK*ITSNLC
Trigger: GCATAGATTAGACGTGATCCACTTTGCTTTCTTGCT...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR GCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCATCAGGAATGTCCATaGCACATTAGTGCTTACTCG +
Preference number: 2 (lower is better)
Translates to: LNNKVRILRHNESCASFPHQECP*HISAYS
Trigger: CGAGTAAGCACTAATGTGGCATGGACATTCCTGATG...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR CAA 90 bp GCTGAAAGAAATTTGCAACGAGACACAAATACCACTGCAGGGGCTTaGAATATAGGAGACATTGATAAACAGAGTTATAAGTCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: AERNLQRDTNTTAGA*NIGDIDKQSYKSVL
Trigger: TAACACTGACTTATAACTCTGTTTATCAATGTCTCCTATATTCAAAGCCCCTGCAGTGGTATTTGTGTCTCGTTGCAAATTTCTTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CAA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAAGTCTGGGTCACCCTTaGGACGCCAGCTGCACCGGG +
Preference number: 3 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESLGHP*DASCTG
Trigger: CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR GCA 72 bp GTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTaGAGCAGTGTCTGGCAGCCATGGCTGGCACGCACC +
Preference number: 3 (lower is better)
Translates to: VSGSRIFRQLVS*SSVWQPWLART
Trigger: GGTGCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CCA 72 bp AGTGTCTGGCAGCCATGGCTGGCACGCACCTGCTCCTaGGAATGTCCGCGCTCCACAGAAGCATCAACACCA +
Preference number: 3 (lower is better)
Translates to: SVWQPWLARTCS*ECPRSTEASTP
Trigger: TGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CCA 72 bp AGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTaGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: RIFRQLVSCSSV*QPWLARTCSWE
Trigger: TTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCGGAAGATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGTCTGGGTCACCCTTaGGACGCCAGCTGCACCGGG +
Preference number: 3 (lower is better)
Translates to: GQYEGVRQCARGRGEKQESLGHP*DASCTG
Trigger: CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR CCA 72 bp ACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTaGCCTGGGGACTTGGGACATCAGGAATGTCCATGC +
Preference number: 3 (lower is better)
Translates to: TQGRFCQSLGEH*PGDLGHQECPC
Trigger: GCATGGACATTCCTGATGTCCCAAGTCCCCAGGCCAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CAA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAAGTCTGGGTCACCCTTaGGACGCCAGCTGCACCGGG +
Preference number: 3 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKSLGHP*DASCTG
Trigger: CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR CCA 72 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTaGGACCAAGGCAGAAAGAACCCAAAGCCATCCACT +
Preference number: 3 (lower is better)
Translates to: GNVRAPQKHQHH*DQGRKNPKPST
Trigger: AGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CAA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAAAAAGGTCTGTGACTTaGCACACTTCGTACCCAAAT +
Preference number: 3 (lower is better)
Translates to: WLARTCSWECPRSTEASTKRSVT*HTSYPN
Trigger: ATTTGGGTACGAAGTGTGCAAAGTCACAGACCTTTT...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR TCA 72 bp AAAGTATCCATCTACAGGGGAAACGGCACGCTCCTCTaGGAGCATGCAGCGCTTCCAGATGCAGAATCCAGA +
Preference number: 3 (lower is better)
Translates to: KVSIYRGNGTLL*EHAALPDAESR
Trigger: TCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTTCCCCTGTAGATGGATACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR GCA 72 bp CACTGGCCTGGGGACTTGGGACATCAGGAATGTCCATaGCACATTAGTGCTTACTCGCAACGAACAGTGAAA +
Preference number: 3 (lower is better)
Translates to: HWPGDLGHQECP*HISAYSQRTVK
Trigger: TTTCACTGTTCGTTGCGAGTAAGCACTAATGTGGCATGGACATTCCTGATGTCCCAAGTCCCCAGGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CAA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAAAAGGTCTGTGACTTaGCACACTTCGTACCCAAAT +
Preference number: 3 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRKRSVT*HTSYPN
Trigger: ATTTGGGTACGAAGTGTGCAAAGTCACAGACCTTTT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR CAA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATGTCTAGAAACCTCTTaGCAAAAGGTCTGTGACTTT +
Preference number: 3 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPECLETS*QKVCDF
Trigger: AAAGTCACAGACCTTTTGCAAAGAGGTTTCTAGACA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR-3UTR CAA 90 bp TGTCCAAGCATGAAGAACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTGTGCAGTTGGCTCGGCTaGCCTACTTTAAATGAGGCA +
Preference number: 3 (lower is better)
Translates to: CPSMKNAGTLLSIIRRTLCSWLG*PTLNEA
Trigger: TGCCTCATTTAAAGTAGGCAAGCCGAGCCAACTGCA...CAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGTTCTTCATGCTTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR GCA 72 bp CTGAAGTCTGCTAAGAGACTGCACCGCAGTGACACGTaGAGAAAGTCAAAAGGACACATGGAAAGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: LKSAKRLHRSDT*RKSKGHMESSP
Trigger: TGGACTGCTTTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGCAGACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CAA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTTGTCTAGAAACCTCTTaGCAAAAGGTCTGTGACTTT +
Preference number: 3 (lower is better)
Translates to: EITAGQYEGVRQCARGRGCLETS*QKVCDF
Trigger: AAAGTCACAGACCTTTTGCAAAGAGGTTTCTAGACA...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR TCA 72 bp AGCAAGAAAGCAAAGTGGATCACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAGGGAGCTCCGTGGCCC +
Preference number: 3 (lower is better)
Translates to: SKKAKWITSNLC*RRTSSKGAPWP
Trigger: GGGCCACGGAGCTCCCTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGTGATCCACTTTGCTTTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
3UTR GCA 72 bp AGCCATGTGCACGCACACGTGTGGGTAGAACGTATCTaGACATACATGCGTAAAATAATGGGACTCACGCAA +
Preference number: 3 (lower is better)
Translates to: SHVHAHVWVERI*TYMRKIMGLTQ
Trigger: TTGCGTGAGTCCCATTATTTTACGCATGTATGTGCAGATACGTTCTACCCACACGTGTGCGTGCACATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CAA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCACCCCAAGCCAAGATaGAGCCTCAGTCCCATAGTC +
Preference number: 3 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLHPKPR*SLSPIV
Trigger: GACTATGGGACTGAGGCTCAATCTTGGCTTGGGGTG...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CAA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCATGCAGTTGGCTCGGCTaGCCTACTTTAAATGAGGCA +
Preference number: 3 (lower is better)
Translates to: PIYRTESGCVEHDIYKIACSWLG*PTLNEA
Trigger: TGCCTCATTTAAAGTAGGCAAGCCGAGCCAACTGCA...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR TCA 72 bp ATAAAGCAAGGAGTTGGTGTCGCCTGGTCAGCGAAATaGGCCACAGCAACCTCACACATACGATTCAATGTA +
Preference number: 3 (lower is better)
Translates to: IKQGVGVAWSAK*ATATSHIRFNV
Trigger: TACATTGAATCGTATGTGTGAGGTTGCTGTGGCTCATTTCGCTGACCAGGCGACACCAACTCCTTGCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR-3UTR CAA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCGGAAGACAGGCTTaGCAGATTTCGGTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: TPKKICAKLMLVAPESSGSGRQA*QISVLL
Trigger: TAAAAGCACCGAAATCTGCAAAGCCTGTCTTCCGCT...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CAA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTGGAGAAAATCCAGAATaGATTCAGACGTCCCATGGG +
Preference number: 3 (lower is better)
Translates to: PERPKSTTTKINPVSETFGENPE*IQTSHG
Trigger: CCCATGGGACGTCTGAATCAATTCTGGATTTTCTCC...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR TCA 72 bp CACACACTGACTCATTCCATGGAGAAAATCCAGAATTaGTTCAGACGTCCCATGGGAATGCAATTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: HTLTHSMEKIQN*FRRPMGMQFSS
Trigger: GCTGGAAAATTGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTCAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR CCA 72 bp AGCACTACCCAAAACTTAATGAATGATGGCTGCAGTTaGCTCGGCTTGCCTACTTTAAATGAGGCAAACATC +
Preference number: 3 (lower is better)
Translates to: STTQNLMNDGCS*LGLPTLNEANI
Trigger: GATGTTTGCCTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTGGGTAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR TCA 72 bp AACAAACCATTAGAGCACTACCCAAAACTTAATGAATaGTGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAA +
Preference number: 3 (lower is better)
Translates to: NKPLEHYPKLNE*WLQLARLAYFK
Trigger: TTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTGGGTAGTGCTCTAATGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
3UTR-3UTR CAA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTTGTCTAGAAACCTCTTaGCAAAAGGTCTGTGACTTT +
Preference number: 3 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLCLETS*QKVCDF
Trigger: AAAGTCACAGACCTTTTGCAAAGAGGTTTCTAGACA...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSPGTWL*TPSAGS
Trigger: GCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCCCGGGGTGAGGCCCTaGGGAACTCCGGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSPGVRP*GTPGQP
Trigger: AGGCTGACCCGGAGTTCCCCAGGGCCTCACCCCGGG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGGGCCTCCTCGGCCTTaGGCTGCTGCTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSGPPRP*AAASGG
Trigger: TCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCGTGGCCGTGGGGTGTaGCTGGTTCTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSRGRGV*LVLWGQ
Trigger: CTGACCCCACAGAACCAGCCACACCCCACGGCCACG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGTGGTCCTGTCTCGGTaGGGTCGATGCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSVVLSR*GRCPWG
Trigger: TCCCCATGGGCATCGACCCCACCGAGACAGGACCAC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAACTCCGGGTCAGCCTaGTGGGGAACCACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSNSGSA*WGTTSA
Trigger: AGCAGACGTGGTTCCCCAGCAGGCTGACCCGGAGTT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTGGAGGAGCACTTGGTaGCGGAGTCGCTGCACGACT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSWRSTW*RSRCTT
Trigger: AGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCTGTGGCCTGTCTTTTaGGACCTTCAGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLWPVF*DLQLRR
Trigger: CCGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACACCAGGCCAGGGTCCGTaGGCGTCCGAGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTPGQGP*ASEGGC
Trigger: GCAGCCACCCTCGGACGCCCACGGACCCTGGCCTGG...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGAGGTCCACTTCAATaGGGCTGGCCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSRGPLQ*GWPCSS
Trigger: TGAGGAGCAGGGCCAGCCTCATTGAAGTGGACCTCT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGCAGTAAAGCGCCCTaGACTGGCAGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSSKAP*TGSQHH
Trigger: GTGATGCTGGCTGCCAGTTCAGGGCGCTTTACTGCT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTCTGGGAGCTGCTGGTaGTGGACTTGGTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSGSCW*WTWSHS
Trigger: GCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAGCGGGATCCTTGCCATaGTGGCTCGGACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRAGSLP*WLGLCS
Trigger: GGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGC...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCGCTTCTCCTCCAGCTaGATGTGCAGCTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSRFSSS*MCSCTS
Trigger: GCTGGTACAGCTGCACATGCAGCTGGAGGAGAAGCG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAGGCCTTCTTTGGCACTaGAGGCCGCTTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRGLLWH*RPLGLP
Trigger: TGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCC...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTTGGCGCAGATCCACTaGAGGTTGGCGGCGATCTTG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLAQIH*RLAAIL
Trigger: CAAGATCGCCGCCAACCTGCAGTGGATCTGCGCCAA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTGCGTTTGGTCGCGTTaGAGATCGGTACAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSCVWSR*RSVQEA
Trigger: GGCCTCCTGTACCGATCTCCAACGCGACCAAACGCA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGTGTCCAGCTGTCCTTaGGGAGACCGGGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSVSSCP*GDRAFA
Trigger: AGCAAATGCCCGGTCTCCCCAAGGACAGCTGGACAC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCTCCGGCCTGAGGGGTaGGGCAGCCTCGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGLRPEG*GSLGLA
Trigger: GGCAAGGCCGAGGCTGCCCCACCCCTCAGGCCGGAG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCCAGGCCAGGGTCCGTaGGCGTCCGAGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGPGQGP*ASEGGC
Trigger: GCAGCCACCCTCGGACGCCCACGGACCCTGGCCTGG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAGGACAGGCTGGAGCCTaGCTGAGTCCGGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRGQAGA*LSPAQV
Trigger: AACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCC...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCTGCAGACAAAGGGCTaGGGCGGCGGCCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKLQTKG*GGGPAA
Trigger: TGCGGCCGGGCCGCCGCCTCAGCCCTTTGTCTGCAG...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGCAGTGCGAGCCACTaGAAAAGCGGCATCTACTCC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSSASH*KSGIYS
Trigger: GGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGGCCGGCTGCTCTTCTaGTGTAACACTGTTTTCGCG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSGRLLF*CNTVFA
Trigger: CGCGAAAACAGTGTTACACCAGAAGAGCAGCCGGCC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTCCTCTCCGCAAAGCTaGTCATCTTCACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSSPQS*SSSRSH
Trigger: GTGGGAGCGTGAAGATGACCAGCTTTGCGGAGAGGA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCTGGCACTGGGACTGTaGGGGACTTCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLALGL*GTSSEA
Trigger: AGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCCAG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCCGACCCCCGGCTTCTaGTCGCCTTCGCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLPTPGF*SPSLTR
Trigger: CCTTGTCAGCGAAGGCGACCAGAAGCCGGGGGTCGG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTCAAGTTATCAGGGGTaGAGGAGCACTTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSSYQG*RSTWCR
Trigger: CCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCCCCGTGGCACCCTCTaGATGCCAGCCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLPRGTL*MPATRA
Trigger: TGCCCTTGTGGCTGGCATCCAGAGGGTGCCACGGGG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTCCTCCCCGTTGTGCTaGGAGTACTCCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSSPLC*EYSFAK
Trigger: CTTTGCAAAGGAGTACTCTCAGCACAACGGGGAGGA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGCTGCTCTTGCTGCTaGGAGATTTTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSCSCC*EIFRMA
Trigger: GGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCTGGTCGCCTTCGCTaGCAAGGTCCGCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSGRLR*QGPPSH
Trigger: ATGGCTCGGCGGACCTTGTCAGCGAAGGCGACCAGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTTGGCCCCGTGCCAGTaGGTTTGTAGATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLAPCQ*VCRFPQ
Trigger: CTGAGGAAATCTACAAACTCACTGGCACGGGGCCAA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGACGCTTCTCCTCCAGCTaGATGTGCAGCTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRRFSSS*MCSCTS
Trigger: GCTGGTACAGCTGCACATGCAGCTGGAGGAGAAGCG...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCCGAGCTTCAGGCGCTaGCTTGCCGACAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGPSFRR*LADSAS
Trigger: GGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGCTCGG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAGGGAAGGGTCTCAAGTaGGGGAGCGTCTCTACACTG +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRGKGLK*GSVSTL
Trigger: CAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCC...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATGGCTGGCACGCACCTaGTCCTGGGAATGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSWLART*SWECPR
Trigger: GCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAAGGAGGCTCTTCCCGTaGCTCTTCGTGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSRRLFP*LFVAVG
Trigger: CCCCACGGCCACGAAGAGCCACGGGAAGAGCCTCCT...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCAGCTGTTGAGTCTCTaGAGCTTCCTCTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSQLLSL*SFLSAK
Trigger: CTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCGTCGTCAGAGGGGCTaGGCAGCTCTCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLRRQRG*AALRRI
Trigger: GATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCTCCACGAAGTGGACTaGTGCCTTCACTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLHEVD*CLHFVV
Trigger: GACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTGCCACAGGTGGTTGTaGATTGTGAGTGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSCHRWL*IVSAST
Trigger: TGTGGACGCACTCACAATCCACAACCACCTGTGGCA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGCACTGCAGGCCGCTTaGGCTGCCACAGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLALQAA*AATGGC
Trigger: ACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGCACGCACCTGCTCCTaGGAATGTCCGCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLARTCS*ECPRST
Trigger: TGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACAGCGGCTGAGGCGGTaGCCAAGGAGCGGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRQRLRR*PRSGSA
Trigger: CGCGCTCCCGCTCCTTGGCCACCGCCTCAGCCGCTG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGGGTTGGCGGCGATCTTaGCGCGCGCCGCGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKGWRRS*RAPRRS
Trigger: GCTACGACGCGGCGCGCGCCAAGATCGCCGCCAACC...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGAGAGTCCACGGCTCTaGATCGTGGGAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLESPRL*IVGVGA
Trigger: AGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAGGTGTGCCCCCGGAATaGACGCTCTCGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSGVPPE*TLSGSV
Trigger: GACAGAACCCGAGAGCGTTCATTCCGGGGGCACACC...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGATGCTGTGTCCAAGCATaGAGAACGCAGGGACGCTTC +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRCCVQA*RTQGRF
Trigger: GAAGCGTCCCTGCGTTCTTCATGCTTGGACACAGCA...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCGCTGGCTTAAGAACTaGTGGCATCAAAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSRWLKN*WHQRLQ
Trigger: TTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCAGCG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTGTCTTCATCGGCCCTaGCTACATGAAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSCLHRP*LHEGRS
Trigger: GCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGACCTCCGCTTCCAGCTaGTGCTTGCGCACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKTSASS*CLRTRA
Trigger: GGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAATGGTGCCGGAGTCGCTaGACGACTCTTCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQWCRSR*TTLPGA
Trigger: TGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCA...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTGGAGGAGCACTTGGTaGCGGAGTCGCTGCACGACT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLWRSTW*RSRCTT
Trigger: AGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCACCGCAGTGACACGTaGAGAAAGTCAAAAGGACAC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSHRSDT*RKSKGH
Trigger: GTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGGATCCTTGCCATGCTaGCTCGGACTCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLGSLPC*LGLCSL
Trigger: GAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACTCCGGCCTGAGGGGTaGGGCAGCCTCGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQLRPEG*GSLGLA
Trigger: GGCAAGGCCGAGGCTGCCCCACCCCTCAGGCCGGAG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACTCCGGCCTGAGGGGTaGGGCAGCCTCGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQLRPEG*GSLGLA
Trigger: GGCAAGGCCGAGGCTGCCCCACCCCTCAGGCCGGAG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCATGTGGGTCACCACTaGGCTCCAGGGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLHVGHH*APGHCP
Trigger: TGGACAGTGCCCTGGAGCCCAGTGGTGACCCACATG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAGCACTGCAGGCCGCTTaGGCTGCCACAGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSALQAA*AATGGC
Trigger: ACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGC...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAATCGATTCCACTCGCTaGGAGGGTGTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQIDSTR*EGVPPE
Trigger: TTCCGGGGGCACACCCTCTCAGCGAGTGGAATCGAT...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCTGGGAGCTGCTGGTaGTGGACTTGGTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSGSCW*WTWSHS
Trigger: GCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACTGTACCAGCTCAGATaGCAGGAGGCTGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQLYQLR*QEAGGI
Trigger: GATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAG...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGATCCTCCAGCTGCATGTaGAGCTGTACCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRSSSCM*SCTSSD
Trigger: ATCTGAGCTGGTACAGCTGCACATGCAGCTGGAGGA...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTACTCCTTTGCAAAGTaGTCCGGCCTGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLYSFAK*SGLRGG
Trigger: CCCACCCCTCAGGCCGGAGCACTTTGCAAAGGAGTA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTCCTCGGCCTTGCGCTaGTGCTTCAGGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSSALR*CFRRKA
Trigger: GGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAACCTCCGCTTCCAGCTaGTGCTTGCGCACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRTSASS*CLRTRA
Trigger: GGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTGCTCCTCTAGGATCTaGTGCTGCTTCCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLCSSRI*CCFLRR
Trigger: CCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGAGCA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACTCGCTGAGAGGGTGTaGCCCCGGAATGAACGCTCT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSLAERV*PRNERS
Trigger: AGAGCGTTCATTCCGGGGGCACACCCTCTCAGCGAG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACACGGCAGCTGGTCAGTTaGAGCAGTGTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTRQLVS*SSVWQP
Trigger: TGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCG...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATCCGGGTCAGCCTGCTaGGGAACCACGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSSGSAC*GTTSAL
Trigger: TAGAGCAGACGTGGTTCCCCAGCAGGCTGACCCGGA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACCCGGGGTGAGGCCCTaGGGAACTCCGGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQPGVRP*GTPGQP
Trigger: AGGCTGACCCGGAGTTCCCCAGGGCCTCACCCCGGG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGTGTCCAGCTGTCCTTaGGGAGACCGGGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLVSSCP*GDRAFA
Trigger: AGCAAATGCCCGGTCTCCCCAAGGACAGCTGGACAC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCGTCGTCAGAGGGGCTaGGCAGCTCTCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGRRQRG*AALRRI
Trigger: GATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGTGGCTCCACGAAGTaGACTGGTGCCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRSGSTK*TGAFTL
Trigger: CAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACT...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCGGGAGGAGCCCTGTaGCCTGTCTTTTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSGGAL*PVFWDL
Trigger: AAGGTCCCAAAAGACAGGCCACAGGGCTCCTCCCGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACATGTGGGTCACCACTaGGCTCCAGGGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQHVGHH*APGHCP
Trigger: TGGACAGTGCCCTGGAGCCCAGTGGTGACCCACATG...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGTCTGGGTCACCCTTTaGACGCCAGCTGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEVWVTL*TPAAPG
Trigger: CCCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGAC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAGATGGGCCTCACCCATaGAATCGTGCTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSDGPHP*NRARLP
Trigger: AGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATC...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACATTCCCCACCCTCATaGCCGCGTGCCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSHSPPS*PRARSH
Trigger: ATGACTTCTGGCACGCGGTCATGAGGGTGGGGAATG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGGATGTTCCACACACTaGCTCATTCCATGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSGCSTH*LIPWRK
Trigger: TTTTCTCCATGGAATGAGTCAGTGTGTGGAACATCC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTCATCTGAGAGGCTGTaGTCAGGCAGGGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSSERL*SGRGSS
Trigger: GCTCGAGCCCCTGCCTGAGCACAGCCTCTCAGATGA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCGCCATGGAGACACTaGTCATCTGAGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSPWRH*SSERLC
Trigger: GCACAGCCTCTCAGATGAGCAGTGTCTCCATGGCGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGGCTGGCGGGATCCTTaGCATGCTGGCTCGGACTCT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEGWRDP*HAGSDS
Trigger: AGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACCGAGCTTCAGGCGCTaGCTTGCCGACAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQPSFRR*LADSAS
Trigger: GGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGCTCGG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTTCGGCCTTGCGCTGCTaGTTCAGGAGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGSALRC*FRRKAA
Trigger: GGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGA...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGGGCCTCCTCGGCCTTaGGCTGCTGCTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRGPPRP*AAASGG
Trigger: TCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATGGTGCCGGAGTCGCTaGACGACTCTTCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEWCRSR*TTLPGA
Trigger: TGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGGGCCTTCTTTGGCACTaGAGGCCGCTTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKGLLWH*RPLGLP
Trigger: TGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCC...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTCCACCATTGCCATGTaGGCACTCATTTTTATGGGT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSTIAM*ALIFMG
Trigger: ACCCATAAAAATGAGTGCCCACATGGCAATGGTGGA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTGCTGTCGCCAGAGCTaGGATCCACTTCACAACTCG +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLCCRQS*DPLHNS
Trigger: CGAGTTGTGAAGTGGATCCCAGCTCTGGCGACAGCA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGGCTCTTCGTGGCCGTaGGGTGTGGCTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEGSSWP*GVAGSV
Trigger: CACAGAACCAGCCACACCCCACGGCCACGAAGAGCC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACAAGGAGGCTCTTCCCGTaGCTCTTCGTGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTRRLFP*LFVAVG
Trigger: CCCCACGGCCACGAAGAGCCACGGGAAGAGCCTCCT...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAGTGTCCAGCTGTCCTTaGGGAGACCGGGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTVSSCP*GDRAFA
Trigger: AGCAAATGCCCGGTCTCCCCAAGGACAGCTGGACAC...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACTTCGTACCAAAGGCTaGGGGCCCTCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRLRTKG*GPSLGL
Trigger: GAGGCCCAGCGAGGGCCCCCAGCCTTTGGTACGAAG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTCCGTGGATGGTCCCTaGGGGAACGGATCGAATCCG +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSVDGP*GNGSNP
Trigger: CGGATTCGATCCGTTCCCCCAGGGACCATCCACGGA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAGGCTCGAGCGGCCGCTaGCGTCATCTTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSGSSGR*RHLCLH
Trigger: ATGAAGACAAAGATGACGCCAGCGGCCGCTCGAGCC...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGCCCGTGGGAGAGAGTaGCTCCACGAAGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEARGRE*LHEVDW
Trigger: CCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGGCCAGCCACGCCCGTaGGAGAGAGTGGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKGQPRP*ERVAPR
Trigger: TCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGCC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTCCGAGGGTGGCTGCTaGCAGGGAAGGGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSEGGC*QGRVSS
Trigger: ACTTGAGACCCTTCCCTGCCAGCAGCCACCCTCGGA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACCGACCCCCGGCTTCTaGTCGCCTTCGCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRPTPGF*SPSLTR
Trigger: CCTTGTCAGCGAAGGCGACCAGAAGCCGGGGGTCGG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAGGCCAAGGACAGGCTaGAGCCTGACTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKRPRTG*SLTESG
Trigger: GCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGTCTGTGCTCCTGCTTaGGTTACGGCTCAGTATGGG +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLVCAPA*VTAQYG
Trigger: CCCATACTGAGCCGTAACCCAAGCAGGAGCACAGAC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACAGTCTGGGTCACCCTTTaGACGCCAGCTGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTVWVTL*TPAAPG
Trigger: CCCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGAC...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACCCCGTGGCACCCTCTaGATGCCAGCCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEPRGTL*MPATRA
Trigger: TGCCCTTGTGGCTGGCATCCAGAGGGTGCCACGGGG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGATCACAACTCGCAGCGTaGTGTAGAGCAAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRSQLAA*CRAKGV
Trigger: AACACCTTTTGCTCTACATCACGCTGCGAGTTGTGA...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGAGCTGCTCTTGCTGCTaGGAGATTTTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSCSCC*EIFRMA
Trigger: GGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCT...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGGGCTTCGTCACGCTTaGGCTCCACCTCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGGLRHA*APPPLP
Trigger: TGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGGGCTTCGTCACGCTTaGGCTCCACCTCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEGLRHA*APPPLP
Trigger: TGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAAGGCTGGAGCCTGACTaGGTCCGGCTCAAGTTATCA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQRLEPD*VRLKLS
Trigger: TGATAACTTGAGCCGGACTCAGTCAGGCTCCAGCCT...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAATCGATTCCACTCGCTaGGAGGGTGTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEIDSTR*EGVPPE
Trigger: TTCCGGGGGCACACCCTCTCAGCGAGTGGAATCGAT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATGTGTACTCGGCCACTaGGGCCAGGGAAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRCVLGH*GQGRCR
Trigger: GCGGCATCTTCCCTGGCCTCAGTGGCCGAGTACACA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATCATCTGAGAGGCTGTaGTCAGGCAGGGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESSERL*SGRGSS
Trigger: GCTCGAGCCCCTGCCTGAGCACAGCCTCTCAGATGA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCTCTGCTCCCTCTTCTaGCTCCACGTCGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKLCSLF*LHVVRG
Trigger: CCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAG...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTGTACCAGCTCAGATaGCAGGAGGCTGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELYQLR*QEAGGI
Trigger: GATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCCTCCAGCTGCATGTaGAGCTGTACCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSSSCM*SCTSSD
Trigger: ATCTGAGCTGGTACAGCTGCACATGCAGCTGGAGGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGCAGGAATGCAGCCTTaGCGAGCTTCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEAGMQP*RASGAA
Trigger: GGCAGCGCCTGAAGCTCGGCAAGGCTGCATTCCTGC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCGGCCTTGCGCTGCTaGTTCAGGAGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSALRC*FRRKAA
Trigger: GGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGTCCTCGGCCTTGCGCTaGTGCTTCAGGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKSSALR*CFRRKA
Trigger: GGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGA...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACTCCGCAGGTACTCCTaGTTGATGAGCTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQELRRYS*LMSSRR
Trigger: GCGGCGCGAGCTCATCAAGCAGGAGTACCTGCGGAG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATCTAGGATCTGCTGCTaGTTCCTCCGCAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSSRICC*FLRRYS
Trigger: GGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACCCAGTCTCGGTCTGTaGTCCTGCTTGGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEPSLGL*SCLGYG
Trigger: GCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGCAGGCCGCTTGGGCTaGCACAGGTGGTTGTGGATT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEAGRLG*HRWLWI
Trigger: AATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCCTTTGGACGCCAGCTaGACCGGGGTCATTTACGAG +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGPLDAS*TGVIYE
Trigger: CTCGTAAATGACCCCGGTGCAGCTGGCGTCCAAAGG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGACTGTCAGCTTAAGTaGATCACCTTTTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSDCQLK*ITFWDK
Trigger: TTTGTCCCAAAAGGTGATGCACTTAAGCTGACAGTC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTCGCGTCCACCATCTaGAGACAAAGGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELASTI*RQRAEA
Trigger: CGCCTCAGCCCTTTGTCTGCAGATGGTGGACGCGAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCTTCGTACCAAAGGCTaGGGGCCCTCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTLRTKG*GPSLGL
Trigger: GAGGCCCAGCGAGGGCCCCCAGCCTTTGGTACGAAG...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACTTCGTACCAAAGGCTaGGGGCCCTCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQLRTKG*GPSLGL
Trigger: GAGGCCCAGCGAGGGCCCCCAGCCTTTGGTACGAAG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCAGCTGTTGAGTCTCTaGAGCTTCCTCTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLQLLSL*SFLSAK
Trigger: CTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAGGCCGCCCGCTTCTTaGCGAGCTCATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKRPPAS*RAHLPL
Trigger: AAGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAAGGGTGGAGGAGCACTTaGTGCCGGAGTCGCTGCACG +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQGWRST*CRSRCT
Trigger: CGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCC...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATCAAGTTATCAGGGGTaGAGGAGCACTTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSSSYQG*RSTWCR
Trigger: CCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGGTTACGGCTCAGTATaGGCAGGGCTTCCATCGATT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLGYGSV*AGLPSI
Trigger: AATCGATGGAAGCCCTGCCCATACTGAGCCGTAACC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAAGTCTGGGCCTTCTTTaGCACTGCAGGCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESLGLL*HCRPLG
Trigger: CCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCTGGCAGCCATGGCTaGCACGCACCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSGSHG*HAPAPG
Trigger: CCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGATCCACTGCAGGTTaGCGGCGATCTTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQERSTAG*RRSWRA
Trigger: CGCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTAGATCCACTGCAGGTTaGCGGCGATCTTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGRSTAG*RRSWRA
Trigger: CGCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCT...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGCCTGGATGACAGACTaGTGTCCCTGTAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEAWMTD*CPCKAA
Trigger: GGCCGCCTTACAGGGACACCAGTCTGTCATCCAGGC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAGCCCATGGGGAATTCTaGGCATGGAATCGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTAHGEF*AWNRGK
Trigger: TTTACCCCGATTCCATGCTCAGAATTCCCCATGGGC...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATCCTGCGGTTTCCACTaGCAGTGGTCCTGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESCGFH*QWSCLG
Trigger: ACCGAGACAGGACCACTGTCAGTGGAAACCGCAGGA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCTGGTCGCCTTCGCTaGCAAGGTCCGCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSGRLR*QGPPSH
Trigger: ATGGCTCGGCGGACCTTGTCAGCGAAGGCGACCAGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCTCTGGTCGCCTTCGCTaGCAAGGTCCGCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTSGRLR*QGPPSH
Trigger: ATGGCTCGGCGGACCTTGTCAGCGAAGGCGACCAGA...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACTTTCTGTTCATCCTTaGAGAAGAAGCCGACCCCCG +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSLSVHP*RRSRPP
Trigger: CGGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGAGGCTGGAGCCTGACTaGGTCCGGCTCAAGTTATCA +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGRLEPD*VRLKLS
Trigger: TGATAACTTGAGCCGGACTCAGTCAGGCTCCAGCCT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTGGGATATGGCATTGTaGATAATCGGCTTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSWDMAL*IIGLFD
Trigger: ATCAAACAAGCCGATTATTCACAATGCCATATCCCA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACAAACGGCACGCTCCTCTaGGAGCATGCAGCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTNGTLL*EHAALP
Trigger: TGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTT...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGCATGCTGCGGGCGCTaGGCCCGAGCGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCACCGR*ARAEEV
Trigger: CACCTCCTCCGCTCGGGCTCAGCGCCCGCAGCATGC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCTGCAGACAAAGGGCTaGGGCGGCGGCCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCLQTKG*GGGPAA
Trigger: TGCGGCCGGGCCGCCGCCTCAGCCCTTTGTCTGCAG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGTCCCTGCAGCAGGGCTaGCTAGGAAACTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKSLQQG*LGNCVW
Trigger: CCAAACGCAGTTTCCTAGGCAGCCCTGCTGCAGGGA...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACTCCGGGTCAGCCTaGTGGGGAACCACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKNSGSA*WGTTSA
Trigger: AGCAGACGTGGTTCCCCAGCAGGCTGACCCGGAGTT...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATCTCGGTGGGGTCGATaGCCATGGGGAATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESRWGR*PWGILS
Trigger: GCTCAGAATTCCCCATGGGCATCGACCCCACCGAGA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAACCTTCATGTCCTCCTaGAGTTTGGCCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTTFMSS*SLADSS
Trigger: GGAAGAGTCGGCCAAACTGCAGGAGGACATGAAGGT...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCTCTGCTCCCTCTTCTaGCTCCACGTCGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGLCSLF*LHVVRG
Trigger: CCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGCGGGATCCTTGCCATaGTGGCTCGGACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKAGSLP*WLGLCS
Trigger: GGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCGCAGGAATGCAGCCTTaGCGAGCTTCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTAGMQP*RASGAA
Trigger: GGCAGCGCCTGAAGCTCGGCAAGGCTGCATTCCTGC...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGCAGGAATGCAGCCTTaGCGAGCTTCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQAGMQP*RASGAA
Trigger: GGCAGCGCCTGAAGCTCGGCAAGGCTGCATTCCTGC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGGGCAGCCTCGGCCTTaGCCTTCTTCACCACATGCA +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKGQPRP*PSSPHA
Trigger: TGCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGGGCAGCCTCGGCCTTaGCCTTCTTCACCACATGCA +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEGQPRP*PSSPHA
Trigger: TGCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACTGAGAGTACTCCTTTaGAAAGTGCTCCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSLRVLL*KVLRPE
Trigger: CTCAGGCCGGAGCACTTTGCAAAGGAGTACTCTCAG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGGTCTTCCTCAGCTTTaGGCCGGGCTTCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEGLPQL*AGLRHA
Trigger: AGCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCTCGCTGAGAGGGTGTaGCCCCGGAATGAACGCTCT +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGLAERV*PRNERS
Trigger: AGAGCGTTCATTCCGGGGGCACACCCTCTCAGCGAG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCCCAGTCTCGGTCTGTaGTCCTGCTTGGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGPSLGL*SCLGYG
Trigger: GCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGCAGGCCGCTTGGGCTaGCACAGGTGGTTGTGGATT +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRAGRLG*HRWLWI
Trigger: AATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGGCCTTCTTTGGCACTaGAGGCCGCTTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKGLLWH*RPLGLP
Trigger: TGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGTGGCACCCTCTGGATaGCAGCCACAAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEVAPSG*QPQGHH
Trigger: ATGATGCCCTTGTGGCTGGCATCCAGAGGGTGCCAC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACAGTGGCCACAGCAGTaGGAGCCACTGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEQWPQQ*EPLQKR
Trigger: CCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCACTG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGACCCTCATGACCGCGTaGCAGAAGTCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLTLMTA*QKSSSS
Trigger: TGAAGATGATGACTTCTGGCACGCGGTCATGAGGGT...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACTCGCGTCCACCATCTaGAGACAAAGGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRLASTI*RQRAEA
Trigger: CGCCTCAGCCCTTTGTCTGCAGATGGTGGACGCGAG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGATCCACCATTGCCATGTaGGCACTCATTTTTATGGGT +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRSTIAM*ALIFMG
Trigger: ACCCATAAAAATGAGTGCCCACATGGCAATGGTGGA...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGATGTCCTCTCCCTGTATaGATTTCTGCTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRCPLPV*ISAVSV
Trigger: GACAGAAACAGCAGAAATCCATACAGGGAGAGGACA...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGGCCGTGGGGTGTGGCTaGTTCTGTGGGGTCAGATTA +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKAVGCG*FCGVRL
Trigger: TAATCTGACCCCACAGAACCAGCCACACCCCACGGC...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGGCTCTTCGTGGCCGTaGGGTGTGGCTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQGSSWP*GVAGSV
Trigger: CACAGAACCAGCCACACCCCACGGCCACGAAGAGCC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAATCCGGGTCAGCCTGCTaGGGAACCACGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQESGSAC*GTTSAL
Trigger: TAGAGCAGACGTGGTTCCCCAGCAGGCTGACCCGGA...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGGAAGAAGCCATCCGTaGATGGTCCCTGGGGGAACG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGGRSHP*MVPGGT
Trigger: CGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGGCTCGAGCGGCCGCTaGCGTCATCTTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEGSSGR*RHLCLH
Trigger: ATGAAGACAAAGATGACGCCAGCGGCCGCTCGAGCC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGGGAGCTGCTGGTGCTaGACTTGGTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEGSCWC*TWSHSC
Trigger: ACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGGATCCTTGCCATGCTaGCTCGGACTCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRGSLPC*LGLCSL
Trigger: GAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACAGATGCCAGGAGGCTaGCGGGATCCTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEQMPGG*RDPCHA
Trigger: AGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACATTTGTCCACATCCTGTaGCTCGTGAAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTFVHIL*LVKELL
Trigger: GAGGAGCTCCTTCACGAGCCACAGGATGTGGACAAA...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGAGACACTTCCCATGTaGGTCACCACTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEETLPM*VTTGLQ
Trigger: CTGGAGCCCAGTGGTGACCCACATGGGAAGTGTCTC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACATGCCACAGGTGGTTGTaGATTGTGAGTGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTCHRWL*IVSAST
Trigger: TGTGGACGCACTCACAATCCACAACCACCTGTGGCA...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCGCACTGCAGGCCGCTTaGGCTGCCACAGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTALQAA*AATGGC
Trigger: ACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGC...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGGTCATTTACGAGTCTaGGCCTTCTTTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLGHLRV*AFFGTA
Trigger: TGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGCAAGAAAGCAAAGTaGATCACGTCTAATCTATGC +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSKKAK*ITSNLC
Trigger: GCATAGATTAGACGTGATCCACTTTGCTTTCTTGCT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACTCGGCCGTAGGCCTTaGCGCAGATCCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQLGRRP*RRSTAG
Trigger: ACCTGCAGTGGATCTGCGCCAAGGCCTACGGCCGAG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCTCATCCTCAATACTaGCATTGCTCAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSPHPQY*HCSGGS
Trigger: AGAGCCTCCTGAGCAATGTCAGTATTGAGGATGAGG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGAGAGTCCACGGCTCTaGATCGTGGGAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQESPRL*IVGVGA
Trigger: AGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGATGGGCCTCACCCATaGAATCGTGCTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGDGPHP*NRARLP
Trigger: AGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCCCCAATGTATCTGCTaGAAACCACAGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGPQCIC*KPQDGP
Trigger: AGGCCCATCCTGTGGTTTTCAGCAGATACATTGGGG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACAAGAGGTCCACTTCAATaGGGCTGGCCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTRGPLQ*GWPCSS
Trigger: TGAGGAGCAGGGCCAGCCTCATTGAAGTGGACCTCT...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCATCGATTCCACTCGCTaGGAGGGTGTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTIDSTR*EGVPPE
Trigger: TTCCGGGGGCACACCCTCTCAGCGAGTGGAATCGAT...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAGTAAAGCGCCCTaGACTGGCAGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRSSKAP*TGSQHH
Trigger: GTGATGCTGGCTGCCAGTTCAGGGCGCTTTACTGCT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTTGGCCCCGTGCCAGTaGGTTTGTAGATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGLAPCQ*VCRFPQ
Trigger: CTGAGGAAATCTACAAACTCACTGGCACGGGGCCAA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACATTCCCCACCCTCATaGCCGCGTGCCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTHSPPS*PRARSH
Trigger: ATGACTTCTGGCACGCGGTCATGAGGGTGGGGAATG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGGCTGCCTAGGAAACTaGGTTTGGTCGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEGCLGN*VWSRWR
Trigger: TCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCCCTGTATGGATTTCTaGTGTTTCTGTCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLPCMDF*CFCLSG
Trigger: GCCACTGAGACAGAAACAGCAGAAATCCATACAGGG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACATGGCCAGGCTATTGCTaGTCCTCGAGGCTGACCATC +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTWPGYC*SSRLTI
Trigger: GATGGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCA...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAATTCTGGCCAGGCTATTaGTGCTCCTCGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEFWPGY*CSSRLT
Trigger: GGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAA...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACTGGGGAACCACGTCTaGTCTAACAATAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSLGNHV*SNNSHK
Trigger: CTTGTGGCTATTGTTAGAGCAGACGTGGTTCCCCAG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATGGTCTTCTGGGAGCTaGTGGTGCTGGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEWSSGS*WCWTWS
Trigger: AGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGTGGTCTTCTGGGAGCTaGTGGTGCTGGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKWSSGS*WCWTWS
Trigger: AGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCA...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACTCTGCTCCCTCTTCTaGCTCCACGTCGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQLCSLF*LHVVRG
Trigger: CCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATGCTGGCTCGGACTCTaGTCCCTCTTCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQCWLGL*SLFCLH
Trigger: GTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATTTCTCTCCAGCTCGTaGAGAGCCACAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSFLSSS*RATGSF
Trigger: AAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTTCAGGATGGCCTGCTaGAGCGTACTGATGGTTTCG +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGFRMAC*SVLMVS
Trigger: CGAAACCATCAGTACGCTGCAGCAGGCCATCCTGAA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGGGAAGGGTCTCAAGTaGGGGAGCGTCTCTACACTG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGGKGLK*GSVSTL
Trigger: CAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAACCTCCGCTTCCAGCTaGTGCTTGCGCACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGTSASS*CLRTRA
Trigger: GGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGT...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATCTAGGATCTGCTGCTaGTTCCTCCGCAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESRICC*FLRRYS
Trigger: GGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGCTTTGACTTGGGCTTaGCGAGCCCCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRALTWA*RAPAPL
Trigger: TAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTCGGTCTGTGCTCCTaGTTGGGTTACGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELGLCS*LGYGSV
Trigger: TACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACCTTTGGACGCCAGCTaGACCGGGGTCATTTACGAG +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTPLDAS*TGVIYE
Trigger: CTCGTAAATGACCCCGGTGCAGCTGGCGTCCAAAGG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGTGGCACCCTCTGGATaGCAGCCACAAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKVAPSG*QPQGHH
Trigger: ATGATGCCCTTGTGGCTGGCATCCAGAGGGTGCCAC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACAGTGGCCACAGCAGTaGGAGCCACTGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQQWPQQ*EPLQKR
Trigger: CCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCACTG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGCTCCTCTGAGAGCATaGAGCGCTTCCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEAPLRA*SASRCR
Trigger: TCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCGGCAGCTGGTCAGTTaGAGCAGTGTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTRQLVS*SSVWQP
Trigger: TGGCTGCCAGACACTGCTGCAACTGACCAGCTGCCG...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAATGCGTTTGGTCGCGTTaGAGATCGGTACAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQECVWSR*RSVQEA
Trigger: GGCCTCCTGTACCGATCTCCAACGCGACCAAACGCA...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGCCGTGGGGTGTGGCTaGTTCTGTGGGGTCAGATTA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRAVGCG*FCGVRL
Trigger: TAATCTGACCCCACAGAACCAGCCACACCCCACGGC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCCCGGGGTGAGGCCCTaGGGAACTCCGGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCPGVRP*GTPGQP
Trigger: AGGCTGACCCGGAGTTCCCCAGGGCCTCACCCCGGG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGAAGCCATCCGTGGATaGTCCCTGGGGGAACGGATC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQEAIRG*SLGERI
Trigger: GATCCGTTCCCCCAGGGACCATCCACGGATGGCTTC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGGAAGAAGCCATCCGTaGATGGTCCCTGGGGGAACG +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKGRSHP*MVPGGT
Trigger: CGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACACGGCTCTGAATCGTaGGAGTTGGGGCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSHGSES*ELGLFE
Trigger: TTCAAAAAGCCCCAACTCCCACGATTCAGAGCCGTG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCGCTCCCACTCGCCATaGAGACACTGCTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGRSHSP*RHCSSE
Trigger: CTCAGATGAGCAGTGTCTCCATGGCGAGTGGGAGCG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACAGATGCCAGGAGGCTaGCGGGATCCTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQQMPGG*RDPCHA
Trigger: AGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTTTGTCCACATCCTGTaGCTCGTGAAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGFVHIL*LVKELL
Trigger: GAGGAGCTCCTTCACGAGCCACAGGATGTGGACAAA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTGGCACTGGGACTGTaGGGGACTTCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELALGL*GTSSEA
Trigger: AGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCCAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGAGTGGCTCCACGAAGTaGACTGGTGCCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSGSTK*TGAFTL
Trigger: CAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCGCCCGTGGGAGAGAGTaGCTCCACGAAGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVARGRE*LHEVDW
Trigger: CCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGC...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATCGGGAGGAGCCCTGTaGCCTGTCTTTTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRSGGAL*PVFWDL
Trigger: AAGGTCCCAAAAGACAGGCCACAGGGCTCCTCCCGA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCTCCGAGGGTGGCTGCTaGCAGGGAAGGGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTSEGGC*QGRVSS
Trigger: ACTTGAGACCCTTCCCTGCCAGCAGCCACCCTCGGA...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTCCGAGGGTGGCTGCTaGCAGGGAAGGGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKSEGGC*QGRVSS
Trigger: ACTTGAGACCCTTCCCTGCCAGCAGCCACCCTCGGA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAGACATCTGAGGAGCTaGACCCCACCTCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKRHLRS*TPPPSH
Trigger: GTGTGAAGGAGGTGGGGTCCAGCTCCTCAGATGTCT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAAGACATCTGAGGAGCTaGACCCCACCTCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPERHLRS*TPPPSH
Trigger: GTGTGAAGGAGGTGGGGTCCAGCTCCTCAGATGTCT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAAGGCCGCCCGCTTCTTaGCGAGCTCATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQRPPAS*RAHLPL
Trigger: AAGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCT...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAATATGGAATTCTTGTaGGGTTCGTTCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSNMEFL*GSFTFP
Trigger: TGGAAAAGTGAACGAACCCCACAAGAATTCCATATT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATTGGGCTGCCACAGGTaGTTGTGGATTGTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELGCHR*LWIVSA
Trigger: CGCACTCACAATCCACAACCACCTGTGGCAGCCCAA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAAGTCTGGGCCTTCTTTaGCACTGCAGGCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSLGLL*HCRPLG
Trigger: CCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACT...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGCCTGGATGACAGACTaGTGTCCCTGTAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQAWMTD*CPCKAA
Trigger: GGCCGCCTTACAGGGACACCAGTCTGTCATCCAGGC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATTTGCTTTATGTTGCTaGGCAAAGGCCAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSFALCC*AKARLS
Trigger: AGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACATCCAGAACTTCTTTaGGGCTCATCTGCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQHPELL*GSSAPK
Trigger: TTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATG...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTATCCTCTGCGTGAGATaGGCGCTGAGAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGILCVR*ALREGF
Trigger: AAACCCCTCTCTCAGCGCTCATCTCACGCAGAGGAT...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACAACGGGAAGTAGGGTaGCTGCCTAGCAGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEQREVG*LPSRKV
Trigger: CACCTTTCTGCTAGGCAGTCACCCTACTTCCCGTTG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTCCCTGCAGCAGGGCTaGCTAGGAAACTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKSLQQG*LGNCVW
Trigger: CCAAACGCAGTTTCCTAGGCAGCCCTGCTGCAGGGA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCTCGGTGGGGTCGATaGCCATGGGGAATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSRWGR*PWGILS
Trigger: GCTCAGAATTCCCCATGGGCATCGACCCCACCGAGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCTCTCGGTGGGGTCGATaGCCATGGGGAATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTSRWGR*PWGILS
Trigger: GCTCAGAATTCCCCATGGGCATCGACCCCACCGAGA...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGATCCGAGTCAGAATCCTaGCTGAGGAGAGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERSESES*LRRVHG
Trigger: GCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGA...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAACCTTCATGTCCTCCTaGAGTTTGGCCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPETFMSS*SLADSS
Trigger: GGAAGAGTCGGCCAAACTGCAGGAGGACATGAAGGT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGACCTTCATGTCCTCCTaGAGTTTGGCCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKTFMSS*SLADSS
Trigger: GGAAGAGTCGGCCAAACTGCAGGAGGACATGAAGGT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATCGCCATGGAGACACTaGTCATCTGAGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRSPWRH*SSERLC
Trigger: GCACAGCCTCTCAGATGAGCAGTGTCTCCATGGCGA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATCCTCCAGCTGCATGTaGAGCTGTACCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPESSSCM*SCTSSD
Trigger: ATCTGAGCTGGTACAGCTGCACATGCAGCTGGAGGA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACACCACATGCAGGAATaGAGCCTTGCCGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRHHMQE*SLAELQ
Trigger: CTGAAGCTCGGCAAGGCTGCATTCCTGCATGTGGTG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTACTCCTTTGCAAAGTaGTCCGGCCTGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKYSFAK*SGLRGG
Trigger: CCCACCCCTCAGGCCGGAGCACTTTGCAAAGGAGTA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTTTCTCTCCAGCTCGTaGAGAGCCACAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGFLSSS*RATGSF
Trigger: AAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGGGAAGGGTCTCAAGTaGGGGAGCGTCTCTACACTG +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERGKGLK*GSVSTL
Trigger: CAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGATCCGCTTCCAGCTGCTaGTTGCGCACGCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRSASSC*LRTRAS
Trigger: GGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGA...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTCCGCTTCCAGCTGCTaGTTGCGCACGCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSASSC*LRTRAS
Trigger: GGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGATGCTCCTCTAGGATCTaGTGCTGCTTCCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERCSSRI*CCFLRR
Trigger: CCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGAGCA...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGGAGCAGCACCATCACTaGCGTCTCTCATCAAATCCT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGEQHHH*RLSSNP
Trigger: AGGATTTGATGAGAGACGGCAGTGATGGTGCTGCTC...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGCAGTCCATCTTTGGTaGACGCACACAGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRAVHLW*THTAMC
Trigger: GCACATGGCTGTGTGCGTGCACCAAAGATGGACTGC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGGCTCCTGAACATCCCTaGGCTGAACAAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGAPEHP*AEQNLA
Trigger: AGCCAGATTTTGTTCAGCCCAGGGATGTTCAGGAGC...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTGCGTTTGGTCGCGTTaGAGATCGGTACAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKCVWSR*RSVQEA
Trigger: GGCCTCCTGTACCGATCTCCAACGCGACCAAACGCA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGAGTGGCAATAAAGGATaGGATGGGCTGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSGNKG*DGLKAA
Trigger: TGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTGTCCTCTCCCTGTATaGATTTCTGCTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLCPLPV*ISAVSV
Trigger: GACAGAAACAGCAGAAATCCATACAGGGAGAGGACA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAGCAAAAGGTGTTGGCTaGGACGCAGGCCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEAKGVG*DAGLVF
Trigger: AAAAACCAGGCCTGCGTCCCAGCCAACACCTTTTGC...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGCCGTGGGGTGTGGCTaGTTCTGTGGGGTCAGATTA +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERAVGCG*FCGVRL
Trigger: TAATCTGACCCCACAGAACCAGCCACACCCCACGGC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTCCGTGGATGGTCCCTaGGGGAACGGATCGAATCCG +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVSVDGP*GNGSNP
Trigger: CGGATTCGATCCGTTCCCCCAGGGACCATCCACGGA...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCACGGCTCTGAATCGTaGGAGTTGGGGCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGHGSES*ELGLFE
Trigger: TTCAAAAAGCCCCAACTCCCACGATTCAGAGCCGTG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATCCTCTCCGCAAAGCTaGTCATCTTCACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRSSPQS*SSSRSH
Trigger: GTGGGAGCGTGAAGATGACCAGCTTTGCGGAGAGGA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGCTCTCAGACGCATCTaGCGTGGTCTTCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKALRRI*RGLLGA
Trigger: AGCTCCCAGAAGACCACGCCAGATGCGTCTGAGAGC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACTTAGAGCCTGGCACTaGGACTGTGGGGGACTTCAT +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQELRAWH*DCGGLH
Trigger: ATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGGCCAGCCACGCCCGTaGGAGAGAGTGGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRGQPRP*ERVAPR
Trigger: TCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGCC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGATCGGGAGGAGCCCTGTaGCCTGTCTTTTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERSGGAL*PVFWDL
Trigger: AAGGTCCCAAAAGACAGGCCACAGGGCTCCTCCCGA...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACACCAGGCCAGGGTCCGTaGGCGTCCGAGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTPGQGP*ASEGGC
Trigger: GCAGCCACCCTCGGACGCCCACGGACCCTGGCCTGG...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGCTCCGAAAGAATGTTaGCATCTTTGGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLAPKEC*HLWKRT
Trigger: TGTCCTCTTCCAAAGATGCCAACATTCTTTCGGAGC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGTCTGTGCTCCTGCTTaGGTTACGGCTCAGTATGGG +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEVCAPA*VTAQYG
Trigger: CCCATACTGAGCCGTAACCCAAGCAGGAGCACAGAC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCAGCTCCTCCAATATaGAATTCTTGTGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSPAPPI*NSCGVR
Trigger: ACGAACCCCACAAGAATTCCATATTGGAGGAGCTGG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACATCCTCACCCTGCCTaGCATCCTCTGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQHPHPA*HPLREM
Trigger: CATCTCACGCAGAGGATGCCAGGCAGGGTGAGGATG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGCATCCTCACCCTGCCTaGCATCCTCTGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKHPHPA*HPLREM
Trigger: CATCTCACGCAGAGGATGCCAGGCAGGGTGAGGATG...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCAAGAAAGCAAAGTaGATCACGTCTAATCTATGC +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRSKKAK*ITSNLC
Trigger: GCATAGATTAGACGTGATCCACTTTGCTTTCTTGCT...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAAATGATGGCTGCAGTTaGCTCGGCTTGCCTACTTTA +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTNDGCS*LGLPTL
Trigger: TAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATT...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCCATCCACTTACTTaGAGTTCTGAAATAACTGCA +
Preference number: 4 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRSHPLT*SSEITA
Trigger: TGCAGTTATTTCAGAACTCCAAGTAAGTGGATGGCT...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCAGTTGCAGCAGTGTCTaGCAGCCATGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVSCSSV*QPWLAR
Trigger: GCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACT...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGCCCATGGGGAATTCTaGGCATGGAATCGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRAHGEF*AWNRGK
Trigger: TTTACCCCGATTCCATGCTCAGAATTCCCCATGGGC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTTCCTCCCCGTTGTGCTaGGAGTACTCCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGSSPLC*EYSFAK
Trigger: CTTTGCAAAGGAGTACTCTCAGCACAACGGGGAGGA...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGAGAGTAAGTGTCCGCTaGTTGCTTTCATCATGGAGC +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGRVSVR*LLSSWS
Trigger: GCTCCATGATGAAAGCAATCAGCGGACACTTACTCT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACTTTCTGTTCATCCTTaGAGAAGAAGCCGACCCCCG +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRLSVHP*RRSRPP
Trigger: CGGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAAGGACAGGCTGGAGCCTaGCTGAGTCCGGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMEGQAGA*LSPAQV
Trigger: AACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCC...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCATCACGAAACAGTATaGTGTAGTGATTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLHHETV*CSDWHH
Trigger: GTGATGCCAATCACTACATCATACTGTTTCGTGATG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAATTTGCAAAAGGTCTGTaGCTTTGCACACTTCGTACC +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQFAKGL*LCTLRT
Trigger: GGTACGAAGTGTGCAAAGTCACAGACCTTTTGCAAA...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGATCCTCTGCGTGAGATaGGCGCTGAGAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKILCVR*ALREGF
Trigger: AAACCCCTCTCTCAGCGCTCATCTCACGCAGAGGAT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEPGTWL*TPSAGS
Trigger: GCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCCCGGGACCTGGCTGTaGACACCCTCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLPGTWL*TPSAGS
Trigger: GCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGG...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACATTCTCTTCAAAGGACTaGGGAAAGGGGAATAAGACC +
Preference number: 4 (lower is better)
Translates to: WLARTCSWECPRSTEASTFSSKD*GKGNKT
Trigger: GGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAA...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTATTCAAGTCGCGACTaGCAGTCATTTTCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLYSSRD*QSFSFV
Trigger: TACGAAGGAAAATGACTGGCAGTCGCGACTTGAATA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCCGCTTCTCCTCCAGCTaGATGTGCAGCTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVRFSSS*MCSCTS
Trigger: GCTGGTACAGCTGCACATGCAGCTGGAGGAGAAGCG...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACCCTTCTTCACCACATaGAGGAATGCAGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQPFFTT*RNAALP
Trigger: CGGCAAGGCTGCATTCCTGCATGTGGTGAAGAAGGG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGCTGAGAGTACTCCTTTaGAAAGTGCTCCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKLRVLL*KVLRPE
Trigger: CTCAGGCCGGAGCACTTTGCAAAGGAGTACTCTCAG...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGATTTTCAGGATGGCCTaGTGCAGCGTACTGATGGTT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGIFRMA*CSVLMV
Trigger: AACCATCAGTACGCTGCAGCAGGCCATCCTGAAAAT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTTCACTTTGTGGTCCTaGGAGTTATTCTTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLFTLWS*ELFLEP
Trigger: AGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCACGAAGTGGACTGGTaGCTTCACTTTGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGHEVDW*LHFVVL
Trigger: CAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAAGGTCTTCCTCAGCTTTaGGCCGGGCTTCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMEGLPQL*AGLRHA
Trigger: AGCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACC...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCCTCTAGGATCTGCTaGTGCTTCCTCCGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSSRIC*CFLRRY
Trigger: GTACCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTGCTCCTCTAGGATCTaGTGCTGCTTCCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVCSSRI*CCFLRR
Trigger: CCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGAGCA...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGGTTGTGGATTGTGAGTaGGTCCACACTGACAGACAT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGVVDCE*VHTDRH
Trigger: ATGTCTGTCAGTGTGGACGCACTCACAATCCACAAC...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCCCTTTGGACGCCAGCTaGACCGGGGTCATTTACGAG +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVPLDAS*TGVIYE
Trigger: CTCGTAAATGACCCCGGTGCAGCTGGCGTCCAAAGG...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAAGCAGTGCGAGCCACTaGAAAAGCGGCATCTACTCC +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERSSASH*KSGIYS
Trigger: GGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCT...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAACCCTCATGACCGCGTaGCAGAAGTCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPETLMTA*QKSSSS
Trigger: TGAAGATGATGACTTCTGGCACGCGGTCATGAGGGT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCCCGAGCGGAGGAGGTaGCGAGCCCGCGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSPERRR*RARGPK
Trigger: CTTTGGGCCGCGGGCTCGGCACCTCCTCCGCTCGGG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTAGTCTGCTAAGAGACTaGACCGCAGTGACACGTGCA +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGSLLRD*TAVTRA
Trigger: TGCACGTGTCACTGCGGTGCAGTCTCTTAGCAGACT...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAAGGCCGGCTGCTCTTCTaGTGTAACACTGTTTTCGCG +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQGRLLF*CNTVFA
Trigger: CGCGAAAACAGTGTTACACCAGAAGAGCAGCCGGCC...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGGCCGGCTGCTCTTCTaGTGTAACACTGTTTTCGCG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQGRLLF*CNTVFA
Trigger: CGCGAAAACAGTGTTACACCAGAAGAGCAGCCGGCC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTAGGAAACTGCGTTTaGTCGCGTTGGAGATCGGTA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELGNCV*SRWRSV
Trigger: TACCGATCTCCAACGCGACCAAACGCAGTTTCCTAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAAGGAGGCTCTTCCCGTaGCTCTTCGTGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKRRLFP*LFVAVG
Trigger: CCCCACGGCCACGAAGAGCCACGGGAAGAGCCTCCT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATGGGGTCGATGCCCATaGGGAATTCTGAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRWGRCP*GILSME
Trigger: TTCCATGCTCAGAATTCCCCATGGGCATCGACCCCA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTGAAAACCACAGGATaGGCCTCACCCATGAAATCG +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELKTTG*ASPMKS
Trigger: CGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGACGTCGTCAGAGGGGCTaGGCAGCTCTCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGRRQRG*AALRRI
Trigger: GATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACG...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGGAGCGTCTCTACACTaGGCGTTGGGGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGGASLH*ALGFYF
Trigger: GAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGGGTGGAGGAGCACTTaGTGCCGGAGTCGCTGCACG +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRGWRST*CRSRCT
Trigger: CGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGGGTGGAGGAGCACTTaGTGCCGGAGTCGCTGCACG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCGWRST*CRSRCT
Trigger: CGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTTGGGCTGCCACAGGTaGTTGTGGATTGTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKLGCHR*LWIVSA
Trigger: CGCACTCACAATCCACAACCACCTGTGGCAGCCCAA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAATCTGGCAGCCATGGCTaGCACGCACCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKSGSHG*HAPAPG
Trigger: CCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAGA...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGAATCTTCCGGCAGCTaGTCAGTTGCAGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEESSGS*SVAAVS
Trigger: AGACACTGCTGCAACTGACCAGCTGCCGGAAGATTC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGGTTGGCGGCGATCTTaGCGCGCGCCGCGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGGWRRS*RAPRRS
Trigger: GCTACGACGCGGCGCGCGCCAAGATCGCCGCCAACC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR CAA 72 bp TGGGAATGTCCGCGCTCCACAGAAGCATCAACACCATaGGGACCAAGGCAGAAAGAACCCAAAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: WECPRSTEASTP*GPRQKEPKAIH
Trigger: GTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACCACCTTCTCGATGCTaGTCATCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQPPSRC*SSPQCR
Trigger: CCTACACTGTGGAGATGATCAGCATCGAGAAGGTGG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACCTCATCCTCAATACTaGCATTGCTCAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRPHPQY*HCSGGS
Trigger: AGAGCCTCCTGAGCAATGTCAGTATTGAGGATGAGG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCCTCATCCTCAATACTaGCATTGCTCAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGPHPQY*HCSGGS
Trigger: AGAGCCTCCTGAGCAATGTCAGTATTGAGGATGAGG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGTTCATCCTCCTTGGTaGTCACCTGCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKVHPPW*SPASLS
Trigger: CGAAAGAGAAGCAGGTGATCACCAAGGAGGATGAAC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGCCCATGGGGAATTCTaGGCATGGAATCGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERAHGEF*AWNRGK
Trigger: TTTACCCCGATTCCATGCTCAGAATTCCCCATGGGC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGACCCCAATGTATCTGCTaGAAACCACAGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERPQCIC*KPQDGP
Trigger: AGGCCCATCCTGTGGTTTTCAGCAGATACATTGGGG...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACCCCAATGTATCTGCTaGAAACCACAGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQPQCIC*KPQDGP
Trigger: AGGCCCATCCTGTGGTTTTCAGCAGATACATTGGGG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCCTCCCCGTTGTGCTaGGAGTACTCCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSSPLC*EYSFAK
Trigger: CTTTGCAAAGGAGTACTCTCAGCACAACGGGGAGGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAGAGTAAGTGTCCGCTaGTTGCTTTCATCATGGAGC +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKRVSVR*LLSSWS
Trigger: GCTCCATGATGAAAGCAATCAGCGGACACTTACTCT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACATCCAGAACTTCTTTaGGGCTCATCTGCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEHPELL*GSSAPK
Trigger: TTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGAATAATCGGCTTGTTTaGTTTACTACTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLNNRLV*FTTGLL
Trigger: AAGGAGCCCAGTAGTAAATCAAACAAGCCGATTATT...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCTTGGCCCCGTGCCAGTaGGTTTGTAGATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTLAPCQ*VCRFPQ
Trigger: CTGAGGAAATCTACAAACTCACTGGCACGGGGCCAA...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACGATCATTTTCTTGGTaGTGTTCTTTGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTRSFSW*CSLAPC
Trigger: GCACGGGGCCAAAGAACATCACCAAGAAAATGATCG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCGATCATTTTCTTGGTaGTGTTCTTTGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGRSFSW*CSLAPC
Trigger: GCACGGGGCCAAAGAACATCACCAAGAAAATGATCG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACTTGCCTACTTTAAATaGGGCAAACATCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQLAYFK*GKHQLL
Trigger: TAGGAGCTGATGTTTGCCTCATTTAAAGTAGGCAAG...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACCCTGTATGGATTTCTaGTGTTTCTGTCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEPCMDF*CFCLSG
Trigger: GCCACTGAGACAGAAACAGCAGAAATCCATACAGGG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCTGGGGAACCACGTCTaGTCTAACAATAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGLGNHV*SNNSHK
Trigger: CTTGTGGCTATTGTTAGAGCAGACGTGGTTCCCCAG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACGCTGGCTTAAGAACTaGTGGCATCAAAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRRWLKN*WHQRLQ
Trigger: TTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCAGCG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGATCCTCGGCCTTGCGCTaGTGCTTCAGGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRSSALR*CFRRKA
Trigger: GGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGA...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGGTTGTGGATTGTGAGTaGGTCCACACTGACAGACAT +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKVVDCE*VHTDRH
Trigger: ATGTCTGTCAGTGTGGACGCACTCACAATCCACAAC...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGCAGGCCGCTTGGGCTaGCACAGGTGGTTGTGGATT +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGAGRLG*HRWLWI
Trigger: AATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGC...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGTGGCAATAAAGGATaGGATGGGCTGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQESGNKG*DGLKAA
Trigger: TGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGCAAAAGGTGTTGGCTaGGACGCAGGCCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERAKGVG*DAGLVF
Trigger: AAAAACCAGGCCTGCGTCCCAGCCAACACCTTTTGC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACGTGGCCGTGGGGTGTaGCTGGTTCTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRRGRGV*LVLWGQ
Trigger: CTGACCCCACAGAACCAGCCACACCCCACGGCCACG...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCACGTGGCCGTGGGGTGTaGCTGGTTCTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: DSFHGENPELIQTSHGNARGRGV*LVLWGQ
Trigger: CTGACCCCACAGAACCAGCCACACCCCACGGCCACG...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTGGCTTAAGAACTGCTaGCATCAAAGGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGWLKNC*HQRLQE
Trigger: TTCTTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAGTGGTCCTGTCTCGGTaGGGTCGATGCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKVVLSR*GRCPWG
Trigger: TCCCCATGGGCATCGACCCCACCGAGACAGGACCAC...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCTGAAAACCACAGGATaGGCCTCACCCATGAAATCG +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGLKTTG*ASPMKS
Trigger: CGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACAGCTGTTGAGTCTCTaGAGCTTCCTCTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQQLLSL*SFLSAK
Trigger: CTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAAGCTCTCAGACGCATCTaGCGTGGTCTTCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMEALRRI*RGLLGA
Trigger: AGCTCCCAGAAGACCACGCCAGATGCGTCTGAGAGC...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAATTTGTCCACATCCTGTaGCTCGTGAAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQFVHIL*LVKELL
Trigger: GAGGAGCTCCTTCACGAGCCACAGGATGTGGACAAA...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGGCCAGCCACGCCCGTaGGAGAGAGTGGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTGQPRP*ERVAPR
Trigger: TCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGCC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGGAGCGTCTCTACACTaGGCGTTGGGGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQGASLH*ALGFYF
Trigger: GAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGACATGTGGGTCACCACTaGGCTCCAGGGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGHVGHH*APGHCP
Trigger: TGGACAGTGCCCTGGAGCCCAGTGGTGACCCACATG...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGGTTACGGCTCAGTATaGGCAGGGCTTCCATCGATT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQGYGSV*AGLPSI
Trigger: AATCGATGGAAGCCCTGCCCATACTGAGCCGTAACC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCCAGCTCCTCCAATATaGAATTCTTGTGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKPAPPI*NSCGVR
Trigger: ACGAACCCCACAAGAATTCCATATTGGAGGAGCTGG...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATGCCACAGGTGGTTGTaGATTGTGAGTGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQCHRWL*IVSAST
Trigger: TGTGGACGCACTCACAATCCACAACCACCTGTGGCA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAATGATGGCTGCAGTTaGCTCGGCTTGCCTACTTTA +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKNDGCS*LGLPTL
Trigger: TAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCAGTGTCTGGCAGCCATaGCTGGCACGCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSVWQP*LARTCS
Trigger: GGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACT...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAACTCGGCCGTAGGCCTTaGCGCAGATCCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKLGRRP*RRSTAG
Trigger: ACCTGCAGTGGATCTGCGCCAAGGCCTACGGCCGAG...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCAGTTTCATCTGCTCTaGGCAATAATAGTGAATCAC +
Preference number: 4 (lower is better)
Translates to: AVRATAKAASTPPSSPCLQFHLL*AIIVNH
Trigger: GTGATTCACTATTATTGCCCAGAGCAGATGAAACTG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAATATAAAGCAAGGAGTTaGTGTCGCCTGGTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEYKARS*CRLVSE
Trigger: TTCGCTGACCAGGCGACACCAACTCCTTGCTTTATA...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCACTGGCCTGGGGACTTaGGACATCAGGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTTGLGT*DIRNVH
Trigger: ATGGACATTCCTGATGTCCCAAGTCCCCAGGCCAGT...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGTTCATCCTCCTTGGTaGTCACCTGCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQVHPPW*SPASLS
Trigger: CGAAAGAGAAGCAGGTGATCACCAAGGAGGATGAAC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGATCCTGCGGTTTCCACTaGCAGTGGTCCTGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGSCGFH*QWSCLG
Trigger: ACCGAGACAGGACCACTGTCAGTGGAAACCGCAGGA...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGGACAGGCTGGAGCCTaGCTGAGTCCGGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCGQAGA*LSPAQV
Trigger: AACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCATGTGTACTCGGCCACTaGGGCCAGGGAAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: DSFHGENPELIQTSHGNACVLGH*GQGRCR
Trigger: GCGGCATCTTCCCTGGCCTCAGTGGCCGAGTACACA...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACGCTGGCTTAAGAACTaGTGGCATCAAAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQRWLKN*WHQRLQ
Trigger: TTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCAGCG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGTCGGCCTTGCGCTGCTaGTTCAGGAGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNESALRC*FRRKAA
Trigger: GGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGA...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACATTAATGAATGATGGCTaGAGTTGGCTCGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTLMNDG*SWLGLP
Trigger: AGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAA...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGTGGCTGGCACGCACCTaGTCCTGGGAATGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEWLART*SWECPR
Trigger: GCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCATCAGGAATGTCCATaGCACATTAGTGCTTACTCG +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKHQECP*HISAYS
Trigger: CGAGTAAGCACTAATGTGGCATGGACATTCCTGATG...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCGCTCCTGAACATCCCTaGGCTGAACAAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTAPEHP*AEQNLA
Trigger: AGCCAGATTTTGTTCAGCCCAGGGATGTTCAGGAGC...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAGTGGCAATAAAGGATaGGATGGGCTGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKSGNKG*DGLKAA
Trigger: TGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGCTGCTTCTCTTTCGCTaGCTTAAGAACTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKLLLFR*LKNCWH
Trigger: ATGCCAGCAGTTCTTAAGCCAGCGAAAGAGAAGCAG...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACTGCTTCTCTTTCGCTaGCTTAAGAACTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQELLLFR*LKNCWH
Trigger: ATGCCAGCAGTTCTTAAGCCAGCGAAAGAGAAGCAG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGGAAGAAGCCATCCGTaGATGGTCCCTGGGGGAACG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCGRSHP*MVPGGT
Trigger: CGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAAAGTCTTCGGTTTTaGAAACAGCGTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGESLRF*KQRPHS
Trigger: ACTGTGGGGACGCTGTTTCCAAAACCGAAGACTTTC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACCGACCCCCGGCTTCTaGTCGCCTTCGCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQPTPGF*SPSLTR
Trigger: CCTTGTCAGCGAAGGCGACCAGAAGCCGGGGGTCGG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TGTCCAAGCATGAAGAACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTGGTCTGTGCTCCTGCTTaGGTTACGGCTCAGTATGGG +
Preference number: 4 (lower is better)
Translates to: CPSMKNAGTLLSIIRRTLVCAPA*VTAQYG
Trigger: CCCATACTGAGCCGTAACCCAAGCAGGAGCACAGAC...CAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGTTCTTCATGCTTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCAGTCTGGGCCTTCTTTaGCACTGCAGGCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSLGLL*HCRPLG
Trigger: CCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACT...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGGTCATTTACGAGTCTaGGCCTTCTTTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQGHLRV*AFFGTA
Trigger: TGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGTCTGGGTCACCCTTTaGACGCCAGCTGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGVWVTL*TPAAPG
Trigger: CCCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGAC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGCATCATTTACGAGTCTaGGTCACCCTTTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKHHLRV*VTLWTP
Trigger: TGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATG...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACCCCGTGGCACCCTCTaGATGCCAGCCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQPRGTL*MPATRA
Trigger: TGCCCTTGTGGCTGGCATCCAGAGGGTGCCACGGGG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAATGATGGCTGCAGTTaGCTCGGCTTGCCTACTTTA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRNDGCS*LGLPTL
Trigger: TAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAAAGTGCATCACCTTTTaGGACAAACATGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQKCITF*DKHAQN
Trigger: ATTCTGAGCATGTTTGTCCCAAAAGGTGATGCACTT...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGCTGCTCCTCGAGGCTaGCCATCAACTCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRAAPRG*PSTRVK
Trigger: TTTGACCCGAGTTGATGGTCAGCCTCGAGGAGCAGC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCACAACTCGCAGCGTaGTGTAGAGCAAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSQLAA*CRAKGV
Trigger: AACACCTTTTGCTCTACATCACGCTGCGAGTTGTGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCGTTCATCCTCCTTGGTaGTCACCTGCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVVHPPW*SPASLS
Trigger: CGAAAGAGAAGCAGGTGATCACCAAGGAGGATGAAC...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAATCCTGCGGTTTCCACTaGCAGTGGTCCTGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKSCGFH*QWSCLG
Trigger: ACCGAGACAGGACCACTGTCAGTGGAAACCGCAGGA...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAGAGAGTCCACGGCTCTaGATCGTGGGAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAESPRL*IVGVGA
Trigger: AGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTC...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTTTGCTTTATGTTGCTaGGCAAAGGCCAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKFALCC*AKARLS
Trigger: AGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAGAGTAAGTGTCCGCTaGTTGCTTTCATCATGGAGC +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKRVSVR*LLSSWS
Trigger: GCTCCATGATGAAAGCAATCAGCGGACACTTACTCT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACATCCAGAACTTCTTTaGGGCTCATCTGCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQHPELL*GSSAPK
Trigger: TTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACAGGTGTGCCCCCGGAATaGACGCTCTCGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTGVPPE*TLSGSV
Trigger: GACAGAACCCGAGAGCGTTCATTCCGGGGGCACACC...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGTGTGTACTCGGCCACTaGGGCCAGGGAAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNECVLGH*GQGRCR
Trigger: GCGGCATCTTCCCTGGCCTCAGTGGCCGAGTACACA...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGAATAATCGGCTTGTTTaGTTTACTACTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGNNRLV*FTTGLL
Trigger: AAGGAGCCCAGTAGTAAATCAAACAAGCCGATTATT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATTTGCAAAAGGTCTGTaGCTTTGCACACTTCGTACC +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRFAKGL*LCTLRT
Trigger: GGTACGAAGTGTGCAAAGTCACAGACCTTTTGCAAA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TRASFTSLGHPLDASCTGTSNLC*RRTSSK
Trigger: CTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACTTGCCTACTTTAAATaGGGCAAACATCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPELAYFK*GKHQLL
Trigger: TAGGAGCTGATGTTTGCCTCATTTAAAGTAGGCAAG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAACGGCACGCTCCTCTaGGAGCATGCAGCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIANGTLL*EHAALP
Trigger: TGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGCCTGGTCAGCGAAATaGGCCACAGCAACCTCACAC +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRAWSAK*ATATSH
Trigger: GTGTGAGGTTGCTGTGGCTCATTTCGCTGACCAGGC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTGGCCAGGCTATTGCTaGTCCTCGAGGCTGACCATC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCWPGYC*SSRLTI
Trigger: GATGGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTCCGAGTCAGAATCCTaGCTGAGGAGAGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSESES*LRRVHG
Trigger: GCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCATGCTGGCTCGGACTCTaGTCCCTCTTCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIACWLGL*SLFCLH
Trigger: GTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCA...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGGCTGGCGGGATCCTTaGCATGCTGGCTCGGACTCT +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTGWRDP*HAGSDS
Trigger: AGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGGGCAGCCTCGGCCTTaGCCTTCTTCACCACATGCA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRGQPRP*PSSPHA
Trigger: TGCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAGCCACAGGGTCTTTTaGTTTATGTTGCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKSHRVF*FMLLSK
Trigger: TTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGATCTTTGAGGCTCATCTaGTCCGAAAGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRSLRLI*SERMLA
Trigger: TGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGA...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCTGAAAGAAATTTGCAATCCGCTTCCAGCTGCTaGTTGCGCACGCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSETQRKLCKLSAERNLQSASSC*LRTRAS
Trigger: GGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGA...TTGCAAATTTCTTTCAGCGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCTCCGCAGGTACTCCTaGTTGATGAGCTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNELRRYS*LMSSRR
Trigger: GCGGCGCGAGCTCATCAAGCAGGAGTACCTGCGGAG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTTGGTGCCGGAGTCGCTaGACGACTCTTCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLWCRSR*TTLPGA
Trigger: TGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCA...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAAGCAGTGCGAGCCACTaGAAAAGCGGCATCTACTCC +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGSSASH*KSGIYS
Trigger: GGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCT...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGGCTCTTCGTGGCCGTaGGGTGTGGCTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQGSSWP*GVAGSV
Trigger: CACAGAACCAGCCACACCCCACGGCCACGAAGAGCC...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGATCCGGGTCAGCCTGCTaGGGAACCACGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRSGSAC*GTTSAL
Trigger: TAGAGCAGACGTGGTTCCCCAGCAGGCTGACCCGGA...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGTGGTCCTGTCTCGGTaGGGTCGATGCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGVVLSR*GRCPWG
Trigger: TCCCCATGGGCATCGACCCCACCGAGACAGGACCAC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGAAGCCATCCGTGGATaGTCCCTGGGGGAACGGATC +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKREAIRG*SLGERI
Trigger: GATCCGTTCCCCCAGGGACCATCCACGGATGGCTTC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAGAAGCCATCCGTGGATaGTCCCTGGGGGAACGGATC +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAEAIRG*SLGERI
Trigger: GATCCGTTCCCCCAGGGACCATCCACGGATGGCTTC...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGGCTCGAGCGGCCGCTaGCGTCATCTTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRGSSGR*RHLCLH
Trigger: ATGAAGACAAAGATGACGCCAGCGGCCGCTCGAGCC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCGCTCCCACTCGCCATaGAGACACTGCTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCRSHSP*RHCSSE
Trigger: CTCAGATGAGCAGTGTCTCCATGGCGAGTGGGAGCG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGGTGCCTTCACTTTGTaGTCCTGCGAGTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGGAFTL*SCELFL
Trigger: TAAGAATAACTCGCAGGACCACAAAGTGAAGGCACC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGCCCGTGGGAGAGAGTaGCTCCACGAAGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGARGRE*LHEVDW
Trigger: CCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAGGCCAAGGACAGGCTaGAGCCTGACTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTRPRTG*SLTESG
Trigger: GCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCT...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAAATATGGAATTCTTGTaGGGTTCGTTCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQNMEFL*GSFTFP
Trigger: TGGAAAAGTGAACGAACCCCACAAGAATTCCATATT...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGATTGGGCTGCCACAGGTaGTTGTGGATTGTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGLGCHR*LWIVSA
Trigger: CGCACTCACAATCCACAACCACCTGTGGCAGCCCAA...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAACATCCTCACCCTGCCTaGCATCCTCTGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKHPHPA*HPLREM
Trigger: CATCTCACGCAGAGGATGCCAGGCAGGGTGAGGATG...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAGTGTCTGGCAGCCATaGCTGGCACGCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTSVWQP*LARTCS
Trigger: GGAGCAGGTGCGTGCCAGCCATGGCTGCCAGACACT...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAAGTTGCAGCAGTGTCTaGCAGCCATGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRSCSSV*QPWLAR
Trigger: GCGTGCCAGCCATGGCTGCCAGACACTGCTGCAACT...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGATTCAGACGTCCCATaGGAATGCAATTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKDSDVP*ECNFPA
Trigger: AGCTGGAAAATTGCATTCCCATGGGACGTCTGAATC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGCTGCTCCTCGAGGCTaGCCATCAACTCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRAAPRG*PSTRVK
Trigger: TTTGACCCGAGTTGATGGTCAGCCTCGAGGAGCAGC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGATGGGCCTCACCCATaGAATCGTGCTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRDGPHP*NRARLP
Trigger: AGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAAGCTGCTCTTGCTGCTaGGAGATTTTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGSCSCC*EIFRMA
Trigger: GGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCT...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAAGAGGTCCACTTCAATaGGGCTGGCCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRRGPLQ*GWPCSS
Trigger: TGAGGAGCAGGGCCAGCCTCATTGAAGTGGACCTCT...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACATCACGAAACAGTATaGTGTAGTGATTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEHHETV*CSDWHH
Trigger: GTGATGCCAATCACTACATCATACTGTTTCGTGATG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCACATTCCCCACCCTCATaGCCGCGTGCCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAHSPPS*PRARSH
Trigger: ATGACTTCTGGCACGCGGTCATGAGGGTGGGGAATG...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGATTCTCTTCAAAGGACTaGGGAAAGGGGAATAAGACC +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERFSSKD*GKGNKT
Trigger: GGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAA...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCATGGCCAGGCTATTGCTaGTCCTCGAGGCTGACCATC +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAWPGYC*SSRLTI
Trigger: GATGGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCA...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGATTCTGGCCAGGCTATTaGTGCTCCTCGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRFWPGY*CSSRLT
Trigger: GGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAA...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGAACTCCGGGTCAGCCTaGTGGGGAACCACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNENSGSA*WGTTSA
Trigger: AGCAGACGTGGTTCCCCAGCAGGCTGACCCGGAGTT...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTCCTTGGTGATCACCTaGTTCTCTTTCGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVSLVIT*FSFAGL
Trigger: TAAGCCAGCGAAAGAGAAGCAGGTGATCACCAAGGA...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACATATTCAAGTCGCGACTaGCAGTCATTTTCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: KRHAPLRACSASRCRIQTYSSRD*QSFSFV
Trigger: TACGAAGGAAAATGACTGGCAGTCGCGACTTGAATA...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAATGTCTTCATCGGCCCTaGCTACATGAAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMECLHRP*LHEGRS
Trigger: GCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACA...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCTCATCTGAGAGGCTGTaGTCAGGCAGGGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGSSERL*SGRGSS
Trigger: GCTCGAGCCCCTGCCTGAGCACAGCCTCTCAGATGA...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGATGGTCTTCTGGGAGCTaGTGGTGCTGGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRWSSGS*WCWTWS
Trigger: AGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCA...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACTGTACCAGCTCAGATaGCAGGAGGCTGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQLYQLR*QEAGGI
Trigger: GATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCCGAGCTTCAGGCGCTaGCTTGCCGACAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LNNKVRILRHNESCASFPPSFRR*LADSAS
Trigger: GGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGCTCGG...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCCACAGGGTCTTTTaGTTTATGTTGCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQESHRVF*FMLLSK
Trigger: TTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGATCTTTGAGGCTCATCTaGTCCGAAAGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GMSALHRSINTIGTKAERSLRLI*SERMLA
Trigger: TGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGA...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGGTCTTCCTCAGCTTTaGGCCGGGCTTCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQGLPQL*AGLRHA
Trigger: AGCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACC...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTCCTCTAGGATCTGCTaGTGCTTCCTCCGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSSRIC*CFLRRY
Trigger: GTACCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAGCTTTGACTTGGGCTTaGCGAGCCCCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAALTWA*RAPAPL
Trigger: TAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGC...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGTGGAGGAGCACTTGGTaGCGGAGTCGCTGCACGACT +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEWRSTW*RSRCTT
Trigger: AGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCA...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTCCCAGTCTCGGTCTGTaGTCCTGCTTGGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: PERPKSTTTKINPVSETFPSLGL*SCLGYG
Trigger: GCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGG...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGCTCCTCTGAGAGCATaGAGCGCTTCCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCAPLRA*SASRCR
Trigger: TCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGACACAAATACCACTaGAGGGGCTTTGAATATAGG +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKRHKYH*RGFEYR
Trigger: CCTATATTCAAAGCCCCTGCAGTGGTATTTGTGTCT...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGGGCTGAACAAAATCTaGCTTGACATTCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKGLNKI*LDILEP
Trigger: TGGTTCGAGAATGTCAAGCCAGATTTTGTTCAGCCC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTTCCGTGGATGGTCCCTaGGGGAACGGATCGAATCCG +
Preference number: 4 (lower is better)
Translates to: PERPKSTTTKINPVSETFSVDGP*GNGSNP
Trigger: CGGATTCGATCCGTTCCCCCAGGGACCATCCACGGA...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGCTCTCAGACGCATCTaGCGTGGTCTTCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRALRRI*RGLLGA
Trigger: AGCTCCCAGAAGACCACGCCAGATGCGTCTGAGAGC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCCAGATGCCAGGAGGCTaGCGGGATCCTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGQMPGG*RDPCHA
Trigger: AGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTG...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAAGGTGCCTTCACTTTGTaGTCCTGCGAGTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQGAFTL*SCELFL
Trigger: TAAGAATAACTCGCAGGACCACAAAGTGAAGGCACC...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACTGTGGCCTGTCTTTTaGGACCTTCAGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQLWPVF*DLQLRR
Trigger: CCGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCTGTGGCCTGTCTTTTaGGACCTTCAGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNELWPVF*DLQLRR
Trigger: CCGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCAGAGACACTTCCCATGTaGGTCACCACTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DSFHGENPELIQTSHGNAETLPM*VTTGLQ
Trigger: CTGGAGCCCAGTGGTGACCCACATGGGAAGTGTCTC...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAAGACATCTGAGGAGCTaGACCCCACCTCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRRHLRS*TPPPSH
Trigger: GTGTGAAGGAGGTGGGGTCCAGCTCCTCAGATGTCT...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTAGGCCGCCCGCTTCTTaGCGAGCTCATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLRPPAS*RAHLPL
Trigger: AAGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCT...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAATCAAGTTATCAGGGGTaGAGGAGCACTTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKSSYQG*RSTWCR
Trigger: CCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGA...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGGTTACGGCTCAGTATaGGCAGGGCTTCCATCGATT +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGGYGSV*AGLPSI
Trigger: AATCGATGGAAGCCCTGCCCATACTGAGCCGTAACC...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAAAGTGCATCACCTTTTaGGACAAACATGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEKCITF*DKHAQN
Trigger: ATTCTGAGCATGTTTGTCCCAAAAGGTGATGCACTT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAAGCATCAACACCATTaGGACCAAGGCAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKKHQHH*DQGRKN
Trigger: GTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGATCATTAGGCGAACACTaGCCTGGGGACTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGSLGEH*PGDLGH
Trigger: ATGTCCCAAGTCCCCAGGCCAGTGTTCGCCTAATGA...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAAAGTTATATCCTAAATaGGTAGAGCAGCTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: VATAVRATAKAASTPPSSKLYPK*VEQLVL
Trigger: TAAGACAAGCTGCTCTACCCATTTAGGATATAACTT...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAGGGCTTCGTCACGCTTaGGCTCCACCTCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKGLRHA*APPPLP
Trigger: TGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCC...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAGGTGTGCCCCCGGAATaGACGCTCTCGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKGVPPE*TLSGSV
Trigger: GACAGAACCCGAGAGCGTTCATTCCGGGGGCACACC...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCAGTAAAGCGCCCTaGACTGGCAGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGSSKAP*TGSQHH
Trigger: GTGATGCTGGCTGCCAGTTCAGGGCGCTTTACTGCT...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTACAGCTGGCCAATATaGGGGTGTCAGGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCYSWPI*GCQAMC
Trigger: GCACATTGCCTGACACCCTCATATTGGCCAGCTGTA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAATAAAGCCCACGTGTaGAAGTATGGTAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKNKAHV*KYGNRK
Trigger: CTTTCTGTTACCATACTTTCACACGTGGGCTTTATT...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAACAAGGTTAGAATTCTaGGACACAACGAAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRTRLEF*DTTKVV
Trigger: CACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGGCTGCCTAGGAAACTaGGTTTGGTCGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRGCLGN*VWSRWR
Trigger: TCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAGGCTGCCTAGGAAACTaGGTTTGGTCGCGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAGCLGN*VWSRWR
Trigger: TCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCC...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGACTGGGGAACCACGTCTaGTCTAACAATAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGLGNHV*SNNSHK
Trigger: CTTGTGGCTATTGTTAGAGCAGACGTGGTTCCCCAG...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCTCCGAGTCAGAATCCTaGCTGAGGAGAGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGSESES*LRRVHG
Trigger: GCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGA...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCTCTGGGAGCTGCTGGTaGTGGACTTGGTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGSGSCW*WTWSHS
Trigger: GCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGA...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAGGCTGGCGGGATCCTTaGCATGCTGGCTCGGACTCT +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKGWRDP*HAGSDS
Trigger: AGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCC...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCTGAGAGTACTCCTTTaGAAAGTGCTCCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCLRVLL*KVLRPE
Trigger: CTCAGGCCGGAGCACTTTGCAAAGGAGTACTCTCAG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCACAGGGTCTTTTaGTTTATGTTGCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SALHRSINTIGTKAERTQSHRVF*FMLLSK
Trigger: TTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCT...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTTCAGGATGGCCTGCTaGAGCGTACTGATGGTTTCG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCFRMAC*SVLMVS
Trigger: CGAAACCATCAGTACGCTGCAGCAGGCCATCCTGAA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCTTCACTTTGTGGTCCTaGGAGTTATTCTTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MSALHRSINTIGTKAERTFTLWS*ELFLEP
Trigger: AGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAA...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCACGAAGTGGACTGGTaGCTTCACTTTGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCHEVDW*LHFVVL
Trigger: CAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCTGAAAGAAATTTGCAACTCCGCAGGTACTCCTaGTTGATGAGCTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: NSETQRKLCKLSAERNLQLRRYS*LMSSRR
Trigger: GCGGCGCGAGCTCATCAAGCAGGAGTACCTGCGGAG...TTGCAAATTTCTTTCAGCGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCATCCTCTAGGATCTGCTaGTGCTTCCTCCGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DSFHGENPELIQTSHGNASSRIC*CFLRRY
Trigger: GTACCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGA...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGCTTTGACTTGGGCTTaGCGAGCCCCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTALTWA*RAPAPL
Trigger: TAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCTCGCTGAGAGGGTGTaGCCCCGGAATGAACGCTCT +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSLAERV*PRNERS
Trigger: AGAGCGTTCATTCCGGGGGCACACCCTCTCAGCGAG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGTGGCACCCTCTGGATaGCAGCCACAAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTVAPSG*QPQGHH
Trigger: ATGATGCCCTTGTGGCTGGCATCCAGAGGGTGCCAC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCTTGGCGCAGATCCACTaGAGGTTGGCGGCGATCTTG +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGLAQIH*RLAAIL
Trigger: CAAGATCGCCGCCAACCTGCAGTGGATCTGCGCCAA...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGACTAGGAAACTGCGTTTaGTCGCGTTGGAGATCGGTA +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGLGNCV*SRWRSV
Trigger: TACCGATCTCCAACGCGACCAAACGCAGTTTCCTAG...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGGGGAGCTGCTGGTGCTaGACTTGGTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEGSCWC*TWSHSC
Trigger: ACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCC...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGGGAGCTGCTGGTGCTaGACTTGGTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTGSCWC*TWSHSC
Trigger: ACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCACTTAGAGCCTGGCACTaGGACTGTGGGGGACTTCAT +
Preference number: 4 (lower is better)
Translates to: DSFHGENPELIQTSHGNALRAWH*DCGGLH
Trigger: ATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAG...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAAGTGGCTCCACGAAGTaGACTGGTGCCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKSGSTK*TGAFTL
Trigger: CAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCTCTACACTGGGCGTTaGGGTTTTACTTCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCLYTGR*GFTSGG
Trigger: TCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACACTTCCCATGTaGGTCACCACTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQETLPM*VTTGLQ
Trigger: CTGGAGCCCAGTGGTGACCCACATGGGAAGTGTCTC...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAAGGCCAAGGACAGGCTaGAGCCTGACTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKRPRTG*SLTESG
Trigger: GCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCT...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGAATCTTCCGGCAGCTaGTCAGTTGCAGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRESSGS*SVAAVS
Trigger: AGACACTGCTGCAACTGACCAGCTGCCGGAAGATTC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGACTTCCAATACCACTTaGAGGGAGACTTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKTSNTT*RETFDE
Trigger: CTCATCAAAAGTCTCCCTCCAAGTGGTATTGGAAGT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409386.3
CDS-3UTR TCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCACCACCTTCTCGATGCTaGTCATCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAPPSRC*SSPQCR
Trigger: CCTACACTGTGGAGATGATCAGCATCGAGAAGGTGG...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATGGGATATGGCATTGTaGATAATCGGCTTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQWDMAL*IIGLFD
Trigger: ATCAAACAAGCCGATTATTCACAATGCCATATCCCA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCATCCTCTGCGTGAGATaGGCGCTGAGAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGILCVR*ALREGF
Trigger: AAACCCCTCTCTCAGCGCTCATCTCACGCAGAGGAT...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACACAACGGGAAGTAGGGTaGCTGCCTAGCAGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTQREVG*LPSRKV
Trigger: CACCTTTCTGCTAGGCAGTCACCCTACTTCCCGTTG...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGATGTCTTCATCGGCCCTaGCTACATGAAGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRCLHRP*LHEGRS
Trigger: GCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACA...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTCACCCATGAAATCGTaGTCGGCTTCCTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSPMKS*SASSMS
Trigger: GGACATAGAGGAAGCCGAGCACGATTTCATGGGTGA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCACCACATGCAGGAATaGAGCCTTGCCGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEHHMQE*SLAELQ
Trigger: CTGAAGCTCGGCAAGGCTGCATTCCTGCATGTGGTG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACCCTTCTTCACCACATaGAGGAATGCAGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQPFFTT*RNAALP
Trigger: CGGCAAGGCTGCATTCCTGCATGTGGTGAAGAAGGG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACACCCTTCTTCACCACATaGAGGAATGCAGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTPFFTT*RNAALP
Trigger: CGGCAAGGCTGCATTCCTGCATGTGGTGAAGAAGGG...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAATTTCTCTCCAGCTCGTaGAGAGCCACAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKFLSSS*RATGSF
Trigger: AAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAA...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACATCTAGGATCTGCTGCTaGTTCCTCCGCAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTSRICC*FLRRYS
Trigger: GGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGA...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGCTCGGTCTGTGCTCCTaGTTGGGTTACGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNELGLCS*LGYGSV
Trigger: TACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAG...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACAGTGGCCACAGCAGTaGGAGCCACTGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKQWPQQ*EPLQKR
Trigger: CCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCACTG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAACCCTCATGACCGCGTaGCAGAAGTCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKTLMTA*QKSSSS
Trigger: TGAAGATGATGACTTCTGGCACGCGGTCATGAGGGT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCTGAAAACCACAGGATaGGCCTCACCCATGAAATCG +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCLKTTG*ASPMKS
Trigger: CGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATCCTCTCCGCAAAGCTaGTCATCTTCACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQSSPQS*SSSRSH
Trigger: GTGGGAGCGTGAAGATGACCAGCTTTGCGGAGAGGA...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACTTAGAGCCTGGCACTaGGACTGTGGGGGACTTCAT +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQLRAWH*DCGGLH
Trigger: ATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCACTCTACACTGGGCGTTaGGGTTTTACTTCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIALYTGR*GFTSGG
Trigger: TCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAG...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTCTACACTGGGCGTTaGGGTTTTACTTCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRLYTGR*GFTSGG
Trigger: TCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAG...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGACATGGTTTTGGCTaGGATCAAGTTAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKRHGFG*DQVKLF
Trigger: AAACAGTTTAACTTGATCCCAGCCAAAACCATGTCT...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTAGACATGGTTTTGGCTaGGATCAAGTTAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: EITAGQYEGVRQCARGRGRHGFG*DQVKLF
Trigger: AAACAGTTTAACTTGATCCCAGCCAAAACCATGTCT...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGACATGGTTTTGGCTaGGATCAAGTTAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRRHGFG*DQVKLF
Trigger: AAACAGTTTAACTTGATCCCAGCCAAAACCATGTCT...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGACATCATTTACGAGTCTaGGTCACCCTTTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRHHLRV*VTLWTP
Trigger: TGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATG...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCATCATTTACGAGTCTaGGTCACCCTTTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCHHLRV*VTLWTP
Trigger: TGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGGCACGCACCTGCTCCTaGGAATGTCCGCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LNNKVRILRHNESCASFPARTCS*ECPRST
Trigger: TGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGC...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAAAAGCAGTCCATCTTTaGTGCACGCACACAGCCATG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKKAVHL*CTHTAM
Trigger: CATGGCTGTGTGCGTGCACCAAAGATGGACTGCTTT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTTTGCTTTATGTTGCTaGGCAAAGGCCAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCFALCC*AKARLS
Trigger: AGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCTTTCTGTTCATCCTTaGAGAAGAAGCCGACCCCCG +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLLSVHP*RRSRPP
Trigger: CGGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAG...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAACCAAAACTTAATGAATaGTGGCTGCAGTTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKPKLNE*WLQLAR
Trigger: CCGAGCCAACTGCAGCCATCATTCATTAAGTTTTGG...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCAGACAGGACAAGCCGTaGCCTAACAAAACCACTGAA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCRQDKP*PNKTTE
Trigger: TTCAGTGGTTTTGTTAGGTCACGGCTTGTCCTGTCT...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGAGACTGCACCGCAGTaGCACGTGCAGAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTETAPQ*HVQKVK
Trigger: TTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCCCTGTATGGATTTCTaGTGTTTCTGTCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCPCMDF*CFCLSG
Trigger: GCCACTGAGACAGAAACAGCAGAAATCCATACAGGG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp AATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCTGAAAGAAATTTGCAATTCTGGCCAGGCTATTaGTGCTCCTCGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: NSETQRKLCKLSAERNLQFWPGY*CSSRLT
Trigger: GGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAA...TTGCAAATTTCTTTCAGCGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAATTAACAATGTTGGATaGCAAACTGTCTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEINNVG*QTVFAD
Trigger: ATCAGCAAAGACAGTTTGGCATCCAACATTGTTAAT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTCCTTGGTGATCACCTaGTTCTCTTTCGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSLVIT*FSFAGL
Trigger: TAAGCCAGCGAAAGAGAAGCAGGTGATCACCAAGGA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR GCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCTCGCCATGGAGACACTaGTCATCTGAGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSSPWRH*SSERLC
Trigger: GCACAGCCTCTCAGATGAGCAGTGTCTCCATGGCGA...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCACCACATGCAGGAATaGAGCCTTGCCGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSHHMQE*SLAELQ
Trigger: CTGAAGCTCGGCAAGGCTGCATTCCTGCATGTGGTG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTTTCAGGATGGCCTGCTaGAGCGTACTGATGGTTTCG +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLFRMAC*SVLMVS
Trigger: CGAAACCATCAGTACGCTGCAGCAGGCCATCCTGAA...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACACACGAAGTGGACTGGTaGCTTCACTTTGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTHEVDW*LHFVVL
Trigger: CAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTG...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAGAGCAGCACCATCACTaGCGTCTCTCATCAAATCCT +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAEQHHH*RLSSNP
Trigger: AGGATTTGATGAGAGACGGCAGTGATGGTGCTGCTC...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTGCAAAAGGTGTTGGCTaGGACGCAGGCCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PERPKSTTTKINPVSETFAKGVG*DAGLVF
Trigger: AAAAACCAGGCCTGCGTCCCAGCCAACACCTTTTGC...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATGGGGTCGATGCCCATaGGGAATTCTGAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQWGRCP*GILSME
Trigger: TTCCATGCTCAGAATTCCCCATGGGCATCGACCCCA...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCTGGCACTGGGACTGTaGGGGACTTCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSLALGL*GTSSEA
Trigger: AGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCCAG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGGTCATTTACGAGTCTaGGCCTTCTTTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRGHLRV*AFFGTA
Trigger: TGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TGTCCAAGCATGAAGAACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTGTGGGATATGGCATTGTaGATAATCGGCTTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: CPSMKNAGTLLSIIRRTLWDMAL*IIGLFD
Trigger: ATCAAACAAGCCGATTATTCACAATGCCATATCCCA...CAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGTTCTTCATGCTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGACTTGCCTACTTTAAATaGGGCAAACATCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGLAYFK*GKHQLL
Trigger: TAGGAGCTGATGTTTGCCTCATTTAAAGTAGGCAAG...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TGTCCAAGCATGAAGAACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTGAATAAAGCCCACGTGTaGAAGTATGGTAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: CPSMKNAGTLLSIIRRTLNKAHV*KYGNRK
Trigger: CTTTCTGTTACCATACTTTCACACGTGGGCTTTATT...CAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGTTCTTCATGCTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCAAATACAGTTTGGGCCTaGAGTCTGCTAAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: DSFHGENPELIQTSHGNANTVWA*SLLRDC
Trigger: GCAGTCTCTTAGCAGACTTCAGGCCCAAACTGTATT...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGTACTCCTTTGCAAAGTaGTCCGGCCTGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LNNKVRILRHNESCASFPYSFAK*SGLRGG
Trigger: CCCACCCCTCAGGCCGGAGCACTTTGCAAAGGAGTA...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATTTTCAGGATGGCCTaGTGCAGCGTACTGATGGTT +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAIFRMA*CSVLMV
Trigger: AACCATCAGTACGCTGCAGCAGGCCATCCTGAAAAT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCTGGGTAGAACGTATCTaGACATACATGCGTAAAATA +
Preference number: 4 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVWVERI*TYMRKI
Trigger: TATTTTACGCATGTATGTGCAGATACGTTCTACCCA...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGATCCACCATTGCCATGTaGGCACTCATTTTTATGGGT +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRSTIAM*ALIFMG
Trigger: ACCCATAAAAATGAGTGCCCACATGGCAATGGTGGA...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGGGCTGAACAAAATCTaGCTTGACATTCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCGLNKI*LDILEP
Trigger: TGGTTCGAGAATGTCAAGCCAGATTTTGTTCAGCCC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGCTCCTGAACATCCCTaGGCTGAACAAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQAPEHP*AEQNLA
Trigger: AGCCAGATTTTGTTCAGCCCAGGGATGTTCAGGAGC...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCTGGGGTCGATGCCCATaGGGAATTCTGAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSWGRCP*GILSME
Trigger: TTCCATGCTCAGAATTCCCCATGGGCATCGACCCCA...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCGCTCCCACTCGCCATaGAGACACTGCTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LNNKVRILRHNESCASFPRSHSP*RHCSSE
Trigger: CTCAGATGAGCAGTGTCTCCATGGCGAGTGGGAGCG...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCCTCCACGAAGTGGACTaGTGCCTTCACTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSLHEVD*CLHFVV
Trigger: GACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAG...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAACAGTTTCATCTGCTCTaGGCAATAATAGTGAATCAC +
Preference number: 4 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMEQFHLL*AIIVNH
Trigger: GTGATTCACTATTATTGCCCAGAGCAGATGAAACTG...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACCACCTTCTCGATGCTaGTCATCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKPPSRC*SSPQCR
Trigger: CCTACACTGTGGAGATGATCAGCATCGAGAAGGTGG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATCACAACTCGCAGCGTaGTGTAGAGCAAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQSQLAA*CRAKGV
Trigger: AACACCTTTTGCTCTACATCACGCTGCGAGTTGTGA...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAATACAGCTGGCCAATATaGGGGTGTCAGGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKYSWPI*GCQAMC
Trigger: GCACATTGCCTGACACCCTCATATTGGCCAGCTGTA...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACACCAAAACTTAATGAATaGTGGCTGCAGTTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTPKLNE*WLQLAR
Trigger: CCGAGCCAACTGCAGCCATCATTCATTAAGTTTTGG...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAAGACAGGACAAGCCGTaGCCTAACAAAACCACTGAA +
Preference number: 4 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQRQDKP*PNKTTE
Trigger: TTCAGTGGTTTTGTTAGGTCACGGCTTGTCCTGTCT...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACATCCTTGGTGATCACCTaGTTCTCTTTCGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTSLVIT*FSFAGL
Trigger: TAAGCCAGCGAAAGAGAAGCAGGTGATCACCAAGGA...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCATTTTCAGGATGGCCTaGTGCAGCGTACTGATGGTT +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGIFRMA*CSVLMV
Trigger: AACCATCAGTACGCTGCAGCAGGCCATCCTGAAAAT...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTGTTGTGGATTGTGAGTaGGTCCACACTGACAGACAT +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLVVDCE*VHTDRH
Trigger: ATGTCTGTCAGTGTGGACGCACTCACAATCCACAAC...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAGACTGTCAGCTTAAGTaGATCACCTTTTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKDCQLK*ITFWDK
Trigger: TTTGTCCCAAAAGGTGATGCACTTAAGCTGACAGTC...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGTGCTGTCGCCAGAGCTaGGATCCACTTCACAACTCG +
Preference number: 4 (lower is better)
Translates to: LNNKVRILRHNESCASFPCCRQS*DPLHNS
Trigger: CGAGTTGTGAAGTGGATCCCAGCTCTGGCGACAGCA...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTCTGCTTCTCTTTCGCTaGCTTAAGAACTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PERPKSTTTKINPVSETFLLLFR*LKNCWH
Trigger: ATGCCAGCAGTTCTTAAGCCAGCGAAAGAGAAGCAG...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTGAAAGTCTTCGGTTTTaGAAACAGCGTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLESLRF*KQRPHS
Trigger: ACTGTGGGGACGCTGTTTCCAAAACCGAAGACTTTC...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAGGAGCGTCTCTACACTaGGCGTTGGGGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKGASLH*ALGFYF
Trigger: GAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCC...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAGTGCACGCACACGTGTaGGTAGAACGTATCTGCACA +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKVHAHV*VERICT
Trigger: TGTGCAGATACGTTCTACCCACACGTGTGCGTGCAC...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR CAA 72 bp CCACACACTGACTCATTCCATGGAGAAAATCCAGAATaGATTCAGACGTCCCATGGGAATGCAATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PHTDSFHGENPE*IQTSHGNAIFQ
Trigger: CTGGAAAATTGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTCAGTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAAATAATCGGCTTGTTTaGTTTACTACTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKNNRLV*FTTGLL
Trigger: AAGGAGCCCAGTAGTAAATCAAACAAGCCGATTATT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACGATCATTTTCTTGGTaGTGTTCTTTGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKRSFSW*CSLAPC
Trigger: GCACGGGGCCAAAGAACATCACCAAGAAAATGATCG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACATTTGCAAAAGGTCTGTaGCTTTGCACACTTCGTACC +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTFAKGL*LCTLRT
Trigger: GGTACGAAGTGTGCAAAGTCACAGACCTTTTGCAAA...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRTSNLC*RRTSSK
Trigger: CTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGT...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGGAGAAAATCCAGAATTaGTTCAGACGTCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNEEKIQN*FRRPMG
Trigger: TCCCATGGGACGTCTGAATCAATTCTGGATTTTCTC...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACAGTGCAAGCTTTCCGCTaGAAGAAATTTGCAACGAGA +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTVQAFR*KKFATR
Trigger: TCTCGTTGCAAATTTCTTTCAGCGGAAAGCTTGCAC...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR GCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAATCACCCATGAAATCGTaGTCGGCTTCCTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKSPMKS*SASSMS
Trigger: GGACATAGAGGAAGCCGAGCACGATTTCATGGGTGA...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGTCTTTGAGGCTCATCTaGTCCGAAAGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNESLRLI*SERMLA
Trigger: TGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGA...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACACAACGAAAGTTGTaGAAGCTTTCCGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIATQRKL*KLSAER
Trigger: TCTTTCAGCGGAAAGCTTGCACAACTTTCGTTGTGT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACTAGGAAACTGCGTTTaGTCGCGTTGGAGATCGGTA +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKLGNCV*SRWRSV
Trigger: TACCGATCTCCAACGCGACCAAACGCAGTTTCCTAG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCTGTCCTCTCCCTGTATaGATTTCTGCTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGCPLPV*ISAVSV
Trigger: GACAGAAACAGCAGAAATCCATACAGGGAGAGGACA...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTTGGCTTAAGAACTGCTaGCATCAAAGGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLWLKNC*HQRLQE
Trigger: TTCTTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCA...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACACGGCTCTGAATCGTaGGAGTTGGGGCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKHGSES*ELGLFE
Trigger: TTCAAAAAGCCCCAACTCCCACGATTCAGAGCCGTG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGGTGCCTTCACTTTGTaGTCCTGCGAGTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: TPKKICAKLMLVAPESSGGAFTL*SCELFL
Trigger: TAAGAATAACTCGCAGGACCACAAAGTGAAGGCACC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTGCTCCGAAAGAATGTTaGCATCTTTGGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLAPKEC*HLWKRT
Trigger: TGTCCTCTTCCAAAGATGCCAACATTCTTTCGGAGC...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACAGCTCCGAAAGAATGTTaGCATCTTTGGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTAPKEC*HLWKRT
Trigger: TGTCCTCTTCCAAAGATGCCAACATTCTTTCGGAGC...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp TTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGTTCTGAAAAGCCATCCACTTACTTaGAGTTCTGAAATAACTGCA +
Preference number: 4 (lower is better)
Translates to: LGPRQKEPKAIHLLGVLKSHPLT*SSEITA
Trigger: TGCAGTTATTTCAGAACTCCAAGTAAGTGGATGGCT...TTTCAGAACTCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGTCAAAAGGACACATaGAAAGCAGTCCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIASQKDT*KAVHLW
Trigger: CCAAAGATGGACTGCTTTCCATGTGTCCTTTTGACT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR CAA 72 bp CACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTaGCAGATTTCGGTGCTTTTAGTGAACTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: HICRRCSSGRQA*QISVLLVNWCF
Trigger: AAAACACCAGTTCACTAAAAGCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR TCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCATCACGAAACAGTATaGTGTAGTGATTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLHHETV*CSDWHH
Trigger: GTGATGCCAATCACTACATCATACTGTTTCGTGATG...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACATATTCAAGTCGCGACTaGCAGTCATTTTCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTYSSRD*QSFSFV
Trigger: TACGAAGGAAAATGACTGGCAGTCGCGACTTGAATA...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTACGTCTAATCTATGCTaGAGGAGAACTTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PERPKSTTTKINPVSETFTSNLC*RRTSSK
Trigger: CTTACTTGAAGTTCTCCTTCAGCATAGATTAGACGT...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR TCA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATATCAAACATACAGTaGGAAATAAAGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAISNIQ*EIKPTC
Trigger: ACACGTGGGCTTTATTTCTCACTGTATGTTTGATAT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAATTAACAATGTTGGATaGCAAACTGTCTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRINNVG*QTVFAD
Trigger: ATCAGCAAAGACAGTTTGGCATCCAACATTGTTAAT...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTAAATAACAAGGTTAGAATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGTTAATGAATGATGGCTaGAGTTGGCTCGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LNNKVRILRHNESCASFPLMNDG*SWLGLP
Trigger: AGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAA...CGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATTCTAACCTTGTTATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTAGCAAGAAAGCAAAGTaGATCACGTCTAATCTATGC +
Preference number: 4 (lower is better)
Translates to: PERPKSTTTKINPVSETFSKKAK*ITSNLC
Trigger: GCATAGATTAGACGTGATCCACTTTGCTTTCTTGCT...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CCA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAAAAGCATCAACACCATTaGGACCAAGGCAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKKHQHH*DQGRKN
Trigger: GTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTT...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR TCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAATATCAAACATACAGTaGGAAATAAAGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTISNIQ*EIKPTC
Trigger: ACACGTGGGCTTTATTTCTCACTGTATGTTTGATAT...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAATATGGAATTCTTGTaGGGTTCGTTCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTNMEFL*GSFTFP
Trigger: TGGAAAAGTGAACGAACCCCACAAGAATTCCATATT...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAATTAACAATGTTGGATaGCAAACTGTCTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTINNVG*QTVFAD
Trigger: ATCAGCAAAGACAGTTTGGCATCCAACATTGTTAAT...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR GCA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTTCCACTTTTCAATTTTaGCTGAGTGAAGAATACAGT +
Preference number: 4 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLSTFQF*LSEEYS
Trigger: ACTGTATTCTTCACTCAGGCAAAATTGAAAAGTGGA...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389532.9
3UTR CAA 72 bp AATTTGCAACGAGACACAAATACCACTGCAGGGGCTTaGAATATAGGAGACATTGATAAACAGAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: NLQRDTNTTAGA*NIGDIDKQSYK
Trigger: CTTATAACTCTGTTTATCAATGTCTCCTATATTCAAAGCCCCTGCAGTGGTATTTGTGTCTCGTTGCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS GCA 90 bp CCGCGGCTGCTGCATGCTGCGGGCGCTGAGCCCGAGCGGAGGAGGTaGCGAGCCCGCGGCCCAAAGAGGCGGCGGCAGGAGGGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: PRLLHAAGAEPERRR*RARGPKRRRQEGAG
Trigger: GCCCGCGCCCTCCTGCCGCCGCCTCTTTGGGCCGCGGGCTCGGCACCTCCTCCGCTCGGGCTCAGCGCCCGCAGCATGCAGCAGCCGCGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS TCA 90 bp GGCGGCGGCGCGGCCGCTCGCGTCCACCATCTGCAGACAAAGGGCTaGGGCGGCGGCCCGGCCGCAACAAAGGCGCCGCCGCCCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GGGAAARVHHLQTKG*GGGPAATKAPPPLA
Trigger: GGCGAGGGGCGGCGGCGCCTTTGTTGCGGCCGGGCCGCCGCCTCAGCCCTTTGTCTGCAGATGGTGGACGCGAGCGGCCGCGCCGCCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS CCA 90 bp GGCCGTAGGCCTTGGCGCAGATCCACTGCAGGTTGGCGGCGATCTTaGCGCGCGCCGCGTCGTAGCGGTCCAGGGGCACGAGGTCGGCGG +
Preference number: 5 (lower is better)
Translates to: GRRPWRRSTAGWRRS*RAPRRSGPGARGRR
Trigger: CCGCCGACCTCGTGCCCCTGGACCGCTACGACGCGGCGCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCTGCGCCAAGGCCTACGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS GCA 90 bp CCTCCGCTTCCAGCTGCTGCTTGCGCACGCGGGCCTCCTCGGCCTTaGGCTGCTGCTTCAGGAGGAAGGCCGCCCGCTTCTTGGCGAGCT +
Preference number: 5 (lower is better)
Translates to: PPLPAAACARGPPRP*AAASGGRPPASWRA
Trigger: AGCTCGCCAAGAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp CGCCGGGCTTCGTCACGCTTGAGCTCCACCTCCGCTTCCAGCTGCTaGTTGCGCACGCGGGCCTCCTCGGCCTTGCGCTGCTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RRASSRLSSTSASSC*LRTRASSALRCCFR
Trigger: CCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp TTGCGCCGGGCTTCGTCACGCTTGAGCTCCACCTCCGCTTCCAGCTaGTGCTTGCGCACGCGGGCCTCCTCGGCCTTGCGCTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LRRASSRLSSTSASS*CLRTRASSALRCCF
Trigger: GAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCGGCGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GGATGTTATCTCGGCCGTAGGCCTTGGCGCAGATCCACTGCAGGTTaGCGGCGATCTTGGCGCGCGCCGCGTCGTAGCGGTCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: GCYLGRRPWRRSTAG*RRSWRAPRRSGPGA
Trigger: TGCCCCTGGACCGCTACGACGCGGCGCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCTGCGCCAAGGCCTACGGCCGAGATAACATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGAGTCTGGGCCTTCTTaGGCACTGCAGGCCGCTTGG +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSESGPS*ALQAAW
Trigger: CCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS GCA 90 bp GATGCCAGGAGGCTGGCGGGATCCTTGCCATGCTGGCTCGGACTCTaGTCCCTCTTCTGCCTCCACGTCGTCAGAGGGGCTGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: DARRLAGSLPCWLGL*SLFCLHVVRGAGQL
Trigger: GAGCTGCCCAGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCTGCGTTTGGTCGCGTaGGAGATCGGTACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLRLVA*EIGTGG
Trigger: GCCTCCTGTACCGATCTCCAACGCGACCAAACGCAG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGGCTTCCAGCTGCTGCTaGCGCACGCGGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLASSCC*RTRASS
Trigger: CGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGC...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCGCAGGTACTCCTGCTaGATGAGCTCGCGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLRRYSC*MSSRRA
Trigger: GGCGCGGCGCGAGCTCATCAAGCAGGAGTACCTGCG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS GCA 90 bp CTGGCGGGATCCTTGCCATGCTGGCTCGGACTCTGCTCCCTCTTCTaGCTCCACGTCGTCAGAGGGGCTGGGCAGCTCTCAGACGCATCT +
Preference number: 5 (lower is better)
Translates to: LAGSLPCWLGLCSLF*LHVVRGAGQLSDAS
Trigger: AGATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp GTGGAGGAGCACTTGGTGCCGGAGTCGCTGCACGACTCTTCCCGGTaGACCGACTTCGGCCGCGGCTTCTTCGGCTTTGACTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VEEHLVPESLHDSSR*TDFGRGFFGFDLGL
Trigger: CAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 90 bp GGCTCAAGTTATCAGGGGTGGAGGAGCACTTGGTGCCGGAGTCGCTaGACGACTCTTCCCGGTGCACCGACTTCGGCCGCGGCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: GSSYQGWRSTWCRSR*TTLPGAPTSAAASS
Trigger: CGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 90 bp AGGCCAGGGAAGATGCCGCCGACGCGGTCTCCCAGTCTCGGTCTGTaGTCCTGCTTGGGTTACGGCTCAGTATGGGCAGGGCTTCCATCG +
Preference number: 5 (lower is better)
Translates to: RPGKMPPTRSPSLGL*SCLGYGSVWAGLPS
Trigger: CGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGGCGGCATCTTCCCTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 90 bp GCTCGGACTCTGCTCCCTCTTCTGCCTCCACGTCGTCAGAGGGGCTaGGCAGCTCTCAGACGCATCTGGCGTGGTCTTCTGGGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: ARTLLPLLPPRRQRG*AALRRIWRGLLGAA
Trigger: AGCAGCTCCCAGAAGACCACGCCAGATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp CTTCCCGGTGCACCGACTTCGGCCGCGGCTTCTTCGGCTTTGACTTaGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LPGAPTSAAASSALT*ACRAPAPLGSAAAS
Trigger: GGAAGCAGCAGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCCCCCGTTCATCCTCCTaGGTGATCACCTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSPRSSS*VITCFS
Trigger: AGAGAAGCAGGTGATCACCAAGGAGGATGAACGGGG...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTCTCTACACTGGGCGTaGGGGTTTTACTTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSSLHWA*GFYFGR
Trigger: CCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCGGGCTTCGTCACGCTaGAGCTCCACCTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLRASSR*SSTSAS
Trigger: GGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCGGTCTTCCTCAGCTTaGCGCCGGGCTTCGTCACGC +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLRSSSA*RRASSR
Trigger: GCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACCG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp GCCAAGGGCCAGAGGCCCACCACAGACCTCTCCTGCGGTTTCCACTaGCAGTGGTCCTGTCTCGGTGGGGTCGATGCCCATGGGGAATTC +
Preference number: 5 (lower is better)
Translates to: AKGQRPTTDLSCGFH*QWSCLGGVDAHGEF
Trigger: GAATTCCCCATGGGCATCGACCCCACCGAGACAGGACCACTGTCAGTGGAAACCGCAGGAGAGGTCTGTGGTGGGCCTCTGGCCCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 90 bp GGTTCTGTCGTCGCCGCAGAGGCCAAGGACAGGCTGGAGCCTGACTaGGTCCGGCTCAAGTTATCAGGGGTGGAGGAGCACTTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: GSVVAAEAKDRLEPD*VRLKLSGVEEHLVP
Trigger: CGGCACCAAGTGCTCCTCCACCCCTGATAACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCTCTGCGGCGACGACAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 90 bp TGTGCAGCTGTACCAGCTCAGATGCCAGGAGGCTGGCGGGATCCTTaGCATGCTGGCTCGGACTCTGCTCCCTCTTCTGCCTCCACGTCG +
Preference number: 5 (lower is better)
Translates to: CAAVPAQMPGGWRDP*HAGSDSAPSSASTS
Trigger: CGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAGCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp CCTGCGCTTCTCCTCCAGCTGCATGTGCAGCTGTACCAGCTCAGATaGCAGGAGGCTGGCGGGATCCTTGCCATGCTGGCTCGGACTCTG +
Preference number: 5 (lower is better)
Translates to: PALLLQLHVQLYQLR*QEAGGILAMLARTL
Trigger: CAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAGCTGCACATGCAGCTGGAGGAGAAGCGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp GGCTTTGACTTGGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGCTaGTGCTTCCTCCGCAGGTACTCCTGCTTGATGAGCTCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GFDLGLPSPCSSRIC*CFLRRYSCLMSSRR
Trigger: GCGGCGCGAGCTCATCAAGCAGGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS-3UTR CAA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAAGGGGCAGCCTCGGCCTaGCCCTTCTTCACCACATGC +
Preference number: 5 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQGAASA*PFFTTC
Trigger: GCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCCC...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACGGGCTTCGTCACGCTaGAGCTCCACCTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQRASSR*SSTSAS
Trigger: GGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCG...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAAGTCTGGGTCACCCTTaGGACGCCAGCTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: VATAVRATAKAASTPPSSSLGHP*DASCTG
Trigger: CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACT...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp CTCGGGTTCTGTCGTCGCCGCAGAGGCCAAGGACAGGCTGGAGCCTaGCTGAGTCCGGCTCAAGTTATCAGGGGTGGAGGAGCACTTGGT +
Preference number: 5 (lower is better)
Translates to: LGFCRRRRGQGQAGA*LSPAQVIRGGGALG
Trigger: ACCAAGTGCTCCTCCACCCCTGATAACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCTCTGCGGCGACGACAGAACCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 90 bp AGCTGTACCAGCTCAGATGCCAGGAGGCTGGCGGGATCCTTGCCATaGTGGCTCGGACTCTGCTCCCTCTTCTGCCTCCACGTCGTCAGA +
Preference number: 5 (lower is better)
Translates to: SCTSSDARRLAGSLP*WLGLCSLFCLHVVR
Trigger: TCTGACGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp GGGAAGATGCCGCCGACGCGGTCTCCCAGTCTCGGTCTGTGCTCCTaGTTGGGTTACGGCTCAGTATGGGCAGGGCTTCCATCGATTCCA +
Preference number: 5 (lower is better)
Translates to: GKMPPTRSPSLGLCS*LGYGSVWAGLPSIP
Trigger: TGGAATCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGGCGGCATCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS GCA 90 bp CAGCAGTTCCTTTCCCGCACAGGCTGCTGGGTGCAGACAACAGGGTaGAGACAGCAGGTCACAGAGCAGCGTGTACACGGGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: QQFLSRTGCWVQTTG*RQQVTEQRVHGHQH
Trigger: GTGCTGGTGCCCGTGTACACGCTGCTCTGTGACCTGCTGTCTGCACCCTGTTGTCTGCACCCAGCAGCCTGTGCGGGAAAGGAACTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS CCA 90 bp GTCTTCATCGGCCCTGCCTACATGAAGGAAGAAGCCATCCGTGGATaGTCCCTGGGGGAACGGATCGAATCCGCCAAGGGCCAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: VFIGPAYMKEEAIRG*SLGERIESAKGQRP
Trigger: GGGCCTCTGGCCCTTGGCGGATTCGATCCGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp CCTCCAGCTGCATGTGCAGCTGTACCAGCTCAGATGCCAGGAGGCTaGCGGGATCCTTGCCATGCTGGCTCGGACTCTGCTCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PPAACAAVPAQMPGG*RDPCHAGSDSAPSS
Trigger: AGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAGCTGCACATGCAGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GGCTGCTGGCAGGGAAGGGTCTCAAGTGCGGGAGCGTCTCTACACTaGGCGTTGGGGTTTTACTTCGGGAGGAGCCCTGTGGCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GCWQGRVSSAGASLH*ALGFYFGRSPVACL
Trigger: AAGACAGGCCACAGGGCTCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCCTGCCAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp AGATGCCGCCGACGCGGTCTCCCAGTCTCGGTCTGTGCTCCTGCTTaGGTTACGGCTCAGTATGGGCAGGGCTTCCATCGATTCCACTCG +
Preference number: 5 (lower is better)
Translates to: RCRRRGLPVSVCAPA*VTAQYGQGFHRFHS
Trigger: CGAGTGGAATCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGGCGGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 90 bp CAACAGACACGCAAAGACCGAAGGGAGGACGCCAAGTGTCCACGCTaGCCCCATGTGAGGGACGGCTCAGCCTCGAGCCATTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QQTRKDRREDAKCPR*PHVRDGSASSHSPH
Trigger: GTGAGGAGAATGGCTCGAGGCTGAGCCGTCCCTCACATGGGGCCAGCGTGGACACTTGGCGTCCTCCCTTCGGTCTTTGCGTGTCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCAGAAAGTCTTCGGTTTaGGAAACAGCGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSRKSSV*ETASPQ
Trigger: CTGTGGGGACGCTGTTTCCAAAACCGAAGACTTTCT...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGCATCCAGAACTTCTTaGAGGCTCATCTGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSASRTS*RLICSE
Trigger: TTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGGGCACTGCAGGCCGCTaGGGCTGCCACAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKGTAGR*GCHRWL
Trigger: CAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCC...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAGAGTCTGGGCCTTCTTaGGCACTGCAGGCCGCTTGG +
Preference number: 5 (lower is better)
Translates to: WLARTCSWECPRSTEASTESGPS*ALQAAW
Trigger: CCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTC...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS GCA 90 bp TTCGGCTTTGACTTGGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTaGTGCTGCTTCCTCCGCAGGTACTCCTGCTTGATGAGCTCGCGC +
Preference number: 5 (lower is better)
Translates to: FGFDLGLPSPCSSRI*CCFLRRYSCLMSSR
Trigger: GCGCGAGCTCATCAAGCAGGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 90 bp CCAGCTGCACCGGGGTCATTTACGAGTCTGGGCCTTCTTTGGCACTaGAGGCCGCTTGGGCTGCCACAGGTGGTTGTGGATTGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: PAAPGSFTSLGLLWH*RPLGLPQVVVDCEC
Trigger: GCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACCCCGGTGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GGGTCCCTGCAGCAGGGCTGCCTAGGAAACTGCGTTTGGTCGCGTTaGAGATCGGTACAGGAGGCCGGCTGCTCTTCTGGTGTAACACTG +
Preference number: 5 (lower is better)
Translates to: GSLQQGCLGNCVWSR*RSVQEAGCSSGVTL
Trigger: CAGTGTTACACCAGAAGAGCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCCCTGCTGCAGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS CCA 90 bp CGGTGTCTTCATCGGCCCTGCCTACATGAAGGAAGAAGCCATCCGTaGATGGTCCCTGGGGGAACGGATCGAATCCGCCAAGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RCLHRPCLHEGRSHP*MVPGGTDRIRQGPE
Trigger: CTCTGGCCCTTGGCGGATTCGATCCGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GGCAGGGAAGGGTCTCAAGTGCGGGAGCGTCTCTACACTGGGCGTTaGGGTTTTACTTCGGGAGGAGCCCTGTGGCCTGTCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GREGSQVRERLYTGR*GFTSGGALWPVFWD
Trigger: GTCCCAAAAGACAGGCCACAGGGCTCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp TCTCCCAGTCTCGGTCTGTGCTCCTGCTTGGGTTACGGCTCAGTATaGGCAGGGCTTCCATCGATTCCACTCGCTGAGAGGGTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SPSLGLCSCLGYGSV*AGLPSIPLAERVCP
Trigger: GGGGCACACCCTCTCAGCGAGTGGAATCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 90 bp TGGACGCCAGCTGCACCGGGGTCATTTACGAGTCTGGGCCTTCTTTaGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTTGTGGATTGT +
Preference number: 5 (lower is better)
Translates to: WTPAAPGSFTSLGLL*HCRPLGLPQVVVDC
Trigger: ACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACCCCGGTGCAGCTGGCGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACTGCGTTTGGTCGCGTaGGAGATCGGTACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VATAVRATAKAASTPPSSLRLVA*EIGTGG
Trigger: GCCTCCTGTACCGATCTCCAACGCGACCAAACGCAG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGAGGCTGGCGGGATCCTaGCCATGCTGGCTCGGACTC +
Preference number: 5 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKRLAGS*PCWLGL
Trigger: GAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCT...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAACGGGCCTCCTCGGCCTaGCGCTGCTGCTTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQRASSA*RCCFRR
Trigger: CCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCG...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGCTTCCAGCTGCTGCTaGCGCACGCGGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKASSCC*RTRASS
Trigger: CGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAACGGTCTTCCTCAGCTTaGCGCCGGGCTTCGTCACGC +
Preference number: 5 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPERSSSA*RRASSR
Trigger: GCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACCG...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACGCAGGTACTCCTGCTaGATGAGCTCGCGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRRRYSC*MSSRRA
Trigger: GGCGCGGCGCGAGCTCATCAAGCAGGAGTACCTGCG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACAGGCACTGCAGGCCGCTaGGGCTGCCACAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: KRHAPLRACSASRCRIQTGTAGR*GCHRWL
Trigger: CAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCC...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGGCACTGCAGGCCGCTaGGGCTGCCACAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKGTAGR*GCHRWL
Trigger: CAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS TCA 90 bp CTCGGGTTCTGTCGTCGCCGCAGAGGCCAAGGACAGGCTGGAGCCTaGCTGAGTCCGGCTCAAGTTATCAGCTGCCAGAGACAGAAACAG +
Preference number: 5 (lower is better)
Translates to: LGFCRRRRGQGQAGA*LSPAQVISCQRQKQ
Trigger: CTGTTTCTGTCTCTGGCAGCTGATAACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCTCTGCGGCGACGACAGAACCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487868.1
CDS GCA 90 bp GCCAGCCACGCCCGTGGGAGAGAGTGGCTCCACGAAGTGGACTGGTaGCTTCACTTTGTGGTCCTGCGAGTTATTCTTAGAGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ASHARGREWLHEVDW*LHFVVLRVILRAWH
Trigger: GTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GTGGCCAGCCACGCCCGTGGGAGAGAGTGGCTCCACGAAGTGGACTaGTGCCTTCACTTTGTGGTCCTGCGAGTTATTCTTAGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VASHARGREWLHEVD*CLHFVVLRVILRAW
Trigger: CCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAATTTCTGGCCAGGCTATaGCTGCTCCTCGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQFLARL*LLLEAD
Trigger: GTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAAA...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCATTTCTGGCCAGGCTATaGCTGCTCCTCGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: VATAVRATAKAASTPPSSFLARL*LLLEAD
Trigger: GTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAAA...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCTGCTGGTGCTGGACTaGGTCTCACAGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLLLVLD*VSQLLS
Trigger: ACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTAGGCTGGCGGGATCCTaGCCATGCTGGCTCGGACTC +
Preference number: 5 (lower is better)
Translates to: EITAGQYEGVRQCARGRGRLAGS*PCWLGL
Trigger: GAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCT...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGGGGCAGCCTCGGCCTaGCCCTTCTTCACCACATGC +
Preference number: 5 (lower is better)
Translates to: EITAGQYEGVRQCARGRGGAASA*PFFTTC
Trigger: GCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCCC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGCGGGCTTCGTCACGCTaGAGCTCCACCTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKRASSR*SSTSAS
Trigger: GGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCG...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAACGCAGGTACTCCTGCTaGATGAGCTCGCGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: SALHRSINTIGTKAERTQRRYSC*MSSRRA
Trigger: GGCGCGGCGCGAGCTCATCAAGCAGGAGTACCTGCG...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAGGTCTGTGCTCCTGCTaGGGTTACGGCTCAGTATGG +
Preference number: 5 (lower is better)
Translates to: VATAVRATAKAASTPPSSGLCSC*GYGSVW
Trigger: CCATACTGAGCCGTAACCCAAGCAGGAGCACAGACC...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCTTGTCGATCATTTTCTaGGTGATGTTCTTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSLSIIF*VMFFGP
Trigger: GGGGCCAAAGAACATCACCAAGAAAATGATCGACAA...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACAGATCCACTGCAGGTaGGCGGCGATCTTGGCGCGC +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEQIHCR*AAILAR
Trigger: GCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCTG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp GGTTCTGTCGTCGCCGCAGAGGCCAAGGACAGGCTGGAGCCTGACTaGGTCCGGCTCAAGTTATCAGCTGCCAGAGACAGAAACAGACGA +
Preference number: 5 (lower is better)
Translates to: GSVVAAEAKDRLEPD*VRLKLSAARDRNRR
Trigger: TCGTCTGTTTCTGTCTCTGGCAGCTGATAACTTGAGCCGGACTCAGTCAGGCTCCAGCCTGTCCTTGGCCTCTGCGGCGACGACAGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487868.1
CDS CCA 90 bp CTATTCAAGTCGCGACTGCCAGTCATTTTCCTTCGTACCAAAGGCTaGGGGCCCTCGCTGGGCCTCCTAGACACGATGCTCCTCGGTCTC +
Preference number: 5 (lower is better)
Translates to: LFKSRLPVIFLRTKG*GPSLGLLDTMLLGL
Trigger: GAGACCGAGGAGCATCGTGTCTAGGAGGCCCAGCGAGGGCCCCCAGCCTTTGGTACGAAGGAAAATGACTGGCAGTCGCGACTTGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GCTTTCATCATGGAGCCTGTAACTGTCGAAGAGACACTTCCCATGTaGGTCACCACTGGGCTCCAGGGCACTGTCCAGGCCAGGGTCCGT +
Preference number: 5 (lower is better)
Translates to: AFIMEPVTVEETLPM*VTTGLQGTVQARVR
Trigger: ACGGACCCTGGCCTGGACAGTGCCCTGGAGCCCAGTGGTGACCCACATGGGAAGTGTCTCTTCGACAGTTACAGGCTCCATGATGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GCCTTCTTTGGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTTGTaGATTGTGAGTGCGTCCACACTGACAGACATGGTTTTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: AFFGTAGRLGCHRWL*IVSASTLTDMVLAG
Trigger: CCCAGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCCTCAATACTGACATaGCTCAGGAGGCTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSSILT*LRRLFP
Trigger: CGGGAAGAGCCTCCTGAGCAATGTCAGTATTGAGGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGGTGTCCAGCTGTCCTaGGGGAGACCGGGCATTTGC +
Preference number: 5 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRGVQLS*GRPGIC
Trigger: GCAAATGCCCGGTCTCCCCAAGGACAGCTGGACACC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGCCGCTGGCGTCATCTTaGTCTTCATGTTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLPLASS*SSCSFT
Trigger: GGTGAAGGAACATGAAGACAAAGATGACGCCAGCGG...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGCTTCAGGCGCTGCCTaGCCGACAGCGCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQASGAA*PTAPPS
Trigger: AGATGGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGGGGCAGCCTCGGCCTaGCCCTTCTTCACCACATGC +
Preference number: 5 (lower is better)
Translates to: GMSALHRSINTIGTKAERGAASA*PFFTTC
Trigger: GCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCCC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACCTGTGGCCTGTCTTTaGGGACCTTCAGCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRPVACL*GPSAPP
Trigger: CGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAGG...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAGGCTTTGACTTGGGCTaGCCGAGCCCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LQLANMRVSGNVQGGEVRGFDLG*PSPCSS
Trigger: AGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCC...TCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACACCCCAAGCCAAGATaGAGCCTCAGTCCCATAGTC +
Preference number: 5 (lower is better)
Translates to: VATAVRATAKAASTPPSSHPKPR*SLSPIV
Trigger: GACTATGGGACTGAGGCTCAATCTTGGCTTGGGGTG...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS GCA 90 bp TCGTGCTCGGCTTCCTCTATGTCCACCACATCCGAGTCAGAATCCTaGCTGAGGAGAGTCCACGGCTCTGAATCGTGGGAGTTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SCSASSMSTTSESES*LRRVHGSESWELGL
Trigger: AAGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGATGTGGTGGACATAGAGGAAGCCGAGCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp TGGGAGCTGCTGGTGCTGGACTTGGTCTCACAGCTGTTGAGTCTCTaGAGCTTCCTCTCCGCAAAGCTGGTCATCTTCACGCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: WELLVLDLVSQLLSL*SFLSAKLVIFTLPL
Trigger: GAGTGGGAGCGTGAAGATGACCAGCTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GTGGGAGAGAGTGGCTCCACGAAGTGGACTGGTGCCTTCACTTTGTaGTCCTGCGAGTTATTCTTAGAGCCTGGCACTGGGACTGTGGGG +
Preference number: 5 (lower is better)
Translates to: VGESGSTKWTGAFTL*SCELFLEPGTGTVG
Trigger: CCCCACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp GTCTGGGCCTTCTTTGGCACTGCAGGCCGCTTGGGCTGCCACAGGTaGTTGTGGATTGTGAGTGCGTCCACACTGACAGACATGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VWAFFGTAGRLGCHR*LWIVSASTLTDMVL
Trigger: CAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGGATGCCAAACTGTCTTaGCTGATGGAGCGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGDAKLS*LMERAK
Trigger: CTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATC...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CGTGGCCCGGGACCTGGCTGTGAACACCCTCCGCTGGGAGCCTCAGTGGTCAGCGTCAGATTAACAATGTaGGATGCCAAACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RGPGPGCEHPPLGASVVSVRLTM*DAKLSL
Trigger: CAAAGACAGTTTGGCATCCAACATTGTTAATCTGAC...GCTGACCACTGAGGCTCCCAGCGGAGGGTGTTCACAGCCAGGTCCCGGGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAATGTCCTCCTGCAGTTaGGCCGACTCTTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEMSSCS*ADSSSP
Trigger: TGGGGAGGAAGAGTCGGCCAAACTGCAGGAGGACAT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAAGGCCGCCCGCTTCTaGGCGAGCTCATCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKKAARF*ASSSSA
Trigger: AGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCTT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGATTGTCGATCATTTTCTaGGTGATGTTCTTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRLSIIF*VMFFGP
Trigger: GGGGCCAAAGAACATCACCAAGAAAATGATCGACAA...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGAGTCTGGGCCTTCTTaGGCACTGCAGGCCGCTTGG +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKESGPS*ALQAAW
Trigger: CCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp GCTCGGCTTCCTCTATGTCCACCACATCCGAGTCAGAATCCTGCCTaGGGAGAGTCCACGGCTCTGAATCGTGGGAGTTGGGGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: ARLPLCPPHPSQNPA*GESTALNRGSWGFL
Trigger: CAAAAAGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGATGTGGTGGACATAGAGGAAGCCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 90 bp TGGTCTTCTGGGAGCTGCTGGTGCTGGACTTGGTCTCACAGCTGTTaGGTCTCTGGAGCTTCCTCTCCGCAAAGCTGGTCATCTTCACGC +
Preference number: 5 (lower is better)
Translates to: WSSGSCWCWTWSHSC*VSGASSPQSWSSSR
Trigger: GCGTGAAGATGACCAGCTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp GAGAGTGGCTCCACGAAGTGGACTGGTGCCTTCACTTTGTGGTCCTaGGAGTTATTCTTAGAGCCTGGCACTGGGACTGTGGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: ESGSTKWTGAFTLWS*ELFLEPGTGTVGDF
Trigger: GAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAATGTCCTCCTGCAGTTaGGCCGACTCTTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEMSSCS*ADSSSP
Trigger: TGGGGAGGAAGAGTCGGCCAAACTGCAGGAGGACAT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCTGCTGGTGCTGGACTaGGTCTCACAGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: TAGQYEGVRQCARGRGEKLLVLD*VSQLLS
Trigger: ACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAG...CTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCGGGCCTCCTCGGCCTaGCGCTGCTGCTTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCRASSA*RCCFRR
Trigger: CCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GGGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGGGTCTGTGCTCCTGCTaGGGTTACGGCTCAGTATGG +
Preference number: 5 (lower is better)
Translates to: GNVRAPQKHQHHWDQGRKGLCSC*GYGSVW
Trigger: CCATACTGAGCCGTAACCCAAGCAGGAGCACAGACC...CTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGGCTCCTTAAAGAGCTaGGGACCTGTGTACTCGGCC +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEGSLKS*GPVYSA
Trigger: GGCCGAGTACACAGGTCCCAAGCTCTTTAAGGAGCC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp CTGATGCTGTCGCCAGAGCTGGGATCCACTTCACAACTCGCAGCGTaGTGTAGAGCAAAAGGTGTTGGCTGGGACGCAGGCCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LMLSPELGSTSQLAA*CRAKGVGWDAGLVF
Trigger: AAAAACCAGGCCTGCGTCCCAGCCAACACCTTTTGCTCTACATCACGCTGCGAGTTGTGAAGTGGATCCCAGCTCTGGCGACAGCATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 90 bp CTAACATATAACCTTCCCTCGGTGTCTTCATCGGCCCTGCCTACATaGAGGAAGAAGCCATCCGTGGATGGTCCCTGGGGGAACGGATCG +
Preference number: 5 (lower is better)
Translates to: LTYNLPSVSSSALPT*RKKPSVDGPWGNGS
Trigger: CGATCCGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACACCGAGGGAAGGTTATATGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 90 bp GGCACTGGGACTGTGGGGGACTTCATCAGAAGCTGCTCTTGCTGCTaGGAGATTTTCAGGATGGCCTGCTGCAGCGTACTGATGGTTTCG +
Preference number: 5 (lower is better)
Translates to: GTGTVGDFIRSCSCC*EIFRMACCSVLMVS
Trigger: CGAAACCATCAGTACGCTGCAGCAGGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCTTTCTGGCCAGGCTATaGCTGCTCCTCGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: MSALHRSINTIGTKAERTFLARL*LLLEAD
Trigger: GTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAAA...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CTGGCAGCCATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAGTCAGATTAACAATGTaGGATGCCAAACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LAAMAGTHLLLGMSALHRVRLTM*DAKLSL
Trigger: CAAAGACAGTTTGGCATCCAACATTGTTAATCTGAC...TCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACCCCGTTCATCCTCCTaGGTGATCACCTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: KRHAPLRACSASRCRIQTPRSSS*VITCFS
Trigger: AGAGAAGCAGGTGATCACCAAGGAGGATGAACGGGG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCACCCTGCCTGTCTGAATCGTGGGAGTaGGGGCTTTTTGAACAACTA +
Preference number: 5 (lower is better)
Translates to: AVRATAKAASTPPSSPCLSESWE*GLFEQL
Trigger: TAGTTGTTCAAAAAGCCCCAACTCCCACGATTCAGA...CAGGCAGGGTGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GTGGCCACAGCAGTGCGAGCCACTGCAAAAGCGGCATCTACTCCCCCATCCTCAGTCTTTTGCTTTATGTaGCTGAGCAAAGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: VATAVRATAKAASTPPSSVFCFM*LSKGQA
Trigger: AGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGAC...TGAGGATGGGGGAGTAGATGCCGCTTTTGCAGTGGCTCGCACTGCTGTGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAACAGAGCCACAGGGTCTTTaGCTTTATGTTGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: WLARTCSWECPRSTEASTEPQGL*LYVAEQ
Trigger: TTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTC...TGTTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGACTGGTGCCTTCACTTaGTGGTCCTGCGAGTTATTC +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGTGAFT*WSCELF
Trigger: GAATAACTCGCAGGACCACAAAGTGAAGGCACCAGT...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACATCTCTACACTGGGCGTaGGGGTTTTACTTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: KRHAPLRACSASRCRIQTSLHWA*GFYFGR
Trigger: CCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGA...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGGCATCCAGAACTTCTTaGAGGCTCATCTGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGASRTS*RLICSE
Trigger: TTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGC...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACGGGCCTCCTCGGCCTaGCGCTGCTGCTTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRRASSA*RCCFRR
Trigger: CCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCG...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGGGGTGGAGGAGCACTaGGTGCCGGAGTCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCGVEEH*VPESLH
Trigger: GTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAAGGCTCCTTAAAGAGCTaGGGACCTGTGTACTCGGCC +
Preference number: 5 (lower is better)
Translates to: SALHRSINTIGTKAERTQGSLKS*GPVYSA
Trigger: GGCCGAGTACACAGGTCCCAAGCTCTTTAAGGAGCC...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCGGCTGCCACAGGTGGTaGTGGATTGTGAGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVGCHRW*WIVSAS
Trigger: GGACGCACTCACAATCCACAACCACCTGTGGCAGCC...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCACTGGCCTGGGGACTaGGGACATCAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: MSALHRSINTIGTKAERTHWPGD*GHQECP
Trigger: TGGACATTCCTGATGTCCCAAGTCCCCAGGCCAGTG...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS TCA 90 bp ATCACTGCCGTCTCTCATCAAATCCTCCAACAACGGGAAGTAGGGTaGCTGCCTAGCAGAAAGGTGCTCTCGTCGATAGCGGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: ITAVSHQILQQREVG*LPSRKVLSSIADRH
Trigger: GTGCCTGTCCGCTATCGACGAGAGCACCTTTCTGCTAGGCAGTCACCCTACTTCCCGTTGTTGGAGGATTTGATGAGAGACGGCAGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409386.3
CDS GCA 90 bp GGAAACTGCGTTTGGTCGCGTTGGAGATCGGTACAGGAGGCCGGCTaGTCTTCTGGTGTAACACTGTTTTCGCGTCTTTCAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GNCVWSRWRSVQEAG*SSGVTLFSRLSAPE
Trigger: TTCAGGAGCTGAAAGACGCGAAAACAGTGTTACACCAGAAGAGCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS GCA 90 bp CGTGGGGTGTGGCTGGTTCTGTGGGGTCAGATTAACAATGTTGGATaGCAAACTGTCTTTGCTGATGGAGCGGGCCAAGCTGATGCTGTC +
Preference number: 5 (lower is better)
Translates to: RGVWLVLWGQINNVG*QTVFADGAGQADAV
Trigger: GACAGCATCAGCTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATCCAACATTGTTAATCTGACCCCACAGAACCAGCCACACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp CACTGCAGGCCGCTTGGGCTGCCACAGGTGGTTGTGGATTGTGAGTaGGTCCACACTGACAGACATGGTTTTGGCTGGGATCAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: HCRPLGLPQVVVDCE*VHTDRHGFGWDQVK
Trigger: TTTAACTTGATCCCAGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp TTGGCCGACTCTTCCTCCCCAATGTATCTGCTGAAAACCACAGGATaGGCCTCACCCATGAAATCGTGCTCGGCTTCCTCTATGTCCACC +
Preference number: 5 (lower is better)
Translates to: LADSSSPMYLLKTTG*ASPMKSCSASSMST
Trigger: GGTGGACATAGAGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAGCAGATACATTGGGGAGGAAGAGTCGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp CAAGTGATCGCGACAGGATGGCTCTGTAGATGGCAGCTGGCGGCTTaGGGTTCACTTACAGGCACTAACTTCCAATACCACTTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: QVIATGWLCRWQLAA*GSLTGTNFQYHLEG
Trigger: TCCCTCCAAGTGGTATTGGAAGTTAGTGCCTGTAAGTGAACCCCAAGCCGCCAGCTGCCATCTACAGAGCCATCCTGTCGCGATCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468150.1
CDS-3UTR CAA 90 bp GCTAAGAGACTGCACCGCAGTGACACGTGCAGAAAGTCAAAAGGACACATGGAACTGCGTTTGGTCGCGTaGGAGATCGGTACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: AKRLHRSDTCRKSKGHMELRLVA*EIGTGG
Trigger: GCCTCCTGTACCGATCTCCAACGCGACCAAACGCAG...TTCCATGTGTCCTTTTGACTTTCTGCACGTGTCACTGCGGTGCAGTCTCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGCCTAGGAAACTGCGTTaGGTCGCGTTGGAGATCGGT +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKPRKLR*VALEIG
Trigger: ACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGG...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACCGCTGGCGTCATCTTaGTCTTCATGTTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEPLASS*SSCSFT
Trigger: GGTGAAGGAACATGAAGACAAAGATGACGCCAGCGG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTCCGCTGGCGTCATCTTaGTCTTCATGTTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: EITAGQYEGVRQCARGRGPLASS*SSCSFT
Trigger: GGTGAAGGAACATGAAGACAAAGATGACGCCAGCGG...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGCTTCAGGCGCTGCCTaGCCGACAGCGCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCASGAA*PTAPPS
Trigger: AGATGGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGGAGCCACAGGGTCTTTaGCTTTATGTTGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGEPQGL*LYVAEQ
Trigger: TTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTC...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGCATCAGAAGCTGCTCTaGCTGCTGAGAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGHQKLL*LLRDFQ
Trigger: CTGAAAATCTCTCAGCAGCAAGAGCAGCTTCTGATG...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAAAGGCCGCCCGCTTCTaGGCGAGCTCATCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGKAARF*ASSSSA
Trigger: AGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCTT...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACAGCTTCCAGCTGCTGCTaGCGCACGCGGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTASSCC*RTRASS
Trigger: CGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGC...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGAGGGGTGGAGGAGCACTaGGTGCCGGAGTCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRGVEEH*VPESLH
Trigger: GTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCC...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCAGTCTGGGTCACCCTTaGGACGCCAGCTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCSLGHP*DASCTG
Trigger: CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACT...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp CTTAGAAAGCCTTTCCCCAAACTCTCACGCCCGTCCCTGGGATTCTaGCTCCACAGGCTCTTCCAAGAACTCTGCTGTGCGAGAAACATG +
Preference number: 5 (lower is better)
Translates to: LRKPFPKLSRPSLGF*LHRLFQELCCARNM
Trigger: CATGTTTCTCGCACAGCAGAGTTCTTGGAAGAGCCTGTGGAGTCAGAATCCCAGGGACGGGCGTGAGAGTTTGGGGAAAGGCTTTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS TCA 90 bp ATTTCTGCTGTTTCTGTCTCAGTGGCAATAAAGGATGGGATGGGCTaGAGGCAGCAGTTCCTTTCCCGCACAGGCTGCTGGGTGCAGACA +
Preference number: 5 (lower is better)
Translates to: ISAVSVSVAIKDGMG*RQQFLSRTGCWVQT
Trigger: TGTCTGCACCCAGCAGCCTGTGCGGGAAAGGAACTGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACTGAGACAGAAACAGCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS CCA 90 bp TGCCTTCACTTTGTGGTCCTGCGAGTTATTCTTAGAGCCTGGCACTaGGACTGTGGGGGACTTCATCAGAAGCTGCTCTTGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: CLHFVVLRVILRAWH*DCGGLHQKLLLLLR
Trigger: TCTCAGCAGCAAGAGCAGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCGATGCCAAACTGTCTTaGCTGATGGAGCGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVDAKLS*LMERAK
Trigger: CTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATC...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTCCTCAATACTGACATaGCTCAGGAGGCTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKSSILT*LRRLFP
Trigger: CGGGAAGAGCCTCCTGAGCAATGTCAGTATTGAGGA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATCCTCAATACTGACATaGCTCAGGAGGCTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQSSILT*LRRLFP
Trigger: CGGGAAGAGCCTCCTGAGCAATGTCAGTATTGAGGA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTCTGAATCGTGGGAGTaGGGGCTTTTTGAACAACTA +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSESWE*GLFEQL
Trigger: TAGTTGTTCAAAAAGCCCCAACTCCCACGATTCAGA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTTGGTCTCACAGCTGTaGAGTCTCTGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKLVSQL*SLWSFL
Trigger: GAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAACTGGTGCCTTCACTTaGTGGTCCTGCGAGTTATTC +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQETGAFT*WSCELF
Trigger: GAATAACTCGCAGGACCACAAAGTGAAGGCACCAGT...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGACCTGTGGCCTGTCTTTaGGGACCTTCAGCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRPVACL*GPSAPP
Trigger: CGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAGG...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGCTTTCTGTTCATCCTaGAAGAAGAAGCCGACCCCC +
Preference number: 5 (lower is better)
Translates to: GMSALHRSINTIGTKAERAFCSS*KKKPTP
Trigger: GGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAGC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAAGCTTTCTGTTCATCCTaGAAGAAGAAGCCGACCCCC +
Preference number: 5 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQAFCSS*KKKPTP
Trigger: GGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAGC...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAAAGGCCGCCCGCTTCTaGGCGAGCTCATCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRKAARF*ASSSSA
Trigger: AGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCTT...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAGGCTTTGACTTGGGCTaGCCGAGCCCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRGFDLG*PSPCSS
Trigger: AGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCC...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTGGGGTGGAGGAGCACTaGGTGCCGGAGTCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLGVEEH*VPESLH
Trigger: GTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCC...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS TCA 90 bp AGGAGCTGGACCCCACCTCCTTCACACTCGCATCCAGAACTTCTTTaGGGCTCATCTGCTCCGAAAGAATGTTGGCATCTTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RSWTPPPSHSHPELL*GSSAPKECWHLWKR
Trigger: CCTCTTCCAAAGATGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGCGAGTGTGAAGGAGGTGGGGTCCAGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 90 bp ATCACTGCCGTCTCTCATCAAATCCTCCAACAACGGGAAGTAGGGTaGCTGCCTAGCAGAAAGGTGCTCTCGTCGATAGCGGACCTTTTG +
Preference number: 5 (lower is better)
Translates to: ITAVSHQILQQREVG*LPSRKVLSSIADLL
Trigger: CAAAAGGTCCGCTATCGACGAGAGCACCTTTCTGCTAGGCAGTCACCCTACTTCCCGTTGTTGGAGGATTTGATGAGAGACGGCAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS TCA 90 bp GGCTCAAGTTATCAGCTGCCAGAGACAGAAACAGACGACGGTTCATaGACGGATTCCGACAGACAAGTACCTGTCCCCTGTACCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GSSYQLPETETDDGS*TDSDRQVPVPCTCS
Trigger: GGAACAGGTACAGGGGACAGGTACTTGTCTGTCGGAATCCGTTCATGAACCGTCGTCTGTTTCTGTCTCTGGCAGCTGATAACTTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487868.1
CDS GCA 90 bp ATGTATCTGCTGAAAACCACAGGATGGGCCTCACCCATGAAATCGTaGTCGGCTTCCTCTATGTCCACCACATCCGAGTCAGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: MYLLKTTGWASPMKS*SASSMSTTSESESC
Trigger: GCAGGATTCTGACTCGGATGTGGTGGACATAGAGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAGCAGATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp TTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAGCTTCAGGCGCTGCCTaGCCGACAGCGCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: FSSLFTGQRAAVSNTIYTASGAA*PTAPPS
Trigger: AGATGGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGC...TGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAGAAAGTCTTCGGTTTaGGAAACAGCGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKRKSSV*ETASPQ
Trigger: CTGTGGGGACGCTGTTTCCAAAACCGAAGACTTTCT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp AAACGGCACGCTCCTCTGAGAGCATGCAGCGCTTCCAGATGCAGAATCCAGACACATCAGAAGCTGCTCTaGCTGCTGAGAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: KRHAPLRACSASRCRIQTHQKLL*LLRDFQ
Trigger: CTGAAAATCTCTCAGCAGCAAGAGCAGCTTCTGATG...TGTCTGGATTCTGCATCTGGAAGCGCTGCATGCTCTCAGAGGAGCGTGCCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCGGCTGCCACAGGTGGTaGTGGATTGTGAGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCGCHRW*WIVSAS
Trigger: GGACGCACTCACAATCCACAACCACCTGTGGCAGCC...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CATGGCTGGCACGCACCTGCTCCTGGGAATGTCCGCGCTCCACAGAAGCATCAATGTCTAGAAACCTCTTaGCAAAAGGTCTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: HGWHAPAPGNVRAPQKHQCLETS*QKVCDF
Trigger: AAAGTCACAGACCTTTTGCAAAGAGGTTTCTAGACA...TTGATGCTTCTGTGGAGCGCGGACATTCCCAGGAGCAGGTGCGTGCCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAATGCAGTTGGCTCGGCTaGCCTACTTTAAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: SALHRSINTIGTKAERTQCSWLG*PTLNEA
Trigger: TGCCTCATTTAAAGTAGGCAAGCCGAGCCAACTGCA...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGTGCAGTTGGCTCGGCTaGCCTACTTTAAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKCSWLG*PTLNEA
Trigger: TGCCTCATTTAAAGTAGGCAAGCCGAGCCAACTGCA...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACACAGATCCACTGCAGGTaGGCGGCGATCTTGGCGCGC +
Preference number: 5 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTQIHCR*AAILAR
Trigger: GCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCTG...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp GAGATTACAGCTGGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGACACAACGAAAGTaGTGCAAGCTTTCCGCTGAA +
Preference number: 5 (lower is better)
Translates to: EITAGQYEGVRQCARGRGETQRK*CKLSAE
Trigger: TTCAGCGGAAAGCTTGCACAACTTTCGTTGTGTCTC...ACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCCAGCTGTAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCGAAAGCAGTCCATCTTaGGTGCACGCACACAGCCAT +
Preference number: 5 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVESSPS*VHAHSH
Trigger: ATGGCTGTGTGCGTGCACCAAAGATGGACTGCTTTC...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAACTTGGAGGGAGACTTTaGATGAGCTGGACTTTCCAA +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQELGGRL*MSWTFQ
Trigger: TTGGAAAGTCCAGCTCATCAAAAGTCTCCCTCCAAG...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409386.3
CDS CCA 90 bp TCCGAGTCAGAATCCTGCCTGAGGAGAGTCCACGGCTCTGAATCGTaGGAGTTGGGGCTTTTTGAACAACTAACATATAACCTTCCCTCG +
Preference number: 5 (lower is better)
Translates to: SESESCLRRVHGSES*ELGLFEQLTYNLPS
Trigger: CGAGGGAAGGTTATATGTTAGTTGTTCAAAAAGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS-3UTR CAA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGGTGTCCAGCTGTCCTaGGGGAGACCGGGCATTTGC +
Preference number: 5 (lower is better)
Translates to: TPKKICAKLMLVAPESSGGVQLS*GRPGIC
Trigger: GCAAATGCCCGGTCTCCCCAAGGACAGCTGGACACC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CCAGAAAGGCCCAAAAGCACCACCACGAAAATTAATCCTGTGTCTGAAACTTTTGGTGTCCAGCTGTCCTaGGGGAGACCGGGCATTTGC +
Preference number: 5 (lower is better)
Translates to: PERPKSTTTKINPVSETFGVQLS*GRPGIC
Trigger: GCAAATGCCCGGTCTCCCCAAGGACAGCTGGACACC...AAAAGTTTCAGACACAGGATTAATTTTCGTGGTGGTGCTTTTGGGCCTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGGTCTTTTGCTTTATGTaGCTGAGCAAAGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKVFCFM*LSKGQA
Trigger: AGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGAC...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAAGTCTTTTGCTTTATGTaGCTGAGCAAAGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SALHRSINTIGTKAERTQVFCFM*LSKGQA
Trigger: AGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGAC...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAGAGCCACAGGGTCTTTaGCTTTATGTTGCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: GMSALHRSINTIGTKAEREPQGL*LYVAEQ
Trigger: TTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTC...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp AGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCCTGTGGCCTGTCTTTaGGGACCTTCAGCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: SGCVEHDIYKIARDCTSLPVACL*GPSAPP
Trigger: CGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAGG...AAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACAAGGGCATCATTTACGAGTCTGGGTCACCCTTTGGACGCCAGCTGCACCGGGTCCAATATGGAATTCTaGTGGGGTTCGTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: TRASFTSLGHPLDASCTGSNMEF*WGSFTF
Trigger: AAAAGTGAACGAACCCCACAAGAATTCCATATTGGA...CCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp AGGCAAACATCAGCTCCTAGTGCCATTCCCCACCCTCATGACCGCGTGCCAGAAAAAAGGTCTGTGACTTaGCACACTTCGTACCCAAAT +
Preference number: 5 (lower is better)
Translates to: RQTSAPSAIPHPHDRVPEKRSVT*HTSYPN
Trigger: ATTTGGGTACGAAGTGTGCAAAGTCACAGACCTTTT...TTCTGGCACGCGGTCATGAGGGTGGGGAATGGCACTAGGAGCTGATGTTTGCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAGCGGAAGACAGGCTTaGCAGATTTCGGTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKSGRQA*QISVLL
Trigger: TAAAAGCACCGAAATCTGCAAAGCCTGTCTTCCGCT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 90 bp ATTTCTGCTGTTTCTGTCTCAGTGGCAATAAAGGATGGGATGGGCTaGAGGCAGCAGTTCCTTTCCCGAGGTATTCAGGTTCTTCCGGGT +
Preference number: 5 (lower is better)
Translates to: ISAVSVSVAIKDGMG*RQQFLSRGIQVLPG
Trigger: ACCCGGAAGAACCTGAATACCTCGGGAAAGGAACTGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACTGAGACAGAAACAGCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS GCA 90 bp CTGGCGTCATCTTTGTCTTCATGTTCCTTCACCTTCATGTCCTCCTaGAGTTTGGCCGACTCTTCCTCCCCAATGTATCTGCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: LASSLSSCSFTFMSS*SLADSSSPMYLLKT
Trigger: GGTTTTCAGCAGATACATTGGGGAGGAAGAGTCGGCCAAACTGCAGGAGGACATGAAGGTGAAGGAACATGAAGACAAAGATGACGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp GATCACCTTATTTCTCTCCAGCTCGTGCAGAGCCACAGGGTCTTTTaGTTTATGTTGCTGAGCAAAGGCCAGGCTCTCTTTGTCCACATC +
Preference number: 5 (lower is better)
Translates to: DHLISLQLVQSHRVF*FMLLSKGQALFVHI
Trigger: GATGTGGACAAAGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAATAAGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 90 bp CACTGGAGAGTGCTTTCTGATACTCTAGGCTCTCAAGGAAACCATTaGCAACCTGGGGAATATCTGTCACTCACCGTCTTTCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: HWRVLSDTLGSQGNH*QPGEYLSLTVFQLL
Trigger: CAGGAGCTGAAAGACGGTGAGTGACAGATATTCCCCAGGTTGGCAATGGTTTCCTTGAGAGCCTAGAGTATCAGAAAGCACTCTCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS CCA 90 bp CCCTGTATGGATTTCTGCTGTTTCTGTCTCAGTGGCAATAAAGGATaGGATGGGCTGAAGGCAGCAGTTCCTTTCCCGAGGTATTCAGGT +
Preference number: 5 (lower is better)
Translates to: PCMDFCCFCLSGNKG*DGLKAAVPFPRYSG
Trigger: ACCTGAATACCTCGGGAAAGGAACTGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACTGAGACAGAAACAGCAGAAATCCATACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TCAACACCATTGGGACCAAGGCAGAAAGAACCCAAAGCCATCCACTTACTTGGAGCTTTCTGTTCATCCTaGAAGAAGAAGCCGACCCCC +
Preference number: 5 (lower is better)
Translates to: STPLGPRQKEPKAIHLLGAFCSS*KKKPTP
Trigger: GGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAGC...TCCAAGTAAGTGGATGGCTTTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACGGTCTTCCTCAGCTTaGCGCCGGGCTTCGTCACGC +
Preference number: 5 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKRSSSA*RRASSR
Trigger: GCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACCG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCGGCTTTGACTTGGGCTaGCCGAGCCCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSGFDLG*PSPCSS
Trigger: AGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCC...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GGAATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGACTGACAGACATGGTTTaGGCTGGGATCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: GMSALHRSINTIGTKAERLTDMV*AGIKLN
Trigger: GTTTAACTTGATCCCAGCCAAAACCATGTCTGTCAG...TCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGCTGACAGACATGGTTTaGGCTGGGATCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKLTDMV*AGIKLN
Trigger: GTTTAACTTGATCCCAGCCAAAACCATGTCTGTCAG...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCCACCCCAAGCCAAGATaGAGCCTCAGTCCCATAGTC +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCHPKPR*SLSPIV
Trigger: GACTATGGGACTGAGGCTCAATCTTGGCTTGGGGTG...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp ATGTCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCACCACTGCAGGGGCTTaGAATATAGGAGACATTGAT +
Preference number: 5 (lower is better)
Translates to: MSALHRSINTIGTKAERTTTAGA*NIGDID
Trigger: ATCAATGTCTCCTATATTCAAAGCCCCTGCAGTGGT...GGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS TCA 90 bp GAACTCTGCTGTGCGAGAAACATGGAACCACTGGAGAGTGCTTTCTaGTACTCTAGGCTCTCAAGGAAACCATTGCCAACCTGGGGAATA +
Preference number: 5 (lower is better)
Translates to: ELCCARNMEPLESAF*YSRLSRKPLPTWGI
Trigger: TATTCCCCAGGTTGGCAATGGTTTCCTTGAGAGCCTAGAGTATCAGAAAGCACTCTCCAGTGGTTCCATGTTTCTCGCACAGCAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS GCA 90 bp CCCACCTCCTTCACACTCGCATCCAGAACTTCTTTGAGGCTCATCTaGTCCGAAAGAATGTTGGCATCTTTGGAAGAGGACAGAGTAAGT +
Preference number: 5 (lower is better)
Translates to: PTSFTLASRTSLRLI*SERMLASLEEDRVS
Trigger: ACTTACTCTGTCCTCTTCCAAAGATGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGCGAGTGTGAAGGAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 90 bp ACAGGCTCTTCCAAGAACTCTGCTGTGCGAGAAACATGGAACCACTaGAGAGTGCTTTCTGATACTCTAGGCTCTCAAGGAAACCATTGC +
Preference number: 5 (lower is better)
Translates to: TGSSKNSAVRETWNH*RVLSDTLGSQGNHC
Trigger: GCAATGGTTTCCTTGAGAGCCTAGAGTATCAGAAAGCACTCTCCAGTGGTTCCATGTTTCTCGCACAGCAGAGTTCTTGGAAGAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS-3UTR CAA 90 bp GGCCAATATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAGTCAGATTAACAATGTaGGATGCCAAACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GQYEGVRQCARGRGEKQEVRLTM*DAKLSL
Trigger: CAAAGACAGTTTGGCATCCAACATTGTTAATCTGAC...TTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCATATTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp TTCACATTTGTAGACGTTGTTCTAGCGGAAGACAGGCTTTGCAGATTTCGGTGCTTGGTCTCACAGCTGTaGAGTCTCTGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FTFVDVVLAEDRLCRFRCLVSQL*SLWSFL
Trigger: GAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAA...GCACCGAAATCTGCAAAGCCTGTCTTCCGCTAGAACAACGTCTACAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCACTGCTGGTGCTGGACTaGGTCTCACAGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: DSFHGENPELIQTSHGNALLVLD*VSQLLS
Trigger: ACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAG...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCGGTCTGTGCTCCTGCTaGGGTTACGGCTCAGTATGG +
Preference number: 5 (lower is better)
Translates to: TPKKICAKLMLVAPESSGGLCSC*GYGSVW
Trigger: CCATACTGAGCCGTAACCCAAGCAGGAGCACAGACC...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ATGAGGGTGTCAGGCAATGTGCAAGGGGGCGAGGTGAGAAGCAAGAAAGCAAAGAAAAGGTCTGTGACTTaGCACACTTCGTACCCAAAT +
Preference number: 5 (lower is better)
Translates to: MRVSGNVQGGEVRSKKAKKRSVT*HTSYPN
Trigger: ATTTGGGTACGAAGTGTGCAAAGTCACAGACCTTTT...CTTTGCTTTCTTGCTTCTCACCTCGCCCCCTTGCACATTGCCTGACACCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACCTAGGAAACTGCGTTaGGTCGCGTTGGAGATCGGT +
Preference number: 5 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQPRKLR*VALEIG
Trigger: ACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTCCCAAGAAAATATGTGCAAAACTAATGTTAGTGGCTCCAGAATCTTCCGGCCCCCGTTCATCCTCCTaGGTGATCACCTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TPKKICAKLMLVAPESSGPRSSS*VITCFS
Trigger: AGAGAAGCAGGTGATCACCAAGGAGGATGAACGGGG...GCCGGAAGATTCTGGAGCCACTAACATTAGTTTTGCACATATTTTCTTGGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCATGTCCTCCTGCAGTTaGGCCGACTCTTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSMSSCS*ADSSSP
Trigger: TGGGGAGGAAGAGTCGGCCAAACTGCAGGAGGACAT...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGATTGGTCTCACAGCTGTaGAGTCTCTGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRLVSQL*SLWSFL
Trigger: GAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAA...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GAAATCATACAGCCTTTAGTTCCCTATTTACAGGACAGAGAGCGGCTGTGTCGAAGAAAGTCTTCGGTTTaGGAAACAGCGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: EIIQPLVPYLQDRERLCRRKSSV*ETASPQ
Trigger: CTGTGGGGACGCTGTTTCCAAAACCGAAGACTTTCT...TCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTGTATGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTTCTCTTCAAAGGACTGAGGAAAGGGGAATAAGACCTATAATTCCTTCTAGCGGCTCCTTAAAGAGCTaGGGACCTGTGTACTCGGCC +
Preference number: 5 (lower is better)
Translates to: TSLQRTEERGIRPIIPSSGSLKS*GPVYSA
Trigger: GGCCGAGTACACAGGTCCCAAGCTCTTTAAGGAGCC...GCTAGAAGGAATTATAGGTCTTATTCCCCTTTCCTCAGTCCTTTGAAGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TCCGCGCTCCACAGAAGCATCAACACCATTGGGACCAAGGCAGAAAGAACCCAATCCAATATGGAATTCTaGTGGGGTTCGTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: SALHRSINTIGTKAERTQSNMEF*WGSFTF
Trigger: AAAAGTGAACGAACCCCACAAGAATTCCATATTGGA...TTGGGTTCTTTCTGCCTTGGTCCCAATGGTGTTGATGCTTCTGTGGAGCGCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp ACTAATGTTAGTGGCTCCAGAATCTTCCGGCAGCTGGTCAGTTGCAGCAGTGTCAAAAGGTCTGTGACTTaGCACACTTCGTACCCAAAT +
Preference number: 5 (lower is better)
Translates to: TNVSGSRIFRQLVSCSSVKRSVT*HTSYPN
Trigger: ATTTGGGTACGAAGTGTGCAAAGTCACAGACCTTTT...GACACTGCTGCAACTGACCAGCTGCCGGAAGATTCTGGAGCCACTAACATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CCCCAAGCCAAGATTGAGCCTCAGTCCCATAGTCACGAGATTACAGCTGGCCAATGTCTAGAAACCTCTTaGCAAAAGGTCTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: PQAKIEPQSHSHEITAGQCLETS*QKVCDF
Trigger: AAAGTCACAGACCTTTTGCAAAGAGGTTTCTAGACA...TTGGCCAGCTGTAATCTCGTGACTATGGGACTGAGGCTCAATCTTGGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS-3UTR CAA 90 bp CAACGAACAGTGAAAACTACACGCTTAAGGACAAGTTTCAGGATGTTCCACACAACTGGTGCCTTCACTTaGTGGTCCTGCGAGTTATTC +
Preference number: 5 (lower is better)
Translates to: QRTVKTTRLRTSFRMFHTTGAFT*WSCELF
Trigger: GAATAACTCGCAGGACCACAAAGTGAAGGCACCAGT...TGTGTGGAACATCCTGAAACTTGTCCTTAAGCGTGTAGTTTTCACTGTTCGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp AATTCTGAGACACAACGAAAGTTGTGCAAGCTTTCCGCTGAAAGAAATTTGCAATCTCTACACTGGGCGTaGGGGTTTTACTTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: NSETQRKLCKLSAERNLQSLHWA*GFYFGR
Trigger: CCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGA...TTGCAAATTTCTTTCAGCGGAAAGCTTGCACAACTTTCGTTGTGTCTCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGCGGAAGACAGGCTTaGCAGATTTCGGTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: PIYRTESGCVEHDIYKIASGRQA*QISVLL
Trigger: TAAAAGCACCGAAATCTGCAAAGCCTGTCTTCCGCT...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCAAGCGGAAGACAGGCTTaGCAGATTTCGGTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: DSFHGENPELIQTSHGNASGRQA*QISVLL
Trigger: TAAAAGCACCGAAATCTGCAAAGCCTGTCTTCCGCT...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp CAAAACTTAATGAATGATGGCTGCAGTTGGCTCGGCTTGCCTACTTTAAATGAGTGCAGTTGGCTCGGCTaGCCTACTTTAAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: QNLMNDGCSWLGLPTLNECSWLG*PTLNEA
Trigger: TGCCTCATTTAAAGTAGGCAAGCCGAGCCAACTGCA...CTCATTTAAAGTAGGCAAGCCGAGCCAACTGCAGCCATCATTCATTAAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp TGTCCAAGCATGAAGAACGCAGGGACGCTTCTGTCAATCATTAGGCGAACACTGTGTGTAACTCAGCACTaGAGAAATCATACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: CPSMKNAGTLLSIIRRTLCVTQH*RNHTAF
Trigger: AAAGGCTGTATGATTTCTCAAGTGCTGAGTTACACA...CAGTGTTCGCCTAATGATTGACAGAAGCGTCCCTGCGTTCTTCATGCTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAGGAGAAAATCCAGAATaGATTCAGACGTCCCATGGG +
Preference number: 5 (lower is better)
Translates to: PIYRTESGCVEHDIYKIAGENPE*IQTSHG
Trigger: CCCATGGGACGTCTGAATCAATTCTGGATTTTCTCC...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp TTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAAGAGATCTGAATCGTGGGAGTaGGGGCTTTTTGAACAACTA +
Preference number: 5 (lower is better)
Translates to: LQDRERLCRTRYIQNRKRSESWE*GLFEQL
Trigger: TAGTTGTTCAAAAAGCCCCAACTCCCACGATTCAGA...TCTCTTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAACATCAGAAGCTGCTCTaGCTGCTGAGAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQHQKLL*LLRDFQ
Trigger: CTGAAAATCTCTCAGCAGCAAGAGCAGCTTCTGATG...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCATTGTCGATCATTTTCTaGGTGATGTTCTTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: PIYRTESGCVEHDIYKIALSIIF*VMFFGP
Trigger: GGGGCCAAAGAACATCACCAAGAAAATGATCGACAA...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATCGATAGCGGACCTTTaGATGAGCTGGACTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQSIADL*MSWTFQ
Trigger: TTGGAAAGTCCAGCTCATCAAAAGGTCCGCTATCGA...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp GACTCATTCCATGGAGAAAATCCAGAATTGATTCAGACGTCCCATGGGAATGCAAGTGAAGAATACAGTTaGGGCCTGAAGTCTGCTAAG +
Preference number: 5 (lower is better)
Translates to: DSFHGENPELIQTSHGNASEEYS*GLKSAK
Trigger: CTTAGCAGACTTCAGGCCCAAACTGTATTCTTCACT...TGCATTCCCATGGGACGTCTGAATCAATTCTGGATTTTCTCCATGGAATGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS-3UTR CAA 90 bp CCTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCATGTGTAACTCAGCACTaGAGAAATCATACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PIYRTESGCVEHDIYKIACVTQH*RNHTAF
Trigger: AAAGGCTGTATGATTTCTCAAGTGCTGAGTTACACA...TGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp CTATTTACAGGACAGAGAGCGGCTGTGTCGAACACGATATATACAAAATCGCAATCCAATATGGAATTCTaGTGGGGTTCGTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: LFTGQRAAVSNTIYTKSQSNMEF*WGSFTF
Trigger: AAAAGTGAACGAACCCCACAAGAATTCCATATTGGA...TTGCGATTTTGTATATATCGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS-3UTR CAA 90 bp GCTGTGTCGAACACGATATATACAAAATCGCAAGAGACTGTACTTCTCTTCAAACTGACAGACATGGTTTaGGCTGGGATCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: AVSNTIYTKSQETVLLFKLTDMV*AGIKLN
Trigger: GTTTAACTTGATCCCAGCCAAAACCATGTCTGTCAG...TTTGAAGAGAAGTACAGTCTCTTGCGATTTTGTATATATCGTGTTCGACACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312405.10
ENST00000389532.9
CDS GCA 72 bp CCCTCGGCGGCGGCGCGGCCGCTCGCGTCCACCATCTaGAGACAAAGGGCTGAGGCGGCGGCCCGGCCGCAA +
Preference number: 6 (lower is better)
Translates to: PSAAARPLASTI*RQRAEAAARPQ
Trigger: TTGCGGCCGGGCCGCCGCCTCAGCCCTTTGTCTGCAGATGGTGGACGCGAGCGGCCGCGCCGCCGCCGAGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS GCA 72 bp CTGCATGCTGCGGGCGCTGAGCCCGAGCGGAGGAGGTaGCGAGCCCGCGGCCCAAAGAGGCGGCGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LHAAGAEPERRR*RARGPKRRRQE
Trigger: CTCCTGCCGCCGCCTCTTTGGGCCGCGGGCTCGGCACCTCCTCCGCTCGGGCTCAGCGCCCGCAGCATGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389532.9
CDS TCA 72 bp GCGGCCGCTCGCGTCCACCATCTGCAGACAAAGGGCTaGGGCGGCGGCCCGGCCGCAACAAAGGCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: AAARVHHLQTKG*GGGPAATKAPP
Trigger: CGGCGGCGCCTTTGTTGCGGCCGGGCCGCCGCCTCAGCCCTTTGTCTGCAGATGGTGGACGCGAGCGGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS GCA 72 bp TGCTGCTTGCGCACGCGGGCCTCCTCGGCCTTGCGCTaGTGCTTCAGGAGGAAGGCCGCCCGCTTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: CCLRTRASSALR*CFRRKAARFLA
Trigger: CGCCAAGAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp CCTTGGCGCAGATCCACTGCAGGTTGGCGGCGATCTTaGCGCGCGCCGCGTCGTAGCGGTCCAGGGGCACGA +
Preference number: 6 (lower is better)
Translates to: PWRRSTAGWRRS*RAPRRSGPGAR
Trigger: TCGTGCCCCTGGACCGCTACGACGCGGCGCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCTGCGCCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS CCA 72 bp CTCGGCCGTAGGCCTTGGCGCAGATCCACTGCAGGTTaGCGGCGATCTTGGCGCGCGCCGCGTCGTAGCGGT +
Preference number: 6 (lower is better)
Translates to: LGRRPWRRSTAG*RRSWRAPRRSG
Trigger: ACCGCTACGACGCGGCGCGCGCCAAGATCGCCGCCAACCTGCAGTGGATCTGCGCCAAGGCCTACGGCCGAG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS CAA 72 bp TCCAGCTGCTGCTTGCGCACGCGGGCCTCCTCGGCCTaGCGCTGCTGCTTCAGGAGGAAGGCCGCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: SSCCLRTRASSA*RCCFRRKAARF
Trigger: GAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp ACCTCCGCTTCCAGCTGCTGCTTGCGCACGCGGGCCTCCTCGGCCTaGCGCTGCTGCTTCAGGAGGAAGGCCGCCCGCTTCTTGGCGAGC +
Preference number: 6 (lower is better)
Translates to: TSASSCCLRTRASSA*RCCFRRKAARFLAS
Trigger: GCTCGCCAAGAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp CGGGCTTCGTCACGCTTGAGCTCCACCTCCGCTTCCAGCTGCTGCTaGCGCACGCGGGCCTCCTCGGCCTTGCGCTGCTGCTTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RASSRLSSTSASSCC*RTRASSALRCCFRR
Trigger: CCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp TCGTCACGCTTGAGCTCCACCTCCGCTTCCAGCTGCTaGTTGCGCACGCGGGCCTCCTCGGCCTTGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSRLSSTSASSC*LRTRASSALRC
Trigger: GCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp GCTTCGTCACGCTTGAGCTCCACCTCCGCTTCCAGCTaGTGCTTGCGCACGCGGGCCTCCTCGGCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: ASSRLSSTSASS*CLRTRASSALR
Trigger: GCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TCACGCTTGAGCTCCACCTCCGCTTCCAGCTGCTGCTaGCGCACGCGGGCCTCCTCGGCCTTGCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SRLSSTSASSCC*RTRASSALRCC
Trigger: GCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp TATCAGGGGTGGAGGAGCACTTGGTGCCGGAGTCGCTaGACGACTCTTCCCGGTGCACCGACTTCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: YQGWRSTWCRSR*TTLPGAPTSAA
Trigger: CGCGGCCGAAGTCGGTGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCCTGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS CAA 72 bp CCCGGTGCACCGACTTCGGCCGCGGCTTCTTCGGCTTaGACTTGGGCTTGCCGAGCCCCTGCTCCTCTAGGA +
Preference number: 6 (lower is better)
Translates to: PGAPTSAAASSA*TWACRAPAPLG
Trigger: TCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 72 bp AGGCTGGCGGGATCCTTGCCATGCTGGCTCGGACTCTaGTCCCTCTTCTGCCTCCACGTCGTCAGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: RLAGSLPCWLGL*SLFCLHVVRGA
Trigger: AGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp CACTTGGTGCCGGAGTCGCTGCACGACTCTTCCCGGTaGACCGACTTCGGCCGCGGCTTCTTCGGCTTTGAC +
Preference number: 6 (lower is better)
Translates to: HLVPESLHDSSR*TDFGRGFFGFD
Trigger: GTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCAAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 72 bp CCGCCGACGCGGTCTCCCAGTCTCGGTCTGTGCTCCTaGTTGGGTTACGGCTCAGTATGGGCAGGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: PPTRSPSLGLCS*LGYGSVWAGLP
Trigger: TGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 72 bp GGGTCCCTGCAGCAGGGCTGCCTAGGAAACTGCGTTTaGTCGCGTTGGAGATCGGTACAGGAGGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSLQQGCLGNCV*SRWRSVQEAGC
Trigger: GCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCCCTGCTGCAGGGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS CCA 72 bp CGCAAAGACCGAAGGGAGGACGCCAAGTGTCCACGCTaGCCCCATGTGAGGGACGGCTCAGCCTCGAGCCAT +
Preference number: 6 (lower is better)
Translates to: RKDRREDAKCPR*PHVRDGSASSH
Trigger: ATGGCTCGAGGCTGAGCCGTCCCTCACATGGGGCCAGCGTGGACACTTGGCGTCCTCCCTTCGGTCTTTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS CAA 72 bp CGGTCTTCCTCAGCTTTGCGCCGGGCTTCGTCACGCTaGAGCTCCACCTCCGCTTCCAGCTGCTGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: RSSSALRRASSR*SSTSASSCCLR
Trigger: GCGCAAGCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
ENST00000493088.1
CDS TCA 72 bp AGAAGAAGCCGACCCCCGGCTTCTGGTCGCCTTCGCTaGCAAGGTCCGCCGAGCCATCGAGGCTTACCAGCT +
Preference number: 6 (lower is better)
Translates to: RRSRPPASGRLR*QGPPSHRGLPA
Trigger: AGCTGGTAAGCCTCGATGGCTCGGCGGACCTTGTCAGCGAAGGCGACCAGAAGCCGGGGGTCGGCTTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp GAAGGGAGGACGCCAAGTGTCCACGCTGGCCCCATGTaGGGGACGGCTCAGCCTCGAGCCATTCTCCTCACT +
Preference number: 6 (lower is better)
Translates to: EGRTPSVHAGPM*GTAQPRAILLT
Trigger: AGTGAGGAGAATGGCTCGAGGCTGAGCCGTCCCTCACATGGGGCCAGCGTGGACACTTGGCGTCCTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS GCA 72 bp TCCTTGCCATGCTGGCTCGGACTCTGCTCCCTCTTCTaGCTCCACGTCGTCAGAGGGGCTGGGCAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: SLPCWLGLCSLF*LHVVRGAGQLS
Trigger: TGAGAGCTGCCCAGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp TCCGGCTCAAGTTATCAGGGGTGGAGGAGCACTTGGTaGCGGAGTCGCTGCACGACTCTTCCCGGTGCACCG +
Preference number: 6 (lower is better)
Translates to: SGSSYQGWRSTW*RSRCTTLPGAP
Trigger: CGGTGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGAGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 72 bp AAGATGCCGCCGACGCGGTCTCCCAGTCTCGGTCTGTaGTCCTGCTTGGGTTACGGCTCAGTATGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: KMPPTRSPSLGL*SCLGYGSVWAG
Trigger: CCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGGCGGCATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 72 bp CTGCTCCCTCTTCTGCCTCCACGTCGTCAGAGGGGCTaGGCAGCTCTCAGACGCATCTGGCGTGGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: LLPLLPPRRQRG*AALRRIWRGLL
Trigger: CAGAAGACCACGCCAGATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GGCTTTGCGGTGGCCAGCCACGCCCGTGGGAGAGAGTaGCTCCACGAAGTGGACTGGTGCCTTCACTTTGTG +
Preference number: 6 (lower is better)
Translates to: GFAVASHARGRE*LHEVDWCLHFV
Trigger: CACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGCCACCGCAAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GCACCGACTTCGGCCGCGGCTTCTTCGGCTTTGACTTaGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: APTSAAASSALT*ACRAPAPLGSA
Trigger: AGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS CAA 72 bp AGGGTCCCTGCAGCAGGGCTGCCTAGGAAACTGCGTTaGGTCGCGTTGGAGATCGGTACAGGAGGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: RVPAAGLPRKLR*VALEIGTGGRL
Trigger: CAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCCCTGCTGCAGGGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS CAA 72 bp GGGTTTTACTTCGGGAGGAGCCCTGTGGCCTGTCTTTaGGGACCTTCAGCTCCGCCGGCCTTCCGGAACGGG +
Preference number: 6 (lower is better)
Translates to: GFYFGRSPVACL*GPSAPPAFRNG
Trigger: CCCGTTCCGGAAGGCCGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAGGGCTCCTCCCGAAGTAAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TGCACCGACTTCGGCCGCGGCTTCTTCGGCTTTGACTaGGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGC +
Preference number: 6 (lower is better)
Translates to: CTDFGRGFFGFD*GLPSPCSSRIC
Trigger: GCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS CAA 72 bp CCGACGCGGTCTCCCAGTCTCGGTCTGTGCTCCTGCTaGGGTTACGGCTCAGTATGGGCAGGGCTTCCATCG +
Preference number: 6 (lower is better)
Translates to: PTRSPSLGLCSC*GYGSVWAGLPS
Trigger: CGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CAA 90 bp TGGGCGTTGGGGTTTTACTTCGGGAGGAGCCCTGTGGCCTGTCTTTaGGGACCTTCAGCTCCGCCGGCCTTCCGGAACGGGAATTCCGGC +
Preference number: 6 (lower is better)
Translates to: WALGFYFGRSPVACL*GPSAPPAFRNGNSG
Trigger: GCCGGAATTCCCGTTCCGGAAGGCCGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAGGGCTCCTCCCGAAGTAAAACCCCAACGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TCTTCCCGGTGCACCGACTTCGGCCGCGGCTTCTTCGGCTTTGACTaGGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGCTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSRCTDFGRGFFGFD*GLPSPCSSRICCCF
Trigger: GAAGCAGCAGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS CAA 90 bp ACGACTCTTCCCGGTGCACCGACTTCGGCCGCGGCTTCTTCGGCTTaGACTTGGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: TTLPGAPTSAAASSA*TWACRAPAPLGSAA
Trigger: AGCAGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCGGGAAGAGTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS CAA 90 bp ATGTGCAGCTGTACCAGCTCAGATGCCAGGAGGCTGGCGGGATCCTaGCCATGCTGGCTCGGACTCTGCTCCCTCTTCTGCCTCCACGTC +
Preference number: 6 (lower is better)
Translates to: MCSCTSSDARRLAGS*PCWLGLCSLFCLHV
Trigger: GACGTGGAGGCAGAAGAGGGAGCAGAGTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAGCTGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp CAGAGGCCCACCACAGACCTCTCCTGCGGTTTCCACTaGCAGTGGTCCTGTCTCGGTGGGGTCGATGCCCAT +
Preference number: 6 (lower is better)
Translates to: QRPTTDLSCGFH*QWSCLGGVDAH
Trigger: ATGGGCATCGACCCCACCGAGACAGGACCACTGTCAGTGGAAACCGCAGGAGAGGTCTGTGGTGGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp CTCCTTAAAGAGCTTGGGACCTGTGTACTCGGCCACTaGGGCCAGGGAAGATGCCGCCGACGCGGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: LLKELGTCVLGH*GQGRCRRRGLP
Trigger: TGGGAGACCGCGTCGGCGGCATCTTCCCTGGCCTCAGTGGCCGAGTACACAGGTCCCAAGCTCTTTAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS GCA 72 bp AGCCTCGGCCTTGCCCTTCTTCACCACATGCAGGAATaGAGCCTTGCCGAGCTTCAGGCGCTGCCTTGCCGA +
Preference number: 6 (lower is better)
Translates to: SLGLALLHHMQE*SLAELQALPCR
Trigger: TCGGCAAGGCAGCGCCTGAAGCTCGGCAAGGCTGCATTCCTGCATGTGGTGAAGAAGGGCAAGGCCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp TCTAGGATCTGCTGCTGCTTCCTCCGCAGGTACTCCTaGTTGATGAGCTCGCGCCGCGCCTTCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SRICCCFLRRYS*LMSSRRAFSSS
Trigger: GGAGGAGGAGAAGGCGCGGCGCGAGCTCATCAAGCAGGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 72 bp GCAGGGCTTCCATCGATTCCACTCGCTGAGAGGGTGTaGCCCCGGAATGAACGCTCTCGGGTTCTGTCGTCG +
Preference number: 6 (lower is better)
Translates to: AGLPSIPLAERV*PRNERSRVLSS
Trigger: CGACGACAGAACCCGAGAGCGTTCATTCCGGGGGCACACCCTCTCAGCGAGTGGAATCGATGGAAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS GCA 72 bp GGGCTCCTTAAAGAGCTTGGGACCGCTGAGAGGGTGTaGCCCCGGAATGAACGCTCTCGGGTTCTGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GLLKELGTAERV*PRNERSRVLSS
Trigger: CGACGACAGAACCCGAGAGCGTTCATTCCGGGGGCACACCCTCTCAGCGGTCCCAAGCTCTTTAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487868.1
CDS CCA 72 bp GGCCCTGCCTACATGAAGGAAGAAGCCATCCGTGGATaGTCCCTGGGGGAACGGATCGAATCCGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: GPAYMKEEAIRG*SLGERIESAKG
Trigger: GCCCTTGGCGGATTCGATCCGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCCTTCATGTAGGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GGGTCTCAAGTGCGGGAGCGTCTCTACACTGGGCGTTaGGGTTTTACTTCGGGAGGAGCCCTGTGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GSQVRERLYTGR*GFTSGGALWPV
Trigger: GACAGGCCACAGGGCTCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCCCGCACTTGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GAGTCCGGCTCAAGTTATCAGGGGTGGAGGAGCACTTaGTGCCGGAGTCGCTGCACGACTCTTCCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: ESGSSYQGWRST*CRSRCTTLPGA
Trigger: TGCACCGGGAAGAGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGAGCCGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS CCA 72 bp CGACGCGGTCTCCCAGTCTCGGTCTGTGCTCCTGCTTaGGTTACGGCTCAGTATGGGCAGGGCTTCCATCGA +
Preference number: 6 (lower is better)
Translates to: RRGLPVSVCAPA*VTAQYGQGFHR
Trigger: TCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 72 bp GCTGCACCGGGGTCATTTACGAGTCTGGGCCTTCTTTaGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTT +
Preference number: 6 (lower is better)
Translates to: AAPGSFTSLGLL*HCRPLGLPQVV
Trigger: AACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACCCCGGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp GCAGCAGGGCTGCCTAGGAAACTGCGTTTGGTCGCGTaGGAGATCGGTACAGGAGGCCGGCTGCTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: AAGLPRKLRLVA*EIGTGGRLLFW
Trigger: CCAGAAGAGCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS CAA 72 bp GCAGGAATGCAGCCTTGCCGAGCTTCAGGCGCTGCCTaGCCGACAGCGCCTCCATCTTCTTCTTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: AGMQPCRASGAA*PTAPPSSSSGP
Trigger: AGGCCCAGAAGAAGAAGATGGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGCTCGGCAAGGCTGCATTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp AGCTGCACCGGGGTCATTTACGAGTCTGGGCCTTCTTaGGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGT +
Preference number: 6 (lower is better)
Translates to: SCTGVIYESGPS*ALQAAWAATGG
Trigger: ACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACCCCGGTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp AAGATGCCGCCGACGCGGTCTCCCAGTCTCGGTCTGTGCTCCTGCTaGGGTTACGGCTCAGTATGGGCAGGGCTTCCATCGATTCCACTC +
Preference number: 6 (lower is better)
Translates to: KMPPTRSPSLGLCSC*GYGSVWAGLPSIPL
Trigger: GAGTGGAATCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGACTGGGAGACCGCGTCGGCGGCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CAA 90 bp TTGGACGCCAGCTGCACCGGGGTCATTTACGAGTCTGGGCCTTCTTaGGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTTGTGGATTG +
Preference number: 6 (lower is better)
Translates to: LDASCTGVIYESGPS*ALQAAWAATGGCGL
Trigger: CAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACCCCGGTGCAGCTGGCGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp TTGGGCTTGCCGAGCCCCTGCTCCTCTAGGATCTGCTaGTGCTTCCTCCGCAGGTACTCCTGCTTGATGAGC +
Preference number: 6 (lower is better)
Translates to: LGLPSPCSSRIC*CFLRRYSCLMS
Trigger: GCTCATCAAGCAGGAGTACCTGCGGAGGAAGCAGCAGCAGATCCTAGAGGAGCAGGGGCTCGGCAAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000493088.1
CDS GCA 72 bp CCGGGGTCATTTACGAGTCTGGGCCTTCTTTGGCACTaGAGGCCGCTTGGGCTGCCACAGGTGGTTGTGGAT +
Preference number: 6 (lower is better)
Translates to: PGSFTSLGLLWH*RPLGLPQVVVD
Trigger: ATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGACCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp GAAGGCAGCAGTTCCTTTCCCGCACAGGCTGCTGGGTaGAGACAACAGGGTGCAGACAGCAGGTCACAGAGC +
Preference number: 6 (lower is better)
Translates to: EGSSSFPAQAAG*RQQGADSRSQS
Trigger: GCTCTGTGACCTGCTGTCTGCACCCTGTTGTCTGCACCCAGCAGCCTGTGCGGGAAAGGAACTGCTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS CCA 72 bp CAGCAGGGCTGCCTAGGAAACTGCGTTTGGTCGCGTTaGAGATCGGTACAGGAGGCCGGCTGCTCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: QQGCLGNCVWSR*RSVQEAGCSSG
Trigger: ACCAGAAGAGCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS CCA 72 bp TCGCGACTGCCAGTCATTTTCCTTCGTACCAAAGGCTaGGGGCCCTCGCTGGGCCTCCTAGACACGATGCTC +
Preference number: 6 (lower is better)
Translates to: SRLPVIFLRTKG*GPSLGLLDTML
Trigger: GAGCATCGTGTCTAGGAGGCCCAGCGAGGGCCCCCAGCCTTTGGTACGAAGGAAAATGACTGGCAGTCGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp CAGGGAAGGGTCTCAAGTGCGGGAGCGTCTCTACACTaGGCGTTGGGGTTTTACTTCGGGAGGAGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: QGRVSSAGASLH*ALGFYFGRSPV
Trigger: CACAGGGCTCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp TGTTCATCCTTGAAGAAGAAGCCGACCCCCGGCTTCTaGTCGCCTTCGCTGACAAGGTCCGCCGAGCCATCG +
Preference number: 6 (lower is better)
Translates to: CSSLKKKPTPGF*SPSLTRSAEPS
Trigger: CGATGGCTCGGCGGACCTTGTCAGCGAAGGCGACCAGAAGCCGGGGGTCGGCTTCTTCTTCAAGGATGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp AGGGTCTCAAGTGCGGGAGCGTCTCTACACTGGGCGTaGGGGTTTTACTTCGGGAGGAGCCCTGTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: RVSSAGASLHWA*GFYFGRSPVAC
Trigger: ACAGGCCACAGGGCTCCTCCCGAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCCCGCACTTGAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp AGGGTCCCTGCAGCAGGGCTGCCTAGGAAACTGCGTTTGGTCGCGTaGGAGATCGGTACAGGAGGCCGGCTGCTCTTCTGGTGTAACACT +
Preference number: 6 (lower is better)
Translates to: RVPAAGLPRKLRLVA*EIGTGGRLLFWCNT
Trigger: AGTGTTACACCAGAAGAGCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTTTCCTAGGCAGCCCTGCTGCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS TCA 72 bp AACCTTCCCTCGGTGTCTTCATCGGCCCTGCCTACATaGAGGAAGAAGCCATCCGTGGATGGTCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: NLPSVSSSALPT*RKKPSVDGPWG
Trigger: CCCCCAGGGACCATCCACGGATGGCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACACCGAGGGAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp ACATGCAGGAATGCAGCCTTGCCGAGCTTCAGGCGCTaGCTTGCCGACAGCGCCTCCATCTTCTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: TCRNAALPSFRR*LADSASIFFFW
Trigger: CCAGAAGAAGAAGATGGAGGCGCTGTCGGCAAGGCAGCGCCTGAAGCTCGGCAAGGCTGCATTCCTGCATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp CATCGGCCCTGCCTACATGAAGGAAGAAGCCATCCGTaGATGGTCCCTGGGGGAACGGATCGAATCCGCCAA +
Preference number: 6 (lower is better)
Translates to: HRPCLHEGRSHP*MVPGGTDRIRQ
Trigger: TTGGCGGATTCGATCCGTTCCCCCAGGGACCATCCACGGATGGCTTCTTCCTTCATGTAGGCAGGGCCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GAGAGGCTGTGCTCAGGCAGGGGCTCGAGCGGCCGCTaGCGTCATCTTTGTCTTCATGTTCCTTCACCTTCA +
Preference number: 6 (lower is better)
Translates to: ERLCSGRGSSGR*RHLCLHVPSPS
Trigger: TGAAGGTGAAGGAACATGAAGACAAAGATGACGCCAGCGGCCGCTCGAGCCCCTGCCTGAGCACAGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp ATGGAGCCTGTAACTGTCGAAGAGACACTTCCCATGTaGGTCACCACTGGGCTCCAGGGCACTGTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: MEPVTVEETLPM*VTTGLQGTVQA
Trigger: GGCCTGGACAGTGCCCTGGAGCCCAGTGGTGACCCACATGGGAAGTGTCTCTTCGACAGTTACAGGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp CTCGGTCTGTGCTCCTGCTTGGGTTACGGCTCAGTATaGGCAGGGCTTCCATCGATTCCACTCGCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: LGLCSCLGYGSV*AGLPSIPLAER
Trigger: CCTCTCAGCGAGTGGAATCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
CDS CCA 72 bp GGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTTGTaGATTGTGAGTGCGTCCACACTGACAGACATGGTT +
Preference number: 6 (lower is better)
Translates to: GTAGRLGCHRWL*IVSASTLTDMV
Trigger: AACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp TCTGGATGCCAGCCACAAGGGCATCATTTACGAGTCTaGGTCACCCTTTGGACGCCAGCTGCACCGGGGTCA +
Preference number: 6 (lower is better)
Translates to: SGCQPQGHHLRV*VTLWTPAAPGS
Trigger: TGACCCCGGTGCAGCTGGCGTCCAAAGGGTGACCCAGACTCGTAAATGATGCCCTTGTGGCTGGCATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TCAGACGCATCTGGCGTGGTCTTCTGGGAGCTGCTGGTGCTGGACTaGGTCTCACAGCTGTTGAGTCTCTGGAGCTTCCTCTCCGCAAAG +
Preference number: 6 (lower is better)
Translates to: SDASGVVFWELLVLD*VSQLLSLWSFLSAK
Trigger: CTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCACGCCAGATGCGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp CCCGTGGGAGAGAGTGGCTCCACGAAGTGGACTGGTGCCTTCACTTaGTGGTCCTGCGAGTTATTCTTAGAGCCTGGCACTGGGACTGTG +
Preference number: 6 (lower is better)
Translates to: PVGESGSTKWTGAFT*WSCELFLEPGTGTV
Trigger: CACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TCCTCGGCCTTGCGCTGCTGCTTCAGGAGGAAGGCCGCCCGCTTCTaGGCGAGCTCATCTTCCGCTTTCTGTTCATCCTTGAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: SSALRCCFRRKAARF*ASSSSAFCSSLKKK
Trigger: CTTCTTCTTCAAGGATGAACAGAAAGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TGGGCCTTCTTTGGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTaGTGGATTGTGAGTGCGTCCACACTGACAGACATGGTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: WAFFGTAGRLGCHRW*WIVSASTLTDMVLA
Trigger: AGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp TCGCCAGAGCTGGGATCCACTTCACAACTCGCAGCGTaGTGTAGAGCAAAAGGTGTTGGCTGGGACGCAGGC +
Preference number: 6 (lower is better)
Translates to: SPELGSTSQLAA*CRAKGVGWDAG
Trigger: GCCTGCGTCCCAGCCAACACCTTTTGCTCTACATCACGCTGCGAGTTGTGAAGTGGATCCCAGCTCTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp GGGAGCTGCTGGTGCTGGACTTGGTCTCACAGCTGTTaGGTCTCTGGAGCTTCCTCTCCGCAAAGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: GSCWCWTWSHSC*VSGASSPQSWS
Trigger: TGACCAGCTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp CCTTTCCCCAAACTCTCACGCCCGTCCCTGGGATTCTaGCTCCACAGGCTCTTCCAAGAACTCTGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: PFPKLSRPSLGF*LHRLFQELCCA
Trigger: CGCACAGCAGAGTTCTTGGAAGAGCCTGTGGAGTCAGAATCCCAGGGACGGGCGTGAGAGTTTGGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS GCA 72 bp GGGGAACTCCGGGTCAGCCTGCTGGGGAACCACGTCTaGTCTAACAATAGCCACAAGCTCCTCTTCCTCATC +
Preference number: 6 (lower is better)
Translates to: GELRVSLLGNHV*SNNSHKLLFLI
Trigger: GATGAGGAAGAGGAGCTTGTGGCTATTGTTAGAGCAGACGTGGTTCCCCAGCAGGCTGACCCGGAGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp CTCCTGCGGTTTCCACTGACAGTGGTCCTGTCTCGGTaGGGTCGATGCCCATGGGGAATTCTGAGCATGGAA +
Preference number: 6 (lower is better)
Translates to: LLRFPLTVVLSR*GRCPWGILSME
Trigger: TTCCATGCTCAGAATTCCCCATGGGCATCGACCCCACCGAGACAGGACCACTGTCAGTGGAAACCGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp TTCTTTGGCACTGCAGGCCGCTTGGGCTGCCACAGGTaGTTGTGGATTGTGAGTGCGTCCACACTGACAGAC +
Preference number: 6 (lower is better)
Translates to: FFGTAGRLGCHR*LWIVSASTLTD
Trigger: GTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TGGGAGCTGCTGGTGCTGGACTTGGTCTCACAGCTGTaGAGTCTCTGGAGCTTCCTCTCCGCAAAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: WELLVLDLVSQL*SLWSFLSAKLV
Trigger: GACCAGCTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TCTGGCGTGGTCTTCTGGGAGCTGCTGGTGCTGGACTaGGTCTCACAGCTGTTGAGTCTCTGGAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SGVVFWELLVLD*VSQLLSLWSFL
Trigger: GAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCACGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TTGCGCTGCTGCTTCAGGAGGAAGGCCGCCCGCTTCTaGGCGAGCTCATCTTCCGCTTTCTGTTCATCCTTG +
Preference number: 6 (lower is better)
Translates to: LRCCFRRKAARF*ASSSSAFCSSL
Trigger: CAAGGATGAACAGAAAGCGGAAGATGAGCTCGCCAAGAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TTTGGCACTGCAGGCCGCTTGGGCTGCCACAGGTGGTaGTGGATTGTGAGTGCGTCCACACTGACAGACATG +
Preference number: 6 (lower is better)
Translates to: FGTAGRLGCHRW*WIVSASTLTDM
Trigger: CATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp GTGGTCTTCTGGGAGCTGCTGGTGCTGGACTTGGTCTCACAGCTGTaGAGTCTCTGGAGCTTCCTCTCCGCAAAGCTGGTCATCTTCACG +
Preference number: 6 (lower is better)
Translates to: VVFWELLVLDLVSQL*SLWSFLSAKLVIFT
Trigger: CGTGAAGATGACCAGCTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp CCTCTATGTCCACCACATCCGAGTCAGAATCCTGCCTaGGGAGAGTCCACGGCTCTGAATCGTGGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: PLCPPHPSQNPA*GESTALNRGSW
Trigger: CCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGATGTGGTGGACATAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp GCTTCCTCTATGTCCACCACATCCGAGTCAGAATCCTaGCTGAGGAGAGTCCACGGCTCTGAATCGTGGGAG +
Preference number: 6 (lower is better)
Translates to: ASSMSTTSESES*LRRVHGSESWE
Trigger: CTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGATGTGGTGGACATAGAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp CCGCTTGGGCTGCCACAGGTGGTTGTGGATTGTGAGTaGGTCCACACTGACAGACATGGTTTTGGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: PLGLPQVVVDCE*VHTDRHGFGWD
Trigger: ATCCCAGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCTGTGGCAGCCCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp CACGCCCGTGGGAGAGAGTGGCTCCACGAAGTGGACTaGTGCCTTCACTTTGTGGTCCTGCGAGTTATTCTT +
Preference number: 6 (lower is better)
Translates to: HARGREWLHEVD*CLHFVVLRVIL
Trigger: AAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp GTGGCCGTGGGGTGTGGCTGGTTCTGTGGGGTCAGATTAACAATGTaGGATGCCAAACTGTCTTTGCTGATGGAGCGGGCCAAGCTGATG +
Preference number: 6 (lower is better)
Translates to: VAVGCGWFCGVRLTM*DAKLSLLMERAKLM
Trigger: CATCAGCTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATCCAACATTGTTAATCTGACCCCACAGAACCAGCCACACCCCACGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp AGAGCCTGGCACTGGGACTGTGGGGGACTTCATCAGAAGCTGCTCTaGCTGCTGAGAGATTTTCAGGATGGCCTGCTGCAGCGTACTGAT +
Preference number: 6 (lower is better)
Translates to: RAWHWDCGGLHQKLL*LLRDFQDGLLQRTD
Trigger: ATCAGTACGCTGCAGCAGGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp GCCCGTGGGAGAGAGTGGCTCCACGAAGTGGACTGGTaGCTTCACTTTGTGGTCCTGCGAGTTATTCTTAGA +
Preference number: 6 (lower is better)
Translates to: ARGREWLHEVDW*LHFVVLRVILR
Trigger: TCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp AGTGGCTCCACGAAGTGGACTGGTGCCTTCACTTTGTaGTCCTGCGAGTTATTCTTAGAGCCTGGCACTGGG +
Preference number: 6 (lower is better)
Translates to: SGSTKWTGAFTL*SCELFLEPGTG
Trigger: CCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GCGACAGGATGGCTCTGTAGATGGCAGCTGGCGGCTTaGGGTTCACTTACAGGCACTAACTTCCAATACCAC +
Preference number: 6 (lower is better)
Translates to: ATGWLCRWQLAA*GSLTGTNFQYH
Trigger: GTGGTATTGGAAGTTAGTGCCTGTAAGTGAACCCCAAGCCGCCAGCTGCCATCTACAGAGCCATCCTGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468150.1
CDS CAA 72 bp CACTGGGACTGTGGGGGACTTCATCAGAAGCTGCTCTaGCTGCTGAGAGATTTTCAGGATGGCCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: HWDCGGLHQKLL*LLRDFQDGLLQ
Trigger: CTGCAGCAGGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCTTCTGATGAAGTCCCCCACAGTCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp CTGAAAACCACAGGATGGGCCTCACCCATGAAATCGTaGTCGGCTTCCTCTATGTCCACCACATCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: LKTTGWASPMKS*SASSMSTTSES
Trigger: TGACTCGGATGTGGTGGACATAGAGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp TCCACGAAGTGGACTGGTGCCTTCACTTTGTGGTCCTaGGAGTTATTCTTAGAGCCTGGCACTGGGACTGTG +
Preference number: 6 (lower is better)
Translates to: STKWTGAFTLWS*ELFLEPGTGTV
Trigger: CACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp GGGTGTGGCTGGTTCTGTGGGGTCAGATTAACAATGTaGGATGCCAAACTGTCTTTGCTGATGGAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: GCGWFCGVRLTM*DAKLSLLMERA
Trigger: GGCCCGCTCCATCAGCAAAGACAGTTTGGCATCCAACATTGTTAATCTGACCCCACAGAACCAGCCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp GAGAGTGGCTCCACGAAGTGGACTGGTGCCTTCACTTaGTGGTCCTGCGAGTTATTCTTAGAGCCTGGCACT +
Preference number: 6 (lower is better)
Translates to: ESGSTKWTGAFT*WSCELFLEPGT
Trigger: AGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCACCAGTCCACTTCGTGGAGCCACTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TGGTTCTGTGGGGTCAGATTAACAATGTTGGATGCCAAACTGTCTTaGCTGATGGAGCGGGCCAAGCTGATGCTGTCGCCAGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: WFCGVRLTMLDAKLS*LMERAKLMLSPELG
Trigger: TCCCAGCTCTGGCGACAGCATCAGCTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATCCAACATTGTTAATCTGACCCCACAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp GTCTCTCATCAAATCCTCCAACAACGGGAAGTAGGGTaGCTGCCTAGCAGAAAGGTGCTCTCGTCGATAGCG +
Preference number: 6 (lower is better)
Translates to: VSHQILQQREVG*LPSRKVLSSIA
Trigger: CGCTATCGACGAGAGCACCTTTCTGCTAGGCAGTCACCCTACTTCCCGTTGTTGGAGGATTTGATGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389532.9
ENST00000409386.3
CDS CCA 72 bp TTTGTGGTCCTGCGAGTTATTCTTAGAGCCTGGCACTaGGACTGTGGGGGACTTCATCAGAAGCTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: FVVLRVILRAWH*DCGGLHQKLLL
Trigger: CAAGAGCAGCTTCTGATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp TTAGAAAGCCTTTCCCCAAACTCTCACGCCCGTCCCTaGGATTCTGACTCCACAGGCTCTTCCAAGAACTCT +
Preference number: 6 (lower is better)
Translates to: LESLSPNSHARP*DSDSTGSSKNS
Trigger: AGAGTTCTTGGAAGAGCCTGTGGAGTCAGAATCCCAGGGACGGGCGTGAGAGTTTGGGGAAAGGCTTTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS CAA 72 bp CAGCTCGTGCAGAGCCACAGGGTCTTTTGCTTTATGTaGCTGAGCAAAGGCCAGGCTCTCTTTGTCCACATC +
Preference number: 6 (lower is better)
Translates to: QLVQSHRVFCFM*LSKGQALFVHI
Trigger: GATGTGGACAAAGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTCTGCACGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp ATTTCTCTCCAGCTCGTGCAGAGCCACAGGGTCTTTTGCTTTATGTaGCTGAGCAAAGGCCAGGCTCTCTTTGTCCACATCCTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: ISLQLVQSHRVFCFM*LSKGQALFVHILWL
Trigger: GAGCCACAGGATGTGGACAAAGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp GAGGAGCTGGACCCCACCTCCTTCACACTCGCATCCAGAACTTCTTaGAGGCTCATCTGCTCCGAAAGAATGTTGGCATCTTTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: EELDPTSFTLASRTS*RLICSERMLASLEE
Trigger: CTCTTCCAAAGATGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGCGAGTGTGAAGGAGGTGGGGTCCAGCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp TATCAGCTGCCAGAGACAGAAACAGACGACGGTTCATaGACGGATTCCGACAGACAAGTACCTGTCCCCTGT +
Preference number: 6 (lower is better)
Translates to: YQLPETETDDGS*TDSDRQVPVPC
Trigger: ACAGGGGACAGGTACTTGTCTGTCGGAATCCGTTCATGAACCGTCGTCTGTTTCTGTCTCTGGCAGCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487868.1
CDS GCA 72 bp TGGCTGGTTCTGTGGGGTCAGATTAACAATGTTGGATaGCAAACTGTCTTTGCTGATGGAGCGGGCCAAGCT +
Preference number: 6 (lower is better)
Translates to: WLVLWGQINNVG*QTVFADGAGQA
Trigger: AGCTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATCCAACATTGTTAATCTGACCCCACAGAACCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GATTTCTGCTGTTTCTGTCTCAGTGGCAATAAAGGATaGGATGGGCTGAAGGCAGCAGTTCCTTTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: DFCCFCLSGNKG*DGLKAAVPFPR
Trigger: CCTCGGGAAAGGAACTGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACTGAGACAGAAACAGCAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
CDS CCA 72 bp GATTTCTGCTGTTTCTGTCTCAGTGGCAATAAAGGATaGGATGGGCTGAAGGCAGCAGTTCCTTTCCCGCAC +
Preference number: 6 (lower is better)
Translates to: DFCCFCLSGNKG*DGLKAAVPFPH
Trigger: GTGCGGGAAAGGAACTGCTGCCTTCAGCCCATCCCATCCTTTATTGCCACTGAGACAGAAACAGCAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483991.5
CDS CAA 72 bp GACCCCACCTCCTTCACACTCGCATCCAGAACTTCTTaGAGGCTCATCTGCTCCGAAAGAATGTTGGCATCT +
Preference number: 6 (lower is better)
Translates to: DPTSFTLASRTS*RLICSERMLAS
Trigger: AGATGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGCGAGTGTGAAGGAGGTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TCAGAATCCTGCCTGAGGAGAGTCCACGGCTCTGAATCGTGGGAGTaGGGGCTTTTTGAACAACTAACATATAACCTTCCCTCGGTGTCT +
Preference number: 6 (lower is better)
Translates to: SESCLRRVHGSESWE*GLFEQLTYNLPSVS
Trigger: AGACACCGAGGGAAGGTTATATGTTAGTTGTTCAAAAAGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp ACCCCACCTCCTTCACACTCGCATCCAGAACTTCTTTaGGGCTCATCTGCTCCGAAAGAATGTTGGCATCTT +
Preference number: 6 (lower is better)
Translates to: TPPPSHSHPELL*GSSAPKECWHL
Trigger: AAGATGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGCGAGTGTGAAGGAGGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp AGATCACCTTATTTCTCTCCAGCTCGTGCAGAGCCACAGGGTCTTTaGCTTTATGTTGCTGAGCAAAGGCCAGGCTCTCTTTGTCCACAT +
Preference number: 6 (lower is better)
Translates to: RSPYFSPARAEPQGL*LYVAEQRPGSLCPH
Trigger: ATGTGGACAAAGAGAGCCTGGCCTTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAATAAGGTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp TGTGCGAGAAACATGGAACCACTGGAGAGTGCTTTCTaGTACTCTAGGCTCTCAAGGAAACCATTGCCAACC +
Preference number: 6 (lower is better)
Translates to: CARNMEPLESAF*YSRLSRKPLPT
Trigger: GGTTGGCAATGGTTTCCTTGAGAGCCTAGAGTATCAGAAAGCACTCTCCAGTGGTTCCATGTTTCTCGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS CCA 72 bp TTCATCCTCCTTGGTGATCACCTGCTTCTCTTTCGCTaGCTTAAGAACTGCTGGCATCAAAGGCTCCAAGAA +
Preference number: 6 (lower is better)
Translates to: FILLGDHLLLFR*LKNCWHQRLQE
Trigger: TTCTTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCAGCGAAAGAGAAGCAGGTGATCACCAAGGAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CCA 72 bp GAATCCTGCCTGAGGAGAGTCCACGGCTCTGAATCGTaGGAGTTGGGGCTTTTTGAACAACTAACATATAAC +
Preference number: 6 (lower is better)
Translates to: ESCLRRVHGSES*ELGLFEQLTYN
Trigger: GTTATATGTTAGTTGTTCAAAAAGCCCCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TCTTCATGTTCCTTCACCTTCATGTCCTCCTGCAGTTaGGCCGACTCTTCCTCCCCAATGTATCTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SSCSFTFMSSCS*ADSSSPMYLLK
Trigger: TTTCAGCAGATACATTGGGGAGGAAGAGTCGGCCAAACTGCAGGAGGACATGAAGGTGAAGGAACATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp TCATCTTTGTCTTCATGTTCCTTCACCTTCATGTCCTCCTGCAGTTaGGCCGACTCTTCCTCCCCAATGTATCTGCTGAAAACCACAGGA +
Preference number: 6 (lower is better)
Translates to: SSLSSCSFTFMSSCS*ADSSSPMYLLKTTG
Trigger: TCCTGTGGTTTTCAGCAGATACATTGGGGAGGAAGAGTCGGCCAAACTGCAGGAGGACATGAAGGTGAAGGAACATGAAGACAAAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS GCA 72 bp GTGCTTTCTGATACTCTAGGCTCTCAAGGAAACCATTaGCAACCTGGGGAATATCTGTCACTCACCGTCTTT +
Preference number: 6 (lower is better)
Translates to: VLSDTLGSQGNH*QPGEYLSLTVF
Trigger: AAAGACGGTGAGTGACAGATATTCCCCAGGTTGGCAATGGTTTCCTTGAGAGCCTAGAGTATCAGAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492174.1
CDS CAA 72 bp AGAACTTCTTTGAGGCTCATCTGCTCCGAAAGAATGTaGGCATCTTTGGAAGAGGACAGAGTAAGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: RTSLRLICSERM*ASLEEDRVSVR
Trigger: GCGGACACTTACTCTGTCCTCTTCCAAAGATGCCAACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TGGATTGTGAGTGCGTCCACACTGACAGACATGGTTTaGGCTGGGATCAAGTTAAACTGTTTTCGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: WIVSASTLTDMV*AGIKLNCFRSE
Trigger: CTCAGACCGAAAACAGTTTAACTTGATCCCAGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 90 bp AGGTGGTTGTGGATTGTGAGTGCGTCCACACTGACAGACATGGTTTaGGCTGGGATCAAGTTAAACTGTTTTCGGTCTGAGCTGTATTTA +
Preference number: 6 (lower is better)
Translates to: RWLWIVSASTLTDMV*AGIKLNCFRSELYL
Trigger: TAAATACAGCTCAGACCGAAAACAGTTTAACTTGATCCCAGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS TCA 72 bp GCAATGGGATATGGCATTGTGAATAATCGGCTTGTTTaGTTTACTACTGGGCTCCTTAAAGAGCTTGGGACC +
Preference number: 6 (lower is better)
Translates to: AMGYGIVNNRLV*FTTGLLKELGT
Trigger: GGTCCCAAGCTCTTTAAGGAGCCCAGTAGTAAATCAAACAAGCCGATTATTCACAATGCCATATCCCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000482664.5
ENST00000483991.5
ENST00000487868.1
CDS CCA 72 bp ATACAGTTTGTCGATCATTTTCTTGGTGATGTTCTTTaGCCCCGTGCCAGTGAGTTTGTAGATTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: IQFVDHFLGDVL*PRASEFVDFLS
Trigger: ACTGAGGAAATCTACAAACTCACTGGCACGGGGCCAAAGAACATCACCAAGAAAATGATCGACAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TCTGAGCTGTATTTATACAGTTTGTCGATCATTTTCTaGGTGATGTTCTTTGGCCCCGTGCCAGTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: SELYLYSLSIIF*VMFFGPVPVSL
Trigger: CAAACTCACTGGCACGGGGCCAAAGAACATCACCAAGAAAATGATCGACAAACTGTATAAATACAGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5
CDS CAA 72 bp TTAAACTGTTTTCGGTCTGAGCTGTATTTATACAGTTaGTCGATCATTTTCTTGGTGATGTTCTTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: LNCFRSELYLYS*SIIFLVMFFGP
Trigger: GGGGCCAAAGAACATCACCAAGAAAATGATCGACAAACTGTATAAATACAGCTCAGACCGAAAACAGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312405.10
ENST00000389532.9
ENST00000409386.3
ENST00000483991.5