RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMKV (Homo sapiens)

Ensembl gene IDs: ENSG00000164076

Ensembl transcript IDs: ENST00000296471.11, ENST00000463537.5, ENST00000466535.5, ENST00000466940.5, ENST00000467248.5, ENST00000472895.5, ENST00000475665.5, ENST00000476105.1, ENST00000477224.6, ENST00000478149.5, ENST00000479704.5, ENST00000480398.2, ENST00000483811.5, ENST00000487726.5, ENST00000488336.5, ENST00000498324.5, ENST00000620470.4

Found 714 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGTCTGCAGCCCCGGGGGTGGCAGTGTCTGTGGCTGAGGCCGACTaGGCTGCAGCCGTGCTGGACTGCTCTGGTGCCCGGAGCCGTTTC +
Preference number: 1 (lower is better)
Translates to: RSAAPGVAVSVAEAD*AAAVLDCSGARSRF
Trigger: GAAACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCCAGTCGGCCTCAGCCACAGACACTGCCACCCCCGGGGCTGCAGACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR GCA 90 bp GGCTGTGCTGTCCGGCTGGGCCATAGCCGGCTCAGGGGTGGCAGCTaGCTTGGTGGCCAGCATGGCACTGCTTTGGGTGGTGGGCACAGT +
Preference number: 1 (lower is better)
Translates to: GCAVRLGHSRLRGGS*LGGQHGTALGGGHS
Trigger: ACTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAGCCGGCTATGGCCCAGCCGGACAGCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CCA 90 bp GGCTCAGGGGTGGCAGCTGCCTTGGTGGCCAGCATGGCACTGCTTTaGGTGGTGGGCACAGTGCTCTCTTCTGTGGCTGGTGTGGCTCTC +
Preference number: 1 (lower is better)
Translates to: GSGVAAALVASMALL*VVGTVLSSVAGVAL
Trigger: GAGAGCCACACCAGCCACAGAAGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CCA 90 bp AGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTaGCTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTG +
Preference number: 1 (lower is better)
Translates to: RAGPPRSAEQGRGPM*LPIQAVVGSDKGHL
Trigger: CAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR CCA 90 bp CCTCCCTGTTTGGCCCAGGGTAAGGACCCAGTAAGGCTGGGACACTaGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACG +
Preference number: 1 (lower is better)
Translates to: PPCLAQGKDPVRLGH*VLGLYSALPGLIAT
Trigger: CGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACCCTGGGCCAAACAGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR TCA 90 bp AGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTaGCAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAG +
Preference number: 1 (lower is better)
Translates to: RARTNVAAYPGCGRV*QRAPVRSLPQETGE
Trigger: CTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR GCA 90 bp ATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTTGTGACCAGGTCTTTGGCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: IHSWEMASSAVIRWS*STSISLVTRSLAAC
Trigger: GCAGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR CCA 90 bp CCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTaGTCTTGCTCCACCTCCATCAGCCTTGTGACCAGGTCTTTGGCT +
Preference number: 1 (lower is better)
Translates to: PEIHSWEMASSAVIR*SCSTSISLVTRSLA
Trigger: AGCCAAAGACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR TCA 90 bp TATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCA +
Preference number: 1 (lower is better)
Translates to: YCHAASPLGWRGLVG*DCRRWASRKSKEVS
Trigger: TGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR GCA 90 bp AGAAGCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGAC +
Preference number: 1 (lower is better)
Translates to: RSSIARNPLMGDGLF*SDPLVLLHLHQPCD
Trigger: GTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR TCA 90 bp GTAAACCAGGTTCTCCAGCTTGAGATTCCTGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTT +
Preference number: 1 (lower is better)
Translates to: VNQVLQLEIPVHDLE*VQIGHGLQDLPYHV
Trigger: AACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATTTGCACTCACTCAAGATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR GCA 90 bp CCCTGTAAAGGGCAAACCTCCAAATCAGATTATGAGTTATTGCCATaGAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGGCTGAGATTG +
Preference number: 1 (lower is better)
Translates to: PCKGQTSKSDYELLP*SKPPRVERTCGLRL
Trigger: CAATCTCAGCCCACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTGATTTGGAGGTTTGCCCTTTACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR CCA 90 bp CGGACAGCCTTCTTCCACTTGGCCCTGGCAAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTGATGTTCTTATCAGAAGCAGCATTG +
Preference number: 1 (lower is better)
Translates to: RTAFFHLALAKFFSI*AQTPSLMFLSEAAL
Trigger: CAATGCTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTTTGCCAGGGCCAAGTGGAAGAAGGCTGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR GCA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: KTADRASLEDQLSGQGRPATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 2 (lower is better)
Translates to: EPKTADRASLEDQLSGQGGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR CAA 90 bp GTGCTGTCCGGCTGGGCCATAGCCGGCTCAGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTGCTTTGGGTGGTGGGCACAGTGCTC +
Preference number: 2 (lower is better)
Translates to: VLSGWAIAGSGVAAA*VASMALLWVVGTVL
Trigger: GAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAGCCGGCTATGGCCCAGCCGGACAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR CCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 2 (lower is better)
Translates to: TTECRARARTNVAAYPGCGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTTGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 2 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 2 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GTHLHVQEPKTADRASLEETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 2 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 2 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGCATTCTCTCCACTCCTaGGGACCTCCACAGCTAGTG +
Preference number: 2 (lower is better)
Translates to: REKGRTTTECRARARTNVHSLHS*GPPQLV
Trigger: CACTAGCTGTGGAGGTCCTCAGGAGTGGAGAGAATG...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGTCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 2 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLSLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGAACTCAATGTGGCTCTaGGGCACCTGGGCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: REKGRTTTECRARARTNVNSMWL*GTWASD
Trigger: ATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTT...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCTACAGGGCAGCCCACTaGAGGACTCGGAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLYRAAH*RTRKGR
Trigger: CCTGCCTTTCCGAGTCCTGCAGTGGGCTGCCCTGTA...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp GCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGG +
Preference number: 2 (lower is better)
Translates to: ALPEIHSWEMASSAVIRWGRPYR*RPTTSG
Trigger: CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCC...CCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTAGTTATGCCCCACTaGGATGTGGGGGCATGGGGG +
Preference number: 2 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASLVMPH*DVGAWG
Trigger: CCCCCATGCCCCCACATCCCAGTGGGGCATAACTAG...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTACCCAAGTTTAGGGCCTaGGAGAGTGTGGGACCTGCA +
Preference number: 2 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVPKFRA*ESVGPA
Trigger: TGCAGGTCCCACACTCTCCCAGGCCCTAAACTTGGG...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGTGGGACACTGGGTGCTaGGCTTGTACTCTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRWDTGC*ACTLPC
Trigger: GCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGAGCAGGAGCCCCCTaGGTATCCCTAGAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLRAGAP*VSLEQH
Trigger: ATGCTGCTCTAGGGATACTCAGGGGGCTCCTGCTCT...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLEATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCGCTGGGCTTGTACTCTaGCCTGCCAGGTCTCATTGC +
Preference number: 2 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLAGLVL*PARSHC
Trigger: GCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGCTGGGCTTGTACTCTaGCCTGCCAGGTCTCATTGC +
Preference number: 2 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASAGLVL*PARSHC
Trigger: GCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGCACACACCTTCATGTaGAGGAGCCTAAGACCGCTG +
Preference number: 2 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASAHTFM*RSLRPL
Trigger: CAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGCTTGTACTCTGCCCTaGCAGGTCTCATTGCCACGT +
Preference number: 2 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASACTLP*QVSLPR
Trigger: ACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCTGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 2 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPLTGPR*RTSSQG
Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCGAAAGGTGGATTGCCTaGAAGCAGGATGTACATGAT +
Preference number: 2 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLERWIA*KQDVHD
Trigger: ATCATGTACATCCTGCTTTCAGGCAATCCACCTTTC...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR GCA 90 bp CACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCCTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 2 (lower is better)
Translates to: HSWEMASSAVIRWSCSTSLAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...GGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CAA 90 bp AATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCTTGTGACCAGGTCTTTGGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: NPLMGDGLFCSDPLV*LHLHQPCDQVFGCL
Trigger: CAGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR TCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTACATTCTCTCCACTCCTaGGGACCTCCACAGCTAGTG +
Preference number: 2 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLHSLHS*GPPQLV
Trigger: CACTAGCTGTGGAGGTCCTCAGGAGTGGAGAGAATG...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 2 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCSLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLRGLVG*DCRRWA
Trigger: TGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCCCTGCCAGGTCTCATTaGCACGTCCTAATTGTTCCT +
Preference number: 2 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLPARSH*HVLIVP
Trigger: AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGG...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGTGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 2 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: HTALPFCILYTSLYLLLELTGPR*RTSSQG
Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTTGGGACACTGGGTGCTaGGCTTGTACTCTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLWDTGC*ACTLPC
Trigger: GCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGATCAGCCCTCCCTGTTTaGCCCAGGGTAAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRSALPV*PRVRTQ
Trigger: CTGGGTCCTTACCCTGGGCCAAACAGGGAGGGCTGA...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR CAA 90 bp TGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAG +
Preference number: 2 (lower is better)
Translates to: WDTGCWACTLPCQVS*PRPNCSSFPLEAHE
Trigger: CTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCAGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 2 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCATCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 2 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRASLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGATTTCATTGTTGAACTaGGCAGAAAATCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: REKGRTTTECRARARTNVISLLN*AENLPL
Trigger: CAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAAT...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGTAAGGCTGGGACACTaGGTGCTGGGCTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPVRLGH*VLGLYS
Trigger: AGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTAC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 2 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACCCAAGTTTAGGGCCTaGGAGAGTGTGGGACCTGCA +
Preference number: 2 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPPKFRA*ESVGPA
Trigger: TGCAGGTCCCACACTCTCCCAGGCCCTAAACTTGGG...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp AGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGTCAGCCCTCCCTGTTTaGCCCAGGGTAAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: SLPQETGEFNPTSSSQKKSALPV*PRVRTQ
Trigger: CTGGGTCCTTACCCTGGGCCAAACAGGGAGGGCTGA...CTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 2 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCAAAAATGGAAGCTTCTaGCCTCCTACTCATTCTCTC +
Preference number: 2 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASKNGSF*PPTHSL
Trigger: GAGAGAATGAGTAGGAGGGCAGAAGCTTCCATTTTT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCTACAGGGCAGCCCACTaGAGGACTCGGAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLYRAAH*RTRKGR
Trigger: CCTGCCTTTCCGAGTCCTGCAGTGGGCTGCCCTGTA...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACTGAGCAGAAAATCTaGCCCTGTAAAGGGCAAACC +
Preference number: 2 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLTEQKI*PCKGQT
Trigger: GGTTTGCCCTTTACAGGGGCAGATTTTCTGCTCAGT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGTAAGGCTGGGACACTaGGTGCTGGGCTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFVRLGH*VLGLYS
Trigger: AGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTAC...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR CAA 90 bp ATCTGCCCCTGTAAAGGGCAAACCTCCAAATCAGATTATGAGTTATaGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: ICPCKGQTSKSDYEL*PCSKPPRVERTCGL
Trigger: CAGCCCACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTGATTTGGAGGTTTGCCCTTTACAGGGGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTTCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGC +
Preference number: 2 (lower is better)
Translates to: TTECRARARTNVAAYPGCSSFHC*TEQKIC
Trigger: GCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGA...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTGCCAGGTCTCATTaGCACGTCCTAATTGTTCCT +
Preference number: 2 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLPARSH*HVLIVP
Trigger: AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGG...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CCA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGACCCAAGTTTAGGGCCTaGGAGAGTGTGGGACCTGCA +
Preference number: 2 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRPKFRA*ESVGPA
Trigger: TGCAGGTCCCACACTCTCCCAGGCCCTAAACTTGGG...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp GAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTCATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 2 (lower is better)
Translates to: EMASSAVIRWSCSTSISLHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR CCA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCACCCAAGTTTAGGGCCTaGGAGAGTGTGGGACCTGCA +
Preference number: 2 (lower is better)
Translates to: VPSLDLNILPYLSASSIPPKFRA*ESVGPA
Trigger: TGCAGGTCCCACACTCTCCCAGGCCCTAAACTTGGG...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTACTCCAAATCAGATTATaGGTTATTGCCATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLLQIRL*VIAMQQ
Trigger: TTGCTGCATGGCAATAACTCATAATCTGATTTGGAG...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp ATCTGGGCACAGACACCATCCTTGATGTTCTTATCAGAAGCAGCATTGCCAGAAGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 2 (lower is better)
Translates to: IWAQTPSLMFLSEAALPEVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...TTCTGGCAATGCTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGCCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR GCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGACAGATTATGAGTTATTaGCATGCAGCAAGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRQIMSY*HAASPL
Trigger: TAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp CCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 2 (lower is better)
Translates to: PEIHSWEMASSAVIRWSCRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...GCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR TCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCCTCCAAATCAGATTATaGGTTATTGCCATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPLQIRL*VIAMQQ
Trigger: TTGCTGCATGGCAATAACTCATAATCTGATTTGGAG...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp AGTCACCAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 2 (lower is better)
Translates to: SHQPGSCGRDSYHGSHNHTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...ATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR TCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGACTCCAAATCAGATTATaGGTTATTGCCATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRLQIRL*VIAMQQ
Trigger: TTGCTGCATGGCAATAACTCATAATCTGATTTGGAG...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR TCA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGTCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGC +
Preference number: 2 (lower is better)
Translates to: CGSEAPGPLIEVSCRKRESSFHC*TEQKIC
Trigger: GCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGA...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTAAAAATGGAAGCTTCTaGCCTCCTACTCATTCTCTC +
Preference number: 2 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFKNGSF*PPTHSL
Trigger: GAGAGAATGAGTAGGAGGGCAGAAGCTTCCATTTTT...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp AGAAGCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 2 (lower is better)
Translates to: RSSIARNPLMGDGLFCSDRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...ATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR TCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCATTTCATTGTTGAACTaGGCAGAAAATCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLISLLN*AENLPL
Trigger: CAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAAT...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR GCA 90 bp ATCTGGGCACAGACACCATCCTTGATGTTCTTATCAGAAGCAGCATTGCCAGAACACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 2 (lower is better)
Translates to: IWAQTPSLMFLSEAALPEHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...TTCTGGCAATGCTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGCCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR GCA 90 bp ATCTGGGCACAGACACCATCCTTGATGTTCTTATCAGAAGCAGCATTGCCAGAACATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 2 (lower is better)
Translates to: IWAQTPSLMFLSEAALPEHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...TTCTGGCAATGCTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGCCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR GCA 72 bp CCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGGGCCAGATACTCGGGG +
Preference number: 3 (lower is better)
Translates to: PMAQQSTGRPYR*RPTTSGARYSG
Trigger: CCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR GCA 72 bp GGCCGACTGGGCTGCAGCCGTGCTGGACTGCTCTGGTaGCCGGAGCCGTTTCATGAGGGTGGTCACTCGGAC +
Preference number: 3 (lower is better)
Translates to: GRLGCSRAGLLW*PEPFHEGGHSD
Trigger: GTCCGAGTGACCACCCTCATGAAACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCCAGTCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CCA 72 bp CCAGCAGCCTCTTCCCCTTTACTAGAGGGTGGAGCCTaGCCTGTGGCGCCCTCTGGGGCTGTGCTGTCCGGC +
Preference number: 3 (lower is better)
Translates to: PAASSPLLEGGA*PVAPSGAVLSG
Trigger: GCCGGACAGCACAGCCCCAGAGGGCGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGGGAAGAGGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR CAA 90 bp GCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGGGTCCCACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 3 (lower is better)
Translates to: ASIPLPAYHLWGQILGGPTCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...GGGACCCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CCA 72 bp ATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTT +
Preference number: 3 (lower is better)
Translates to: MCRSLRPLTGPR*RTSSQGKAAQV
Trigger: AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR TCA 72 bp CCGTGCTGGACTGCTCTGGTGCCCGGAGCCGTTTCATaGGGGTGGTCACTCGGACAGCCTTCTTCCACTTGG +
Preference number: 3 (lower is better)
Translates to: PCWTALVPGAVS*GWSLGQPSSTW
Trigger: CCAAGTGGAAGAAGGCTGTCCGAGTGACCACCCTCATGAAACGGCTCCGGGCACCAGAGCAGTCCAGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR CAA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 3 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLTRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CCA 72 bp CCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTaGCTGCCTATCCAGGCTGTGGTAGGGTCTGACAAA +
Preference number: 3 (lower is better)
Translates to: PPRSAEQGRGPM*LPIQAVVGSDK
Trigger: TTTGTCAGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR GCA 72 bp GGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTaGCAGGTCTCATTGCCACGTCCTAATTGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: GWDTGCWACTLP*QVSLPRPNCSS
Trigger: GGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR GCA 72 bp AATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: NRPRPPGLAVPR*LCLAPSSSPGP
Trigger: TGGACCAGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR TCA 72 bp GCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCATCTAGGAAGAGCAAG +
Preference number: 3 (lower is better)
Translates to: AASPLGWRGLVG*DCRRWASRKSK
Trigger: CTTGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACCCTAGGGGGCTTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR TCA 72 bp ACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTaGCAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: TNVAAYPGCGRV*QRAPVRSLPQE
Trigger: TTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAGCCACATTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CAA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTTCAGATTATGAGTTATaGCCATGCAGCAAGCCCCCT +
Preference number: 3 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSSDYEL*PCSKPP
Trigger: AGGGGGCTTGCTGCATGGCAATAACTCATAATCTGA...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR GCA 72 bp TGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTTGTGACCAGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: WEMASSAVIRWS*STSISLVTRSL
Trigger: CAAAGACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR TCA 72 bp CAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCACCTCCATCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: QKSTHGRWPLLQ*SAGLAPPPSAL
Trigger: CAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR TCA 72 bp GTTCTCCAGCTTGAGATTCCTGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGCCTCCAGGACTTGCCG +
Preference number: 3 (lower is better)
Translates to: VLQLEIPVHDLE*VQIGHGLQDLP
Trigger: CGGCAAGTCCTGGAGGCCGTGGCCTATTTGCACTCACTCAAGATCGTGCACAGGAATCTCAAGCTGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR GCA 72 bp ATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTGCTCCACCTCCATCAG +
Preference number: 3 (lower is better)
Translates to: IARNPLMGDGLF*SDPLVLLHLHQ
Trigger: CTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR CAA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTCCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCC +
Preference number: 3 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFPCQVS*PRPNCS
Trigger: GGAACAATTAGGACGTGGCAATGAGACCTGGCAGGG...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CAA 90 bp GGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: GDGLFCSDPLVLLHLHQPAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR GCA 72 bp GGGCAAACCTCCAAATCAGATTATGAGTTATTGCCATaGAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGG +
Preference number: 3 (lower is better)
Translates to: GQTSKSDYELLP*SKPPRVERTCG
Trigger: CCCACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTGATTTGGAGGTTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CAA 90 bp AGAAGCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 3 (lower is better)
Translates to: RSSIARNPLMGDGLFCSDLVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...ATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR-3UTR CAA 90 bp CTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCTCCTCGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 3 (lower is better)
Translates to: LAEEILIMVLIIIFFHLLAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...GAGGAGGTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR-3UTR CAA 90 bp CAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 3 (lower is better)
Translates to: QPGSCGRDSYHGSHNHLLHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...AAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR GCA 72 bp GTAAAGGGCAAACCTCCAAATCAGATTATGAGTTATTaGCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTT +
Preference number: 3 (lower is better)
Translates to: VKGKPPNQIMSY*HAASPLGWRGL
Trigger: AAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTGATTTGGAGGTTTGCCCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR-3UTR CAA 90 bp TATCATGGTTCTCATAATCATCTTCTTCCACCTCCTCATAGAAAGGTGGATTGCGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 3 (lower is better)
Translates to: YHGSHNHLLPPPHRKVDCVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...GCAATCCACCTTTCTATGAGGAGGTGGAAGAAGATGATTATGAGAACCATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
3UTR TCA 72 bp GCTGTAGAAAGAGGGAGTTCCTCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGCCCCTGTAAAGGGCAA +
Preference number: 3 (lower is better)
Translates to: AVERGSSSSFHC*TEQKICPCKGQ
Trigger: TTGCCCTTTACAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGAGGAACTCCCTCTTTCTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR GCA 72 bp ATGGAGAGTCAAACTCATAGTCACCAGCCAGGATCTTaGGGAAGAGATTCTTATCATGGTTCTCATAATCAT +
Preference number: 3 (lower is better)
Translates to: MESQTHSHQPGS*GRDSYHGSHNH
Trigger: ATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACTATGAGTTTGACTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp GCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCGCTGTGCTGTCCGGCTaGGCCATAGCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AQQSTGRPYRCRPTTSGAAVLSG*AIAGSG
Trigger: CCCTGAGCCGGCTATGGCCCAGCCGGACAGCACAGC...GGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTGCAGCCGTGCTGGACTaGTCTGGTGCCCGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVAAVLD*SGARSR
Trigger: ACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGC...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTGCTGTGCTGTCCGGCTaGGCCATAGCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVAVLSG*AIAGSG
Trigger: CCCTGAGCCGGCTATGGCCCAGCCGGACAGCACAGC...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGCCTGTGGCGCCCTCTaGGGCTGTGCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPACGAL*GCAVRL
Trigger: CAGCCGGACAGCACAGCCCCAGAGGGCGCCACAGGC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
3UTR CAA 72 bp GGCTGGGCCATAGCCGGCTCAGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTGCTTTGGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GWAIAGSGVAAA*VASMALLWVVG
Trigger: GCCCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAGCCGGCTATGGCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGGCAGTGTCTGTGGCTaGGGCCGACTGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPGSVCG*GRLGCS
Trigger: GCTGCAGCCCAGTCGGCCTCAGCCACAGACACTGCC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AAGCCACAAGGAATCCATGCAGGGGCTGGGGCCGGCCCTGCCACTGGCCTGCCCGGCTGGGACACTGGGTaGTGGGCTTGTACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KPQGIHAGAGAGPATGLPGWDTG*WACTLP
Trigger: GGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCC...GGGCAGGCCAGTGGCAGGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLGRPYR*RPTTSG
Trigger: CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCC...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp GTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGCTGCAGCCGTGCTaGACTGCTCTGGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: VHRASIPLPAYHLWGQILGLQPC*TALVPG
Trigger: TCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCC...GAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCGTGGCTGAGGCCGACTaGGCTGCAGCCGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLVAEAD*AAAVLD
Trigger: GTCCAGCACGGCTGCAGCCCAGTCGGCCTCAGCCAC...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCGCTGTGCTGTCCGGCTaGGCCATAGCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EPKTADRASLEDQLSGQGAVLSG*AIAGSG
Trigger: CCCTGAGCCGGCTATGGCCCAGCCGGACAGCACAGC...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTCAGCTTTCCGCACCTTaGGGCCGTCCCGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVQLSAP*GRPASG
Trigger: TCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTG...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTCTCAGGGGTGGCAGCTaGCTTGGTGGCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPLRGGS*LGGQHG
Trigger: GCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAG...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ADRASLEDQLSGQGRPSLATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...TAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGGGTGGCAGTGTCTGTaGCTGAGGCCGACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPGWQCL*LRPTGL
Trigger: CAGCCCAGTCGGCCTCAGCCACAGACACTGCCACCC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTGCCTGTGGCGCCCTCTaGGGCTGTGCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSACGAL*GCAVRL
Trigger: CAGCCGGACAGCACAGCCCCAGAGGGCGCCACAGGC...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCCCGGAGCCGTTTCATaGGGGTGGTCACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: EPKTADRASLEDQLSGQGPGAVS*GWSLGQ
Trigger: CTGTCCGAGTGACCACCCTCATGAAACGGCTCCGGG...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGCAGCCGTGCTGGACTaGTCTGGTGCCCGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCAAVLD*SGARSR
Trigger: ACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGC...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTGRPYR*RPTTSG
Trigger: CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCC...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTGTGGCTGAGGCCGACTaGGCTGCAGCCGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSVAEAD*AAAVLD
Trigger: GTCCAGCACGGCTGCAGCCCAGTCGGCCTCAGCCAC...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGCTTCCATCGGTGGCTaGGGTGACACTGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: PSSPQGVHTAAGLPPLGPASIGG*GDTAIS
Trigger: ACTGATGGCAGTGTCACCCCAGCCACCGATGGAAGC...TGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTACTAGAGGGTGGAGCCTaGCCTGTGGCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVLEGGA*PVAPSG
Trigger: CCCAGAGGGCGCCACAGGCCAGGCTCCACCCTCTAG...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCCTAGAGGGTGGAGCCTaGCCTGTGGCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTLEGGA*PVAPSG
Trigger: CCCAGAGGGCGCCACAGGCCAGGCTCCACCCTCTAG...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAGGGCGAGGACCAATGTaGCTGCCTATCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KTADRASLEDQLSGQGRPGRGPM*LPIQAV
Trigger: CACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCC...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCCTCAGGGGTGGCAGCTaGCTTGGTGGCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTLRGGS*LGGQHG
Trigger: GCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAG...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTCTCAGGGGTGGCAGCTaGCTTGGTGGCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSLRGGS*LGGQHG
Trigger: GCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAG...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AAGCCACAAGGAATCCATGCAGGGGCTGGGGCCGGCCCTGCCACTGGCCTGCCCGCTTGTACTCTGCCCTaGCAGGTCTCATTGCCACGT +
Preference number: 4 (lower is better)
Translates to: KPQGIHAGAGAGPATGLPACTLP*QVSLPR
Trigger: ACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGC...GGGCAGGCCAGTGGCAGGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAGCTGGGCTTGTACTCTaGCCTGCCAGGTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: KTADRASLEDQLSGQGRPAGLVL*PARSHC
Trigger: GCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGACCTGCAGCGCCGGTTaGTCACAGGGAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: MAQQSTGRPYRCRPTTSGTCSAG*SQGGSD
Trigger: ATCACTTCCTCCCTGTGACCAACCGGCGCTGCAGGT...CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGGCCGTCCCGCTTCTaGAACTTCTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: EPKTADRASLEDQLSGQGRPSRF*NFLQVC
Trigger: GCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCG...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGCTGCAGCCCCGGGGGTaGCAGTGTCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALLQPRG*QCLWLR
Trigger: CCTCAGCCACAGACACTGCCACCCCCGGGGCTGCAG...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTCATCTGTGGCTGGGGTaGCACTACGGTCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCHLWLG*HYGLRG
Trigger: CCCCCGCAGACCGTAGTGCCACCCCAGCCACAGATG...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR CCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTACATCTGTGGCTGGGGTaGCACTACGGTCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVHLWLG*HYGLRG
Trigger: CCCCCGCAGACCGTAGTGCCACCCCAGCCACAGATG...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR CCA 90 bp ATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGAGCATGGCACTGCTTTaGGTGGTGGGCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: MAQQSTGRPYRCRPTTSGSMALL*VVGTVL
Trigger: GAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCT...CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGGCCTGTGGCGCCCTCTaGGGCTGTGCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEACGAL*GCAVRL
Trigger: CAGCCGGACAGCACAGCCCCAGAGGGCGCCACAGGC...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTAGCCCTGCCTGTGGCGCCCTCTaGGGCTGTGCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PPGLAVPRCLCLAPSSSPACGAL*GCAVRL
Trigger: CAGCCGGACAGCACAGCCCCAGAGGGCGCCACAGGC...AGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CCACGGCCTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTCTAGAGGGTGGAGCCTaGCCTGTGGCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRPPGLAVPRCLCLAPSSLEGGA*PVAPSG
Trigger: CCCAGAGGGCGCCACAGGCCAGGCTCCACCCTCTAG...ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLPFTRG*SLACGA
Trigger: GGCGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGG...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTACTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVLTGPR*RTSSQG
Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSLTGPR*RTSSQG
Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATCCTCCATCAGCCTTGTaGCCAGGTCTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSPQGVHTAAGLPPLGPDPPSAL*PGLWLP
Trigger: AGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGG...ATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCCCTCCATCAGCCTTGTaGCCAGGTCTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLPPSAL*PGLWLP
Trigger: AGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGG...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLWPLLQ*SAGLAP
Trigger: TGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCA...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KTADRASLEDQLSGQGRPRGLVG*DCRRWA
Trigger: TGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCT...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: EPKTADRASLEDQLSGQGTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAGCACACACCTTCATGTaGAGGAGCCTAAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: KTADRASLEDQLSGQGRPAHTFM*RSLRPL
Trigger: CAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGC...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGCGGCCGTCCCGCTTCTaGAACTTCTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVRPSRF*NFLQVC
Trigger: GCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCG...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCGCTGTGCTGTCCGGCTaGGCCATAGCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPAVLSG*AIAGSG
Trigger: CCCTGAGCCGGCTATGGCCCAGCCGGACAGCACAGC...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CATACACACAGGAGACGAGACTGCTCTCCCGTGACCCCTAGTTATGCCCCACTGGCCTGTGGCGCCCTCTaGGGCTGTGCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HTHRRRDCSPVTPSYAPLACGAL*GCAVRL
Trigger: CAGCCGGACAGCACAGCCCCAGAGGGCGCCACAGGC...CAGTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTCGTCTCCTGTGTGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTGTGGAGCCTGGCCTGTaGCGCCCTCTGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCVEPGL*RPLGLC
Trigger: GCACAGCCCCAGAGGGCGCCACAGGCCAGGCTCCAC...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTTGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 4 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCGAGGACCAATGTaGCTGCCTATCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ADRASLEDQLSGQGRPSLGRGPM*LPIQAV
Trigger: CACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCC...TAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGGGCGAGGACCAATGTaGCTGCCTATCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVGRGPM*LPIQAV
Trigger: CACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCC...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTCCATCAGCCTTGTaGCCAGGTCTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLPPSAL*PGLWLP
Trigger: AGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGG...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGAGAGCAGGAGCCCCCTaGGTATCCCTAGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLRAGAP*VSLEQH
Trigger: ATGCTGCTCTAGGGATACTCAGGGGGCTCCTGCTCT...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGAGAGCAGGAGCCCCCTaGGTATCCCTAGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVRAGAP*VSLEQH
Trigger: ATGCTGCTCTAGGGATACTCAGGGGGCTCCTGCTCT...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTCATTCTCTCCACTCCTaGGGACCTCCACAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPHSLHS*GPPQLV
Trigger: CACTAGCTGTGGAGGTCCTCAGGAGTGGAGAGAATG...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: MAQQSTGRPYRCRPTTSGASGTS*RCAACL
Trigger: CAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGC...CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPGDGLF*SDPLVL
Trigger: CAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGCTCAGGGGTGGCAGCTaGCTTGGTGGCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSELRGGS*LGGQHG
Trigger: GCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAG...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGGCTGGGACACTGGGTaGTGGGCTTGTACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASGWDTG*WACTLP
Trigger: GGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGACCTGCAGCGCCGGTTaGTCACAGGGAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVTCSAG*SQGGSD
Trigger: ATCACTTCCTCCCTGTGACCAACCGGCGCTGCAGGT...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCCTGCAGCCCCGGGGGTaGCAGTGTCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFLQPRG*QCLWLR
Trigger: CCTCAGCCACAGACACTGCCACCCCCGGGGCTGCAG...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCTCTCCCATCAGTGGCTaGAGTAGCGCTCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: EPKTADRASLEDQLSGQGSPISG*SSAPVS
Trigger: ACTGACAGGAGCGCTACTCCAGCCACTGATGGGAGA...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGTGGCAGCTGCCTTGGTaGCCAGCATGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVWQLPW*PAWHCF
Trigger: AAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCA...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCGTGGAGCCTGGCCTGTaGCGCCCTCTGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PEIHSWEMASSAVIRWSCVEPGL*RPLGLC
Trigger: GCACAGCCCCAGAGGGCGCCACAGGCCAGGCTCCAC...GCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRPFTRG*SLACGA
Trigger: GGCGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCTGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 4 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTCTAGTTATGCCCCACTaGGATGTGGGGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCLVMPH*DVGAWG
Trigger: CCCCCATGCCCCCACATCCCAGTGGGGCATAACTAG...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTTGGGACACTGGGTGCTaGGCTTGTACTCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCWDTGC*ACTLPC
Trigger: GCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCACTTCCATCTGTGGCTaGGGTGGCACTACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EPKTADRASLEDQLSGQGTSICG*GGTTVF
Trigger: GAAGACCGTAGTGCCACCCCAGCCACAGATGGAAGT...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463537.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCATCTGTGGCTGGGGTaGCACTACGGTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASHLWLG*HYGLQP
Trigger: GGGCTGCAGACCGTAGTGCCACCCCAGCCACAGATG...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488336.5
3UTR CAA 72 bp AGGCCACGGCCTCCAGGACTTGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPRPPGLAVPRC*CLAPSSSPGPG
Trigger: TCCTGGACCAGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp CCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATGCTTCACCATCTTaGGGATGCCTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PSSPQGVHTAAGLPPLGPDASPS*GCLSRS
Trigger: AGAACGAGATAGGCATCCTCAAGATGGTGAAGCATC...TGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR TCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCCCTCCATCAGCCTTGTaGCCAGGTCTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTPPSAL*PGLWLP
Trigger: AGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGG...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGGCTGTGGTAGGGTCTaGCAAAGGGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASGCGRV*QRAPVR
Trigger: CCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGCAGCTTTCCGCACCTTaGGGCCGTCCCGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEQLSAP*GRPASG
Trigger: TCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTG...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ADRASLEDQLSGQGRPSLGDGLF*SDPLVL
Trigger: CAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC...TAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGCTGGACTGCTCTGGTaGCCGGAGCCGTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASAGLLW*PEPFHE
Trigger: CTCATGAAACGGCTCCGGGCACCAGAGCAGTCCAGC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTCTCAGGGGTGGCAGCTaGCTTGGTGGCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: EMASSAVIRWSCSTSISLLRGGS*LGGQHG
Trigger: GCCATGCTGGCCACCAAGGCAGCTGCCACCCCTGAG...AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGCCACAAGGAATCCATaGAGGGGCTGGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPATRNP*RGWGRP
Trigger: GGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCGGCTGGGACACTGGGTaGTGGGCTTGTACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPGWDTG*WACTLP
Trigger: GGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCC...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCGGGATGCTTCACCCTTaGGGCCGTCCCGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSWEMASSAVIRWSCSTSGMLHP*GRPASG
Trigger: TCCAGAAGCGGGACGGCCGCAAGGGTGAAGCATCCC...GGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCGGCCGTCCCGCTTCTaGAACTTCTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASRPSRF*NFLQVC
Trigger: GCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCG...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCGTGCTGGACTGCTCTaGTGCCCGGAGCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASRAGLL*CPEPFH
Trigger: ATGAAACGGCTCCGGGCACCAGAGCAGTCCAGCACG...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGGGGCTGCAGCCGTGCTaGACTGCTCTGGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: CGSEAPGPLIEVSCRKREGLQPC*TALVPG
Trigger: TCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCC...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGGTGGCTGAGGCCGACTaGGCTGCAGCCGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CGSEAPGPLIEVSCRKREVAEAD*AAAVLD
Trigger: GTCCAGCACGGCTGCAGCCCAGTCGGCCTCAGCCAC...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGTCTCCCATCAGTGGCTaGAGTAGCGCTCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLSPISG*SSAPVS
Trigger: ACTGACAGGAGCGCTACTCCAGCCACTGATGGGAGA...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGCAGTGCTCTCTTCTGTaGCTGGTGTGGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVQCSLL*LVWLSH
Trigger: ATGGGAGAGCCACACCAGCCACAGAAGAGAGCACTG...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCCTTGGTGGCCAGCATaGCACTGCTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRPWWPA*HCFGWW
Trigger: CCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCTAGAGGGTGGAGCCTaGCCTGTGGCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRLEGGA*PVAPSG
Trigger: CCCAGAGGGCGCCACAGGCCAGGCTCCACCCTCTAG...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCGGCTGCCTACTCAGCTaGCCTCCTCCCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTGCLLS*PPPFET
Trigger: AGTCTCAAAGGGAGGAGGCCAGCTGAGTAGGCAGCC...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCGGCAGTGTCTGTGGCTaGGGCCGACTGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPGSVCG*GRLGCS
Trigger: GCTGCAGCCCAGTCGGCCTCAGCCACAGACACTGCC...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCGGCTGTGGTAGGGTCTaGCAAAGGGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPGCGRV*QRAPVR
Trigger: CCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCC...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GTHLHVQEPKTADRASLECRCAA*LSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCA...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CATACACACAGGAGACGAGACTGCTCTCCCGTGACCCCTAGTTATGCCCCACTGCAGCTTTCCGCACCTTaGGGCCGTCCCGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HTHRRRDCSPVTPSYAPLQLSAP*GRPASG
Trigger: TCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTG...CAGTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTCGTCTCCTGTGTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TACATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: YMMTPMAQQSTGRPYRCRTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...CCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCATGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTVIRWS*STSISL
Trigger: AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGCAGCCGTGCTGGACTaGTCTGGTGCCCGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SIARNPLMGDGLFCSDPLAAVLD*SGARSR
Trigger: ACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGC...CAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGTGGCCAGCATGGCACTaGTTTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEWPAWH*FGWWAQ
Trigger: CTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCA...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGCACACACCTTCATGTaGAGGAGCCTAAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: GTHLHVQEPKTADRASLEAHTFM*RSLRPL
Trigger: CAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGC...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTAGGACCACCACGGAGTaGCGAGCAAGGGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCRTTTE*RARART
Trigger: GGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCT...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGAGGACCACCACGGAGTaGCGAGCAAGGGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRRTTTE*RARART
Trigger: GGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCT...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLEGRPYR*RPTTSG
Trigger: CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCC...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCACTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: KTADRASLEDQLSGQGRPLSSCP*PGRFHK
Trigger: TTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAG...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTAGCCCTCGGCCGTCCCGCTTCTaGAACTTCTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PPGLAVPRCLCLAPSSSPRPSRF*NFLQVC
Trigger: GCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCG...AGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAGGGCTGCAGCCGTGCTaGACTGCTCTGGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRGLQPC*TALVPG
Trigger: TCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCC...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCGGGTGGCAGTGTCTGTaGCTGAGGCCGACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AALPEIHSWEMASSAVIRGWQCL*LRPTGL
Trigger: CAGCCCAGTCGGCCTCAGCCACAGACACTGCCACCC...GCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCCTGCAGCCCCGGGGGTaGCAGTGTCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPLQPRG*QCLWLR
Trigger: CCTCAGCCACAGACACTGCCACCCCCGGGGCTGCAG...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGGCTTCCATCGGTGGCTaGGGTGACACTGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALASIGG*GDTAIS
Trigger: ACTGATGGCAGTGTCACCCCAGCCACCGATGGAAGC...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGGCTCCTGTCAGTGGCTaGGGTGACACTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRAPVSG*GDTPIS
Trigger: ACTGATGGGAGTGTCACCCCAGCCACTGACAGGAGC...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTTCTCCCATCAGTGGCTaGAGTAGCGCTCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSSPISG*SSAPVS
Trigger: ACTGACAGGAGCGCTACTCCAGCCACTGATGGGAGA...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCAGCATGGCACTGCTTTaGGTGGTGGGCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASSMALL*VVGTVL
Trigger: GAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGTGGCAGCTGCCTTGGTaGCCAGCATGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALWQLPW*PAWHCF
Trigger: AAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCA...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGTGGAGCCTGGCCTGTaGCGCCCTCTGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFVEPGL*RPLGLC
Trigger: GCACAGCCCCAGAGGGCGCCACAGGCCAGGCTCCAC...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGGCTGCCTACTCAGCTaGCCTCCTCCCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASGCLLS*PPPFET
Trigger: AGTCTCAAAGGGAGGAGGCCAGCTGAGTAGGCAGCC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGCTAGTTATGCCCCACTaGGATGTGGGGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSELVMPH*DVGAWG
Trigger: CCCCCATGCCCCCACATCCCAGTGGGGCATAACTAG...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCCCAAGTTTAGGGCCTaGGAGAGTGTGGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASPKFRA*ESVGPA
Trigger: TGCAGGTCCCACACTCTCCCAGGCCCTAAACTTGGG...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCLTGPR*RTSSQG
Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGTCAGCCCTCCCTGTTTaGCCCAGGGTAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSESALPV*PRVRTQ
Trigger: CTGGGTCCTTACCCTGGGCCAAACAGGGAGGGCTGA...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGATGCTTCACCATCTTaGGGATGCCTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPDASPS*GCLSRS
Trigger: AGAACGAGATAGGCATCCTCAAGATGGTGAAGCATC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCTGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPWPLLQ*SAGLAP
Trigger: TGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCA...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGTGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEWPLLQ*SAGLAP
Trigger: TGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCA...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCCGGAGCCGTTTCATaGGGGTGGTCACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPPGAVS*GWSLGQ
Trigger: CTGTCCGAGTGACCACCCTCATGAAACGGCTCCGGG...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASRGLVG*DCRRWA
Trigger: TGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAGGCTGTGGTAGGGTCTaGCAAAGGGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLGCGRV*QRAPVR
Trigger: CCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCC...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTGCCAGGCTCTAACCTaGAGCGCCGGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTCQALT*SAGWSQ
Trigger: CTGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCA...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TACATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YMMTPMAQQSTGRPYRCRTPKRH*QALTCS
Trigger: GCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGT...CCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CCACGGCCTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRPPGLAVPRCLCLAPSSCRCAA*LSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCA...ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp GCTGCCTTGGTGGCCAGCATGGCACTGCTTTGGGTGGTGGGCACAGTGCTCTCTGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: AALVASMALLWVVGTVLSASGTS*RCAACL
Trigger: CAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGC...AGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp CCACGGCCTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTCTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: PRPPGLAVPRCLCLAPSSLAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRLAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATAGCTTGAGATTCCTGTaGACGATCTTGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSPQGVHTAAGLPPLGPDSLRFL*TILSEC
Trigger: GCACTCACTCAAGATCGTGCACAGGAATCTCAAGCT...ATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGGGTCCCACACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: RPYRCRPTTSGARYSGVPHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...TGGGACCCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALVIRWS*STSISL
Trigger: AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRVIRWS*STSISL
Trigger: AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAGCTGGACTGCTCTGGTaGCCGGAGCCGTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLAGLLW*PEPFHE
Trigger: CTCATGAAACGGCTCCGGGCACCAGAGCAGTCCAGC...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGCAGCCGTGCTGGACTaGTCTGGTGCCCGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFAAVLD*SGARSR
Trigger: ACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGC...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTACAGGGCAGCCCACTaGAGGACTCGGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCYRAAH*RTRKGR
Trigger: CCTGCCTTTCCGAGTCCTGCAGTGGGCTGCCCTGTA...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGGCTGGGACACTGGGTaGTGGGCTTGTACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPGWDTG*WACTLP
Trigger: GGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGAGGACCACCACGGAGTaGCGAGCAAGGGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLERTTTE*RARART
Trigger: GGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCT...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQGRPYR*RPTTSG
Trigger: CCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCC...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCTGCCTATCTCGTTCTTaGCAGCTTTCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTCLSRS*QLSAPC
Trigger: GCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCA...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAGGGTGGCAGTGTCTGTaGCTGAGGCCGACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRGWQCL*LRPTGL
Trigger: CAGCCCAGTCGGCCTCAGCCACAGACACTGCCACCC...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCGCTCCTGTCAGTGGCTaGGGTGACACTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: HSWEMASSAVIRWSCSTSAPVSG*GDTPIS
Trigger: ACTGATGGGAGTGTCACCCCAGCCACTGACAGGAGC...GGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCCAGTGCTCTCTTCTGTaGCTGGTGTGGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLQCSLL*LVWLSH
Trigger: ATGGGAGAGCCACACCAGCCACAGAAGAGAGCACTG...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCTGGCACTGCTTTGGGTaGTGGGCACAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASWHCFG*WAQCSL
Trigger: AAGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCA...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TACATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGTGGCACTGCTTTGGGTaGTGGGCACAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: YMMTPMAQQSTGRPYRCRWHCFG*WAQCSL
Trigger: AAGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCA...CCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGAGCATGGCACTGCTTTaGGTGGTGGGCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSESMALL*VVGTVL
Trigger: GAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCT...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCCCTTGGTGGCCAGCATaGCACTGCTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTPWWPA*HCFGWW
Trigger: CCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGG...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGCTGTGCTGTCCGGCTaGGCCATAGCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFAVLSG*AIAGSG
Trigger: CCCTGAGCCGGCTATGGCCCAGCCGGACAGCACAGC...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGGGCCGGCCCTGCCACTaGCCTGCCCACCACTCACAC +
Preference number: 4 (lower is better)
Translates to: SLPQETGEFNPTSSSQKKGRPCH*PAHHSH
Trigger: GTGTGAGTGGTGGGCAGGCCAGTGGCAGGGCCGGCC...CTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTATGGGACACTGGGTGCTaGGCTTGTACTCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLWDTGC*ACTLPC
Trigger: GCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTGGGACACTGGGTGCTaGGCTTGTACTCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTWDTGC*ACTLPC
Trigger: GCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCTCAGCCCTCCCTGTTTaGCCCAGGGTAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFSALPV*PRVRTQ
Trigger: CTGGGTCCTTACCCTGGGCCAAACAGGGAGGGCTGA...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGCATCTGTGGCTGGGGTaGCACTACGGTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ALPEIHSWEMASSAVIRWHLWLG*HYGLQP
Trigger: GGGCTGCAGACCGTAGTGCCACCCCAGCCACAGATG...CCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp AGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGGATGCTTCACCATCTTaGGGATGCCTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RRAGPPRSAEQGRGPMWLDASPS*GCLSRS
Trigger: AGAACGAGATAGGCATCCTCAAGATGGTGAAGCATC...CAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCCCCGGAGCCGTTTCATaGGGGTGGTCACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPPGAVS*GWSLGQ
Trigger: CTGTCCGAGTGACCACCCTCATGAAACGGCTCCGGG...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCAGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRAETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CATACACACAGGAGACGAGACTGCTCTCCCGTGACCCCTAGTTATGCCCCACTGAGAGCAGGAGCCCCCTaGGTATCCCTAGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HTHRRRDCSPVTPSYAPLRAGAP*VSLEQH
Trigger: ATGCTGCTCTAGGGATACTCAGGGGGCTCCTGCTCT...CAGTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTCGTCTCCTGTGTGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCCATTCTCTCCACTCCTaGGGACCTCCACAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPHSLHS*GPPQLV
Trigger: CACTAGCTGTGGAGGTCCTCAGGAGTGGAGAGAATG...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCTCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPSLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTATTTCATTGTTGAACTaGGCAGAAAATCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVISLLN*AENLPL
Trigger: CAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAAT...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTGCCAGGCTCTAACCTaGAGCGCCGGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ALPEIHSWEMASSAVIRWCQALT*SAGWSQ
Trigger: CTGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCA...CCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSETPKRH*QALTCS
Trigger: GCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGT...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATTGTAGGATGTTGGGATaGTTCACCATCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SSPQGVHTAAGLPPLGPDCRMLG*FTILRM
Trigger: CATCCTCAAGATGGTGAAGCATCCCAACATCCTACA...ATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR GCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTTGTAGGATGTTGGGATaGTTCACCATCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPCRMLG*FTILRM
Trigger: CATCCTCAAGATGGTGAAGCATCCCAACATCCTACA...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: EMASSAVIRWSCSTSISLTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGGGTCCCAAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 4 (lower is better)
Translates to: RPYRCRPTTSGARYSGVPRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...TGGGACCCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCAGCTGGACTGCTCTGGTaGCCGGAGCCGTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRAAGLLW*PEPFHE
Trigger: CTCATGAAACGGCTCCGGGCACCAGAGCAGTCCAGC...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCAAGCTCCACTCGCAGCTaGAGCTGTGGCCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPSSTRS*SCGPTC
Trigger: GCAGGTGGGGCCACAGCTGCAGCTGCGAGTGGAGCT...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR GCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGAGCTCCACTCGCAGCTaGAGCTGTGGCCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVSSTRS*SCGPTC
Trigger: GCAGGTGGGGCCACAGCTGCAGCTGCGAGTGGAGCT...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR GCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGCACATTATCACTCTTTaGAGCACGAGCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVHIITL*STSSIT
Trigger: GGTGATGCTGCTCGTGCTGCAAAGAGTGATAATGTG...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR GCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCTGGCCAGCATGGCACTaGTTTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPWPAWH*FGWWAQ
Trigger: CTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCA...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCATGGCCAGCATGGCACTaGTTTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRAWPAWH*FGWWAQ
Trigger: CTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCA...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTCCCTTTGAGACTCCTGGGCATAACCAGCAGCCTCTTCCCCTTTACTAGAGGGTGGCCAGCATGGCACTaGTTTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPLRLLGITSSLFPFTRGWPAWH*FGWWAQ
Trigger: CTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCA...CCCTCTAGTAAAGGGGAAGAGGCTGCTGGTTATGCCCAGGAGTCTCAAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTAAAAATGGAAGCTTCTaGCCTCCTACTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVKNGSF*PPTHSL
Trigger: GAGAGAATGAGTAGGAGGGCAGAAGCTTCCATTTTT...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCGCTGGGCTTGTACTCTaGCCTGCCAGGTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTAGLVL*PARSHC
Trigger: GCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCTGCAGCGCCGGTTaGTCACAGGGAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLTCSAG*SQGGSD
Trigger: ATCACTTCCTCCCTGTGACCAACCGGCGCTGCAGGT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPVSHLR*LVIVLL
Trigger: AAGAAGAACTATAACCAGCCATCGGAGGTGACTGAC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCTGCCTATCTCGTTCTTaGCAGCTTTCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASCLSRS*QLSAPC
Trigger: GCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCA...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTCCCTTTGAGACTCCTGGGCATAACCAGCAGCCTCTTCCCCTTTACTAGAGGGCGTGCTGGACTGCTCTaGTGCCCGGAGCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPLRLLGITSSLFPFTRGRAGLL*CPEPFH
Trigger: ATGAAACGGCTCCGGGCACCAGAGCAGTCCAGCACG...CCCTCTAGTAAAGGGGAAGAGGCTGCTGGTTATGCCCAGGAGTCTCAAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCACGTGCTGGACTGCTCTaGTGCCCGGAGCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRARAGLL*CPEPFH
Trigger: ATGAAACGGCTCCGGGCACCAGAGCAGTCCAGCACG...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGGGTGGCAGTGTCTGTaGCTGAGGCCGACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVGWQCL*LRPTGL
Trigger: CAGCCCAGTCGGCCTCAGCCACAGACACTGCCACCC...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCCTGCAGCCCCGGGGGTaGCAGTGTCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVLQPRG*QCLWLR
Trigger: CCTCAGCCACAGACACTGCCACCCCCGGGGCTGCAG...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTGCTCCTGTCAGTGGCTaGGGTGACACTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCAPVSG*GDTPIS
Trigger: ACTGATGGGAGTGTCACCCCAGCCACTGACAGGAGC...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCCTTGGTGGCCAGCATaGCACTGCTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRPWWPA*HCFGWW
Trigger: CCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGG...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGAGTGGAGCCTGGCCTGTaGCGCCCTCTGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRVEPGL*RPLGLC
Trigger: GCACAGCCCCAGAGGGCGCCACAGGCCAGGCTCCAC...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCAGTGGAGCCTGGCCTGTaGCGCCCTCTGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAVEPGL*RPLGLC
Trigger: GCACAGCCCCAGAGGGCGCCACAGGCCAGGCTCCAC...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCCCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPPFTRG*SLACGA
Trigger: GGCGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGG...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGATGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVLTGPR*RTSSQG
Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGGTAAGGCTGGGACACTaGGTGCTGGGCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEVRLGH*VLGLYS
Trigger: AGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTAC...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGTCAGCCCTCCCTGTTTaGCCCAGGGTAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: CGSEAPGPLIEVSCRKRESALPV*PRVRTQ
Trigger: CTGGGTCCTTACCCTGGGCCAAACAGGGAGGGCTGA...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCCATCTGTGGCTGGGGTaGCACTACGGTCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPHLWLG*HYGLPL
Trigger: AAGTGGAAGACCGTAGTGCCACCCCAGCCACAGATG...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463537.5
CDS-3UTR CCA 90 bp GCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCCCAGCTGTAGGATGTTaGGATGCTTCACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ASSAVIRWSCSTSISLVTPAVGC*DASPLR
Trigger: CCGCAAGGGTGAAGCATCCCAACATCCTACAGCTGG...GGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCGATGCTTCACCATCTTaGGGATGCCTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTDASPS*GCLSRS
Trigger: AGAACGAGATAGGCATCCTCAAGATGGTGAAGCATC...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCAGGTCGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: FCSDPLVLLHLHQPCDQVVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...GACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp GAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: EMASSAVIRWSCSTSISLVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCAGGCAGTGTCTGTGGCTaGGGCCGACTGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAGSVCG*GRLGCS
Trigger: GCTGCAGCCCAGTCGGCCTCAGCCACAGACACTGCC...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTSLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFRGLVG*DCRRWA
Trigger: TGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCT...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTCTCCAAATCAGATTATaGGTTATTGCCATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVLQIRL*VIAMQQ
Trigger: TTGCTGCATGGCAATAACTCATAATCTGATTTGGAG...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGGGAGAAGGGCAGGACCACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGAAAGGTGGATTGCCTaGAAGCAGGATGTACATGAT +
Preference number: 4 (lower is better)
Translates to: REKGRTTTECRARARTNVERWIA*KQDVHD
Trigger: ATCATGTACATCCTGCTTTCAGGCAATCCACCTTTC...CACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGTGGTCCTGCCCTTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGTGCCAGGCTCTAACCTaGAGCGCCGGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLECQALT*SAGWSQ
Trigger: CTGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCA...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCCTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTLAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAAGCTTGAGATTCCTGTaGACGATCTTGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVSLRFL*TILSEC
Trigger: GCACTCACTCAAGATCGTGCACAGGAATCTCAAGCT...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CATACACACAGGAGACGAGACTGCTCTCCCGTGACCCCTAGTTATGCCCCACTGGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HTHRRRDCSPVTPSYAPLGDGLF*SDPLVL
Trigger: CAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC...CAGTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTCGTCTCCTGTGTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCAGGTCGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FCSDPLVLLHLHQPCDQVGDGLF*SDPLVL
Trigger: CAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC...GACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAGCTTGTACTCTGCCCTaGCAGGTCTCATTGCCACGT +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLACTLP*QVSLPR
Trigger: ACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGC...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGTATGAGTTATTGCCATaGAGCAAGCCCCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALYELLP*SKPPRV
Trigger: CACCCTAGGGGGCTTGCTGCATGGCAATAACTCATA...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAACTGAGCAGAAAATCTaGCCCTGTAAAGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVTEQKI*PCKGQT
Trigger: GGTTTGCCCTTTACAGGGGCAGATTTTCTGCTCAGT...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTACCTGCAGCGCCGGTTaGTCACAGGGAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCTCSAG*SQGGSD
Trigger: ATCACTTCCTCCCTGTGACCAACCGGCGCTGCAGGT...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCTCCTCATAGAAAGGTaGATTGCCCAGATACTCGGG +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRLLIER*IAQILG
Trigger: CCCGAGTATCTGGGCAATCCACCTTTCTATGAGGAG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296471.11
CDS-3UTR CCA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPKFFSI*AQTPSL
Trigger: CAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTT...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCAGGGCTGCAGCCGTGCTaGACTGCTCTGGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAGLQPC*TALVPG
Trigger: TCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCC...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTCAGTGCTCTCTTCTGTaGCTGGTGTGGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCQCSLL*LVWLSH
Trigger: ATGGGAGAGCCACACCAGCCACAGAAGAGAGCACTG...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCTAGTTATGCCCCACTaGGATGTGGGGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLLVMPH*DVGAWG
Trigger: CCCCCATGCCCCCACATCCCAGTGGGGCATAACTAG...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAGTAAGGCTGGGACACTaGGTGCTGGGCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLVRLGH*VLGLYS
Trigger: AGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTAC...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAGGGCGAGGACCAATGTaGCTGCCTATCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRGRGPM*LPIQAV
Trigger: CACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCC...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGATGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRWPLLQ*SAGLAP
Trigger: TGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCA...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGAGACTGCTCTCCCGTaGCCCCTAGTTATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVETALP*PLVMPH
Trigger: GTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTC...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTAGAGCAGGAGCCCCCTaGGTATCCCTAGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLRAGAP*VSLEQH
Trigger: ATGCTGCTCTAGGGATACTCAGGGGGCTCCTGCTCT...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGGGCTGTGGTAGGGTCTaGCAAAGGGCACCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQGCGRV*QRAPVR
Trigger: CCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCC...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCATGCCAGGCTCTAACCTaGAGCGCCGGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPCQALT*SAGWSQ
Trigger: CTGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCA...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPTPKRH*QALTCS
Trigger: GCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGT...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AALPEIHSWEMASSAVIRTPKRH*QALTCS
Trigger: GCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGT...GCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCCRCAA*LSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCA...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPCRCAA*LSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCA...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCASGTS*RCAACL
Trigger: CAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGC...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CATACACACAGGAGACGAGACTGCTCTCCCGTGACCCCTAGTTATGCCCCACTGGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HTHRRRDCSPVTPSYAPLASGTS*RCAACL
Trigger: CAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGC...CAGTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTCGTCTCCTGTGTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFASGTS*RCAACL
Trigger: CAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGC...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTTGTAGGATGTTGGGATaGTTCACCATCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCCRMLG*FTILRM
Trigger: CATCCTCAAGATGGTGAAGCATCCCAACATCCTACA...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCAGCTTGAGATTCCTGTaGACGATCTTGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASSLRFL*TILSEC
Trigger: GCACTCACTCAAGATCGTGCACAGGAATCTCAAGCT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCACATTATCACTCTTTaGAGCACGAGCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRHIITL*STSSIT
Trigger: GGTGATGCTGCTCGTGCTGCAAAGAGTGATAATGTG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR GCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGTACAGGGCAGCCCACTaGAGGACTCGGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQYRAAH*RTRKGR
Trigger: CCTGCCTTTCCGAGTCCTGCAGTGGGCTGCCCTGTA...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTGCTTGTACTCTGCCCTaGCAGGTCTCATTGCCACGT +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCACTLP*QVSLPR
Trigger: ACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGC...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACGTGCTGGACTGCTCTaGTGCCCGGAGCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPRAGLL*CPEPFH
Trigger: ATGAAACGGCTCCGGGCACCAGAGCAGTCCAGCACG...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGGCTTCCATCGGTGGCTaGGGTGACACTGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLEASIGG*GDTAIS
Trigger: ACTGATGGCAGTGTCACCCCAGCCACCGATGGAAGC...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTCCCTTTGAGACTCCTGGGCATAACCAGCAGCCTCTTCCCCTTTACTAGAGGGCAGTGCTCTCTTCTGTaGCTGGTGTGGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LPLRLLGITSSLFPFTRGQCSLL*LVWLSH
Trigger: ATGGGAGAGCCACACCAGCCACAGAAGAGAGCACTG...CCCTCTAGTAAAGGGGAAGAGGCTGCTGGTTATGCCCAGGAGTCTCAAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCTGGCACTGCTTTGGGTaGTGGGCACAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPWHCFG*WAQCSL
Trigger: AAGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCA...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGTGGCACTGCTTTGGGTaGTGGGCACAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CGSEAPGPLIEVSCRKREWHCFG*WAQCSL
Trigger: AAGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCA...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAGCATGGCACTGCTTTaGGTGGTGGGCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRSMALL*VVGTVL
Trigger: GAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCT...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCACTAGAGGGTGGAGCCTaGCCTGTGGCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPSLDLNILPYLSASSIPLEGGA*PVAPSG
Trigger: CCCAGAGGGCGCCACAGGCCAGGCTCCACCCTCTAG...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCCCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVPFTRG*SLACGA
Trigger: GGCGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGG...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CAA 72 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVS*PRPNCSSFPLE
Trigger: CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTCCTCCATCAGCCTTGTaGCCAGGTCTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFPPSAL*PGLWLP
Trigger: AGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGG...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCACAGACACCATCCTTaGTGTTCTTATCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRHRHHP*CSYQKQ
Trigger: CTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TACATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCACAGACACCATCCTTaGTGTTCTTATCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YMMTPMAQQSTGRPYRCRHRHHP*CSYQKQ
Trigger: CTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTG...CCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp GAAGTCACTGATGACAATCTTCGAGTTCTTCAGCCGGTTGTAGTAAACCAGGTTGGCAGTGTCTGTGGCTaGGGCCGACTGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EVTDDNLRVLQPVVVNQVGSVCG*GRLGCS
Trigger: GCTGCAGCCCAGTCGGCCTCAGCCACAGACACTGCC...AACCTGGTTTACTACAACCGGCTGAAGAACTCGAAGATTGTCATCAGTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGACATTCTCTCCACTCCTaGGGACCTCCACAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRHSLHS*GPPQLV
Trigger: CACTAGCTGTGGAGGTCCTCAGGAGTGGAGAGAATG...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTTCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLSLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGATTTCATTGTTGAACTaGGCAGAAAATCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GTHLHVQEPKTADRASLEISLLN*AENLPL
Trigger: CAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAAT...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAACTCAATGTGGCTCTaGGGCACCTGGGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRNSMWL*GTWASD
Trigger: ATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTT...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPTPKRH*QALTCS
Trigger: GCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGT...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SIARNPLMGDGLFCSDPLCRCAA*LSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCA...CAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp TACATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: YMMTPMAQQSTGRPYRCRHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...CCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 4 (lower is better)
Translates to: TTECRARARTNVAAYPGCRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 4 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCTGCCTTGGTGGCCAGCATGGCACTGCTTTGGGTGGTGGGCACAGTGCTCTCTAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 4 (lower is better)
Translates to: AALVASMALLWVVGTVLSRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...AGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGTGGCCAGCATGGCACTaGTTTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: HTALPFCILYTSLYLLLEWPAWH*FGWWAQ
Trigger: CTGTGCCCACCACCCAAAGCAGTGCCATGCTGGCCA...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACTGCCCTACCTTTCTaGATCCTCTATACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLTALPF*ILYTSL
Trigger: CAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTATATGAGTTATTGCCATaGAGCAAGCCCCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLYELLP*SKPPRV
Trigger: CACCCTAGGGGGCTTGCTGCATGGCAATAACTCATA...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCACGGCCTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRPPGLAVPRCLCLAPSSVSHLR*LVIVLL
Trigger: AAGAAGAACTATAACCAGCCATCGGAGGTGACTGAC...ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTGCCTATCTCGTTCTTaGCAGCTTTCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PEIHSWEMASSAVIRWSCCLSRS*QLSAPC
Trigger: GCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCA...GCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR CCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTTGCCTATCTCGTTCTTaGCAGCTTTCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCCLSRS*QLSAPC
Trigger: GCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCA...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGCTCCTGTCAGTGGCTaGGGTGACACTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVAPVSG*GDTPIS
Trigger: ACTGATGGGAGTGTCACCCCAGCCACTGACAGGAGC...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTTGGCACTGCTTTGGGTaGTGGGCACAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLWHCFG*WAQCSL
Trigger: AAGAGAGCACTGTGCCCACCACCCAAAGCAGTGCCA...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGTGGCAGCTGCCTTGGTaGCCAGCATGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQWQLPW*PAWHCF
Trigger: AAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCA...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCTGCCTACTCAGCTaGCCTCCTCCCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFGCLLS*PPPFET
Trigger: AGTCTCAAAGGGAGGAGGCCAGCTGAGTAGGCAGCC...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCTAGTTATGCCCCACTaGGATGTGGGGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLPQETGEFNPTSSSQKKLVMPH*DVGAWG
Trigger: CCCCCATGCCCCCACATCCCAGTGGGGCATAACTAG...CTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTCCCAAGTTTAGGGCCTaGGAGAGTGTGGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFPKFRA*ESVGPA
Trigger: TGCAGGTCCCACACTCTCCCAGGCCCTAAACTTGGG...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGGTGCACGATCTTGAGTaGGTGCAAATAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQVHDLE*VQIGHG
Trigger: GCCGTGGCCTATTTGCACTCACTCAAGATCGTGCAC...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCCTCCATCAGCCTTGTaGCCAGGTCTTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLPQETGEFNPTSSSQKKPPSAL*PGLWLP
Trigger: AGGCAGCCAAAGACCTGGTCACAAGGCTGATGGAGG...CTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp AGAAGCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATTGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSSIARNPLMGDGLFCSDWPLLQ*SAGLAP
Trigger: TGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCA...ATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGTGGCCTCTTCTGCAGTaGTCCGCTGGTCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTALPFCILYTSLYLLLEWPLLQ*SAGLAP
Trigger: TGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCA...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCATCCCTTAGAGGCTCATaGGGTTCAGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPSLRGS*GSGYRA
Trigger: TGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGA...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGATTTCATTGTTGAACTaGGCAGAAAATCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRISLLN*AENLPL
Trigger: CAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAAT...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCATTTCATTGTTGAACTaGGCAGAAAATCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLISLLN*AENLPL
Trigger: CAGGGGCAGATTTTCTGCTCAGTTCAACAATGAAAT...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCAAACTCAATGTGGCTCTaGGGCACCTGGGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPNSMWL*GTWASD
Trigger: ATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTT...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCGAAAGGTGGATTGCCTaGAAGCAGGATGTACATGAT +
Preference number: 4 (lower is better)
Translates to: HSWEMASSAVIRWSCSTSERWIA*KQDVHD
Trigger: ATCATGTACATCCTGCTTTCAGGCAATCCACCTTTC...GGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCGAAAGGTGGATTGCCTaGAAGCAGGATGTACATGAT +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPERWIA*KQDVHD
Trigger: ATCATGTACATCCTGCTTTCAGGCAATCCACCTTTC...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQLAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPLAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCCACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: RRWASRKSKEVSALPVWPHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFGDGLF*SDPLVL
Trigger: CAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCAGCACACACCTTCATGTaGAGGAGCCTAAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPAHTFM*RSLRPL
Trigger: CAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGC...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCTACAGGGCAGCCCACTaGAGGACTCGGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSYRAAH*RTRKGR
Trigger: CCTGCCTTTCCGAGTCCTGCAGTGGGCTGCCCTGTA...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGCCTGCCAGGTCTCATTaGCACGTCCTAATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: CGSEAPGPLIEVSCRKREPARSH*HVLIVP
Trigger: AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGG...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGTATGAGTTATTGCCATaGAGCAAGCCCCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRYELLP*SKPPRV
Trigger: CACCCTAGGGGGCTTGCTGCATGGCAATAACTCATA...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGCAGATTATGAGTTATTaGCATGCAGCAAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: CGGMGERGHHASDSMYSEQIMSY*HAASPL
Trigger: TAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCACTGAGCAGAAAATCTaGCCCTGTAAAGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTTEQKI*PCKGQT
Trigger: GGTTTGCCCTTTACAGGGGCAGATTTTCTGCTCAGT...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGAAGCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATACCTGCAGCGCCGGTTaGTCACAGGGAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RSSIARNPLMGDGLFCSDTCSAG*SQGGSD
Trigger: ATCACTTCCTCCCTGTGACCAACCGGCGCTGCAGGT...ATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp GCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASSAVIRWSCSTSISLVTVSHLR*LVIVLL
Trigger: AAGAAGAACTATAACCAGCCATCGGAGGTGACTGAC...GGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCCGGCCGTCCCGCTTCTaGAACTTCTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLRPSRF*NFLQVC
Trigger: GCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCG...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGGCTTCCATCGGTGGCTaGGGTGACACTGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: HTALPFCILYTSLYLLLEASIGG*GDTAIS
Trigger: ACTGATGGCAGTGTCACCCCAGCCACCGATGGAAGC...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTTCTCCCATCAGTGGCTaGAGTAGCGCTCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFSPISG*SSAPVS
Trigger: ACTGACAGGAGCGCTACTCCAGCCACTGATGGGAGA...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCCCTTGGTGGCCAGCATaGCACTGCTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLPWWPA*HCFGWW
Trigger: CCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGG...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCTGGCAGCTGCCTTGGTaGCCAGCATGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVWQLPW*PAWHCF
Trigger: AAAGCAGTGCCATGCTGGCCACCAAGGCAGCTGCCA...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCACCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: VPSLDLNILPYLSASSIPPFTRG*SLACGA
Trigger: GGCGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGG...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCATGGGATGTGGGGGCATaGGGGAGCGAGGGCATCATG +
Preference number: 4 (lower is better)
Translates to: VPSLDLNILPYLSASSIPWDVGA*GSEGIM
Trigger: CATGATGCCCTCGCTCCCCCATGCCCCCACATCCCA...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATGGGACACTGGGTGCTaGGCTTGTACTCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAWDTGC*ACTLPC
Trigger: GCAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCA...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCTCAGCCCTCCCTGTTTaGCCCAGGGTAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSSALPV*PRVRTQ
Trigger: CTGGGTCCTTACCCTGGGCCAAACAGGGAGGGCTGA...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTGATGCTTCACCATCTTaGGGATGCCTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPDASPS*GCLSRS
Trigger: AGAACGAGATAGGCATCCTCAAGATGGTGAAGCATC...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTCACAGACACCATCCTTaGTGTTCTTATCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCHRHHP*CSYQKQ
Trigger: CTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTG...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGCTCCAAATCAGATTATaGGTTATTGCCATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRLQIRL*VIAMQQ
Trigger: TTGCTGCATGGCAATAACTCATAATCTGATTTGGAG...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPQETGEFNPTSSSQKKTPKRH*QALTCS
Trigger: GCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGT...CTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HTALPFCILYTSLYLLLECRCAA*LSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCA...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVASGTS*RCAACL
Trigger: CAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGC...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCACGGCCTCCAGGACTTaGCGTACCACGTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLTASRT*RTTLLV
Trigger: CACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGT...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGCTTGAGATTCCTGTaGACGATCTTGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRASLRFL*TILSEC
Trigger: GCACTCACTCAAGATCGTGCACAGGAATCTCAAGCT...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCCACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATCTGGGCACAGACACCATCCTTGATGTTCTTATCAGAAGCAGCATTGCCAGAAGCTGGACTGCTCTGGTaGCCGGAGCCGTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: IWAQTPSLMFLSEAALPEAGLLW*PEPFHE
Trigger: CTCATGAAACGGCTCCGGGCACCAGAGCAGTCCAGC...TTCTGGCAATGCTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGCCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR GCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTCAGATTATGAGTTATTaGCATGCAGCAAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCQIMSY*HAASPL
Trigger: TAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCCAGATTATGAGTTATTaGCATGCAGCAAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFQIMSY*HAASPL
Trigger: TAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTCATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: GDGLFCSDPLVLLHLHQPHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCVSHLR*LVIVLL
Trigger: AAGAAGAACTATAACCAGCCATCGGAGGTGACTGAC...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCCTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPLSSCP*PGRFHK
Trigger: TTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAG...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGCTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: ALPEIHSWEMASSAVIRWLSSCP*PGRFHK
Trigger: TTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAG...CCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGAGCTTCCATCGGTGGCTaGGGTGACACTGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRASIGG*GDTAIS
Trigger: ACTGATGGCAGTGTCACCCCAGCCACCGATGGAAGC...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCGCTCCTGTCAGTGGCTaGGGTGACACTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSAPVSG*GDTPIS
Trigger: ACTGATGGGAGTGTCACCCCAGCCACTGACAGGAGC...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGAAGCATGGCACTGCTTTaGGTGGTGGGCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRSMALL*VVGTVL
Trigger: GAGCACTGTGCCCACCACCCAAAGCAGTGCCATGCT...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGAGGCTGCCTACTCAGCTaGCCTCCTCCCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRGCLLS*PPPFET
Trigger: AGTCTCAAAGGGAGGAGGCCAGCTGAGTAGGCAGCC...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCAAGAGGACTTGTGGGCTaGGATTGTAGGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSARGLVG*DCRRWA
Trigger: TGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCT...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGTCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRSSFHC*TEQKIC
Trigger: GCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGA...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGGCCATTTTCTAGCTTAGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCTGCCAGGCTCTAACCTaGAGCGCCGGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RPFSSLARWKSLMTIFEFCQALT*SAGWSQ
Trigger: CTGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCA...GAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCTAAGCTAGAAAATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCTGTAGGATGTTGGGATaGTTCACCATCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPCRMLG*FTILRM
Trigger: CATCCTCAAGATGGTGAAGCATCCCAACATCCTACA...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSVIRWS*STSISL
Trigger: AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACCTGCCAGGTCTCATTaGCACGTCCTAATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPPARSH*HVLIVP
Trigger: AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGG...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCTGCCAGGTCTCATTaGCACGTCCTAATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQPARSH*HVLIVP
Trigger: AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGG...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCTGGGCTTGTACTCTaGCCTGCCAGGTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: VPSLDLNILPYLSASSIPAGLVL*PARSHC
Trigger: GCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTCATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPVSHLR*LVIVLL
Trigger: AAGAAGAACTATAACCAGCCATCGGAGGTGACTGAC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTCATAGTCACCAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATACGGCCGTCCCGCTTCTaGAACTTCTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LIVTSQDLAEEILIMVLIRPSRF*NFLQVC
Trigger: GCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCG...TATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLKFFSI*AQTPSL
Trigger: CAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCCAGTGCTCTCTTCTGTaGCTGGTGTGGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLQCSLL*LVWLSH
Trigger: ATGGGAGAGCCACACCAGCCACAGAAGAGAGCACTG...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCGTAAGGCTGGGACACTaGGTGCTGGGCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSVRLGH*VLGLYS
Trigger: AGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTAC...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCCTACGGTCTTCCACTTaGCCCTGGCAAAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPLRSST*PWQSSF
Trigger: AAAAGAACTTTGCCAGGGCCAAGTGGAAGACCGTAG...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463537.5
CDS-3UTR TCA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCCCGGAGCCGTTTCATaGGGGTGGTCACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHPGAVS*GWSLGQ
Trigger: CTGTCCGAGTGACCACCCTCATGAAACGGCTCCGGG...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCGAAAGGTGGATTGCCTaGAAGCAGGATGTACATGAT +
Preference number: 4 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPERWIA*KQDVHD
Trigger: ATCATGTACATCCTGCTTTCAGGCAATCCACCTTTC...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCAGCTTTCCGCACCTTaGGGCCGTCCCGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHQLSAP*GRPASG
Trigger: TCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTG...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR GCA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCAAGCTTGAGATTCCTGTaGACGATCTTGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPSLRFL*TILSEC
Trigger: GCACTCACTCAAGATCGTGCACAGGAATCTCAAGCT...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCACCAGCCAGGATCTTaGGGAAGAGATTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLHQPGS*GRDSYH
Trigger: ATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 4 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCCTGCCAGGTCTCATTaGCACGTCCTAATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HTALPFCILYTSLYLLLEPARSH*HVLIVP
Trigger: AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGG...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp AGATACTCGGGGGTCCCACAGGGCTCCTTGATGAGGCCATTTTCTAGCTTAGCCCATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: RYSGVPQGSLMRPFSSLAHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...GGCTAAGCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGACCCCCGAGTATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CCA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTCTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFLSSCP*PGRFHK
Trigger: TTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAG...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCKFFSI*AQTPSL
Trigger: CAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTT...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGGCCATTTTCTAGCTTAGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCGGCTGCCTACTCAGCTaGCCTCCTCCCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: RPFSSLARWKSLMTIFEFGCLLS*PPPFET
Trigger: AGTCTCAAAGGGAGGAGGCCAGCTGAGTAGGCAGCC...GAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCTAAGCTAGAAAATGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCSSFHC*TEQKIC
Trigger: GCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGA...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CTCATAGTCACCAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATACTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LIVTSQDLAEEILIMVLILAVPR*LCLAPS
Trigger: ACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAG...TATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACTATGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCAGCTTGAGATTCCTGTaGACGATCTTGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVSLRFL*TILSEC
Trigger: GCACTCACTCAAGATCGTGCACAGGAATCTCAAGCT...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp AGGCCATTTTCTAGCTTAGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RPFSSLARWKSLMTIFEFVIRWS*STSISL
Trigger: AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...GAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCTAAGCTAGAAAATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp AGGCCATTTTCTAGCTTAGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCGGAGATGGCCTCTTCTaGAGTGATCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPFSSLARWKSLMTIFEFGDGLF*SDPLVL
Trigger: CAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC...GAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCTAAGCTAGAAAATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGAAAAATGGAAGCTTCTaGCCTCCTACTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLEKNGSF*PPTHSL
Trigger: GAGAGAATGAGTAGGAGGGCAGAAGCTTCCATTTTT...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCTATGAGTTATTGCCATaGAGCAAGCCCCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSYELLP*SKPPRV
Trigger: CACCCTAGGGGGCTTGCTGCATGGCAATAACTCATA...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp AGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SIARNPLMGDGLFCSDPLKFFSI*AQTPSL
Trigger: CAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTT...CAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCCTTGGTGGCCAGCATaGCACTGCTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHPWWPA*HCFGWW
Trigger: CCACCACCCAAAGCAGTGCCATGCTGGCCACCAAGG...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
3UTR CAA 72 bp TGTAAAGGGCAAACCTCCAAATCAGATTATGAGTTATaGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: CKGQTSKSDYEL*PCSKPPRVERT
Trigger: AGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTGATTTGGAGGTTTGCCCTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGAGGTCTTTGGCTGCCTaGGAAATATCATCCCAATAT +
Preference number: 4 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQRSLAA*EISSQY
Trigger: ATATTGGGATGATATTTCGCAGGCAGCCAAAGACCT...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGAAAAATGGAAGCTTCTaGCCTCCTACTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVKNGSF*PPTHSL
Trigger: GAGAGAATGAGTAGGAGGGCAGAAGCTTCCATTTTT...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGATTATGAGTTATTaGCATGCAGCAAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: HTALPFCILYTSLYLLLEQIMSY*HAASPL
Trigger: TAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCACTGAGCAGAAAATCTaGCCCTGTAAAGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSTEQKI*PCKGQT
Trigger: GGTTTGCCCTTTACAGGGGCAGATTTTCTGCTCAGT...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCACTGAGCAGAAAATCTaGCCCTGTAAAGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLTEQKI*PCKGQT
Trigger: GGTTTGCCCTTTACAGGGGCAGATTTTCTGCTCAGT...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCCACAGACACCATCCTTaGTGTTCTTATCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLHRHHP*CSYQKQ
Trigger: CTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTG...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGATCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRSSFHC*TEQKIC
Trigger: GCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGA...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATGTAGGATGTTGGGATaGTTCACCATCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSACRMLG*FTILRM
Trigger: CATCCTCAAGATGGTGAAGCATCCCAACATCCTACA...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHVIRWS*STSISL
Trigger: AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR GCA 90 bp CAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTTGTAGGATGTTGGGATaGTTCACCCTTGCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: QPGSCGRDSYHGSHNHLLCRMLG*FTLAAV
Trigger: GACGGCCGCAAGGGTGAAGCATCCCAACATCCTACA...AAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CCA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCAGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAVSHLR*LVIVLL
Trigger: AAGAAGAACTATAACCAGCCATCGGAGGTGACTGAC...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACTCTCCCATCAGTGGCTaGAGTAGCGCTCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHSPISG*SSAPVS
Trigger: ACTGACAGGAGCGCTACTCCAGCCACTGATGGGAGA...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR TCA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCACACAGACACCATCCTTaGTGTTCTTATCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VPSLDLNILPYLSASSIPHRHHP*CSYQKQ
Trigger: CTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTG...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCATAGAAAGGTGGATTaGCTGAAAGCAGGATGTACA +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSHRKVD*LKAGCT
Trigger: TGTACATCCTGCTTTCAGGCAATCCACCTTTCTATG...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSKFFSI*AQTPSL
Trigger: CAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTT...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTCCAAATCAGATTATaGGTTATTGCCATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSLQIRL*VIAMQQ
Trigger: TTGCTGCATGGCAATAACTCATAATCTGATTTGGAG...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CCA 90 bp CTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCTCCTCCTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LAEEILIMVLIIIFFHLLLSSCP*PGRFHK
Trigger: TTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAG...GAGGAGGTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR TCA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCTCTTCATTTCATTGTTaGACTGAGCAGAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: AKSGLKHTALPFCILYTSSSFHC*TEQKIC
Trigger: GCAGATTTTCTGCTCAGTTCAACAATGAAATGAAGA...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR TCA 90 bp CAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTGAAAGGTGGATTGCCTaGAAGCAGGATGTACATGAT +
Preference number: 4 (lower is better)
Translates to: QPGSCGRDSYHGSHNHLLERWIA*KQDVHD
Trigger: ATCATGTACATCCTGCTTTCAGGCAATCCACCTTTC...AAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS CCA 90 bp CCACCTGCAGCCCCGGGGGTGGCAGTGTCTGTGGCTGAGGCCGACTaGGCTGCAGCCGTGCTGGACTGCTCTGGTGCCCGGAGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: PPAAPGVAVSVAEAD*AAAVLDCSGARSRF
Trigger: GAAACGGCTCCGGGCACCAGAGCAGTCCAGCACGGCTGCAGCCCAGTCGGCCTCAGCCACAGACACTGCCACCCCCGGGGCTGCAGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296471.11
ENST00000467248.5
ENST00000475665.5
ENST00000477224.6
ENST00000620470.4
CDS-3UTR CAA 90 bp CCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGCAGCTTTCCGCACCTaGCGGCCGTCCCGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PSSPQGVHTAAGLPPLGPAAFRT*RPSRFW
Trigger: CCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGC...TGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS TCA 90 bp GAGCCTGGCGTGGGCAGAATCAGGGGTAGGGCAGGAGCACTTGGGTaGGCTGCCTACGCCAGGCAGCTGGCTGAGCAAGGCACAGGGACC +
Preference number: 5 (lower is better)
Translates to: EPGVGRIRGRAGALG*AAYARQLAEQGTGT
Trigger: GGTCCCTGTGCCTTGCTCAGCCAGCTGCCTGGCGTAGGCAGCTCACCCAAGTGCTCCTGCCCTACCCCTGATTCTGCCCACGCCAGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000483811.5
CDS-3UTR CAA 90 bp AAGCCACAAGGAATCCATGCAGGGGCTGGGGCCGGCCCTGCCACTGGCCTGCCCCAGCATGGCACTGCTTaGGGTGGTGGGCACAGTGCT +
Preference number: 5 (lower is better)
Translates to: KPQGIHAGAGAGPATGLPQHGTA*GGGHSA
Trigger: AGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTG...GGGCAGGCCAGTGGCAGGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCTGGGATGCTTCACCCTaGCGGCCGTCCCGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: VHRASIPLPAYHLWGQILWDASP*RPSRFW
Trigger: CCAGAAGCGGGACGGCCGCAAGGGTGAAGCATCCCA...GAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS GCA 90 bp ATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGGGTCGGGGGTCCCACAGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: MMTPMAQQSTGRPYR*RPTTSGVGGPTGLL
Trigger: AAGGAGCCCTGTGGGACCCCCGACCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480398.2
CDS GCA 90 bp CTGGCCTTAGCATCAGCTGCACTCCACTGCCACTTCCCTAGCCCCTaGTCACCAGCCCACCCAGCCTTGCCTGACAGGCCCGGCACTCAC +
Preference number: 5 (lower is better)
Translates to: LALASAALHCHFPSP*SPAHPALPDRPGTH
Trigger: GTGAGTGCCGGGCCTGTCAGGCAAGGCTGGGTGGGCTGGTGAGCAGGGGCTAGGGAAGTGGCAGTGGAGTGCAGCTGATGCTAAGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS CCA 90 bp GGGGTAGGGCAGGAGCACTTGGGTGAGCTGCCTACGCCAGGCAGCTaGCTGAGCAAGGCACAGGGACCTGGGACGCCAAGGGTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: GVGQEHLGELPTPGS*LSKAQGPGTPRVQK
Trigger: TTTCTGGACCCTTGGCGTCCCAGGTCCCTGTGCCTTGCTCAGCCAGCTGCCTGGCGTAGGCAGCTCACCCAAGTGCTCCTGCCCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000483811.5
CDS-3UTR CAA 90 bp AAGCCACAAGGAATCCATGCAGGGGCTGGGGCCGGCCCTGCCACTGGCCTGCCCACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: KPQGIHAGAGAGPATGLPTCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...GGGCAGGCCAGTGGCAGGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCACACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KTADRASLEDQLSGQGRPHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSGVAAA*VASMAL
Trigger: CAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCC...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCACCAGCTGTAGGATGTaGGGATGCTTCACCCTTGCG +
Preference number: 5 (lower is better)
Translates to: AQQSTGRPYRCRPTTSGATSCRM*GCFTLA
Trigger: CGCAAGGGTGAAGCATCCCAACATCCTACAGCTGGT...GGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CAA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASGVAAA*VASMAL
Trigger: CAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCCACACCCAAACGGCATaGCCAGGCTCTAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLHTQTA*PGSNLQ
Trigger: CTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTG...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGGGTCCCCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: ASIPLPAYHLWGQILGGPPVVLS*ARKISQ
Trigger: TTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGG...GGGACCCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGGCAGCTTTCCGCACCTaGCGGCCGTCCCGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CGGMGERGHHASDSMYSEAAFRT*RPSRFW
Trigger: CCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGC...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: VHRASIPLPAYHLWGQILTCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...GAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: PLTGPRWRTSSQGKAAQVVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...AACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: CGGMGERGHHASDSMYSEGVAAA*VASMAL
Trigger: CAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCC...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS GCA 90 bp CGCTGCCGGCCTACCACCTCTGGGGCTACAAACACAGCGCCCATCTaGTGGTCAGTATCAGGCCTAGCCAGGTCCAGTACCATCCACACC +
Preference number: 5 (lower is better)
Translates to: RCRPTTSGATNTAPI*WSVSGLARSSTIHT
Trigger: GGTGTGGATGGTACTGGACCTGGCTAGGCCTGATACTGACCAGCAGATGGGCGCTGTGTTTGTAGCCCCAGAGGTGGTAGGCCGGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000475665.5
CDS GCA 90 bp ATGATGACTCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGGGCTACAAACACAGCGCCCATCTGC +
Preference number: 5 (lower is better)
Translates to: MMTPMAQQSTGRPYR*RPTTSGATNTAPIC
Trigger: GCAGATGGGCGCTGTGTTTGTAGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGAGTCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475665.5
CDS-3UTR CAA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCACCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: KTADRASLEDQLSGQGRPPVVLS*ARKISQ
Trigger: TTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGG...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGGGTCCCAATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: RPYRCRPTTSGARYSGVPMPISF*AAFRTL
Trigger: CAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCAT...TGGGACCCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR CAA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGCACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GTHLHVQEPKTADRASLEHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TCCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTGCCGGCCTACCACCTCGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: SNGPAVHRASIPLPAYHLVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...GAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp AAGCCACAAGGAATCCATGCAGGGGCTGGGGCCGGCCCTGCCACTGGCCTGCCCACAGCCTTCTTCCACTaGGCCCTGGCAAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: KPQGIHAGAGAGPATGLPTAFFH*ALAKFF
Trigger: AAAGAACTTTGCCAGGGCCAAGTGGAAGAAGGCTGT...GGGCAGGCCAGTGGCAGGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAGCCACAAGGAATCCATGCAGGGGCTGGGGCCGGCCCTGCCACTGGCCTGCCCCCACATTATCACTCTTaGCAGCACGAGCAGCATCAC +
Preference number: 5 (lower is better)
Translates to: KPQGIHAGAGAGPATGLPPHYHS*QHEQHH
Trigger: GTGATGCTGCTCGTGCTGCAAAGAGTGATAATGTGG...GGGCAGGCCAGTGGCAGGGCCGGCCCCAGCCCCTGCATGGATTCCTTGTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR CAA 90 bp GAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: EMASSAVIRWSCSTSISLGVAAA*VASMAL
Trigger: CAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCC...AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS GCA 90 bp TGGCAGCTTTCCGCACCTTGCGGCCGTCCCGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTGGCCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: WQLSAPCGRPASGTS*RCAACLSSCPWPGR
Trigger: TCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CCA 90 bp TGCCGGCCTACCACCTCTGGGGCTACAAACACAGCGCCCATCTGCTaGTCAGTATCAGGCCTAGCCAGGTCCAGTACCATCCACACCAGC +
Preference number: 5 (lower is better)
Translates to: CRPTTSGATNTAPIC*SVSGLARSSTIHTS
Trigger: GCTGGTGTGGATGGTACTGGACCTGGCTAGGCCTGATACTGACCAGCAGATGGGCGCTGTGTTTGTAGCCCCAGAGGTGGTAGGCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000475665.5
CDS-3UTR CAA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTACACACCCAAACGGCATaGCCAGGCTCTAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVHTQTA*PGSNLQ
Trigger: CTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTG...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGGCAGCTTTCCGCACCTaGCGGCCGTCCCGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRAAFRT*RPSRFW
Trigger: CCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGC...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCACTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 5 (lower is better)
Translates to: KTADRASLEDQLSGQGRPLVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS GCA 90 bp GTTGGGATGCTTCACCCTTGCGGCCGTCCCGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTGGCCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: VGMLHPCGRPASGTS*RCAACLSSCPWPGR
Trigger: TCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGGTGAAGCATCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CAA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCCACACCCAAACGGCATaGCCAGGCTCTAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLHTQTA*PGSNLQ
Trigger: CTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTG...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: ADRASLEDQLSGQGRPSLMPISF*AAFRTL
Trigger: CAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCAT...TAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCGTCCATACCGCTGCCGGCCTACCACCTCTGGGGCCAGATACTCGGGGGTCCCAAGATAAAGTACTCCTaGCGGGTCACAAACACATCC +
Preference number: 5 (lower is better)
Translates to: ASIPLPAYHLWGQILGGPKIKYS*RVTNTS
Trigger: GGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTT...GGGACCCCCGAGTATCTGGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: TTECRARARTNVAAYPGCVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: GTHLHVQEPKTADRASLEVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTCTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 5 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPLVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRSDPLV*LHLHQP
Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACT...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCACAGCCTTCTTCCACTaGGCCCTGGCAAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: EPKTADRASLEDQLSGQGTAFFH*ALAKFF
Trigger: AAAGAACTTTGCCAGGGCCAAGTGGAAGAAGGCTGT...GCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGGTCTCCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: AEQGRGPMWLPIQAVVGSPCQVS*PRPNCS
Trigger: GGAACAATTAGGACGTGGCAATGAGACCTGGCAGGG...AGACCCTACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS GCA 90 bp GTGAGTGCAAATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGATCCAGT +
Preference number: 5 (lower is better)
Translates to: VSANRPRPPGLAVPR*LCLAPSSSPGPGSS
Trigger: ACTGGATCCTGGACCAGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATTTGCACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000477224.6
ENST00000479704.5
ENST00000480398.2
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS-3UTR CAA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATT +
Preference number: 5 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASSLPVV*SLARKI
Trigger: AATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCT...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALLQVCS*PVVLSL
Trigger: CAAGGACAAGACGACAGGCAAGCTGCACACCTGCAA...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAGACCGCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAAGATAAAGTACTCCTaGCGGGTCACAAACACATCC +
Preference number: 5 (lower is better)
Translates to: KTADRASLEDQLSGQGRPKIKYS*RVTNTS
Trigger: GGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTT...TGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGTGGGGGCATGGGGGAGCGAGGGCATCATGCCAGTGACTCTATGTACAGTGAGACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: CGGMGERGHHASDSMYSETCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...CTCACTGTACATAGAGTCACTGGCATGATGCCCTCGCTCCCCCATGCCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 5 (lower is better)
Translates to: TTECRARARTNVAAYPGCTRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTGCCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: LPIQAVVGSDKGHLSGASVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...GGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTCCAGGACTTGCCGTACCACGTTGCTTGTGTCTCGCTCCGAGTAGTAGCCCTGAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQDLPYHVACVSLRVVALSDPLV*LHLHQP
Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACT...CAGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CAA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGGGGGTGGCAGCTGCCTaGGTGGCCAGCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVGVAAA*VASMAL
Trigger: CAGTGCCATGCTGGCCACCAAGGCAGCTGCCACCCC...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CCTATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCCCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: PIQAVVGSDKGHLSGASLPCQVS*PRPNCS
Trigger: GGAACAATTAGGACGTGGCAATGAGACCTGGCAGGG...GAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTCACACCCAAACGGCATaGCCAGGCTCTAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: EMASSAVIRWSCSTSISLHTQTA*PGSNLQ
Trigger: CTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTG...AAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATT +
Preference number: 5 (lower is better)
Translates to: ASSAVIRWSCSTSISLVTSLPVV*SLARKI
Trigger: AATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCT...GGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: RRWASRKSKEVSALPVWPRFWNF*QVCSLP
Trigger: AGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCG...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRMPISF*AAFRTL
Trigger: CAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCAT...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTGGTAGGATGCTTCACCATCTaGAGGATGCCTATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: RSAEQGRGPMWLPIQAVVGCFTI*RMPISF
Trigger: GAACGAGATAGGCATCCTCAAGATGGTGAAGCATCC...TACCACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGCACACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGACCAGCTGTAGGATGTaGGGATGCTTCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: GTHLHVQEPKTADRASLETSCRM*GCFTIL
Trigger: CAAGATGGTGAAGCATCCCAACATCCTACAGCTGGT...CTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: GSDKGHLSGASLRKLGSLTCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...TAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTAGGGCCTGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RASLEDQLSGQGRPSLGPAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...AGGCCCTAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCAGCATGGCACTGCTTaGGGTGGTGGGCACAGTGCT +
Preference number: 5 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRQHGTA*GGGHSA
Trigger: AGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTG...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCTGACAGGGCCTCGCTGGAGGACCAGCTCTCAGGGCAAGGCCGCCCAAGTTTATCAGATTATGAGTTATaGCCATGCAGCAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: ADRASLEDQLSGQGRPSLSDYEL*PCSKPP
Trigger: AGGGGGCTTGCTGCATGGCAATAACTCATAATCTGA...TAAACTTGGGCGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS GCA 90 bp CCTTGCGGCCGTCCCGCTTCTGGAACTTCTTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGGCCCGGAAGATTTCACAAAACTCCT +
Preference number: 5 (lower is better)
Translates to: PCGRPASGTSCRCAA*LSSCPWPGRFHKTP
Trigger: AGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS-3UTR CAA 90 bp TACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: YQPVSAPRAAHTPQAHTFLQVCS*PVVLSL
Trigger: CAAGGACAAGACGACAGGCAAGCTGCACACCTGCAA...GAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CATACACACAGGAGACGAGACTGCTCTCCCGTGACCCCTAGTTATGCCCCACTGTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HTHRRRDCSPVTPSYAPLLQVCS*PVVLSL
Trigger: CAAGGACAAGACGACAGGCAAGCTGCACACCTGCAA...CAGTGGGGCATAACTAGGGGTCACGGGAGAGCAGTCTCGTCTCCTGTGTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGAGCAGCTTTCCGCACCTaGCGGCCGTCCCGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRAAFRT*RPSRFW
Trigger: CCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGC...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGGGATGCTTCACCATCTaGAGGATGCCTATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALGCFTI*RMPISF
Trigger: GAACGAGATAGGCATCCTCAAGATGGTGAAGCATCC...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGACACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCSDPLV*LHLHQP
Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACT...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: CGSEAPGPLIEVSCRKRESDPLV*LHLHQP
Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACT...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ATCCAGGCTGTGGTAGGGTCTGACAAAGGGCACCTGTCAGGAGCCTCCCTCAGGACAGCCTTCTTCCACTaGGCCCTGGCAAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: IQAVVGSDKGHLSGASLRTAFFH*ALAKFF
Trigger: AAAGAACTTTGCCAGGGCCAAGTGGAAGAAGGCTGT...CCTGAGGGAGGCTCCTGACAGGTGCCCTTTGTCAGACCCTACCACAGCCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296471.11
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCAGCATGGCACTGCTTaGGGTGGTGGGCACAGTGCT +
Preference number: 5 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLQHGTA*GGGHSA
Trigger: AGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTG...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGCAGCATGGCACTGCTTaGGGTGGTGGGCACAGTGCT +
Preference number: 5 (lower is better)
Translates to: SIARNPLMGDGLFCSDPLQHGTA*GGGHSA
Trigger: AGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTG...CAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CAA 90 bp CACACCTTCATGTGCAGGAGCCTAAGACCGCTGACAGGGCCTCGCTGGAGGACCTCAGATTATGAGTTATaGCCATGCAGCAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: HTFMCRSLRPLTGPRWRTSDYEL*PCSKPP
Trigger: AGGGGGCTTGCTGCATGGCAATAACTCATAATCTGA...GGTCCTCCAGCGAGGCCCTGTCAGCGGTCTTAGGCTCCTGCACATGAAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS TCA 90 bp GAAGGGTCACACAGAAAGGCCACAGACACATGCCCCCACCCCATCTaGCTGCAAGCCTGCTTGTCCATCTGTCCACTCACAGGATGTACA +
Preference number: 5 (lower is better)
Translates to: EGSHRKATDTCPHPI*LQACLSICPLTGCT
Trigger: TGTACATCCTGTGAGTGGACAGATGGACAAGCAGGCTTGCAGTCAGATGGGGTGGGGGCATGTGTCTGTGGCCTTTCTGTGTGACCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS GCA 90 bp GTGAGTGCAAATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGTAGTAGCCAGCTCCAGGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: VSANRPRPPGLAVPR*LCLAPSSSQLQEDK
Trigger: TTTATCTTCCTGGAGCTGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATTTGCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR CAA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATT +
Preference number: 5 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCSLPVV*SLARKI
Trigger: AATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCT...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATT +
Preference number: 5 (lower is better)
Translates to: PEIHSWEMASSAVIRWSCSLPVV*SLARKI
Trigger: AATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCT...GCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATT +
Preference number: 5 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPSLPVV*SLARKI
Trigger: AATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCT...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AALPEIHSWEMASSAVIRLQVCS*PVVLSL
Trigger: CAAGGACAAGACGACAGGCAAGCTGCACACCTGCAA...GCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: CGSEAPGPLIEVSCRKRERFWNF*QVCSLP
Trigger: AGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCG...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ACCACGGAGTGCCGAGCAAGGGCGAGGACCAATGTGGCTGCCTATCCAGGCTGTAAGATAAAGTACTCCTaGCGGGTCACAAACACATCC +
Preference number: 5 (lower is better)
Translates to: TTECRARARTNVAAYPGCKIKYS*RVTNTS
Trigger: GGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTT...ACAGCCTGGATAGGCAGCCACATTGGTCCTCGCCCTTGCTCGGCACTCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLEAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCAGGTCACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 5 (lower is better)
Translates to: FCSDPLVLLHLHQPCDQVTRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...GACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GCAGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: AALPEIHSWEMASSAVIRVPQGS*MRPFSS
Trigger: GCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGAC...GCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp AGCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: SIARNPLMGDGLFCSDPLSDPLV*LHLHQP
Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACT...CAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCACCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRAPCQVS*PRPNCS
Trigger: GGAACAATTAGGACGTGGCAATGAGACCTGGCAGGG...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCTTCATGTCCCTGCCAGGTCTCATaGCCACGTCCTAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: SLYLLLEQPTHHRHTPSCPCQVS*PRPNCS
Trigger: GGAACAATTAGGACGTGGCAATGAGACCTGGCAGGG...ACATGAAGGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS GCA 90 bp GGTCACACAGAAAGGCCACAGACACATGCCCCCACCCCATCTGACTaGAAGCCTGCTTGTCCATCTGTCCACTCACAGGATGTACATGAT +
Preference number: 5 (lower is better)
Translates to: GHTERPQTHAPTPSD*KPACPSVHSQDVHD
Trigger: ATCATGTACATCCTGTGAGTGGACAGATGGACAAGCAGGCTTGCAGTCAGATGGGGTGGGGGCATGTGTCTGTGGCCTTTCTGTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS GCA 90 bp CATCTTCTTCCACCTCCTCATAGAAAGGTGGATTGCCTGAAAGCCTaGATGGGGGAAGGGTCACACAGAAAGGCCACAGACACATGCCCC +
Preference number: 5 (lower is better)
Translates to: HLLPPPHRKVDCLKA*MGEGSHRKATDTCP
Trigger: GGGGCATGTGTCTGTGGCCTTTCTGTGTGACCCTTCCCCCATGCAGGCTTTCAGGCAATCCACCTTTCTATGAGGAGGTGGAAGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS CCA 90 bp TCTGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAAACTCCTCACTGCAGCCGACAGGCA +
Preference number: 5 (lower is better)
Translates to: SGTSCRCAACLSSCP*PGRFHKTPHCSRQA
Trigger: TGCCTGTCGGCTGCAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS-3UTR CAA 90 bp GGTAAGGACCCAGTAAGGCTGGGACACTGGGTGCTGGGCTTGTACTCTGCCCTGCAAAACTCCTCAGTCTaGATGACCTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: GKDPVRLGHWVLGLYSALQNSSV*MTCPKS
Trigger: TGATTTGGGACAGGTCATCAAGACTGAGGAGTTTTG...CAGGGCAGAGTACAAGCCCAGCACCCAGTGTCCCAGCCTTACTGGGTCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRPVVLS*ARKISQ
Trigger: TTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGG...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATT +
Preference number: 5 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLSLPVV*SLARKI
Trigger: AATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCT...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLERFWNF*QVCSLP
Trigger: AGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCG...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: CGSEAPGPLIEVSCRKREMPISF*AAFRTL
Trigger: CAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCAT...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTGGATGCTTCACCATCTaGAGGATGCCTATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCGCFTI*RMPISF
Trigger: GAACGAGATAGGCATCCTCAAGATGGTGAAGCATCC...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTTGTGACCAGGTCACCAGCTGTAGGATGTaGGGATGCTTCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: FCSDPLVLLHLHQPCDQVTSCRM*GCFTIL
Trigger: CAAGATGGTGAAGCATCCCAACATCCTACAGCTGGT...GACCTGGTCACAAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR CAA 90 bp AGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SLPQETGEFNPTSSSQKKHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...CTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCAACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 5 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRATRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGGTGCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTCCACATTATCACTCTTaGCAGCACGAGCAGCATCAC +
Preference number: 5 (lower is better)
Translates to: GCWACTLPCQVSLPRPNCPHYHS*QHEQHH
Trigger: GTGATGCTGCTCGTGCTGCAAAGAGTGATAATGTGG...ACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000477224.6
CDS-3UTR CAA 90 bp GGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTCAAAACTCCTCAGTCTaGATGACCTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: GDGLFCSDPLVLLHLHQPQNSSV*MTCPKS
Trigger: TGATTTGGGACAGGTCATCAAGACTGAGGAGTTTTG...AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGACCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRPVVLS*ARKISQ
Trigger: TTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGG...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCATTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPLQVCS*PVVLSL
Trigger: CAAGGACAAGACGACAGGCAAGCTGCACACCTGCAA...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGAGATGGCCTCTTCTGCAGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTAAGATAAAGTACTCCTaGCGGGTCACAAACACATCC +
Preference number: 5 (lower is better)
Translates to: GDGLFCSDPLVLLHLHQPKIKYS*RVTNTS
Trigger: GGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTT...AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACTGCAGAAGAGGCCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 5 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPTRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GGTGGAGAGGACTTGTGGGCTGAGATTGTAGGAGGTGGGCATCTAGGAAGAGCACTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 5 (lower is better)
Translates to: GGEDLWAEIVGGGHLGRALVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...TGCTCTTCCTAGATGCCCACCTCCTACAATCTCAGCCCACAAGTCCTCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTGGCCCGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RRWASRKSKEVSALPVWPAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...GGGCCAAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCACAGCATGGCACTGCTTaGGGTGGTGGGCACAGTGCT +
Preference number: 5 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAQHGTA*GGGHSA
Trigger: AGCACTGTGCCCACCACCCAAAGCAGTGCCATGCTG...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGACTACGGTCTTCCACTaGGCCCTGGCAAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: CILYTSLYLLLEQPTHHRTTVFH*ALAKFF
Trigger: AAAGAACTTTGCCAGGGCCAAGTGGAAGACCGTAGT...CCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463537.5
CDS CCA 90 bp TCTGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTaGCCCGGAAGATTTCACAAAACTCCTCACTCCGATGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: SGTSCRCAACLSSCP*PGRFHKTPHSDGWL
Trigger: TAACCAGCCATCGGAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467248.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCACACCCAAACGGCATaGCCAGGCTCTAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: AKSGLKHTALPFCILYTSHTQTA*PGSNLQ
Trigger: CTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTG...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp ATTGTAGGAGGTGGGCATCTAGGAAGAGCAAGGAGGTATCAGCCCTCCCTGTTTCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: IVGGGHLGRARRYQPSLFPVVLS*ARKISQ
Trigger: TTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGG...AAACAGGGAGGGCTGATACCTCCTTGCTCTTCCTAGATGCCCACCTCCTACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AAAGGGCACCTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTACCAGCTGTAGGATGTaGGGATGCTTCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: KGHLSGASLRKLGSLTLLTSCRM*GCFTIL
Trigger: CAAGATGGTGAAGCATCCCAACATCCTACAGCTGGT...AAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAGGTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGCGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: AKSGLKHTALPFCILYTSAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...GCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCAGAAAAAGCAACTCACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PQETGEFNPTSSSQKKQLTCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...GAGTTGCTTTTTCTGGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TTGCAGGGTGATGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAACCCACCGAAGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQGDVYLPGSVGTQLTHRSDPLV*LHLHQP
Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACT...TCGGTGGGTTAACTGTGTGCCTACTGAACCTGGCAAATAAACATCACCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGCACACACCGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LYQPVSAPRAAHTPQAHTAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...GGTGTGTGCCTGTGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCCAGGGTGATGTTTATTaGCCAGGTTCAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPQGDVY*PGSVGT
Trigger: TGTGCCTACTGAACCTGGCAAATAAACATCACCCTG...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp TGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGAAAGAGGGAGCAAAACTCCTCAGTCTaGATGACCTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: CGSEAPGPLIEVSCRKREQNSSV*MTCPKS
Trigger: TGATTTGGGACAGGTCATCAAGACTGAGGAGTTTTG...CTCCCTCTTTCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVPVVLS*ARKISQ
Trigger: TTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGG...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: HTALPFCILYTSLYLLLEMPISF*AAFRTL
Trigger: CAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCAT...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CAGATTATGAGTTATTGCCATGCAGCAAGCCCCCTAGGGTGGAGAGGACTTGTGACCAGCTGTAGGATGTaGGGATGCTTCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: QIMSYCHAASPLGWRGLVTSCRM*GCFTIL
Trigger: CAAGATGGTGAAGCATCCCAACATCCTACAGCTGGT...CACAAGTCCTCTCCACCCTAGGGGGCTTGCTGCATGGCAATAACTCATAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCTGGGCTTGTACTCTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTAAGATAAAGTACTCCTaGCGGGTCACAAACACATCC +
Preference number: 5 (lower is better)
Translates to: AGLVLCPARSHCHVLIVPKIKYS*RVTNTS
Trigger: GGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTT...AGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAGAGTACAAGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCTTCAGCCGGTTGTAGTAGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: SQMEVTDDNLRVLQPVVVAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...TACTACAACCGGCTGAAGAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CAA 90 bp AGGCCATTTTCTAGCTTAGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCCACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RPFSSLARWKSLMTIFEFHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...GAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCTAAGCTAGAAAATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 5 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVTRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GCATTGCCAGAAATCCACTCATGGGAGATGGCCTCTTCTGCAGTGATCCGCTGGGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: ALPEIHSWEMASSAVIRWAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...CCAGCGGATCACTGCAGAAGAGGCCATCTCCCATGAGTGGATTTCTGGCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CTGTCAGGAGCCTCCCTCAGGAAACTGGGGAGTTTAACCCTACTTCCTCATCCCGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LSGASLRKLGSLTLLPHPAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...GGGATGAGGAAGTAGGGTTAAACTCCCCAGTTTCCTGAGGGAGGCTCCTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCAACTCAATGTGGCTCTGAGGCACCTGGGCCTCTGATAGAAGTGAGCTGTAGATCAGATTATGAGTTATaGCCATGCAGCAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: ATQCGSEAPGPLIEVSCRSDYEL*PCSKPP
Trigger: AGGGGGCTTGCTGCATGGCAATAACTCATAATCTGA...TCTACAGCTCACTTCTATCAGAGGCCCAGGTGCCTCAGAGCCACATTGAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCCCCAGGGTGATGTTTATTaGCCAGGTTCAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: NCSSFPLEAHEVQGTGQPQGDVY*PGSVGT
Trigger: TGTGCCTACTGAACCTGGCAAATAAACATCACCCTG...GGGCTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS TCA 90 bp CTCATAATCATCTTCTTCCACCTCCTCATAGAAAGGTGGATTGCCTaGAAGCCTGCATGGGGGAAGGGTCACACAGAAAGGCCACAGACA +
Preference number: 5 (lower is better)
Translates to: LIIIFFHLLIERWIA*KPAWGKGHTERPQT
Trigger: TGTCTGTGGCCTTTCTGTGTGACCCTTCCCCCATGCAGGCTTTCAGGCAATCCACCTTTCTATGAGGAGGTGGAAGAAGATGATTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS GCA 90 bp GGTTCTCATAATCATCTTCTTCCACCTCCTCATAGAAAGGTGGATTaGCTGAAAGCCTGCATGGGGGAAGGGTCACACAGAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: GSHNHLLPPPHRKVD*LKACMGEGSHRKAT
Trigger: TGTGGCCTTTCTGTGTGACCCTTCCCCCATGCAGGCTTTCAGGCAATCCACCTTTCTATGAGGAGGTGGAAGAAGATGATTATGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS-3UTR CAA 90 bp CTGCCCTGCCAGGTCTCATTGCCACGTCCTAATTGTTCCTCCTTTCCCTTAGAGCAAAACTCCTCAGTCTaGATGACCTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: LPCQVSLPRPNCSSFPLEQNSSV*MTCPKS
Trigger: TGATTTGGGACAGGTCATCAAGACTGAGGAGTTTTG...CTCTAAGGGAAAGGAGGAACAATTAGGACGTGGCAATGAGACCTGGCAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGACCAGCTGTAGGATGTaGGGATGCTTCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: HTALPFCILYTSLYLLLETSCRM*GCFTIL
Trigger: CAAGATGGTGAAGCATCCCAACATCCTACAGCTGGT...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CTCATAGTCACCAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAACTTGCCGTACCACGTaGCTTGTGTCTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LIVTSQDLAEEILIMVLITCRTT*LVSRSE
Trigger: CTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGT...TATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACTATGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CCTTGTGACCAGGTCTTTGGCTGCCTGCGAAATATCATCCCAATATGGAGAGTCCTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 5 (lower is better)
Translates to: PCDQVFGCLRNIIPIWRVLVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...GACTCTCCATATTGGGATGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp TTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGCCCACACACCACAGGGTGATGTTTATTaGCCAGGTTCAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: FLHPLYQPVSAPRAAHTPQGDVY*PGSVGT
Trigger: TGTGCCTACTGAACCTGGCAAATAAACATCACCCTG...TGGTGTGTGGGCTGCTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS CCA 90 bp GGCACTACGGTCTTCCACTTGGCCCTGGCAAAGTTCTTTTCAATCTaGGCACAGACACCATCCTTGATGTTCTTATCAGAAGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: GTTVFHLALAKFFSI*AQTPSLMFLSEAAL
Trigger: CAATGCTGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGCCCAGATTGAAAAGAACTTTGCCAGGGCCAAGTGGAAGACCGTAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463537.5
CDS CCA 90 bp CGTCTTGATGACCTGTCCCAAATCATATCTGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTTGTCGCCCAGAGTCACACACCCAAA +
Preference number: 5 (lower is better)
Translates to: RLDDLSQIISVSHLR*LVIVLLVAQSHTPK
Trigger: TTTGGGTGTGTGACTCTGGGCGACAAGAAGAACTATAACCAGCCATCGGAGGTGACTGACAGATATGATTTGGGACAGGTCATCAAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476105.1
ENST00000498324.5
CDS-3UTR CAA 90 bp CCTAATTGTTCCTCCTTTCCCTTAGAGGCTCATGAGGTTCAGGGTACAGGGCAGCAAAACTCCTCAGTCTaGATGACCTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: PNCSSFPLEAHEVQGTGQQNSSV*MTCPKS
Trigger: TGATTTGGGACAGGTCATCAAGACTGAGGAGTTTTG...CTGCCCTGTACCCTGAACCTCATGAGCCTCTAAGGGAAAGGAGGAACAATTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGGCCATTTTCTAGCTTAGCCAGATGGAAGTCACTGATGACAATCTTCGAGTTCCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: RPFSSLARWKSLMTIFEFRFWNF*QVCSLP
Trigger: AGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCG...GAACTCGAAGATTGTCATCAGTGACTTCCATCTGGCTAAGCTAGAAAATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCACGGCCTCCAGGACTaGCCGTACCACGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHHGLQD*PYHVAC
Trigger: ACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTG...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAACCAGGTTCTCCAGCTaGAGATTCCTGTGCACGATC +
Preference number: 5 (lower is better)
Translates to: VPSLDLNILPYLSASSIPTRFSS*RFLCTI
Trigger: GATCGTGCACAGGAATCTCAAGCTGGAGAACCTGGT...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CATACTGCCCTACCTTTCTGCATCCTCTATACCAGCCTGTATCTGCTCCTAGAGCAGGGTGATGTTTATTaGCCAGGTTCAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: HTALPFCILYTSLYLLLEQGDVY*PGSVGT
Trigger: TGTGCCTACTGAACCTGGCAAATAAACATCACCCTG...CTCTAGGAGCAGATACAGGCTGGTATAGAGGATGCAGAAAGGTAGGGCAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS CCA 90 bp AGTCTTGATGACCTGTCCCAAATCATATCTGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTTGTCGCCCAGAGTCACACACCCAAA +
Preference number: 5 (lower is better)
Translates to: SLDDLSQIISVSHLR*LVIVLLVAQSHTPK
Trigger: TTTGGGTGTGTGACTCTGGGCGACAAGAAGAACTATAACCAGCCATCGGAGGTGACTGACAGATATGATTTGGGACAGGTCATCAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000472895.5
ENST00000475665.5
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000620470.4
CDS-3UTR CAA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCAGGATGCTTCACCATCTaGAGGATGCCTATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: VPSLDLNILPYLSASSIPGCFTI*RMPISF
Trigger: GAACGAGATAGGCATCCTCAAGATGGTGAAGCATCC...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp CAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: QPGSCGRDSYHGSHNHLLAVPRC*CLAPSS
Trigger: ACTACTCGGAGCGAGACACAAGCAACGTGGTACGGC...AAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCATCCTCTATACCACTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 5 (lower is better)
Translates to: VPSLDLNILPYLSASSIPLVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...TGGTATAGAGGATGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp GCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCTCCTCATATTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AEEILIMVLIIIFFHLLILQVCS*PVVLSL
Trigger: CAAGGACAAGACGACAGGCAAGCTGCACACCTGCAA...TATGAGGAGGTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp CAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: QPGSCGRDSYHGSHNHLLRFWNF*QVCSLP
Trigger: AGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCG...AAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp ATCCCTAGCCATGTGCCAAGTCTGGACTTAAACATACTGCCCTACCTTTCTGCAAAGATAAAGTACTCCTaGCGGGTCACAAACACATCC +
Preference number: 5 (lower is better)
Translates to: IPSHVPSLDLNILPYLSAKIKYS*RVTNTS
Trigger: GGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTT...TGCAGAAAGGTAGGGCAGTATGTTTAAGTCCAGACTTGGCACATGGCTAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000477224.6
ENST00000488336.5
CDS-3UTR CAA 90 bp AGTCACCAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATACAGCCTTCTTCCACTaGGCCCTGGCAAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SHQPGSCGRDSYHGSHNHTAFFH*ALAKFF
Trigger: AAAGAACTTTGCCAGGGCCAAGTGGAAGAAGGCTGT...ATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS-3UTR CAA 90 bp CAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACGGATGCTTCACCATCTaGAGGATGCCTATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: QDLAEEILIMVLIIIFFHGCFTI*RMPISF
Trigger: GAACGAGATAGGCATCCTCAAGATGGTGAAGCATCC...GTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS-3UTR CAA 90 bp CAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCTTGTGACCAGGTCTTaGGCTGCCTGCGAAATATCA +
Preference number: 5 (lower is better)
Translates to: QPGSCGRDSYHGSHNHLLLVTRS*AACEIS
Trigger: TGATATTTCGCAGGCAGCCAAAGACCTGGTCACAAG...AAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp AGTCACCAGCCAGGATCTTGCGGAAGAGATTCTTATCATGGTTCTCATAATCATCAAAACTCCTCAGTCTaGATGACCTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: SHQPGSCGRDSYHGSHNHQNSSV*MTCPKS
Trigger: TGATTTGGGACAGGTCATCAAGACTGAGGAGTTTTG...ATGATTATGAGAACCATGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS-3UTR CAA 90 bp GCGGAAGAGATTCTTATCATGGTTCTCATAATCATCTTCTTCCACCTCCTCATAGCACAGACACCATCCTaGATGTTCTTATCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: AEEILIMVLIIIFFHLLIAQTPS*MFLSEA
Trigger: TGCTTCTGATAAGAACATCAAGGATGGTGTCTGTGC...TATGAGGAGGTGGAAGAAGATGATTATGAGAACCATGATAAGAATCTCTTCCGC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466535.5
ENST00000487726.5
CDS GCA 72 bp CCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGGGTCGGGGGTCCCACA +
Preference number: 6 (lower is better)
Translates to: PMAQQSTGRPYR*RPTTSGVGGPT
Trigger: TGTGGGACCCCCGACCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480398.2
CDS CAA 90 bp CCCCTGAGCCTGGCGTGGGCAGAATCAGGGGTAGGGCAGGAGCACTaGGGTGAGCTGCCTACGCCAGGCAGCTGGCTGAGCAAGGCACAG +
Preference number: 6 (lower is better)
Translates to: PLSLAWAESGVGQEH*GELPTPGSWLSKAQ
Trigger: CTGTGCCTTGCTCAGCCAGCTGCCTGGCGTAGGCAGCTCACCCAAGTGCTCCTGCCCTACCCCTGATTCTGCCCACGCCAGGCTCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000483811.5
CDS GCA 72 bp GCATCAGCTGCACTCCACTGCCACTTCCCTAGCCCCTaGTCACCAGCCCACCCAGCCTTGCCTGACAGGCCC +
Preference number: 6 (lower is better)
Translates to: ASAALHCHFPSP*SPAHPALPDRP
Trigger: GGGCCTGTCAGGCAAGGCTGGGTGGGCTGGTGAGCAGGGGCTAGGGAAGTGGCAGTGGAGTGCAGCTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS CCA 72 bp CAGGAGCACTTGGGTGAGCTGCCTACGCCAGGCAGCTaGCTGAGCAAGGCACAGGGACCTGGGACGCCAAGG +
Preference number: 6 (lower is better)
Translates to: QEHLGELPTPGS*LSKAQGPGTPR
Trigger: CCTTGGCGTCCCAGGTCCCTGTGCCTTGCTCAGCCAGCTGCCTGGCGTAGGCAGCTCACCCAAGTGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000483811.5
CDS CAA 72 bp CTGGCGTGGGCAGAATCAGGGGTAGGGCAGGAGCACTaGGGTGAGCTGCCTACGCCAGGCAGCTGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LAWAESGVGQEH*GELPTPGSWLS
Trigger: GCTCAGCCAGCTGCCTGGCGTAGGCAGCTCACCCAAGTGCTCCTGCCCTACCCCTGATTCTGCCCACGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000483811.5
CDS GCA 72 bp CCAATGGCCCAGCAGTCCACAGGGCGTCCATACCGCTaGCGGCCTACCACCTCTGGGGCTACAAACACAGCG +
Preference number: 6 (lower is better)
Translates to: PMAQQSTGRPYR*RPTTSGATNTA
Trigger: CGCTGTGTTTGTAGCCCCAGAGGTGGTAGGCCGGCAGCGGTATGGACGCCCTGTGGACTGCTGGGCCATTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000475665.5
CDS CAA 90 bp TTGGCAGCTTTCCGCACCTTGCGGCCGTCCCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTGGCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: LAAFRTLRPSRFWNF*QVCSLPVVLSLARK
Trigger: CTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS GCA 72 bp TCCGCACCTTGCGGCCGTCCCGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: SAPCGRPASGTS*RCAACLSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp TGGCACTACGGTCTGCGGGGGCCACATTATCACTCTTaGCAGCACGAGCAGCATCACCCTCAGGGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: WHYGLRGPHYHS*QHEQHHPQGLR
Trigger: CCTCAGCCCCTGAGGGTGATGCTGCTCGTGCTGCAAAGAGTGATAATGTGGCCCCCGCAGACCGTAGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296471.11
ENST00000467248.5
ENST00000475665.5
ENST00000477224.6
ENST00000620470.4
CDS CAA 72 bp AGGCCACGGCCTCCAGGACTTGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGTAGCCAGCTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RPRPPGLAVPRC*CLAPSSSQLQE
Trigger: TTCCTGGAGCTGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS CAA 90 bp GCTGCAGAGGGTGGGACAGGTGAAAGCCCTGGGCGCTGGGGAATCTaGGGTCCCCAGACCCACACTCACAGCTCCAGGAAGATAAAGTAC +
Preference number: 6 (lower is better)
Translates to: AAEGGTGESPGRWGI*GPQTHTHSSRKIKY
Trigger: GTACTTTATCTTCCTGGAGCTGTGAGTGTGGGTCTGGGGACCCAAGATTCCCCAGCGCCCAGGGCTTTCACCTGTCCCACCCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000483811.5
CDS CAA 90 bp TGTTGGGATGCTTCACCCTTGCGGCCGTCCCGCTTCTGGAACTTCTaGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTGGCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: CWDASPLRPSRFWNF*QVCSLPVVLSLARK
Trigger: CTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGGTGAAGCATCCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS GCA 72 bp CTTCTTGTCGCCCAGAGTCACACACCCAAACGGCATTaGCAGGCTCTAACCTGCAGCGCCGGTTGGTCACAG +
Preference number: 6 (lower is better)
Translates to: LLVAQSHTPKRH*QALTCSAGWSQ
Trigger: CTGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTGTGACTCTGGGCGACAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000479704.5
ENST00000480398.2
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
CDS GCA 72 bp AATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTTaGTTGTGTCTCGCTCCGAGTAGTAGCCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: NRPRPPGLAVPR*LCLAPSSSQLQ
Trigger: CTGGAGCTGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS GCA 72 bp CCTACCACCTCTGGGGCTACAAACACAGCGCCCATCTaGTGGTCAGTATCAGGCCTAGCCAGGTCCAGTACC +
Preference number: 6 (lower is better)
Translates to: PTTSGATNTAPI*WSVSGLARSST
Trigger: GGTACTGGACCTGGCTAGGCCTGATACTGACCAGCAGATGGGCGCTGTGTTTGTAGCCCCAGAGGTGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000475665.5
CDS GCA 72 bp CTTCACCCTTGCGGCCGTCCCGCTTCTGGAACTTCTTaGAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: LHPCGRPASGTS*RCAACLSSCPW
Trigger: CCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS CAA 90 bp TCACCAGCCCACCCAGCCTTGCCTGACAGGCCCGGCACTCACGTCTaGATGACCTGTCCCAAATCATATCTGTCAGTCACCTCCGATGGC +
Preference number: 6 (lower is better)
Translates to: SPAHPALPDRPGTHV*MTCPKSYLSVTSDG
Trigger: GCCATCGGAGGTGACTGACAGATATGATTTGGGACAGGTCATCAAGACGTGAGTGCCGGGCCTGTCAGGCAAGGCTGGGTGGGCTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS CAA 90 bp AGTGCAAATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGATCCAGTCAA +
Preference number: 6 (lower is better)
Translates to: SANRPRPPGLAVPRC*CLAPSSSPGPGSSQ
Trigger: TTGACTGGATCCTGGACCAGGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATTTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000477224.6
ENST00000479704.5
ENST00000480398.2
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 90 bp CCCTTGCGGCCGTCCCGCTTCTGGAACTTCTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTGGCCCGGAAGATTTCACAAAACTCC +
Preference number: 6 (lower is better)
Translates to: PLRPSRFWNFLQVCS*PVVLSLARKISQNS
Trigger: GGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487726.5
CDS GCA 72 bp GGATGCCTATCTCGTTCTTGGCAGCTTTCCGCACCTTaGGGCCGTCCCGCTTCTGGAACTTCTTGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: GCLSRSWQLSAP*GRPASGTSCRC
Trigger: ACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CCA 72 bp ACCACCTCTGGGGCTACAAACACAGCGCCCATCTGCTaGTCAGTATCAGGCCTAGCCAGGTCCAGTACCATC +
Preference number: 6 (lower is better)
Translates to: TTSGATNTAPIC*SVSGLARSSTI
Trigger: GATGGTACTGGACCTGGCTAGGCCTGATACTGACCAGCAGATGGGCGCTGTGTTTGTAGCCCCAGAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472895.5
ENST00000475665.5
CDS CAA 72 bp TCTTCTTGTCGCCCAGAGTCACACACCCAAACGGCATaGCCAGGCTCTAACCTGCAGCGCCGGTTGGTCACA +
Preference number: 6 (lower is better)
Translates to: SSCRPESHTQTA*PGSNLQRRLVT
Trigger: TGTGACCAACCGGCGCTGCAGGTTAGAGCCTGGCAATGCCGTTTGGGTGTGTGACTCTGGGCGACAAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000479704.5
ENST00000480398.2
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
CDS CAA 72 bp AGGATGCCTATCTCGTTCTTGGCAGCTTTCCGCACCTaGCGGCCGTCCCGCTTCTGGAACTTCTTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RMPISFLAAFRT*RPSRFWNFLQV
Trigger: CACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp GGATGCTTCACCATCTTGAGGATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTGCGGCCGTCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: GCFTILRMPISF*AAFRTLRPSRF
Trigger: GAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCATCCTCAAGATGGTGAAGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 90 bp ACCTTGCGGCCGTCCCGCTTCTGGAACTTCTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTGGCCCGGAAGATTTCACAAAACTCC +
Preference number: 6 (lower is better)
Translates to: TLRPSRFWNFLQVCS*PVVLSLARKISQNS
Trigger: GGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 90 bp ACCATCTTGAGGATGCCTATCTCGTTCTTGGCAGCTTTCCGCACCTaGCGGCCGTCCCGCTTCTGGAACTTCTTGCAGGTGTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: TILRMPISFLAAFRT*RPSRFWNFLQVCSL
Trigger: CAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCATCCTCAAGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS GCA 72 bp CGTCCCGCTTCTGGAACTTCTTGCAGGTGTGCAGCTTaGCTGTCGTCTTGTCCTTGGCCCGGAAGATTTCAC +
Preference number: 6 (lower is better)
Translates to: RPASGTSCRCAA*LSSCPWPGRFH
Trigger: GTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp CCGTCCCGCTTCTGGAACTTCTTGCAGGTGTGCAGCTaGCCTGTCGTCTTGTCCTTGGCCCGGAAGATTTCA +
Preference number: 6 (lower is better)
Translates to: PSRFWNFLQVCS*PVVLSLARKIS
Trigger: TGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAAGCGGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp CACCCAGCCTTGCCTGACAGGCCCGGCACTCACGTCTaGATGACCTGTCCCAAATCATATCTGTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: HPALPDRPGTHV*MTCPKSYLSVT
Trigger: GGTGACTGACAGATATGATTTGGGACAGGTCATCAAGACGTGAGTGCCGGGCCTGTCAGGCAAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS CAA 90 bp AGGATGTTGGGATGCTTCACCATCTTGAGGATGCCTATCTCGTTCTaGGCAGCTTTCCGCACCTTGCGGCCGTCCCGCTTCTGGAACTTC +
Preference number: 6 (lower is better)
Translates to: RMLGCFTILRMPISF*AAFRTLRPSRFWNF
Trigger: GAAGTTCCAGAAGCGGGACGGCCGCAAGGTGCGGAAAGCTGCCAAGAACGAGATAGGCATCCTCAAGATGGTGAAGCATCCCAACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS GCA 72 bp CCACCTCCTCATAGAAAGGTGGATTGCCTGAAAGCCTaGATGGGGGAAGGGTCACACAGAAAGGCCACAGAC +
Preference number: 6 (lower is better)
Translates to: PPPHRKVDCLKA*MGEGSHRKATD
Trigger: GTCTGTGGCCTTTCTGTGTGACCCTTCCCCCATGCAGGCTTTCAGGCAATCCACCTTTCTATGAGGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS CAA 72 bp CTCCCCGTGGCCAGCTCCAGGAAGATAAAGTACTCCTaGCGGGTCACAAACACATCCACCAGCTGTAGGATG +
Preference number: 6 (lower is better)
Translates to: LPVASSRKIKYS*RVTNTSTSCRM
Trigger: CATCCTACAGCTGGTGGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTTCCTGGAGCTGGCCACGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000467248.5
ENST00000475665.5
ENST00000477224.6
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp GGATTGCCCAGATACTCGGGGGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGCTTAGCCAGATGGAAG +
Preference number: 6 (lower is better)
Translates to: GLPRYSGVPQGS*MRPFSSLARWK
Trigger: CTTCCATCTGGCTAAGCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGACCCCCGAGTATCTGGGCAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296471.11
ENST00000620470.4
CDS CAA 72 bp TGCTTGCCCAGATACTCGGGGGTCCCACAGGGCTCCTaGATGAGGCCATTTTCTAGCTTAGCCAGATGGAAG +
Preference number: 6 (lower is better)
Translates to: CLPRYSGVPQGS*MRPFSSLARWK
Trigger: CTTCCATCTGGCTAAGCTAGAAAATGGCCTCATCAAGGAGCCCTGTGGGACCCCCGAGTATCTGGGCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472895.5
ENST00000475665.5
ENST00000479704.5
CDS CAA 90 bp AGTGCAAATAGGCCACGGCCTCCAGGACTTGCCGTACCACGTTGCTaGTGTCTCGCTCCGAGTAGTAGCCAGCTCCAGGAAGATAAAGTA +
Preference number: 6 (lower is better)
Translates to: SANRPRPPGLAVPRC*CLAPSSSQLQEDKV
Trigger: TACTTTATCTTCCTGGAGCTGGCTACTACTCGGAGCGAGACACAAGCAACGTGGTACGGCAAGTCCTGGAGGCCGTGGCCTATTTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS CAA 90 bp TTCTGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCACTGCAGCCGACAGGC +
Preference number: 6 (lower is better)
Translates to: FWNFLQVCSLPVVLS*ARKISQNSSLQPTG
Trigger: GCCTGTCGGCTGCAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS CAA 90 bp TTCTGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCACTGACAGGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: FWNFLQVCSLPVVLS*ARKISQNSSLTGPA
Trigger: TGCCGGGCCTGTCAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498324.5
CDS CAA 72 bp TTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCACTCCGA +
Preference number: 6 (lower is better)
Translates to: FLQVCSLPVVLS*ARKISQNSSLR
Trigger: TCGGAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467248.5
CDS CAA 72 bp TTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCACTGCAG +
Preference number: 6 (lower is better)
Translates to: FLQVCSLPVVLS*ARKISQNSSLQ
Trigger: CTGCAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476105.1
CDS CAA 90 bp TTCTGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCACTCCGATGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: FWNFLQVCSLPVVLS*ARKISQNSSLRWLV
Trigger: AACCAGCCATCGGAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467248.5
CDS CAA 72 bp TTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: FLQVCSLPVVLS*ARKISQNSSVL
Trigger: CAAGACTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000472895.5
ENST00000475665.5
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000620470.4
CDS CAA 72 bp TGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTaGTCCTTGGCCCGGAAGATTTCACAAAACTCCTCA +
Preference number: 6 (lower is better)
Translates to: WNFLQVCSLPVV*SLARKISQNSS
Trigger: TGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000467248.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp CGAGTAGTAGCCAGCTCCAGGAAGATAAAGTACTCCTaGCGGGTCACAAACACATCCACCAGCTGTAGGATG +
Preference number: 6 (lower is better)
Translates to: RVVASSRKIKYS*RVTNTSTSCRM
Trigger: CATCCTACAGCTGGTGGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTTCCTGGAGCTGGCTACTACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466535.5
CDS CAA 72 bp ACAAAACTCCTCACTGACAGGCCCGGCACTCACGTCTaGATGACCTGTCCCAAATCATATCTGTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: TKLLTDRPGTHV*MTCPKSYLSVT
Trigger: GGTGACTGACAGATATGATTTGGGACAGGTCATCAAGACGTGAGTGCCGGGCCTGTCAGTGAGGAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498324.5
CDS CAA 72 bp TTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCACTGACA +
Preference number: 6 (lower is better)
Translates to: FLQVCSLPVVLS*ARKISQNSSLT
Trigger: TGTCAGTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498324.5
CDS CAA 90 bp TTCTGGAACTTCTTGCAGGTGTGCAGCTTGCCTGTCGTCTTGTCCTaGGCCCGGAAGATTTCACAAAACTCCTCAGTCTTGATGACCTGT +
Preference number: 6 (lower is better)
Translates to: FWNFLQVCSLPVVLS*ARKISQNSSVLMTC
Trigger: ACAGGTCATCAAGACTGAGGAGTTTTGTGAAATCTTCCGGGCCAAGGACAAGACGACAGGCAAGCTGCACACCTGCAAGAAGTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000472895.5
ENST00000475665.5
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000620470.4
CDS GCA 72 bp AATCATCTTCTTCCACCTCCTCATAGAAAGGTGGATTaGCTGAAAGCCTGCATGGGGGAAGGGTCACACAGA +
Preference number: 6 (lower is better)
Translates to: NHLLPPPHRKVD*LKACMGEGSHR
Trigger: TCTGTGTGACCCTTCCCCCATGCAGGCTTTCAGGCAATCCACCTTTCTATGAGGAGGTGGAAGAAGATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478149.5
CDS CCA 72 bp GACCTGTCCCAAATCATATCTGTCAGTCACCTCCGATaGCTGGTTATAGTTCTTCTTGTCGCCCAGAGTCAC +
Preference number: 6 (lower is better)
Translates to: DLSQIISVSHLR*LVIVLLVAQSH
Trigger: GTGACTCTGGGCGACAAGAAGAACTATAACCAGCCATCGGAGGTGACTGACAGATATGATTTGGGACAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296471.11
ENST00000463537.5
ENST00000466535.5
ENST00000466940.5
ENST00000472895.5
ENST00000475665.5
ENST00000476105.1
ENST00000477224.6
ENST00000483811.5
ENST00000487726.5
ENST00000488336.5
ENST00000498324.5
ENST00000620470.4
CDS CAA 72 bp AGCTTGAGATTCAGCTCCAGGAAGATAAAGTACTCCTaGCGGGTCACAAACACATCCACCAGCTGTAGGATG +
Preference number: 6 (lower is better)
Translates to: SLRFSSRKIKYS*RVTNTSTSCRM
Trigger: CATCCTACAGCTGGTGGATGTGTTTGTGACCCGCAAGGAGTACTTTATCTTCCTGGAGCTGAATCTCAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466940.5