RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMKK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000004660

Ensembl transcript IDs: ENST00000158166.5, ENST00000348335.7, ENST00000381769.6, ENST00000573483.1

Found 659 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCCAGGCTCTGGCCTTGGCCCAACGACAGTGAGAGTGGGAGGATaGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGT +
Preference number: 1 (lower is better)
Translates to: SPGSGLGPTTVRVGG*ASDLPTQLQGVPGS
Trigger: ACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCTCACTGTCGTTGGGCCAAGGCCAGAGCCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR TCA 90 bp TCTGCCTCCTGCCCCAGGCCATGCCAACCAGCCGGGTGGCATTTCTaGGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: SASCPRPCQPAGWHF*GSMGTRFPHRMGQA
Trigger: GGCCTGACCCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTGGTTGGCATGGCCTGGGGCAGGAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp GCCCCAGGCCATGCCAACCAGCCGGGTGGCATTTCTGAGGCTCCATaGGCACCCGGTTTCCCCACAGAATGGGTCAGGCCAAGGAGGTCC +
Preference number: 1 (lower is better)
Translates to: APGHANQPGGISEAP*APGFPTEWVRPRRS
Trigger: GGACCTCCTTGGCCTGACCCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTGGTTGGCATGGCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp TGGCTCACCATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTaGTCCACCGGCCAGCCTGTCCCTGCTTACTCACTGAACAAGCAC +
Preference number: 1 (lower is better)
Translates to: WLTIGSPRPMRVPLP*STGQPVPAYSLNKH
Trigger: GTGCTTGTTCAGTGAGTAAGCAGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTATGGTGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR CCA 90 bp GCAGCTCTTGGGCCCAGATGGGTAGGCCGGTGTAGGAGGAGAGGCTaGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGC +
Preference number: 1 (lower is better)
Translates to: AALGPRWVGRCRRRG*VPVISACAGPQACR
Trigger: GCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 90 bp GTAGGCCGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATaGGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAG +
Preference number: 1 (lower is better)
Translates to: VGRCRRRGWVPVISA*AGPQACRVHGPRSK
Trigger: CTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCGGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 90 bp GCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCACGCGACATaGACCCACAGGCGCGGAGATGCAGCGGGATCCGGGTTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: AGHTSELCATDEHAT*THRRGDAAGSGFLP
Trigger: GGGGAGAAACCCGGATCCCGCTGCATCTCCGCGCCTGTGGGTGCATGTCGCGTGCTCATCTGTTGCACACAGCTCACTCGTATGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp GGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCTaGACCCTCCTAGGAGGTGGTGAACCCACAGGCGTGGCTCACCAT +
Preference number: 1 (lower is better)
Translates to: GSAEDEAHRLGELLF*TLLGGGEPTGVAHH
Trigger: ATGGTGAGCCACGCCTGTGGGTTCACCACCTCCTAGGAGGGTCCAGAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR CCA 90 bp GGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATaGGTCAGGCCAAGGAGGTCCAAGAAGAGGAGGATGGCCTCGTGG +
Preference number: 1 (lower is better)
Translates to: GGISEAPWAPGFPTE*VRPRRSKKRRMASW
Trigger: CCACGAGGCCATCCTCCTCTTCTTGGACCTCCTTGGCCTGACCCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp TCCAGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATaGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: SSYFSMRRATGLSRP*PSVKVSPGVFSSLS
Trigger: GCTGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR TCA 90 bp AAGCTGCATGGAAGAAGGGTCTTCCTGTCCCATGGAGGGGCTGCGTaGGCTCCTCATCCCTGGAAGTGTGTGTGTGAGGGATGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: KLHGRRVFLSHGGAA*APHPWKCVCEGCWP
Trigger: GGGCCAGCATCCCTCACACACACACTTCCAGGGATGAGGAGCTCACGCAGCCCCTCCATGGGACAGGAAGACCCTTCTTCCATGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR TCA 90 bp GAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTaGTCCCTCCGACCTGGACAGTTTGTCCTTCGTTGTAGGAGTGTG +
Preference number: 1 (lower is better)
Translates to: EATCQRAHPSRFCVS*SLRPGQFVLRCRSV
Trigger: CACACTCCTACAACGAAGGACAAACTGTCCAGGTCGGAGGGATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 90 bp CGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCAGCAAATaGCACGTCGGCCAGCCGGACACTGATCCCAGAGAGAAGGTGAAG +
Preference number: 1 (lower is better)
Translates to: RDPVGVNLYEHSVSK*HVGQPDTDPREKVK
Trigger: CTTCACCTTCTCTCTGGGATCAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp TCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATaGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTGCTCAGA +
Preference number: 1 (lower is better)
Translates to: SPASALGASSRERVR*AGTMWCFRFRPLLR
Trigger: TCTGAGCAGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp TCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTaGGGGTCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCG +
Preference number: 1 (lower is better)
Translates to: SIHVSRAVSESCVTL*GSTSMSIRSANATS
Trigger: CGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 90 bp CAAAAGCCCTTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTaGGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: QKPLSIHVSRAVSES*VTLWGSTSMSIRSA
Trigger: TGCTGACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAAGGGCTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp TCCCTTCTCCAAACAAGCCCTCCTCCAACAGGACACCCACACCTGTaGCCAAAAGCCCTTGTCCATCCATGTTTCCAGGGCAGTGTCCGA +
Preference number: 1 (lower is better)
Translates to: SLLQTSPPPTGHPHL*PKALVHPCFQGSVR
Trigger: TCGGACACTGCCCTGGAAACATGGATGGACAAGGGCTTTTGGCCACAGGTGTGGGTGTCCTGTTGGAGGAGGGCTTGTTTGGAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR TCA 90 bp GCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTGCTCAGAGCTTaGTTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACA +
Preference number: 1 (lower is better)
Translates to: AGTMWCFRFRPLLRA*FRSVHFPDNAECET
Trigger: TGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp TTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATaGGTAGGCCGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCA +
Preference number: 1 (lower is better)
Translates to: FVLRCRSVSAALGPR*VGRCRRRGWVPVIS
Trigger: TGAAATAACTGGAACCCAGCCTCTCCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 90 bp ACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTTaGCTGCCAAATAATCTTGGGCTGTGCTGGGAACCACGGAAGATG +
Preference number: 1 (lower is better)
Translates to: TPNAKHSPGKLVPST*LPNNLGLCWEPRKM
Trigger: CATCTTCCGTGGTTCCCAGCACAGCCCAAGATTATTTGGCAGCCAAGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCCCAACTCCAGGGAGTaGCCGGCAGTCCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: GALGQCGFLSRGPPASLSPNSRE*PAVPGP
Trigger: TGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGG...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR TCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCGGGGCGGCTGTTGCATaGGGGGTGGGCCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: HAQGHRPVASMALGQSQPGAAVA*GVGLWR
Trigger: CCTCCAGAGGCCCACCCCTCATGCAACAGCCGCCCC...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCATGGAGGGGCTGCGTaGGCTCCTCATCCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: GALGQCGFLSRGPPASLSHGGAA*APHPWK
Trigger: CTTCCAGGGATGAGGAGCTCACGCAGCCCCTCCATG...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR TCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCTGCTGGCCCCAGGAATaGAGCAAGAGCTGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: GALGQCGFLSRGPPASLSCWPQE*SKSWAQ
Trigger: TTGGGCCCAGCTCTTGCTTCATTCCTGGGGCCAGCA...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR GCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTCCTGCCCCAGGCCATaGCAACCAGCCGGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: HAQGHRPVASMALGQSQPSCPRP*QPAGWH
Trigger: ATGCCACCCGGCTGGTTGGCATGGCCTGGGGCAGGA...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCAAGTCCCCAGGCTCTaGCCTTGGCCCAACGACAGT +
Preference number: 2 (lower is better)
Translates to: GALGQCGFLSRGPPASLSQVPRL*PWPNDS
Trigger: ACTGTCGTTGGGCCAAGGCCAGAGCCTGGGGACTTG...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR CCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACCTGTTGCATGAGGGGTaGGCCTCTGGAGGCGCGGGA +
Preference number: 2 (lower is better)
Translates to: PEELCLHALQHPRSEQADLLHEG*ASGGAG
Trigger: TCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACAG...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCAGGGGCTGGACCCAGTaGGAGAGTGACATCAAGCTG +
Preference number: 2 (lower is better)
Translates to: GALGQCGFLSRGPPASLSRGWTQ*ESDIKL
Trigger: CAGCTTGATGTCACTCTCTCACTGGGTCCAGCCCCT...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR TCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGCCGGGTGGCATTTCTaGGGCTCCATGGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRAGWHF*GSMGTR
Trigger: CCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGC...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGTGCGGGGGCGGCTGTTaGATGAGGGGTGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWCGGGC*MRGGPL
Trigger: CAGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCA...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCAGCCTGGCCTCCACCTaGCATCTTGGTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: HAQGHRPVASMALGQSQPSLAST*HLGLLP
Trigger: AGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCT...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACAGACAAGAGCTCTGGTaGCACCACCCCAAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PEELCLHALQHPRSEQADRQELW*HHPKVG
Trigger: GCCCACCTTGGGGTGGTGGCACCAGAGCTCTTGTCT...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGCCGCAGAGGCCACCTaGCAGCGTGCACACCCCTCC +
Preference number: 2 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGAAEAT*QRAHPS
Trigger: GGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCGGACAGAGATGCAAATaGGGCCAACACCGAGACCTG +
Preference number: 2 (lower is better)
Translates to: GALGQCGFLSRGPPASLSGQRCK*GQHRDL
Trigger: CAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCC...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR CCA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGGGTCATGCAGCACGATaGGGGAGGGGCGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRGHAAR*GRGGSG
Trigger: CCCACTCCCGCCCCTCCCCCATCGTGCTGCATGACC...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACTCCACCATATGCCTGTaGCAGCTGAGCCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: PEELCLHALQHPRSEQADSTICL*QLSQAC
Trigger: GCAGGCCTGGCTCAGCTGCCACAGGCATATGGTGGA...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CAA 90 bp CCCGCTCTGAGCAGGCTGACTGCTGATGTCCTCAGGGTGAGGCAATaGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: PALSRLTADVLRVRQ*PQRPPASVHTPPGS
Trigger: AGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAATTGCCTCACCCTGAGGACATCAGCAGTCAGCCTGCTCAGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTTCTGGAGGCGCGGGATaGGTGTGCTGCCGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: KGESEMGRDDVVLPLQASSGGAG*VCCRVA
Trigger: GGCCACCCGGCAGCACACTCATCCCGCGCCTCCAGA...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGCCGGGTGGCATTTCTaGGGCTCCATGGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGAGWHF*GSMGTR
Trigger: CCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTGCGGGGGCGGCTGTTaGATGAGGGGTGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGCGGGC*MRGGPL
Trigger: CAGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCA...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAAGTCCCTGGACGTGCGTaGGTGGAGGTCATGCAGCAC +
Preference number: 2 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKVPGRA*VEVMQH
Trigger: GTGCTGCATGACCTCCACGCACGCACGTCCAGGGAC...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGGTCATGCAGCACGATaGGGGAGGGGCGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGGHAAR*GRGGSG
Trigger: CCCACTCCCGCCCCTCCCCCATCGTGCTGCATGACC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCCCAAGAAGAGGAGGATaGCCTCGTGGGAGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIPRRGG*PRGSPA
Trigger: GGCAGGGCTCCCACGAGGCCATCCTCCTCTTCTTGG...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTGACCCAGTGAGAGAGTaGCATCAAGCTGCATGGAAG +
Preference number: 2 (lower is better)
Translates to: REPSANAGSSPVVHRPACDPVRE*HQAAWK
Trigger: CTTCCATGCAGCTTGATGTCACTCTCTCACTGGGTC...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR TCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGAGGGGCGGCTGTTGCATaGGGGGTGGGCCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARGAAVA*GVGLWR
Trigger: CCTCCAGAGGCCCACCCCTCATGCAACAGCCGCCCC...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACCATCAAGGGAGAGAGTaGGATGGGCAGGGACGATGT +
Preference number: 2 (lower is better)
Translates to: PEELCLHALQHPRSEQADHQGRE*DGQGRC
Trigger: ACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATG...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAACTGATGTCCTCAGGGTaGGGCAATTGCCGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKLMSSG*GNCRRG
Trigger: GCCTCTGCGGCAATTGCCTCACCCTGAGGACATCAG...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGGTCCCTGGACGTGCGTaGGTGGAGGTCATGCAGCAC +
Preference number: 2 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWVPGRA*VEVMQH
Trigger: GTGCTGCATGACCTCCACGCACGCACGTCCAGGGAC...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAACATTCGGTCAGCAAATaGCACGTCGGCCAGCCGGAC +
Preference number: 2 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKHSVSK*HVGQPD
Trigger: GTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATG...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTCTCCACCTGCCATCTTaGTCTCCTGCCTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRLHLPS*SPASAS
Trigger: GGAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAG...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGTCCTGCCCCAGGCCATaGCAACCAGCCGGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKSCPRP*QPAGWH
Trigger: ATGCCACCCGGCTGGTTGGCATGGCCTGGGGCAGGA...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGCCCCTCTCCACCATATaGCTGTGGCAGCTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRPLSTI*LWQLSQ
Trigger: CTGGCTCAGCTGCCACAGGCATATGGTGGAGAGGGG...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCGCTCTTGGGCCCAGATaGGTAGGCCGGTGTAGGAGG +
Preference number: 2 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVALGPR*VGRCRR
Trigger: CCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGC...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAATCCTGCGTGACCCTGTaGGGGTCAACCTCTATGAGC +
Preference number: 2 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKSCVTL*GSTSMS
Trigger: GCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGA...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCCATCAAGGGAGAGAGTaGGATGGGCAGGGACGATGT +
Preference number: 2 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIHQGRE*DGQGRC
Trigger: ACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATG...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGAGCCTGGCCTCCACCTaGCATCTTGGTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWSLAST*HLGLLP
Trigger: AGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCT...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGCCCCTCTCCACCATATaGCTGTGGCAGCTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWPLSTI*LWQLSQ
Trigger: CTGGCTCAGCTGCCACAGGCATATGGTGGAGAGGGG...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCTGTTGCATGAGGGGTaGGCCTCTGGAGGCGCGGGA +
Preference number: 2 (lower is better)
Translates to: STSMSIRSANATSASRTLLLHEG*ASGGAG
Trigger: TCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACAG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGATTCCAGTCTGTCCCTaGACGTGCGTGCGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWIPVCP*TCVRGG
Trigger: ACCTCCACGCACGCACGTCCAGGGACAGACTGGAAT...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCTGGGCAGGGACGATGTaGTGCTTCCGCTTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVWAGTM*CFRFRP
Trigger: AGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCA...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CAA 90 bp CAAGCCCTCCTCCAACAGGACACCCACACCTGTGGCCAAAAGCCCTaGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACC +
Preference number: 2 (lower is better)
Translates to: QALLQQDTHTCGQKP*SIHVSRAVSESCVT
Trigger: GGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAAGGGCTTTTGGCCACAGGTGTGGGTGTCCTGTTGGAGGAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTAGAGTGACATCAAGCTaGATGGAAGAAGGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPRVTSS*MEEGSS
Trigger: GGAAGACCCTTCTTCCATGCAGCTTGATGTCACTCT...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR GCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTGTCTGTCCCTGGACGTaGGTGCGTGGAGGTCATGCA +
Preference number: 2 (lower is better)
Translates to: KGESEMGRDDVVLPLQASVCPWT*VRGGHA
Trigger: TGCATGACCTCCACGCACGCACGTCCAGGGACAGAC...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCAGCTGAGCCAGGCCTaGCCGGCCCCAGCGGGAGGT +
Preference number: 2 (lower is better)
Translates to: TDACTSAGHTSELCATDEQLSQA*PAPAGG
Trigger: ACCTCCCGCTGGGGCCGGGCAGGCCTGGCTCAGCTG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCTGGACGTGCGTGCGTaGAGGTCATGCAGCACGATG +
Preference number: 2 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVLDVRA*RSCSTM
Trigger: CATCGTGCTGCATGACCTCCACGCACGCACGTCCAG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCAGGTTTCCCCACAGAATaGGTCAGGCCAAGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: CRVHGPRSKSALVSSPASGFPTE*VRPRRS
Trigger: GGACCTCCTTGGCCTGACCCATTCTGTGGGGAAACC...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCTCCACCTGCCATCTTaGTCTCCTGCCTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVLHLPS*SPASAS
Trigger: GGAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCCCTCTGCTCAGAGCTTaGTTCCGTTCAGTCCACTTT +
Preference number: 2 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIPLLRA*FRSVHF
Trigger: AAAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGG...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGGGGGGTCAACCTCTATaGGCATTCGGTCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRGGQPL*AFGQQM
Trigger: CATTTGCTGACCGAATGCTCATAGAGGTTGACCCCC...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGCCAAGAAGAGGAGGATaGCCTCGTGGGAGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQPRRGG*PRGSPA
Trigger: GGCAGGGCTCCCACGAGGCCATCCTCCTCTTCTTGG...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAATAGACAAGAGCTCTaGTGCCACCACCCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVNRQEL*CHHPKV
Trigger: CACCTTGGGGTGGTGGCACCAGAGCTCTTGTCTATT...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAATCTGGAGGCGCGGGATaGGTGTGCTGCCGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: FRSVHFPDNAECETQSRKSGGAG*VCCRVA
Trigger: GGCCACCCGGCAGCACACTCATCCCGCGCCTCCAGA...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGCCCCATACCAGCGTCTaGATAGACAAGAGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGPHTSV*IDKSSG
Trigger: ACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGG...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCGGGGGTCAACCTCTATaGGCATTCGGTCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVGGQPL*AFGQQM
Trigger: CATTTGCTGACCGAATGCTCATAGAGGTTGACCCCC...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCCCTTGGGGACAGAGATaGAAATGGGGCCAACACCGA +
Preference number: 2 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFPWGQR*KWGQHR
Trigger: TCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGG...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCATTTCTGAGGCTCCATaGGCACCCGGTTTCCCCACA +
Preference number: 2 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVISEAP*APGFPT
Trigger: TGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAAT...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAATGTAGGAGGAGAGGCTaGGTTCCAGTTATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKCRRRG*VPVISA
Trigger: TGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACA...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCCAGTTATTTCAGCATaGGCAGGGCCACAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: STSMSIRSANATSASRTLPVISA*AGPQAC
Trigger: ACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCCTCCTAGGAGGTGGTaGACCCACAGGCGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRPPRRW*THRRGS
Trigger: TGAGCCACGCCTGTGGGTTCACCACCTCCTAGGAGG...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR GCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCAAATAATCTTGGGCTGTaGTGGGAACCACGGAAGATG +
Preference number: 2 (lower is better)
Translates to: CRVHGPRSKSALVSSPASNNLGL*WEPRKM
Trigger: CATCTTCCGTGGTTCCCAGCACAGCCCAAGATTATT...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCACCAGATAACGCCGAATaGGAAACACAGTCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: CRVHGPRSKSALVSSPASPDNAE*ETQSRK
Trigger: TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGG...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCCACAGGCGCGGAGATaGAGCGGGATCCGGGTTTCT +
Preference number: 2 (lower is better)
Translates to: TDACTSAGHTSELCATDEPQARR*SGIRVS
Trigger: AGAAACCCGGATCCCGCTGCATCTCCGCGCCTGTGG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGGGTCTTCCTGTCCCATaGAGGGGCTGCGTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRGLPVP*RGCVSS
Trigger: GGAGCTCACGCAGCCCCTCCATGGGACAGGAAGACC...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR CCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGATTTCTGAGGCTCCATaGGCACCCGGTTTCCCCACA +
Preference number: 2 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWISEAP*APGFPT
Trigger: TGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAAT...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGAATAGACAAGAGCTCTaGTGCCACCACCCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: STSMSIRSANATSASRTLNRQEL*CHHPKV
Trigger: CACCTTGGGGTGGTGGCACCAGAGCTCTTGTCTATT...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGGCTCTTGGGCCCAGATaGGTAGGCCGGTGTAGGAGG +
Preference number: 2 (lower is better)
Translates to: TDACTSAGHTSELCATDEALGPR*VGRCRR
Trigger: CCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGC...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGTGTGAGTGCAGCTCTTaGGCCCAGATGGGTAGGCCG +
Preference number: 2 (lower is better)
Translates to: TDACTSAGHTSELCATDECECSS*AQMGRP
Trigger: CGGCCTACCCATCTGGGCCCAAGAGCTGCACTCACA...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGCCCCAAGACCCCAAATaGCATACATTCCAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMPQDPK*HTFQSV
Trigger: GACAGACTGGAATGTATGTCATTTGGGGTCTTGGGG...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGCCCCAAGACCCCAAATaGCATACATTCCAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQPQDPK*HTFQSV
Trigger: GACAGACTGGAATGTATGTCATTTGGGGTCTTGGGG...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGCCTCTGCTCAGAGCTTaGTTCCGTTCAGTCCACTTT +
Preference number: 2 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWPLLRA*FRSVHF
Trigger: AAAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGG...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGATCCCAGAGAGAAGGTaGAGGCTGCTCCGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: TDACTSAGHTSELCATDEIPERR*RLLRKS
Trigger: GCTCTTCCGGAGCAGCCTTCACCTTCTCTCTGGGAT...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGCAGCTGAGCCAGGCCTaGCCGGCCCCAGCGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LNRRRNCITDACTSAGHTQLSQA*PAPAGG
Trigger: ACCTCCCGCTGGGGCCGGGCAGGCCTGGCTCAGCTG...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGAAACTGTATTACAGATaGATGTACCAGTGCAGGACA +
Preference number: 2 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRKLYYR*MYQCRT
Trigger: TGTCCTGCACTGGTACATGCATCTGTAATACAGTTT...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAACTGGACGTGCGTGCGTaGAGGTCATGCAGCACGATG +
Preference number: 2 (lower is better)
Translates to: FRSVHFPDNAECETQSRKLDVRA*RSCSTM
Trigger: CATCGTGCTGCATGACCTCCACGCACGCACGTCCAG...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCATTAGTTCCATCCACTTaGCTGCCAAATAATCTTGGG +
Preference number: 2 (lower is better)
Translates to: CRVHGPRSKSALVSSPASLVPST*LPNNLG
Trigger: CCCAAGATTATTTGGCAGCCAAGTGGATGGAACTAA...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGTTCCATCCACTTGGCTaGCAAATAATCTTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: STSMSIRSANATSASRTLFHPLG*QIILGC
Trigger: ACAGCCCAAGATTATTTGGCAGCCAAGTGGATGGAA...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTATTCCAGTCTGTCCCTaGACGTGCGTGCGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: RSVHFPDNAECETQSRKVIPVCP*TCVRGG
Trigger: ACCTCCACGCACGCACGTCCAGGGACAGACTGGAAT...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGTGTAGGAGGAGAGGCTaGGTTCCAGTTATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: TDACTSAGHTSELCATDECRRRG*VPVISA
Trigger: TGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACA...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR TCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGCTGATGTCCTCAGGGTaGGGCAATTGCCGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: LNRRRNCITDACTSAGHTLMSSG*GNCRRG
Trigger: GCCTCTGCGGCAATTGCCTCACCCTGAGGACATCAG...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGGTCTGTCCCTGGACGTaGGTGCGTGGAGGTCATGCA +
Preference number: 2 (lower is better)
Translates to: LNRRRNCITDACTSAGHTVCPWT*VRGGHA
Trigger: TGCATGACCTCCACGCACGCACGTCCAGGGACAGAC...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR GCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAATAATCTTGGGCTGTaGTGGGAACCACGGAAGATG +
Preference number: 2 (lower is better)
Translates to: RSVHFPDNAECETQSRKVNNLGL*WEPRKM
Trigger: CATCTTCCGTGGTTCCCAGCACAGCCCAAGATTATT...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGGGTTTCCCCACAGAATaGGTCAGGCCAAGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: LNRRRNCITDACTSAGHTGFPTE*VRPRRS
Trigger: GGACCTCCTTGGCCTGACCCATTCTGTGGGGAAACC...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTCTGCGGGGGCGGCTGTaGCATGAGGGGTGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGLRGRL*HEGWAS
Trigger: AGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCAG...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTaGTCCACCGGCCAGCCTGTCCCTGCTTACTCACTG +
Preference number: 3 (lower is better)
Translates to: IGSPRPMRVPLP*STGQPVPAYSL
Trigger: CAGTGAGTAAGCAGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR TCA 72 bp TGCCCCAGGCCATGCCAACCAGCCGGGTGGCATTTCTaGGGCTCCATGGGCACCCGGTTTCCCCACAGAATG +
Preference number: 3 (lower is better)
Translates to: CPRPCQPAGWHF*GSMGTRFPHRM
Trigger: CATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTGGTTGGCATGGCCTGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 72 bp ACGAGTGAGCTGTGTGCAACAGATGAGCACGCGACATaGACCCACAGGCGCGGAGATGCAGCGGGATCCGGG +
Preference number: 3 (lower is better)
Translates to: TSELCATDEHAT*THRRGDAAGSG
Trigger: CCCGGATCCCGCTGCATCTCCGCGCCTGTGGGTGCATGTCGCGTGCTCATCTGTTGCACACAGCTCACTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp TCTGGCCTTGGCCCAACGACAGTGAGAGTGGGAGGATaGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTG +
Preference number: 3 (lower is better)
Translates to: SGLGPTTVRVGG*ASDLPTQLQGV
Trigger: CACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCTCACTGTCGTTGGGCCAAGGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR CCA 72 bp GAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCTaGACCCTCCTAGGAGGTGGTGAACCCACAGGCGTG +
Preference number: 3 (lower is better)
Translates to: EDEAHRLGELLF*TLLGGGEPTGV
Trigger: CACGCCTGTGGGTTCACCACCTCCTAGGAGGGTCCAGAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR CCA 72 bp GACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTaGAGGTCATGCAGCACGATGGGGGAGGGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: DIHSSLSLDVRA*RSCSTMGEGRE
Trigger: CTCCCGCCCCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp TTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATaGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: FSMRRATGLSRP*PSVKVSPGVFS
Trigger: GGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGCCTCCACCTGCCATCTaGGTCTCCTGCCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRPPPAI*VSCLCL
Trigger: GAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAGG...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGCTCAGGGTGAGGCAATaGCCGCAGAGGCCACCTGCC +
Preference number: 3 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGLRVRQ*PQRPPA
Trigger: GGCAGGTGGCCTCTGCGGCAATTGCCTCACCCTGAG...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCGGCAGCCTGGGCCACTaGGGAGAGCAGCCAACAGTC +
Preference number: 3 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFGSLGH*GEQPTV
Trigger: GACTGTTGGCTGCTCTCCCAAGTGGCCCAGGCTGCC...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR-3UTR CAA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGCTGCGGGGGCGGCTGTaGCATGAGGGGTGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQLRGRL*HEGWAS
Trigger: AGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCAG...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp CATGCCAACCAGCCGGGTGGCATTTCTGAGGCTCCATaGGCACCCGGTTTCCCCACAGAATGGGTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: HANQPGGISEAP*APGFPTEWVRP
Trigger: TGGCCTGACCCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTGGTTGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp GGGCCCAGATGGGTAGGCCGGTGTAGGAGGAGAGGCTaGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAG +
Preference number: 3 (lower is better)
Translates to: GPRWVGRCRRRG*VPVISACAGPQ
Trigger: CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCGGCCTACCCATCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 72 bp TGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATaGGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCT +
Preference number: 3 (lower is better)
Translates to: CRRRGWVPVISA*AGPQACRVHGP
Trigger: AGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp AATGGGTCAGGCCAAGGAGGTCCAAGAAGAGGAGGATaGCCTCGTGGGAGCCCTGCCCCCAAGACCCCAAAT +
Preference number: 3 (lower is better)
Translates to: NGSGQGGPRRGG*PRGSPAPKTPN
Trigger: ATTTGGGGTCTTGGGGGCAGGGCTCCCACGAGGCCATCCTCCTCTTCTTGGACCTCCTTGGCCTGACCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp CGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATaGGTAGGCCGGTGTAGGAGGAGAGGCTGGGTTCCA +
Preference number: 3 (lower is better)
Translates to: RCRSVSAALGPR*VGRCRRRGWVP
Trigger: TGGAACCCAGCCTCTCCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGGGCTGCCAAATAATCTaGGGCTGTGCTGGGAACCAC +
Preference number: 3 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRGCQII*GCAGNH
Trigger: GTGGTTCCCAGCACAGCCCAAGATTATTTGGCAGCC...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGCCTCTGCTCAGAGCTaGATTCCGTTCAGTCCACTT +
Preference number: 3 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRASAQS*IPFSPL
Trigger: AAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGGC...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR TCA 72 bp GGAAGAAGGGTCTTCCTGTCCCATGGAGGGGCTGCGTaGGCTCCTCATCCCTGGAAGTGTGTGTGTGAGGGA +
Preference number: 3 (lower is better)
Translates to: GRRVFLSHGGAA*APHPWKCVCEG
Trigger: TCCCTCACACACACACTTCCAGGGATGAGGAGCTCACGCAGCCCCTCCATGGGACAGGAAGACCCTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR TCA 72 bp TTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTaGTCCCAGAGAGAAGGTGAAGGCTGCTCCGGAAGA +
Preference number: 3 (lower is better)
Translates to: FGQQMPRRPAGH*SQREGEGCSGR
Trigger: TCTTCCGGAGCAGCCTTCACCTTCTCTCTGGGATCAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 72 bp CCCCAAATGACATACATTCCAGTCTGTCCCTGGACGTaGGTGCGTGGAGGTCATGCAGCACGATGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: PQMTYIPVCPWT*VRGGHAARWGR
Trigger: CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGTCATTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 72 bp GTGGGGGTCAACCTCTATGAGCATTCGGTCAGCAAATaGCACGTCGGCCAGCCGGACACTGATCCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: VGVNLYEHSVSK*HVGQPDTDPRE
Trigger: CTCTCTGGGATCAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGACCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR TCA 72 bp TGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTaGTCCCTCCGACCTGGACAGTTTGTCCTTCGTTGT +
Preference number: 3 (lower is better)
Translates to: CQRAHPSRFCVS*SLRPGQFVLRC
Trigger: ACAACGAAGGACAAACTGTCCAGGTCGGAGGGATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGACTCAGGGTGAGGCAATaGCCGCAGAGGCCACCTGCC +
Preference number: 3 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRLRVRQ*PQRPPA
Trigger: GGCAGGTGGCCTCTGCGGCAATTGCCTCACCCTGAG...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR TCA 72 bp CCCTGCTTACTCACTGAACAAGCACTCACAAAGTGCTaGCTGGGCACAGAGCCCCAGCAATGGCTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: PCLLTEQALTKC*LGTEPQQWLQA
Trigger: TGCCTGCAGCCATTGCTGGGGCTCTGTGCCCAGTCAGCACTTTGTGAGTGCTTGTTCAGTGAGTAAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
3UTR CCA 72 bp CCAAGACCCCAAATGACATACATTCCAGTCTGTCCCTaGACGTGCGTGCGTGGAGGTCATGCAGCACGATGG +
Preference number: 3 (lower is better)
Translates to: PRPQMTYIPVCP*TCVRGGHAARW
Trigger: CCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGTCATTTGGGGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp GTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTaGGGGTCAACCTCTATGAGCATTCGGTCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: VSRAVSESCVTL*GSTSMSIRSAN
Trigger: ATTTGCTGACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 72 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTaGGTGACCCTGTGGGGGTCAACCTCTATGAGCATT +
Preference number: 3 (lower is better)
Translates to: LSIHVSRAVSES*VTLWGSTSMSI
Trigger: AATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR GCA 72 bp ACAGTACCGAGTAACTTTTTAAGCTTCGGGCCACACTaGCTTAGCCCAGAGGAGCCGGGGAGAAACGTGGAC +
Preference number: 3 (lower is better)
Translates to: TVPSNFLSFGPH*LSPEEPGRNVD
Trigger: GTCCACGTTTCTCCCCGGCTCCTCTGGGCTAAGGCAGTGTGGCCCGAAGCTTAAAAAGTTACTCGGTACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR TCA 72 bp ATGTGGTGCTTCCGCTTCAGGCCTCTGCTCAGAGCTTaGTTCCGTTCAGTCCACTTTCCAGATAACGCCGAA +
Preference number: 3 (lower is better)
Translates to: MWCFRFRPLLRA*FRSVHFPDNAE
Trigger: TTCGGCGTTATCTGGAAAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGGCCTGAAGCGGAAGCACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGGCTGCCAAATAATCTaGGGCTGTGCTGGGAACCAC +
Preference number: 3 (lower is better)
Translates to: FRSVHFPDNAECETQSRKGCQII*GCAGNH
Trigger: GTGGTTCCCAGCACAGCCCAAGATTATTTGGCAGCC...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAGCCTCTGCTCAGAGCTaGATTCCGTTCAGTCCACTT +
Preference number: 3 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRASAQS*IPFSPL
Trigger: AAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGGC...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CCA 72 bp GCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTTaGCTGCCAAATAATCTTGGGCTGTGCTGGGAACCA +
Preference number: 3 (lower is better)
Translates to: AKHSPGKLVPST*LPNNLGLCWEP
Trigger: TGGTTCCCAGCACAGCCCAAGATTATTTGGCAGCCAAGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR-3UTR CAA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGCCTCCACCTGCCATCTaGGTCTCCTGCCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LNRRRNCITDACTSAGHTPPPAI*VSCLCL
Trigger: GAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAGG...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCGGTGGGACTCGATGGTaGGCCTCCGCCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GALGQCGFLSRGPPASLSGGTRW*ASARPG
Trigger: CCCGGGCCTGGCGGAGGCCCACCATCGAGTCCCACC...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCCGTGGTGGGACTCGATaGTGGGCCTCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPRGGTR*WASARP
Trigger: GGGCCTGGCGGAGGCCCACCATCGAGTCCCACCACG...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTCCTCCCTGGGCAGCCTaGGACCCTCTCGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPPPWAA*DPLGGG
Trigger: CCCTCCCCCGAGAGGGTCCCAGGCTGCCCAGGGAGG...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCCGGGTTCCTCTCCCGTaGTCCACCGGCCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPRVPLP*STGQPV
Trigger: GACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCG...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGCCTCGGGGGCCATaGATGCTGGGGTTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPWPRGP*MLGFPP
Trigger: CGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCA...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTGGCCCACCAGTAGGCTGGCAGGCCCCGTaGCATAAGGCCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: QTSPPNSRECPAVPGPPVGWQAP*HKAQPA
Trigger: CGCAGGCTGGGCCTTATGCCACGGGGCCTGCCAGCC...TACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGGGTGGGACTCGATGGTaGGCCTCCGCCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRGGTRW*ASARPG
Trigger: CCCGGGCCTGGCGGAGGCCCACCATCGAGTCCCACC...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCTTGGCTGGTCCTCCCTaGGCAGCCTGGGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: GALGQCGFLSRGPPASLSLAGPP*AAWDPL
Trigger: GAGAGGGTCCCAGGCTGCCCAGGGAGGACCAGCCAA...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTGGCTGCAGGCAGCCTaGGCCACTTGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPWLQAA*ATWESS
Trigger: GCTGCTCTCCCAAGTGGCCCAGGCTGCCTGCAGCCA...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGGGGGCGGCTGTTGCATaGGGGGTGGGCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRGAAVA*GVGLWR
Trigger: CCTCCAGAGGCCCACCCCTCATGCAACAGCCGCCCC...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCGCCGGGTGGCATTTCTaGGGCTCCATGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPAGWHF*GSMGTR
Trigger: CCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGC...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCCCGGGTGGCCCTGGGTaGATGCAGGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPPGGPG*MQGLRM
Trigger: CATCCTGAGCCCCTGCATGCACCCAGGGCCACCCGG...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCAGCTCTGGCCCGTGGTaGGGGGTCCACACCGTTTCT +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPSSGPW*GVHTVS
Trigger: AGAAACGGTGTGGACCCCCCACCACGGGCCAGAGCT...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCGAGATGGCCACGTGGTaGGACTCGATGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPEMATW*DSMVGL
Trigger: GAGGCCCACCATCGAGTCCCACCACGTGGCCATCTC...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTCAGCAGCTGCTTGGCTaGTCCTCCCTGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPQQLLG*SSLGSL
Trigger: CAGGCTGCCCAGGGAGGACCAGCCAAGCAGCTGCTG...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCGGGGCAGCAGCTGCTTaGCTGGTCCTCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGGAAAA*LVLPGQ
Trigger: CTGCCCAGGGAGGACCAGCCAAGCAGCTGCTGCCCC...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGCAGCCTCGTCTTCCTaGACGCCGGGGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGAASSS*TPGSSG
Trigger: CCCAGAGCTCCCCGGCGTCCAGGAAGACGAGGCTGC...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCCACAGGGCACTTCCATaGCGGGCCCCTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPHRALP*RAPFSG
Trigger: TCCTGAGAAAGGGGCCCGTCATGGAAGTGCCCTGTG...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTTGGCCCAACGACAGTaGGAGTGGGAGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPLAQRQ*EWEDGP
Trigger: AGGCCCATCCTCCCACTCTCACTGTCGTTGGGCCAA...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCTCCAGGGGCAGCAGCTaGTTGGCTGGTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGSRGSS*LAGPPW
Trigger: CCAGGGAGGACCAGCCAAGCAGCTGCTGCCCCTGGA...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTCCAGGGGCAGCAGCTaGTTGGCTGGTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPSRGSS*LAGPPW
Trigger: CCAGGGAGGACCAGCCAAGCAGCTGCTGCCCCTGGA...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTCTGGGGTTCCCGCCGTaGTGGACAGCTGAGCGTCGT +
Preference number: 4 (lower is better)
Translates to: EDGPQTSPPNSRECPAVPLGFPP*WTAERR
Trigger: ACGACGCTCAGCTGTCCAGCACGGCGGGAACCCCAG...AGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGCTGGGGTTCCCGCCGTaGTGGACAGCTGAGCGTCGT +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWLGFPP*WTAERR
Trigger: ACGACGCTCAGCTGTCCAGCACGGCGGGAACCCCAG...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACCTCGGGGGCCATGAATaGTGGGGTTCCCGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADLGGHE*WGSRRA
Trigger: AGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAG...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTGTCCCATGGAGGGGCTaGGTGAGCTCCTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPVPWRG*VSSSSL
Trigger: CAGGGATGAGGAGCTCACGCAGCCCCTCCATGGGAC...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCGGAGCCCTCGGCCAATaGGGGTTCCTCTCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGGALGQ*GFLSRG
Trigger: ACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGTGCGGGGGCGGCTGTTaGATGAGGGGTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRCGGGC*MRGGPL
Trigger: CAGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCA...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGCAGCTGAGCCAGGCCTaGCCGGCCCCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWQLSQA*PAPAGG
Trigger: ACCTCCCGCTGGGGCCGGGCAGGCCTGGCTCAGCTG...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCGCCTTGTTGGGAACCTaGGCGCCGGGCGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGALLGT*APGDSV
Trigger: GACACTGTCGCCCGGCGCCCAGGTTCCCAACAAGGC...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTTCTGCCCGAGGATCCTaGCAGCAGACAGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPSARGS*QQTAGP
Trigger: GGGTCCAGCTGTCTGCTGCCAGGATCCTCGGGCAGA...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGGGTGGGACTCGATGGTaGGCCTCCGCCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWGGTRW*ASARPG
Trigger: CCCGGGCCTGGCGGAGGCCCACCATCGAGTCCCACC...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCCGTGGTGGGACTCGATaGTGGGCCTCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIRGGTR*WASARP
Trigger: GGGCCTGGCGGAGGCCCACCATCGAGTCCCACCACG...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGCAGCAGCTGCTTGGCTaGTCCTCCCTGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWQQLLG*SSLGSL
Trigger: CAGGCTGCCCAGGGAGGACCAGCCAAGCAGCTGCTG...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGGGGGCAGCAGCTGCTTaGCTGGTCCTCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRGAAAA*LVLPGQ
Trigger: CTGCCCAGGGAGGACCAGCCAAGCAGCTGCTGCCCC...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGGGTTCCCGCCGTGCTaGACAGCTGAGCGTCGTTCC +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGGFPPC*TAERRS
Trigger: GGAACGACGCTCAGCTGTCCAGCACGGCGGGAACCC...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTGTGAGAGTGGGAGGATaGGCCTCAGACCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: REPSANAGSSPVVHRPACVRVGG*ASDLPT
Trigger: GGTGGGGAGGTCTGAGGCCCATCCTCCCACTCTCAC...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCCTGTTGCATGAGGGGTaGGCCTCTGGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPLLHEG*ASGGAG
Trigger: TCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACAG...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTCCAAGGCCTTCCCACTaGAGCTCTGGCCGGAATCAG +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPPRPSH*SSGRNQ
Trigger: CTGATTCCGGCCAGAGCTTCAGTGGGAAGGCCTTGG...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTCATGGAGGGGCTGCGTaGGCTCCTCATCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPHGGAA*APHPWK
Trigger: CTTCCAGGGATGAGGAGCTCACGCAGCCCCTCCATG...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp GAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTCCTCCTAGGAGGTGGTaGACCCACAGGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EDGPQTSPPNSRECPAVPPPRRW*THRRGS
Trigger: TGAGCCACGCCTGTGGGTTCACCACCTCCTAGGAGG...AGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCTCTGGAGGCGCGGGATaGGTGTGCTGCCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVSGGAG*VCCRVA
Trigger: GGCCACCCGGCAGCACACTCATCCCGCGCCTCCAGA...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTAAACCTCTGCCAGGCTaGCAAGGGCTGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EDGPQTSPPNSRECPAVPKPLPG*QGLRGP
Trigger: TGGCCCCCTCAGCCCTTGGCAGCCTGGCAGAGGTTT...AGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACGTCCCTGGACGTGCGTaGGTGGAGGTCATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADVPGRA*VEVMQH
Trigger: GTGCTGCATGACCTCCACGCACGCACGTCCAGGGAC...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCCCACAGGCGCGGAGATaGAGCGGGATCCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPPQARR*SGIRVS
Trigger: AGAAACCCGGATCCCGCTGCATCTCCGCGCCTGTGG...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCAGCTTCGGGCCACACTaGCTTAGCCCAGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPSFGPH*LSPEEP
Trigger: CGGCTCCTCTGGGCTAAGGCAGTGTGGCCCGAAGCT...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTTCTGCCCGAGGATCCTaGCAGCAGACAGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGSARGS*QQTAGP
Trigger: GGGTCCAGCTGTCTGCTGCCAGGATCCTCGGGCAGA...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTAGCGCGCAGCCCACGTaGATCCACTGTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPSAQPT*IHCLAA
Trigger: AGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCT...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCGCCAACACCGAGACCTaGCCAAGTCCCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGANTET*PSPQAL
Trigger: CAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGC...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTCGAGGCGCACAGGCTTaGGGAGCTGCTTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPRGAQA*GAAFLD
Trigger: GTCCAGAAAAGCAGCTCCCCAAGCCTGTGCGCCTCG...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGGCTCTTGGGCCCAGATaGGTAGGCCGGTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWALGPR*VGRCRR
Trigger: CCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGC...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACCCAAGGCCTTCCCACTaGAGCTCTGGCCGGAATCAG +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADPRPSH*SSGRNQ
Trigger: CTGATTCCGGCCAGAGCTTCAGTGGGAAGGCCTTGG...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCTCGGCGATCTTCACGTaGCCATCATCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGSAIFT*PSSPRS
Trigger: GCTCCTGGGGGATGATGGGCACGTGAAGATCGCCGA...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTTCCACCACGCTGCAGTaGTCCTCCTCCGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPSTTLQ*SSSEGR
Trigger: CCTTCCTTCGGAGGAGGAGCACTGCAGCGTGGTGGA...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGTCCACCACGCTGCAGTaGTCCTCCTCCGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWSTTLQ*SSSEGR
Trigger: CCTTCCTTCGGAGGAGGAGCACTGCAGCGTGGTGGA...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCCCTTGGGGACAGAGATaGAAATGGGGCCAACACCGA +
Preference number: 4 (lower is better)
Translates to: EPSANAGSSPVVHRPACPPWGQR*KWGQHR
Trigger: TCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGG...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGGTCTGTCCCTGGACGTaGGTGCGTGGAGGTCATGCA +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWVCPWT*VRGGHA
Trigger: TGCATGACCTCCACGCACGCACGTCCAGGGACAGAC...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGCAGCTGAGCCAGGCCTaGCCGGCCCCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQQLSQA*PAPAGG
Trigger: ACCTCCCGCTGGGGCCGGGCAGGCCTGGCTCAGCTG...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTCATTCGGTCAGCAAATaGCACGTCGGCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGHSVSK*HVGQPD
Trigger: GTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATG...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCTCTGAGATGGCCACGTaGTGGGACTCGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGSEMAT*WDSMVG
Trigger: GCCCACCATCGAGTCCCACCACGTGGCCATCTCAGA...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGTCTGAGATGGCCACGTaGTGGGACTCGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWSEMAT*WDSMVG
Trigger: GCCCACCATCGAGTCCCACCACGTGGCCATCTCAGA...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTCCTCCCTGGGCAGCCTaGGACCCTCTCGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASPPWAA*DPLGGG
Trigger: CCCTCCCCCGAGAGGGTCCCAGGCTGCCCAGGGAGG...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGGGGGCAGCAGCTGCTTaGCTGGTCCTCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWGAAAA*LVLPGQ
Trigger: CTGCCCAGGGAGGACCAGCCAAGCAGCTGCTGCCCC...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCGACGCCGGGGAGCTCTaGGCTCTTGCCCCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVDAGEL*ALAPFT
Trigger: GGTGAAGGGGGCAAGAGCCCAGAGCTCCCCGGCGTC...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGCCAAGAAGAGGAGGATaGCCTCGTGGGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRPRRGG*PRGSPA
Trigger: GGCAGGGCTCCCACGAGGCCATCCTCCTCTTCTTGG...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCCTCCACCTGCCATCTTaGTCTCCTGCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPLHLPS*SPASAS
Trigger: GGAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAG...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCGGCTGGGAGCAGTCTTaGAGTACTGCCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGGWEQS*STARDH
Trigger: GTGATCCCTGGCAGTACTTCAAGACTGCTCCCAGCC...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCGGACCTCGATCAGTTTaGCCACATTCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GALGQCGFLSRGPPASLSGPRSV*PHSRGP
Trigger: TGGACCACGTGAATGTGGTCAAACTGATCGAGGTCC...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTTGGCCTCGGGGGCCATaGATGCTGGGGTTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASWPRGP*MLGFPP
Trigger: CGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCA...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGCCACGGGCTCATTCTTaGTCTTCCTGTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWPRAHS*SSCGGP
Trigger: TGGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGG...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCGGGGATGAGCCTGACTaGGTTCTTAACCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGWASDLPTQLQGVPGSPGDEPD*VLNLLL
Trigger: GAGGAGGAGGTTAAGAACTCAGTCAGGCTCATCCCC...GGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGGGGGCGGCTGTTGCATaGGGGGTGGGCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKGAAVA*GVGLWR
Trigger: CCTCCAGAGGCCCACCCCTCATGCAACAGCCGCCCC...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAATGTCCGAGTCCTGCGTaGCCCTGTGGGGGTCAACCT +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKCPSPA*PCGGQP
Trigger: AGGTTGACCCCCACAGGGTCACGCAGGACTCGGACA...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTGGCCCACCAGTACTCTGGGCCACCATCTaGCTCCTCCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QTSPPNSRECPAVPGPPVLWATI*LLQVSH
Trigger: GTGACTCACTTGGAGGAGGCAGATGGTGGCCCAGAG...TACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCGCAGTCTTGAAGTACTaGCAGGGATCACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GALGQCGFLSRGPPASLSAVLKY*QGSQRQ
Trigger: CTGCCTCTGTGATCCCTGGCAGTACTTCAAGACTGC...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCACCGTAGGCACCCTTaGCAATCTCACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: REPSANAGSSPVVHRPACHRRHP*QSHSAA
Trigger: AGCTGCAGAGTGAGATTGGCAAGGGTGCCTACGGTG...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGTCCAGGGGCAGCAGCTaGTTGGCTGGTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWSRGSS*LAGPPW
Trigger: CCAGGGAGGACCAGCCAAGCAGCTGCTGCCCCTGGA...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTACGATCTTCTGGCAGTaGAAGTACTCGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPTIFWQ*KYSRPR
Trigger: CCTGGGCCTCGAGTACTTGCACTGCCAGAAGATCGT...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACTCGCTCTTCCCTCCGTaGTTGGGGCTCAAACGGGTT +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADSLFPP*LGLKRV
Trigger: AACCCGTTTGAGCCCCAAGCACGGAGGGAAGAGCGA...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACCTTGGGGACAGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCCCCAACTCCAGGGAGTaGCCGGCAGTCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TLGTEMQMGPTPRPGQVPPNSRE*PAVPGP
Trigger: TGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGG...GGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGGT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGAGCCTGGCCTCCACCTaGCATCTTGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRSLAST*HLGLLP
Trigger: AGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCT...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGGCCGCAGAGGCCACCTaGCAGCGTGCACACCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLAAEAT*QRAHPS
Trigger: GGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGC...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGGCCGCAGAGGCCACCTaGCAGCGTGCACACCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKAAEAT*QRAHPS
Trigger: GGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGC...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAAGCAGTGTCCGAGTCCTaGGTGACCCTGTGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKAVSES*VTLWGS
Trigger: TGACCCCCACAGGGTCACGCAGGACTCGGACACTGC...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAACCACAGGCGCGGAGATaGAGCGGGATCCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKPQARR*SGIRVS
Trigger: AGAAACCCGGATCCCGCTGCATCTCCGCGCCTGTGG...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCAGCTCTGGCCCGTGGTaGGGGGTCCACACCGTTTCT +
Preference number: 4 (lower is better)
Translates to: RRGHLPACTPLQVLCLVISSGPW*GVHTVS
Trigger: AGAAACGGTGTGGACCCCCCACCACGGGCCAGAGCT...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGGGCTGGCAGGCCCCGTaGCATAAGGCCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLGWQAP*HKAQPA
Trigger: CGCAGGCTGGGCCTTATGCCACGGGGCCTGCCAGCC...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCGTGGTGGGACTCGATaGTGGGCCTCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVRGGTR*WASARP
Trigger: GGGCCTGGCGGAGGCCCACCATCGAGTCCCACCACG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCCCTCTGCATCTGAGATaGCCACGTGGTGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPPLHLR*PRGGTR
Trigger: TCGAGTCCCACCACGTGGCCATCTCAGATGCAGAGG...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCGGGTTCCCGCCGTGCTaGACAGCTGAGCGTCGTTCC +
Preference number: 4 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVGFPPC*TAERRS
Trigger: GGAACGACGCTCAGCTGTCCAGCACGGCGGGAACCC...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCGGGGGCCATGAATGCTaGGGTTCCCGCCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVGGHEC*GSRRAG
Trigger: TCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCC...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGTCTTCCCTCCGTGCTTaGGGCTCAAACGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWSSLRA*GSNGFP
Trigger: TGGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGA...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTCCTGCGTGACCCTGTaGGGGTCAACCTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPSCVTL*GSTSMS
Trigger: GCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGA...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGGCCGTGCTGGACAGCTaGGCGTCGTTCCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWAVLDS*ASFPSN
Trigger: GTTTGAGGGGAACGACGCTCAGCTGTCCAGCACGGC...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGGCCGGGTGGCATTTCTaGGGCTCCATGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQAGWHF*GSMGTR
Trigger: CCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGC...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTCATCAAGGGAGAGAGTaGGATGGGCAGGGACGATGT +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGHQGRE*DGQGRC
Trigger: ACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATG...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACCTTGGGGACAGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCCTCGGGGGCCATGAATaGTGGGGTTCCCGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: TLGTEMQMGPTPRPGQVPLGGHE*WGSRRA
Trigger: AGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAG...GGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCTCCTGCCCCAGGCCATaGCAACCAGCCGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVSCPRP*QPAGWH
Trigger: ATGCCACCCGGCTGGTTGGCATGGCCTGGGGCAGGA...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAAGCAGGGACGATGTGGTaGTTCCGCTTCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKAGTMW*FRFRPL
Trigger: CAGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGC...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCAGGCCACCTGCCAGCGTaGACACCCCTCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CRVHGPRSKSALVSSPASGHLPA*TPLQVL
Trigger: CAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCC...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTGGCCCACCAGTAGAGGTTGTCCTCAGCTaGGTCATCCAGGACCTCGAT +
Preference number: 4 (lower is better)
Translates to: QTSPPNSRECPAVPGPPVEVVLS*VIQDLD
Trigger: ATCGAGGTCCTGGATGACCCAGCTGAGGACAACCTC...TACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCTGTGGACGATCTTCTaGCAGTGCAAGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: REPSANAGSSPVVHRPACLWTIF*QCKYSR
Trigger: CCTCGAGTACTTGCACTGCCAGAAGATCGTCCACAG...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGGGGTTCCCGCCGTGCTaGACAGCTGAGCGTCGTTCC +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQGFPPC*TAERRS
Trigger: GGAACGACGCTCAGCTGTCCAGCACGGCGGGAACCC...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGGGGGGCCATGAATGCTaGGGTTCCCGCCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQGGHEC*GSRRAG
Trigger: TCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCC...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTTTCCCACTGAAGCTCTaGCCGGAATCAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: REPSANAGSSPVVHRPACFPLKL*PESEMA
Trigger: GGCCATTTCTGATTCCGGCCAGAGCTTCAGTGGGAA...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTGCAGCCTCGTCTTCCTaGACGCCGGGGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASAASSS*TPGSSG
Trigger: CCCAGAGCTCCCCGGCGTCCAGGAAGACGAGGCTGC...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGGCTCTTGGGCCCAGATaGGTAGGCCGGTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWALGPR*VGRCRR
Trigger: CCTCCTACACCGGCCTACCCATCTGGGCCCAAGAGC...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGGCCGTGCTGGACAGCTaGGCGTCGTTCCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQAVLDS*ASFPSN
Trigger: GTTTGAGGGGAACGACGCTCAGCTGTCCAGCACGGC...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGCCAAGGCCTTCCCACTaGAGCTCTGGCCGGAATCAG +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWPRPSH*SSGRNQ
Trigger: CTGATTCCGGCCAGAGCTTCAGTGGGAAGGCCTTGG...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACCAAAGCAGTACAACGTaGCGCCAGTGGCCCATACAT +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADQSSTT*RQWPIH
Trigger: ATGTATGGGCCACTGGCGTCACGTTGTACTGCTTTG...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGACCCAGTGAGAGAGTaGCATCAAGCTGCATGGAAG +
Preference number: 4 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPDPVRE*HQAAWK
Trigger: CTTCCATGCAGCTTGATGTCACTCTCTCACTGGGTC...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGCTGATGTCCTCAGGGTaGGGCAATTGCCGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWLMSSG*GNCRRG
Trigger: GCCTCTGCGGCAATTGCCTCACCCTGAGGACATCAG...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGAAACGTGGACCCACTaGCAATGGGGCACATTCGGC +
Preference number: 4 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRETWTH*QWGTFG
Trigger: GCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTC...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCCCCTCAGTGACAGGGTaGGCATCCCACCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVPSVTG*ASHLGL
Trigger: TAGGCCCAGGTGGGATGCTCACCCTGTCACTGAGGG...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACGCAGTCTTGAAGTACTaGCAGGGATCACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADAVLKY*QGSQRQ
Trigger: CTGCCTCTGTGATCCCTGGCAGTACTTCAAGACTGC...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCTTGCCAATCTCACTCTaGAGCTTGTACTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GALGQCGFLSRGPPASLSLPISL*SLYWFS
Trigger: GCTGAACCAGTACAAGCTGCAGAGTGAGATTGGCAA...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCCGGGTGGCCCTGGGTaGATGCAGGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLPGGPG*MQGLRM
Trigger: CATCCTGAGCCCCTGCATGCACCCAGGGCCACCCGG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTTCCTGCCCCAGGCCATaGCAACCAGCCGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASSCPRP*QPAGWH
Trigger: ATGCCACCCGGCTGGTTGGCATGGCCTGGGGCAGGA...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGGCAGGGACGATGTGGTaGTTCCGCTTCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWAGTMW*FRFRPL
Trigger: CAGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGC...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGGGCCACCTGCCAGCGTaGACACCCCTCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLGHLPA*TPLQVL
Trigger: CAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCC...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGCGGAAGAGCTGTGTCTaGACGCGCTCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKRKSCV*TRSSTP
Trigger: GGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCG...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGCATTCGGTCAGCAAATaGCACGTCGGCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRHSVSK*HVGQPD
Trigger: GTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATG...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCGCAGTGTCCGAGTCCTaGGTGACCCTGTGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVAVSES*VTLWGS
Trigger: TGACCCCCACAGGGTCACGCAGGACTCGGACACTGC...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGTTGGGAACTCTCCACTaGAGCCACACCACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRLGTLH*SHTTAS
Trigger: GGAAGCTGTGGTGTGGCTGCAGTGGAGAGTTCCCAA...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGGCCTTGTTGGGAACCTaGGCGCCGGGCGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKALLGT*APGDSV
Trigger: GACACTGTCGCCCGGCGCCCAGGTTCCCAACAAGGC...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348335.7
CDS-3UTR CCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGAGTGAGTCACATCGATaGCTGCCACCCGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWSESHR*LPPVLP
Trigger: TGGTAGAACGGGTGGCAGCCATCGATGTGACTCACT...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCTTGGCTGGTCCTCCCTaGGCAGCCTGGGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVLAGPP*AAWDPL
Trigger: GAGAGGGTCCCAGGCTGCCCAGGGAGGACCAGCCAA...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCCTCCTCGCTGATTTCTaGCTCCTCAGGAAACACCAC +
Preference number: 4 (lower is better)
Translates to: HAQGHRPVASMALGQSQPLLADF*LLRKHH
Trigger: GTGGTGTTTCCTGAGGAGCCAGAAATCAGCGAGGAG...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTGTGCAACTTGATGTCTaGCACCCCAATTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: REPSANAGSSPVVHRPACVQLDV*HPNSRL
Trigger: GAGACGAGAATTGGGGTGCCAGACATCAAGTTGCAC...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGAGACGCCGGGGAGCTCTaGGCTCTTGCCCCCTTCACC +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARDAGEL*ALAPFT
Trigger: GGTGAAGGGGGCAAGAGCCCAGAGCTCCCCGGCGTC...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGGTTTCCCCACAGAATaGGTCAGGCCAAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRGFPTE*VRPRRS
Trigger: GGACCTCCTTGGCCTGACCCATTCTGTGGGGAAACC...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTGATCCCTCCGACCTaGACAGTTTGTCCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGVIPPT*TVCPSL
Trigger: CAACGAAGGACAAACTGTCCAGGTCGGAGGGATCAC...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCCACAGGGCACTTCCATaGCGGGCCCCTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVHRALP*RAPFSG
Trigger: TCCTGAGAAAGGGGCCCGTCATGGAAGTGCCCTGTG...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTCCTCAAACTGGTTGCTaGCGCCAAAGTCGGCGATCT +
Preference number: 4 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRPQTGC*RQSRRS
Trigger: AGATCGCCGACTTTGGCGTCAGCAACCAGTTTGAGG...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACCTTGGGGACAGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCTGCTGGCCCCAGGAATaGAGCAAGAGCTGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: TLGTEMQMGPTPRPGQVPCWPQE*SKSWAQ
Trigger: TTGGGCCCAGCTCTTGCTTCATTCCTGGGGCCAGCA...GGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGAGAAGGTGGATCTGCTaGGGACGAGGCGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQRRWIC*GRGAQA
Trigger: AGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCT...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTTTCGTTGTAGGAGTGTaGGTGCAGCTCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRFVVGV*VQLLGP
Trigger: TGGGCCCAAGAGCTGCACTCACACTCCTACAACGAA...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCACCGTTCTACCAGCTCTaGCCGAGGATCCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CRVHGPRSKSALVSSPASPFYQL*PRILAA
Trigger: TGCTGCCAGGATCCTCGGGCAGAGCTGGTAGAACGG...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGCCGTTCTACCAGCTCTaGCCGAGGATCCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGPFYQL*PRILAA
Trigger: TGCTGCCAGGATCCTCGGGCAGAGCTGGTAGAACGG...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAAACGATCTTCTGGCAGTaGAAGTACTCGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKTIFWQ*KYSRPR
Trigger: CCTGGGCCTCGAGTACTTGCACTGCCAGAAGATCGT...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCTGGGGTTCCCGCCGTaGTGGACAGCTGAGCGTCGT +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLLGFPP*WTAERR
Trigger: ACGACGCTCAGCTGTCCAGCACGGCGGGAACCCCAG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGTCGCTCTTCCCTCCGTaGTTGGGGCTCAAACGGGTT +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWSLFPP*LGLKRV
Trigger: AACCCGTTTGAGCCCCAAGCACGGAGGGAAGAGCGA...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGGGAGCTCTGGGCTCTTaGCCCCTTCACCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWGALGS*PLHQTL
Trigger: AAGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCC...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCGTCCCTGGACGTGCGTaGGTGGAGGTCATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVVPGRA*VEVMQH
Trigger: GTGCTGCATGACCTCCACGCACGCACGTCCAGGGAC...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACGGAAGAGCTGTGTCTaGACGCGCTCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARRKSCV*TRSSTP
Trigger: GGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGGATGAGCACGCGACATaGACCCACAGGCGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWDEHAT*THRRGD
Trigger: ATCTCCGCGCCTGTGGGTGCATGTCGCGTGCTCATC...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGAGCTTCGGGCCACACTaGCTTAGCCCAGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQSFGPH*LSPEEP
Trigger: CGGCTCCTCTGGGCTAAGGCAGTGTGGCCCGAAGCT...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGTCTGCCCGAGGATCCTaGCAGCAGACAGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKSARGS*QQTAGP
Trigger: GGGTCCAGCTGTCTGCTGCCAGGATCCTCGGGCAGA...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGGAGATGGCCACGTGGTaGGACTCGATGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLEMATW*DSMVGL
Trigger: GAGGCCCACCATCGAGTCCCACCACGTGGCCATCTC...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGTCGTTCCCCTCAAACTaGTTGCTGACGCCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRSFPSN*LLTPKS
Trigger: CGACTTTGGCGTCAGCAACCAGTTTGAGGGGAACGA...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCGGTCTTCCTGTCCCATaGAGGGGCTGCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFGLPVP*RGCVSS
Trigger: GGAGCTCACGCAGCCCCTCCATGGGACAGGAAGACC...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGGTCATGCAGCACGATaGGGGAGGGGCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQGHAAR*GRGGSG
Trigger: CCCACTCCCGCCCCTCCCCCATCGTGCTGCATGACC...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGGGCCTGTCGCGTCCATaGCCCTCGGTCAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQGLSRP*PSVKVS
Trigger: GCTGACTTTGACCGAGGGCCATGGACGCGACAGGCC...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTGGCCTGTCGCGTCCATaGCCCTCGGTCAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASGLSRP*PSVKVS
Trigger: GCTGACTTTGACCGAGGGCCATGGACGCGACAGGCC...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCCTGCGTGACCCTGTaGGGGTCAACCTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWSCVTL*GSTSMS
Trigger: GCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGA...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGGCTGGGAGCAGTCTTaGAGTACTGCCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGGWEQS*STARDH
Trigger: GTGATCCCTGGCAGTACTTCAAGACTGCTCCCAGCC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCTGGCCTCGGGGGCCATaGATGCTGGGGTTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRWPRGP*MLGFPP
Trigger: CGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCA...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCCAAAGCAGTACAACGTaGCGCCAGTGGCCCATACAT +
Preference number: 4 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIQSSTT*RQWPIH
Trigger: ATGTATGGGCCACTGGCGTCACGTTGTACTGCTTTG...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGCCACGGGCTCATTCTTaGTCTTCCTGTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQPRAHS*SSCGGP
Trigger: TGGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGG...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCAGGTTCTGTGTCTCGTaGTCCCTCCGACCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVRFCVS*SLRPGQ
Trigger: CTGTCCAGGTCGGAGGGATCACGAGACACAGAACCT...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCGAGCAGGCTGACTGCTaGTGTCCTCAGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVEQADC*CPQGEA
Trigger: TGCCTCACCCTGAGGACATCAGCAGTCAGCCTGCTC...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGGAGCAGGCTGACTGCTaGTGTCCTCAGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKEQADC*CPQGEA
Trigger: TGCCTCACCCTGAGGACATCAGCAGTCAGCCTGCTC...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCGGCCAGCCGGACACTaGTCCCAGAGAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVRPAGH*SQREGE
Trigger: TTCACCTTCTCTCTGGGATCAGTGTCCGGCTGGCCG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGCTGTGTGCAACAGATaGGCACGCGACATGCACCCA +
Preference number: 4 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGAVCNR*ARDMHP
Trigger: TGGGTGCATGTCGCGTGCTCATCTGTTGCACACAGC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGACACTTGGGGATCAGTaGTTGGCTCTTAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWTLGDQ*LALNLP
Trigger: AGGCAAGTTAAGAGCCAATCACTGATCCCCAAGTGT...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCCCTCAGTGACAGGGTaGGCATCCCACCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLPSVTG*ASHLGL
Trigger: TAGGCCCAGGTGGGATGCTCACCCTGTCACTGAGGG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTTTGCCAATCTCACTCTaGAGCTTGTACTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGLPISL*SLYWFS
Trigger: GCTGAACCAGTACAAGCTGCAGAGTGAGATTGGCAA...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGCACCGTAGGCACCCTTaGCAATCTCACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRHRRHP*QSHSAA
Trigger: AGCTGCAGAGTGAGATTGGCAAGGGTGCCTACGGTG...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGTCGGCGATCTTCACGTaGCCATCATCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQSAIFT*PSSPRS
Trigger: GCTCCTGGGGGATGATGGGCACGTGAAGATCGCCGA...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTTCCACCACGCTGCAGTaGTCCTCCTCCGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASSTTLQ*SSSEGR
Trigger: CCTTCCTTCGGAGGAGGAGCACTGCAGCGTGGTGGA...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTAGAGTGACATCAAGCTaGATGGAAGAAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EDGPQTSPPNSRECPAVPRVTSS*MEEGSS
Trigger: GGAAGACCCTTCTTCCATGCAGCTTGATGTCACTCT...AGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCAGACAAGAGCTCTGGTaGCACCACCCCAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVRQELW*HHPKVG
Trigger: GCCCACCTTGGGGTGGTGGCACCAGAGCTCTTGTCT...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGCCTCTGCATCTGAGATaGCCACGTGGTGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQPLHLR*PRGGTR
Trigger: TCGAGTCCCACCACGTGGCCATCTCAGATGCAGAGG...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTCGGGGGAGGGCGACGTaGAAAGCCATACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASRGRAT*KAILLQ
Trigger: CTGAAGCAGTATGGCTTTCCACGTCGCCCTCCCCCG...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGACCTCCCTGGGCAGCCTaGGACCCTCTCGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRPPWAA*DPLGGG
Trigger: CCCTCCCCCGAGAGGGTCCCAGGCTGCCCAGGGAGG...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGTTGGCTGGTCCTCCCTaGGCAGCCTGGGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWLAGPP*AAWDPL
Trigger: GAGAGGGTCCCAGGCTGCCCAGGGAGGACCAGCCAA...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGCAGGGAGTGGGGCTTaGCGATATTTGTTGAATCTA +
Preference number: 4 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPAGSGA*RYLLNL
Trigger: TAGATTCAACAAATATCGCCAAGCCCCACTCCCTGC...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTTTCTTGATCTTCCTGTaGAGGGCCAGGATGAAATCG +
Preference number: 4 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGFLIFL*RARMKS
Trigger: CGATTTCATCCTGGCCCTCCACAGGAAGATCAAGAA...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTAACGCTTCCTCAGCATaGACTTCACCAGGATCACCG +
Preference number: 4 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRNASSA*TSPGSP
Trigger: CGGTGATCCTGGTGAAGTCCATGCTGAGGAAGCGTT...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCTCTTCCCTCCGTGCTTaGGGCTCAAACGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVSSLRA*GSNGFP
Trigger: TGGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGA...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGCTGTTGCATGAGGGGTaGGCCTCTGGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWLLHEG*ASGGAG
Trigger: TCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACAG...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCATTCCAGTCTGTCCCTaGACGTGCGTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVIPVCP*TCVRGG
Trigger: ACCTCCACGCACGCACGTCCAGGGACAGACTGGAAT...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACCAAGAAGAGGAGGATaGCCTCGTGGGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARPRRGG*PRGSPA
Trigger: GGCAGGGCTCCCACGAGGCCATCCTCCTCTTCTTGG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGCTCCACCTGCCATCTTaGTCTCCTGCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKLHLPS*SPASAS
Trigger: GGAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAG...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGTGGGCAGGGACGATGTaGTGCTTCCGCTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQWAGTM*CFRFRP
Trigger: AGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCA...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTTGTGAGTGCAGCTCTTaGGCCCAGATGGGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASCECSS*AQMGRP
Trigger: CGGCCTACCCATCTGGGCCCAAGAGCTGCACTCACA...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGCAGGTTGGATGGCTTaGTGTCCCTGTGGACGATCT +
Preference number: 4 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGAGWMA*CPCGRS
Trigger: AGATCGTCCACAGGGACATCAAGCCATCCAACCTGC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGCCTCAAACTGGTTGCTaGCGCCAAAGTCGGCGATCT +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQPQTGC*RQSRRS
Trigger: AGATCGCCGACTTTGGCGTCAGCAACCAGTTTGAGG...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGGCCGTGCTGGACAGCTaGGCGTCGTTCCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWAVLDS*ASFPSN
Trigger: GTTTGAGGGGAACGACGCTCAGCTGTCCAGCACGGC...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCAGGGGATGAGCCTGACTaGGTTCTTAACCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CRVHGPRSKSALVSSPASGDEPD*VLNLLL
Trigger: GAGGAGGAGGTTAAGAACTCAGTCAGGCTCATCCCC...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCATTCGTTGTAGGAGTGTaGGTGCAGCTCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRVHGPRSKSALVSSPASFVVGV*VQLLGP
Trigger: TGGGCCCAAGAGCTGCACTCACACTCCTACAACGAA...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGATCCCAGAGAGAAGGTaGAGGCTGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKIPERR*RLLRKS
Trigger: GCTCTTCCGGAGCAGCCTTCACCTTCTCTCTGGGAT...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGGCTGTGTGCAACAGATaGGCACGCGACATGCACCCA +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLAVCNR*ARDMHP
Trigger: TGGGTGCATGTCGCGTGCTCATCTGTTGCACACAGC...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGGAAACGTGGACCCACTaGCAATGGGGCACATTCGGC +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQETWTH*QWGTFG
Trigger: GCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTC...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGAACCAAAACCCTCAGTaGCAGGGTGAGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWNQNPQ*QGEHPT
Trigger: GGTGGGATGCTCACCCTGTCACTGAGGGTTTTGGTT...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACCTTGGGGACAGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCCGGCCAGCCTGTCCCTaGTTACTCACTGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: TLGTEMQMGPTPRPGQVPRPACP*LLTEQA
Trigger: TGCTTGTTCAGTGAGTAAGCAGGGACAGGCTGGCCG...GGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCCCCTCTCCACCATATaGCTGTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLPLSTI*LWQLSQ
Trigger: CTGGCTCAGCTGCCACAGGCATATGGTGGAGAGGGG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGCCAGTTATTTCAGCATaGGCAGGGCCACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGPVISA*AGPQAC
Trigger: ACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGG...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGGGCTGGCAGGCCCCGTaGCATAAGGCCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDEGWQAP*HKAQPA
Trigger: CGCAGGCTGGGCCTTATGCCACGGGGCCTGCCAGCC...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGCCTCTGCATCTGAGATaGCCACGTGGTGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLPLHLR*PRGGTR
Trigger: TCGAGTCCCACCACGTGGCCATCTCAGATGCAGAGG...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCGAGGTTGTCCTCAGCTaGGTCATCCAGGACCTCGAT +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVEVVLS*VIQDLD
Trigger: ATCGAGGTCCTGGATGACCCAGCTGAGGACAACCTC...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCAGGCTCTGGCCGAGGGAAGCAGGGAGTaGGGCTTGGCGATATTTGTT +
Preference number: 4 (lower is better)
Translates to: RDANGANTETWPSPQALAEGSRE*GLAIFV
Trigger: AACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTC...GGCCAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGCAGGAGCAGGTTGGATaGCTTGATGTCCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQQEQVG*LDVPVD
Trigger: GTCCACAGGGACATCAAGCCATCCAACCTGCTCCTG...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCTCTTCCCTCCGTGCTTaGGGCTCAAACGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFSSLRA*GSNGFP
Trigger: TGGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGA...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACCTTGGGGACAGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLGTEMQMGPTPRPGQVPFLEQT*IALPSV
Trigger: CACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAA...GGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACTGCTCAAGAAACACTTaGGGATCAGTGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADCSRNT*GSVIGS
Trigger: AGAGCCAATCACTGATCCCCAAGTGTTTCTTGAGCA...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCGGAAAGCTTCCTGGCTaGGAGGCTAGGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRGKLPG*EARPGW
Trigger: CCAGCCCGGCCTAGCCTCTCAGCCAGGAAGCTTTCC...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGCACAGGGCACTTCCATaGCGGGCCCCTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWHRALP*RAPFSG
Trigger: TCCTGAGAAAGGGGCCCGTCATGGAAGTGCCCTGTG...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGCCTCAAACTGGTTGCTaGCGCCAAAGTCGGCGATCT +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLPQTGC*RQSRRS
Trigger: AGATCGCCGACTTTGGCGTCAGCAACCAGTTTGAGG...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGCCCCATACCAGCGTCTaGATAGACAAGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWPHTSV*IDKSSG
Trigger: ACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGG...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCATCAAGGGAGAGAGTaGGATGGGCAGGGACGATGT +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVHQGRE*DGQGRC
Trigger: ACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGAGGTTCTGTGTCTCGTaGTCCCTCCGACCTGGACAG +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLRFCVS*SLRPGQ
Trigger: CTGTCCAGGTCGGAGGGATCACGAGACACAGAACCT...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGAACCAAAACCCTCAGTaGCAGGGTGAGCATCCCACC +
Preference number: 4 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLNQNPQ*QGEHPT
Trigger: GGTGGGATGCTCACCCTGTCACTGAGGGTTTTGGTT...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCAGTCACATCGATGGCTaGCACCCGTTCTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFSHIDG*HPFYQL
Trigger: GAGCTGGTAGAACGGGTGGCAGCCATCGATGTGACT...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CGGTGTAGGAGGAGAGGCTGGGTTCCAGTTATTTCAGCATGCGCAGGGCCACAGAGTCACATCGATGGCTaGCACCCGTTCTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: RCRRRGWVPVISACAGPQSHIDG*HPFYQL
Trigger: GAGCTGGTAGAACGGGTGGCAGCCATCGATGTGACT...CTGTGGCCCTGCGCATGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACTCTGGGCCACCATCTaGCTCCTCCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARLWATI*LLQVSH
Trigger: GTGACTCACTTGGAGGAGGCAGATGGTGGCCCAGAG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGGCAGTCTTGAAGTACTaGCAGGGATCACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWAVLKY*QGSQRQ
Trigger: CTGCCTCTGTGATCCCTGGCAGTACTTCAAGACTGC...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCTTGTACTGGTTCAGCTaGACGCAGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVLYWFS*TQSSAS
Trigger: AGATGCAGAGGACTGCGTGCAGCTGAACCAGTACAA...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTACGATCTTCTGGCAGTaGAAGTACTCGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASTIFWQ*KYSRPR
Trigger: CCTGGGCCTCGAGTACTTGCACTGCCAGAAGATCGT...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCCAGTTATTTCAGCATaGGCAGGGCCACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVPVISA*AGPQAC
Trigger: ACAGGCCTGTGGCCCTGCGCATGCTGAAATAACTGG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGGATGAGCACGCGACATaGACCCACAGGCGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMDEHAT*THRRGD
Trigger: ATCTCCGCGCCTGTGGGTGCATGTCGCGTGCTCATC...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCAAGGGGGTTCTTCTaGGTAGCCTTGTTGGGAACT +
Preference number: 4 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWSRGFF*VALLGT
Trigger: AGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGA...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS-3UTR CCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCGTTTCTAGTAGGCTCTaGGCCACCATCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFVSSRL*ATICLL
Trigger: GAGGAGGCAGATGGTGGCCCAGAGCCTACTAGAAAC...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCCTCTGCAGCTTGTACTaGTTCAGCTGCACGCAGTCC +
Preference number: 4 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFLCSLY*FSCTQS
Trigger: GGACTGCGTGCAGCTGAACCAGTACAAGCTGCAGAG...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGCTCTGCAGCTTGTACTaGTTCAGCTGCACGCAGTCC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKLCSLY*FSCTQS
Trigger: GGACTGCGTGCAGCTGAACCAGTACAAGCTGCAGAG...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTCTCTGCAGCTTGTACTaGTTCAGCTGCACGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASLCSLY*FSCTQS
Trigger: GGACTGCGTGCAGCTGAACCAGTACAAGCTGCAGAG...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCCTGTGGACGATCTTCTaGCAGTGCAAGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVLWTIF*QCKYSR
Trigger: CCTCGAGTACTTGCACTGCCAGAAGATCGTCCACAG...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGCAGGAGCAGGTTGGATaGCTTGATGTCCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKQEQVG*LDVPVD
Trigger: GTCCACAGGGACATCAAGCCATCCAACCTGCTCCTG...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCATCGTTCCCCTCAAACTaGTTGCTGACGCCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: CRVHGPRSKSALVSSPASSFPSN*LLTPKS
Trigger: CGACTTTGGCGTCAGCAACCAGTTTGAGGGGAACGA...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAATTCTTGATCTTCCTGTaGAGGGCCAGGATGAAATCG +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKFLIFL*RARMKS
Trigger: CGATTTCATCCTGGCCCTCCACAGGAAGATCAAGAA...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGCTCCTCGCTGATTTCTaGCTCCTCAGGAAACACCAC +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQLLADF*LLRKHH
Trigger: GTGGTGTTTCCTGAGGAGCCAGAAATCAGCGAGGAG...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVFLEQT*IALPSV
Trigger: CACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAA...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGCTGGACGTGCGTGCGTaGAGGTCATGCAGCACGATG +
Preference number: 4 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMLDVRA*RSCSTM
Trigger: CATCGTGCTGCATGACCTCCACGCACGCACGTCCAG...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGCTGGACGTGCGTGCGTaGAGGTCATGCAGCACGATG +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWLDVRA*RSCSTM
Trigger: CATCGTGCTGCATGACCTCCACGCACGCACGTCCAG...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGATTTCTGAGGCTCCATaGGCACCCGGTTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKISEAP*APGFPT
Trigger: TGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAAT...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGTCCACCATATGCCTGTaGCAGCTGAGCCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQSTICL*QLSQAC
Trigger: GCAGGCCTGGCTCAGCTGCCACAGGCATATGGTGGA...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCGGACACCCACACCTGTaGCCAAAAGCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVGHPHL*PKALVH
Trigger: ATGGACAAGGGCTTTTGGCCACAGGTGTGGGTGTCC...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
3UTR CAA 72 bp CTCCAACAGGACACCCACACCTGTGGCCAAAAGCCCTaGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LQQDTHTCGQKP*SIHVSRAVSES
Trigger: GGACTCGGACACTGCCCTGGAAACATGGATGGACAAGGGCTTTTGGCCACAGGTGTGGGTGTCCTGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGGGCTGGGAGCAGTCTTaGAGTACTGCCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMGWEQS*STARDH
Trigger: GTGATCCCTGGCAGTACTTCAAGACTGCTCCCAGCC...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGCCACGGGCTCATTCTTaGTCTTCCTGTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWPRAHS*SSCGGP
Trigger: TGGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGG...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTTCTGGAGGCGCGGGATaGGTGTGCTGCCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTSGGAG*VCCRVA
Trigger: GGCCACCCGGCAGCACACTCATCCCGCGCCTCCAGA...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGATCCCAGAGAGAAGGTaGAGGCTGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMIPERR*RLLRKS
Trigger: GCTCTTCCGGAGCAGCCTTCACCTTCTCTCTGGGAT...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGTTGTACTGGTTCAGCTaGACGCAGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQLYWFS*TQSSAS
Trigger: AGATGCAGAGGACTGCGTGCAGCTGAACCAGTACAA...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACACCGTAGGCACCCTTaGCAATCTCACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARHRRHP*QSHSAA
Trigger: AGCTGCAGAGTGAGATTGGCAAGGGTGCCTACGGTG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCGGAAAGGACTTTCATTaGATAGTGTCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGGKDFH*IVSVFT
Trigger: AGTGAAGACAGACACTATGCAATGAAAGTCCTTTCC...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACGGAAAGGACTTTCATTaGATAGTGTCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PEELCLHALQHPRSEQADGKDFH*IVSVFT
Trigger: AGTGAAGACAGACACTATGCAATGAAAGTCCTTTCC...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAATTCCATCCACTTGGCTaGCAAATAATCTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKFHPLG*QIILGC
Trigger: ACAGCCCAAGATTATTTGGCAGCCAAGTGGATGGAA...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTAGTGAGTCACATCGATaGCTGCCACCCGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASSESHR*LPPVLP
Trigger: TGGTAGAACGGGTGGCAGCCATCGATGTGACTCACT...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGGTTTCTAGTAGGCTCTaGGCCACCATCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLVSSRL*ATICLL
Trigger: GAGGAGGCAGATGGTGGCCCAGAGCCTACTAGAAAC...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCAGCAGCTGCTTGGCTaGTCCTCCCTGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDEQQLLG*SSLGSL
Trigger: CAGGCTGCCCAGGGAGGACCAGCCAAGCAGCTGCTG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTTTTGTTGAATCTAACTaGATATTCTGGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPFVESN*IFWAWF
Trigger: GAACCAGGCCCAGAATATCCAGTTAGATTCAACAAA...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAGGGGGCCATGAATGCTaGGGTTCCCGCCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRGGHEC*GSRRAG
Trigger: TCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCC...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGGAAATCGTCGATGAATaGGCACTTCCCATAGACAAA +
Preference number: 4 (lower is better)
Translates to: PVCPWTCVRGGHAARWGREIVDE*ALPIDK
Trigger: TTTGTCTATGGGAAGTGCCCATTCATCGACGATTTC...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTCTCCTCGCTGATTTCTaGCTCCTCAGGAAACACCAC +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASLLADF*LLRKHH
Trigger: GTGGTGTTTCCTGAGGAGCCAGAAATCAGCGAGGAG...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGGTGCAACTTGATGTCTaGCACCCCAATTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWVQLDV*HPNSRL
Trigger: GAGACGAGAATTGGGGTGCCAGACATCAAGTTGCAC...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCGTGCAACTTGATGTCTaGCACCCCAATTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVVQLDV*HPNSRL
Trigger: GAGACGAGAATTGGGGTGCCAGACATCAAGTTGCAC...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCTCCTCCCCGTTCTTaGTCACCCAAGGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQAPPRS*SPKGAT
Trigger: AGTTGCACCCTTGGGTGACCAAGAACGGGGAGGAGC...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCTTGGGGAGCTGCTTTTCAACGCTTCCTCAGCATaGACTTCACCAGGATCACCG +
Preference number: 4 (lower is better)
Translates to: EEGGSAEDEAHRLGELLFNASSA*TSPGSP
Trigger: CGGTGATCCTGGTGAAGTCCATGCTGAGGAAGCGTT...GAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCAACGCTTCCTCAGCATaGACTTCACCAGGATCACCG +
Preference number: 4 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVNASSA*TSPGSP
Trigger: CGGTGATCCTGGTGAAGTCCATGCTGAGGAAGCGTT...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCGTGCCCGGCAGTCCCTaGCCCACCAGTACTTACACC +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRVPGSP*PTSTYT
Trigger: GGTGTAAGTACTGGTGGGCCAGGGACTGCCGGGCAC...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGGTCATGCAGCACGATaGGGGAGGGGCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FRSVHFPDNAECETQSRKGHAAR*GRGGSG
Trigger: CCCACTCCCGCCCCTCCCCCATCGTGCTGCATGACC...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGATTCCAGTCTGTCCCTaGACGTGCGTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWIPVCP*TCVRGG
Trigger: ACCTCCACGCACGCACGTCCAGGGACAGACTGGAAT...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGGGTTTCCCCACAGAATaGGTCAGGCCAAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMGFPTE*VRPRRS
Trigger: GGACCTCCTTGGCCTGACCCATTCTGTGGGGAAACC...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCTTGGGGATCAGTGATTaGCTCTTAACTTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRGHLPACTPLQVLCLVILGISD*LLTCLP
Trigger: TGGAAGGCAAGTTAAGAGCCAATCACTGATCCCCAA...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGGAAAGCTTCCTGGCTaGGAGGCTAGGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRSVHFPDNAECETQSRKGKLPG*EARPGW
Trigger: CCAGCCCGGCCTAGCCTCTCAGCCAGGAAGCTTTCC...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGAGGACCTCGATCAGTTTaGCCACATTCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARGPRSV*PHSRGP
Trigger: TGGACCACGTGAATGTGGTCAAACTGATCGAGGTCC...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCGCACTCACAAAGTGCTaGCTGGGCACAGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRALTKC*LGTEPQ
Trigger: CTGGGGCTCTGTGCCCAGTCAGCACTTTGTGAGTGC...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp ACCTTGGGGACAGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCTCCCTGCTTACTCACTaGACAAGCACTCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: TLGTEMQMGPTPRPGQVPSLLTH*TSTHKV
Trigger: CACTTTGTGAGTGCTTGTTCAGTGAGTAAGCAGGGA...GGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCTGTCCCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCCCGTTCTACCAGCTCTaGCCGAGGATCCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRPFYQL*PRILAA
Trigger: TGCTGCCAGGATCCTCGGGCAGAGCTGGTAGAACGG...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTTGCGGGGGCGGCTGTTaGATGAGGGGTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTCGGGC*MRGGPL
Trigger: CAGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCA...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGAATAATCTTGGGCTGTaGTGGGAACCACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWNNLGL*WEPRKM
Trigger: CATCTTCCGTGGTTCCCAGCACAGCCCAAGATTATT...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCTTCCATCCACTTGGCTaGCAAATAATCTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVFHPLG*QIILGC
Trigger: ACAGCCCAAGATTATTTGGCAGCCAAGTGGATGGAA...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGTTTGCTCATCGCTTGTaGTACATTCAAAAACAACGA +
Preference number: 4 (lower is better)
Translates to: CCMRGGPLEARDECAAGWFAHRL*YIQKQR
Trigger: TCGTTGTTTTTGAATGTAGCACAAGCGATGAGCAAA...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCTGTGGACGATCTTCTaGCAGTGCAAGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLLWTIF*QCKYSR
Trigger: CCTCGAGTACTTGCACTGCCAGAAGATCGTCCACAG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCGAAATCGTCGATGAATaGGCACTTCCCATAGACAAA +
Preference number: 4 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIEIVDE*ALPIDK
Trigger: TTTGTCTATGGGAAGTGCCCATTCATCGACGATTTC...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGTTCTTGATCTTCCTGTaGAGGGCCAGGATGAAATCG +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQFLIFL*RARMKS
Trigger: CGATTTCATCCTGGCCCTCCACAGGAAGATCAAGAA...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp TGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTGTCTTCTCCAGCCTCATGTAGGAGGAGAGGCTaGGTTCCAGTTATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CRVHGPRSKSALVSSPASCRRRG*VPVISA
Trigger: TGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACA...TGAGGCTGGAGAAGACACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACCCCAAGACCCCAAATaGCATACATTCCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARPQDPK*HTFQSV
Trigger: GACAGACTGGAATGTATGTCATTTGGGGTCTTGGGG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGCCCCATACCAGCGTCTaGATAGACAAGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQPHTSV*IDKSSG
Trigger: ACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGG...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCTGATGTCCTCAGGGTaGGGCAATTGCCGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDELMSSG*GNCRRG
Trigger: GCCTCTGCGGCAATTGCCTCACCCTGAGGACATCAG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCGGCCAGCCGGACACTaGTCCCAGAGAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDERPAGH*SQREGE
Trigger: TTCACCTTCTCTCTGGGATCAGTGTCCGGCTGGCCG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGTTGTACTGGTTCAGCTaGACGCAGTCCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLLYWFS*TQSSAS
Trigger: AGATGCAGAGGACTGCGTGCAGCTGAACCAGTACAA...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTGCCGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTCGTGGAAAGCCATACTaGTTCAGTAACTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LPQRPPASVHTPPGSVSRRGKPY*FSNFFL
Trigger: CAAAAAGAAGTTACTGAAGCAGTATGGCTTTCCACG...ACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCCGTGGAAAGCCATACTaGTTCAGTAACTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIRGKPY*FSNFFL
Trigger: CAAAAAGAAGTTACTGAAGCAGTATGGCTTTCCACG...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGTCGGCGATCTTCACGTaGCCATCATCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDESAIFT*PSSPRS
Trigger: GCTCCTGGGGGATGATGGGCACGTGAAGATCGCCGA...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTCTCGGGGGCCATGAATaGTGGGGTTCCCGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTLGGHE*WGSRRA
Trigger: AGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAG...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCTCGCTCTTCCCTCCGTaGTTGGGGCTCAAACGGGTT +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRSLFPP*LGLKRV
Trigger: AACCCGTTTGAGCCCCAAGCACGGAGGGAAGAGCGA...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAAGACAAGAGCTCTGGTaGCACCACCCCAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRRQELW*HHPKVG
Trigger: GCCCACCTTGGGGTGGTGGCACCAGAGCTCTTGTCT...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGTCCGCTTCAGGCCTCTaGTCAGAGCTTGATTCCGTT +
Preference number: 4 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMSASGL*SELDSV
Trigger: AACGGAATCAAGCTCTGAGCAGAGGCCTGAAGCGGA...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGTCTGAGATGGCCACGTaGTGGGACTCGATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDESEMAT*WDSMVG
Trigger: GCCCACCATCGAGTCCCACCACGTGGCCATCTCAGA...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCGGGGGAGGGCGACGTaGAAAGCCATACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRRGRAT*KAILLQ
Trigger: CTGAAGCAGTATGGCTTTCCACGTCGCCCTCCCCCG...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCGGGGGAGGGCGACGTaGAAAGCCATACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDERGRAT*KAILLQ
Trigger: CTGAAGCAGTATGGCTTTCCACGTCGCCCTCCCCCG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGTTCCCACTGAAGCTCTaGCCGGAATCAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQFPLKL*PESEMA
Trigger: GGCCATTTCTGATTCCGGCCAGAGCTTCAGTGGGAA...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCAGGCTCTGGCCGAAATCGTCGATGAATaGGCACTTCCCATAGACAAA +
Preference number: 4 (lower is better)
Translates to: RDANGANTETWPSPQALAEIVDE*ALPIDK
Trigger: TTTGTCTATGGGAAGTGCCCATTCATCGACGATTTC...GGCCAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCGCTCCTCCCCGTTCTTaGTCACCCAAGGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRAPPRS*SPKGAT
Trigger: AGTTGCACCCTTGGGTGACCAAGAACGGGGAGGAGC...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCCCAGGCTCTGGCCTTaGCCCAACGACAGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRPRLWP*PNDSES
Trigger: ACTCTCACTGTCGTTGGGCCAAGGCCAGAGCCTGGG...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCAAGTCCCCAGGCTCTaGCCTTGGCCCAACGACAGT +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRQVPRL*PWPNDS
Trigger: ACTGTCGTTGGGCCAAGGCCAGAGCCTGGGGACTTG...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGGTGAACCCACAGGCGTaGCTCACCATAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRVNPQA*LTIGSP
Trigger: AGGGCTCCCTATGGTGAGCCACGCCTGTGGGTTCAC...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGGCCTCTTGTAGGAGGAGAGGCTaGGTTCCAGTTATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGESEMGRDDVVLPLQASCRRRG*VPVISA
Trigger: TGCTGAAATAACTGGAACCCAGCCTCTCCTCCTACA...AGAGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ATCATCAAGGGAGAGAGTGAGATGGGCAGGGACGATGTGGTGCTTCCGCTTCAGCCTCTGCTCAGAGCTTaGTTCCGTTCAGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: IIKGESEMGRDDVVLPLQPLLRA*FRSVHF
Trigger: AAAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGG...CTGAAGCGGAAGCACCACATCGTCCCTGCCCATCTCACTCTCTCCCTTGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CAGCCGGGTGGCATTTCTGAGGCTCCATGGGCACCCGGTTTCCCCACAGAATGGGGAAAGGACTTTCATTaGATAGTGTCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: QPGGISEAPWAPGFPTEWGKDFH*IVSVFT
Trigger: AGTGAAGACAGACACTATGCAATGAAAGTCCTTTCC...CCATTCTGTGGGGAAACCGGGTGCCCATGGAGCCTCAGAAATGCCACCCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCGTGGATCCACTGTCTTaGTGCTCAGAGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRVDPLS*CSEGSR
Trigger: CCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCAC...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGCCTGGCCTCCACCTaGCATCTTGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSVHFPDNAECETQSRKVSLAST*HLGLLP
Trigger: AGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCT...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCCAGATAACGCCGAATaGGAAACACAGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: STSMSIRSANATSASRTLPDNAE*ETQSRK
Trigger: TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTTAGTTCCATCCACTTaGCTGCCAAATAATCTTGGG +
Preference number: 4 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWLVPST*LPNNLG
Trigger: CCCAAGATTATTTGGCAGCCAAGTGGATGGAACTAA...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTTGTGAGTGCAGCTCTTaGGCCCAGATGGGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: RSVHFPDNAECETQSRKVCECSS*AQMGRP
Trigger: CGGCCTACCCATCTGGGCCCAAGAGCTGCACTCACA...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGGCAGGTTGGATGGCTTaGTGTCCCTGTGGACGATCT +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRAGWMA*CPCGRS
Trigger: AGATCGTCCACAGGGACATCAAGCCATCCAACCTGC...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR TCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGGGGGATGAGCCTGACTaGGTTCTTAACCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDEGDEPD*VLNLLL
Trigger: GAGGAGGAGGTTAAGAACTCAGTCAGGCTCATCCCC...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAACTCTGGGCCACCATCTaGCTCCTCCAAGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FRSVHFPDNAECETQSRKLWATI*LLQVSH
Trigger: GTGACTCACTTGGAGGAGGCAGATGGTGGCCCAGAG...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGCGTGGAAAGCCATACTaGTTCAGTAACTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PASLLQEANISLSANLCQRGKPY*FSNFFL
Trigger: CAAAAAGAAGTTACTGAAGCAGTATGGCTTTCCACG...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTGGAGCTCTGGGCTCTTaGCCCCTTCACCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: RSVHFPDNAECETQSRKVGALGS*PLHQTL
Trigger: AAGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCC...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTGTCTGTCCCTGGACGTaGGTGCGTGGAGGTCATGCA +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTVCPWT*VRGGHA
Trigger: TGCATGACCTCCACGCACGCACGTCCAGGGACAGAC...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTCCCCTCTCCACCATATaGCTGTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTPLSTI*LWQLSQ
Trigger: CTGGCTCAGCTGCCACAGGCATATGGTGGAGAGGGG...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCAAACTGTATTACAGATaGATGTACCAGTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVKLYYR*MYQCRT
Trigger: TGTCCTGCACTGGTACATGCATCTGTAATACAGTTT...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CCAGCGGGAGGTCTCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTTTGCTCATCGCTTGTaGTACATTCAAAAACAACGA +
Preference number: 4 (lower is better)
Translates to: PAGGLFRCGKPGLHLPSWFAHRL*YIQKQR
Trigger: TCGTTGTTTTTGAATGTAGCACAAGCGATGAGCAAA...CCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGAGACCTCCCGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCCACTCTTATAGAGTTTaGTCATCGCTTGTGCTACAT +
Preference number: 4 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVHSYRV*SSLVLH
Trigger: ATGTAGCACAAGCGATGAGCAAACTCTATAAGAGTG...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCAGTGAGTCACATCGATaGCTGCCACCCGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRSESHR*LPPVLP
Trigger: TGGTAGAACGGGTGGCAGCCATCGATGTGACTCACT...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAGAGGTTGTCCTCAGCTaGGTCATCCAGGACCTCGAT +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNREVVLS*VIQDLD
Trigger: ATCGAGGTCCTGGATGACCCAGCTGAGGACAACCTC...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCTCTAACTGGATATTCTaGGCCTGGTTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRSNWIF*AWFCRA
Trigger: GGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGA...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCAGGAGCAGGTTGGATaGCTTGATGTCCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDEQEQVG*LDVPVD
Trigger: GTCCACAGGGACATCAAGCCATCCAACCTGCTCCTG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CCCAGACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCTCGTTCCCCTCAAACTaGTTGCTGACGCCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: PRLAFIIVKKVDLLRTRRSFPSN*LLTPKS
Trigger: CGACTTTGGCGTCAGCAACCAGTTTGAGGGGAACGA...GCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CCA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGTTAGTTCCATCCACTTaGCTGCCAAATAATCTTGGG +
Preference number: 4 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKLVPST*LPNNLG
Trigger: CCCAAGATTATTTGGCAGCCAAGTGGATGGAACTAA...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAGGACACCCACACCTGTaGCCAAAAGCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRGHPHL*PKALVH
Trigger: ATGGACAAGGGCTTTTGGCCACAGGTGTGGGTGTCC...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGGGACCTCGATCAGTTTaGCCACATTCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDEGPRSV*PHSRGP
Trigger: TGGACCACGTGAATGTGGTCAAACTGATCGAGGTCC...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGCAGGTTGGATGGCTTaGTGTCCCTGTGGACGATCT +
Preference number: 4 (lower is better)
Translates to: FRSVHFPDNAECETQSRKAGWMA*CPCGRS
Trigger: AGATCGTCCACAGGGACATCAAGCCATCCAACCTGC...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGCAAAGCAGTACAACGTaGCGCCAGTGGCCCATACAT +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRQSSTT*RQWPIH
Trigger: ATGTATGGGCCACTGGCGTCACGTTGTACTGCTTTG...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGTCAAGGGGGTTCTTCTaGGTAGCCTTGTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRSRGFF*VALLGT
Trigger: GGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGA...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR GCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGTCAAGGGGGTTCTTCTaGGTAGCCTTGTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDESRGFF*VALLGT
Trigger: GGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGA...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348335.7
CDS-3UTR GCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGATCCGCTTCAGGCCTCTaGTCAGAGCTTGATTCCGTT +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRSASGL*SELDSV
Trigger: AACGGAATCAAGCTCTGAGCAGAGGCCTGAAGCGGA...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RSVHFPDNAECETQSRKVFLEQT*IALPSV
Trigger: CACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAA...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAAATAGACAAGAGCTCTaGTGCCACCACCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRNRQEL*CHHPKV
Trigger: CACCTTGGGGTGGTGGCACCAGAGCTCTTGTCTATT...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGGTGATCCCTCCGACCTaGACAGTTTGTCCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDEVIPPT*TVCPSL
Trigger: CAACGAAGGACAAACTGTCCAGGTCGGAGGGATCAC...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp GGACAGTTTGTCCTTCGTTGTAGGAGTGTGAGTGCAGCTCTTGGGCCCAGATGGTTGGGGATCAGTGATTaGCTCTTAACTTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GQFVLRCRSVSAALGPRWLGISD*LLTCLP
Trigger: TGGAAGGCAAGTTAAGAGCCAATCACTGATCCCCAA...CCATCTGGGCCCAAGAGCTGCACTCACACTCCTACAACGAAGGACAAACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGACCCCAAGACCCCAAATaGCATACATTCCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRPQDPK*HTFQSV
Trigger: GACAGACTGGAATGTATGTCATTTGGGGTCTTGGGG...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACACTCTTATAGAGTTTaGTCATCGCTTGTGCTACAT +
Preference number: 4 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARHSYRV*SSLVLH
Trigger: ATGTAGCACAAGCGATGAGCAAACTCTATAAGAGTG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTGTTTCTAGTAGGCTCTaGGCCACCATCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTVSSRL*ATICLL
Trigger: GAGGAGGCAGATGGTGGCCCAGAGCCTACTAGAAAC...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTGGGGGTCAACCTCTATaGGCATTCGGTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTGGQPL*AFGQQM
Trigger: CATTTGCTGACCGAATGCTCATAGAGGTTGACCCCC...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGTGTCCGAGTCCTGCGTaGCCCTGTGGGGGTCAACCT +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTCPSPA*PCGGQP
Trigger: AGGTTGACCCCCACAGGGTCACGCAGGACTCGGACA...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR TCA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGACACTTGGGGATCAGTaGTTGGCTCTTAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: TDACTSAGHTSELCATDETLGDQ*LALNLP
Trigger: AGGCAAGTTAAGAGCCAATCACTGATCCCCAAGTGT...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGAGCTCTGGCCCGTGGTaGGGGGTCCACACCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTSSGPW*GVHTVS
Trigger: AGAAACGGTGTGGACCCCCCACCACGGGCCAGAGCT...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGGAGATGGCCACGTGGTaGGACTCGATGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTEMATW*DSMVGL
Trigger: GAGGCCCACCATCGAGTCCCACCACGTGGCCATCTC...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTTTCCCACTGAAGCTCTaGCCGGAATCAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTFPLKL*PESEMA
Trigger: GGCCATTTCTGATTCCGGCCAGAGCTTCAGTGGGAA...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTCCAGATAACGCCGAATaGGAAACACAGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RSVHFPDNAECETQSRKVPDNAE*ETQSRK
Trigger: TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGG...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGTGGGCAGGGACGATGTaGTGCTTCCGCTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTWAGTM*CFRFRP
Trigger: AGGCCTGAAGCGGAAGCACCACATCGTCCCTGCCCA...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGATGCTCAAGAAACACTTaGGGATCAGTGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRCSRNT*GSVIGS
Trigger: AGAGCCAATCACTGATCCCCAAGTGTTTCTTGAGCA...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGGCTCCTCCCCGTTCTTaGTCACCCAAGGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTAPPRS*SPKGAT
Trigger: AGTTGCACCCTTGGGTGACCAAGAACGGGGAGGAGC...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGAGTCACATCGATGGCTaGCACCCGTTCTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTSHIDG*HPFYQL
Trigger: GAGCTGGTAGAACGGGTGGCAGCCATCGATGTGACT...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGAATAGACAAGAGCTCTaGTGCCACCACCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTNRQEL*CHHPKV
Trigger: CACCTTGGGGTGGTGGCACCAGAGCTCTTGTCTATT...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGTTGCCAATCTCACTCTaGAGCTTGTACTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTLPISL*SLYWFS
Trigger: GCTGAACCAGTACAAGCTGCAGAGTGAGATTGGCAA...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR GCA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGAATAATCTTGGGCTGTaGTGGGAACCACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LNRRRNCITDACTSAGHTNNLGL*WEPRKM
Trigger: CATCTTCCGTGGTTCCCAGCACAGCCCAAGATTATT...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp GGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGCCCTGGGTaGATGCAGGGGCTCAGGATGCAGCCTCGTCTTCCTGGACGCCGG +
Preference number: 5 (lower is better)
Translates to: GLWRRGMSVLPGGPG*MQGLRMQPRLPGRR
Trigger: CCGGCGTCCAGGAAGACGAGGCTGCATCCTGAGCCCCTGCATGCACCCAGGGCCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp GAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCCTCTTCCCTCCGTGCTaGGGGCTCAAACGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: EPSANAGSSPVVHRPACPLFPPC*GLKRVP
Trigger: GGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGAG...GGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp GGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCGGCAGCCTGGGCCACTaGGGAGAGCAGCCAACAGTC +
Preference number: 5 (lower is better)
Translates to: GGWASDLPTQLQGVPGSPGSLGH*GEQPTV
Trigger: GACTGTTGGCTGCTCTCCCAAGTGGCCCAGGCTGCC...GGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp CAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTGGCCCACCAGTATTCTGCGTAGCCTTGTaGGGAACCTGGGCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: QTSPPNSRECPAVPGPPVFCVAL*GTWAPG
Trigger: GCCCGGCGCCCAGGTTCCCAACAAGGCTACGCAGAA...TACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTGGCTCCTCCCCGTTCTaGGTCACCCAAGGGTGCAAC +
Preference number: 5 (lower is better)
Translates to: REPSANAGSSPVVHRPACGSSPF*VTQGCN
Trigger: GTTGCACCCTTGGGTGACCAAGAACGGGGAGGAGCC...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp CATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCGGCTCCTCCCCGTTCTaGGTCACCCAAGGGTGCAAC +
Preference number: 5 (lower is better)
Translates to: HAQGHRPVASMALGQSQPGSSPF*VTQGCN
Trigger: GTTGCACCCTTGGGTGACCAAGAACGGGGAGGAGCC...GGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTCTCTTCCCTCCGTGCTaGGGGCTCAAACGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGLFPPC*GLKRVP
Trigger: GGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGAG...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCTTCTTCTGCGTAGCCTaGTTGGGAACCTGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: RVGGWASDLPTQLQGVPGFFCVA*LGTWAP
Trigger: CGGCGCCCAGGTTCCCAACAAGGCTACGCAGAAGAA...GCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCAGCAGGTTGGATGGCTaGATGTCCCTGTGGACGATC +
Preference number: 5 (lower is better)
Translates to: GALGQCGFLSRGPPASLSSRLDG*MSLWTI
Trigger: GATCGTCCACAGGGACATCAAGCCATCCAACCTGCT...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp GGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTTCCCCTCAAACTGGTaGCTGACGCCAAAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GGWASDLPTQLQGVPGSPFPSNW*LTPKSA
Trigger: CGCCGACTTTGGCGTCAGCAACCAGTTTGAGGGGAA...GGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTTCCTCCGAGAAGGGCTaGTCACAGGGCACTTCCATG +
Preference number: 5 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPSSEKG*SQGTSM
Trigger: CATGGAAGTGCCCTGTGACAAGCCCTTCTCGGAGGA...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGTTCCCCTCAAACTGGTaGCTGACGCCAAAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: CCMRGGPLEARDECAAGWFPSNW*LTPKSA
Trigger: CGCCGACTTTGGCGTCAGCAACCAGTTTGAGGGGAA...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp CGCAGAGGCCACCTGCCAGCGTGCACACCCCTCCAGGTTCTGTGTCTCGTGATCGGGAGCTCTGGGCTCTaGCCCCCTTCACCAAACCCT +
Preference number: 5 (lower is better)
Translates to: RRGHLPACTPLQVLCLVIGSSGL*PPSPNP
Trigger: AGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCCC...GATCACGAGACACAGAACCTGGAGGGGTGTGCACGCTGGCAGGTGGCCTCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp GAGTGGGAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTaGCCGGCAGTCCCTGGCCCACCAGTACTTACACCAGTAGGTTTC +
Preference number: 5 (lower is better)
Translates to: EWEDGPQTSPPNSRE*PAVPGPPVLTPVGF
Trigger: GAAACCTACTGGTGTAAGTACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 90 bp CCCATGCAGCCTGCTTCCTGCATCTACCTGAGCGCGCAGCCCACGTaGATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PMQPASCIYLSAQPT*IHCLAAQREAGSGA
Trigger: AGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGGTAGATGCAGGAAGCAGGCTGCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp CGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCAAAGTCAGCCCTGGTAGCAGGTTGGATGGCTaGATGTCCCTGTGGACGATC +
Preference number: 5 (lower is better)
Translates to: RRATGLSRPWPSVKVSPGSRLDG*MSLWTI
Trigger: GATCGTCCACAGGGACATCAAGCCATCCAACCTGCT...ACCAGGGCTGACTTTGACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGACCACGGGCTCATTCTaGATCTTCCTGTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRTTGSF*IFLWRA
Trigger: GGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGGT...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGGGCTGCCAAATAATCTaGGGCTGTGCTGGGAACCAC +
Preference number: 5 (lower is better)
Translates to: CCMRGGPLEARDECAAGWGCQII*GCAGNH
Trigger: GTGGTTCCCAGCACAGCCCAAGATTATTTGGCAGCC...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS TCA 90 bp CCGCCGTGCTGGACAGCTGAGCGTCGTTCCCCTCAAACTGGTTGCTaGCGCCAAAGTCGGCGATCTTCACGTGCCCATCATCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PPCWTAERRSPQTGC*RQSRRSSRAHHPPG
Trigger: TCCTGGGGGATGATGGGCACGTGAAGATCGCCGACTTTGGCGTCAGCAACCAGTTTGAGGGGAACGACGCTCAGCTGTCCAGCACGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp CTCTGGGCCACCATCTGCCTCCTCCAAGTGAGTCACATCGATGGCTaGCACCCGTTCTACCAGCTCTGCCCGAGGATCCTGGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: LWATICLLQVSHIDG*HPFYQLCPRILAAD
Trigger: GTCTGCTGCCAGGATCCTCGGGCAGAGCTGGTAGAACGGGTGGCAGCCATCGATGTGACTCACTTGGAGGAGGCAGATGGTGGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS CCA 90 bp GAAGCTCTGGCCGGAATCAGAAATGGCCTCGGGGGCCATGAATGCTaGGGTTCCCGCCGTGCTGGACAGCTGAGCGTCGTTCCCCTCAAA +
Preference number: 5 (lower is better)
Translates to: EALAGIRNGLGGHEC*GSRRAGQLSVVPLK
Trigger: TTTGAGGGGAACGACGCTCAGCTGTCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCATTTCTGATTCCGGCCAGAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CCA 90 bp GCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTaGCCCACCAGTACTTACACCAGTAGGTTTCCTGGAGCAGACATG +
Preference number: 5 (lower is better)
Translates to: ASDLPTQLQGVPGSP*PTSTYTSRFPGADM
Trigger: CATGTCTGCTCCAGGAAACCTACTGGTGTAAGTACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 90 bp AACAGCCAGGACTCAGACCCACAGGACCAGACACGACGAAGGATCTaGCACATGCCCAGTGGAGTCCACCGCCCGCCCCACCCCACAAAA +
Preference number: 5 (lower is better)
Translates to: NSQDSDPQDQTRRRI*HMPSGVHRPPHPTK
Trigger: TTTTGTGGGGTGGGGCGGGCGGTGGACTCCACTGGGCATGTGCCAGATCCTTCGTCGTGTCTGGTCCTGTGGGTCTGAGTCCTGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACATCTCACTCTGCAGCTaGTACTGGTTCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: PEELCLHALQHPRSEQADISLCS*YWFSCT
Trigger: CGTGCAGCTGAACCAGTACAAGCTGCAGAGTGAGAT...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp GAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTAGGACCTCGATCAGTTaGACCACATTCACGTGGTCC +
Preference number: 5 (lower is better)
Translates to: EDGPQTSPPNSRECPAVPRTSIS*TTFTWS
Trigger: GGACCACGTGAATGTGGTCAAACTGATCGAGGTCCT...AGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp AGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCAGGCTCTGGCCCAGGTAGAGGCGAGCTaGCTCCTCCGAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: RDANGANTETWPSPQALAQVEAS*LLREGL
Trigger: AAGCCCTTCTCGGAGGAGCAAGCTCGCCTCTACCTG...GGCCAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCCAGGTAGAGGCGAGCTaGCTCCTCCGAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVQVEAS*LLREGL
Trigger: AAGCCCTTCTCGGAGGAGCAAGCTCGCCTCTACCTG...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAAACCACGGGCTCATTCTaGATCTTCCTGTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKTTGSF*IFLWRA
Trigger: GGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGGT...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCCTTTCAGGATCAGGTCCTaGAGCTCCTCGCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: SPRPMRVPLPWSTGQPVPFRIRS*SSSLIS
Trigger: AGAAATCAGCGAGGAGCTCAAGGACCTGATCCTGAA...AGGGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp GAGGATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTACCCAAGGGTGCAACTaGATGTCTGGCACCCCAATT +
Preference number: 5 (lower is better)
Translates to: EDGPQTSPPNSRECPAVPTQGCN*MSGTPI
Trigger: AATTGGGGTGCCAGACATCAAGTTGCACCCTTGGGT...AGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGGCTCCTCCCCGTTCTaGGTCACCCAAGGGTGCAAC +
Preference number: 5 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGGSSPF*VTQGCN
Trigger: GTTGCACCCTTGGGTGACCAAGAACGGGGAGGAGCC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGCCTCCACCTGCCATCTaGGTCTCCTGCCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGPPPAI*VSCLCL
Trigger: GAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAGG...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TCTTCCGTTGTGGTAAGCCTGGCCTCCACCTGCCATCTTGGTCTCCTGCCTCTGCTCAGGGTGAGGCAATaGCCGCAGAGGCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: SSVVVSLASTCHLGLLPLLRVRQ*PQRPPA
Trigger: GGCAGGTGGCCTCTGCGGCAATTGCCTCACCCTGAG...CAGAGGCAGGAGACCAAGATGGCAGGTGGAGGCCAGGCTTACCACAACGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGTGTCCGAGTCCTGCGTGACCCTGTGGGGGTCAACCTCTATGAGCATTCGGTCCTCAGGGTGAGGCAATaGCCGCAGAGGCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: SVRVLRDPVGVNLYEHSVLRVRQ*PQRPPA
Trigger: GGCAGGTGGCCTCTGCGGCAATTGCCTCACCCTGAG...GACCGAATGCTCATAGAGGTTGACCCCCACAGGGTCACGCAGGACTCGGACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp CCGGAAGAGCTGTGTCTGCACGCGCTCCAGCACCCCCGCTCTGAGCAGGCTGACTGTGGCCAAAAGCCCTaGTCCATCCATGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PEELCLHALQHPRSEQADCGQKP*SIHVSR
Trigger: CCTGGAAACATGGATGGACAAGGGCTTTTGGCCACA...GTCAGCCTGCTCAGAGCGGGGGTGCTGGAGCGCGTGCAGACACAGCTCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TGTTGCATGAGGGGTGGGCCTCTGGAGGCGCGGGATGAGTGTGCTGCCGGGTGGTGTGGCCAAAAGCCCTaGTCCATCCATGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CCMRGGPLEARDECAAGWCGQKP*SIHVSR
Trigger: CCTGGAAACATGGATGGACAAGGGCTTTTGGCCACA...CCACCCGGCAGCACACTCATCCCGCGCCTCCAGAGGCCCACCCCTCATGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS TCA 90 bp GCTACAGTGTCTGGGAACCCATGCAGCCTGCTTCCTGCATCTACCTaGGCGCGCAGCCCACGTGGATCCACTGTCTTGCTGCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ATVSGNPCSLLPAST*ARSPRGSTVLLLRG
Trigger: CCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGGTAGATGCAGGAAGCAGGCTGCATGGGTTCCCAGACACTGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGTTCTGCGTAGCCTTGTaGGGAACCTGGGCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: STSMSIRSANATSASRTLFCVAL*GTWAPG
Trigger: GCCCGGCGCCCAGGTTCCCAACAAGGCTACGCAGAA...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348335.7
CDS-3UTR CAA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCTTCTTCTGCGTAGCCTaGTTGGGAACCTGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVFFCVA*LGTWAP
Trigger: CGGCGCCCAGGTTCCCAACAAGGCTACGCAGAAGAA...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348335.7
CDS-3UTR CAA 90 bp AGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCAGGCTCTGGCCGGGCTGGGAGCAGTCTaGAAGTACTGCCAGGGATCA +
Preference number: 5 (lower is better)
Translates to: RDANGANTETWPSPQALAGLGAV*KYCQGS
Trigger: TGATCCCTGGCAGTACTTCAAGACTGCTCCCAGCCC...GGCCAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGAGGACCTCGATCAGTTaGACCACATTCACGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRRTSIS*TTFTWS
Trigger: GGACCACGTGAATGTGGTCAAACTGATCGAGGTCCT...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCAGGCTCTGGCCCGTGGATCCACTGTCTaGCTGCTCAGAGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RDANGANTETWPSPQALARGSTV*LLRGKQ
Trigger: CTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACG...GGCCAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGTCCTCCGAGAAGGGCTaGTCACAGGGCACTTCCATG +
Preference number: 5 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRSSEKG*SQGTSM
Trigger: CATGGAAGTGCCCTGTGACAAGCCCTTCTCGGAGGA...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGAGATGCAAATGGGGCCAACACCGAGACCTGGCCAAGTCCCCAGGCTCTGGCCACCACGGGCTCATTCTaGATCTTCCTGTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RDANGANTETWPSPQALATTGSF*IFLWRA
Trigger: GGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGGT...GGCCAGAGCCTGGGGACTTGGCCAGGTCTCGGTGTTGGCCCCATTTGCATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGCTCTTCCCTCCGTGCTaGGGGCTCAAACGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKLFPPC*GLKRVP
Trigger: GGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGAG...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp CCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGATGGGGGAGGGCCTCTGCTCAGAGCTaGATTCCGTTCAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: PVCPWTCVRGGHAARWGRASAQS*IPFSPL
Trigger: AAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGGC...CCTCCCCCATCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp GCGGAGATGCAGCGGGATCCGGGTTTCTCCCCCAGCCAGCCTCCCTTCTCCAAATTCTGCGTAGCCTTGTaGGGAACTCTCCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: AEMQRDPGFSPSQPPFSKFCVAL*GTLHCS
Trigger: GCTGCAGTGGAGAGTTCCCAACAAGGCTACGCAGAA...TTTGGAGAAGGGAGGCTGGCTGGGGGAGAAACCCGGATCCCGCTGCATCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS GCA 90 bp AGGATGCAGCCTCGTCTTCCTGGACGCCGGGGAGCTCTGGGCTCTTaGCCCCTTCACCAAACCCTTCTTTCACCAGTAGGTTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RMQPRLPGRRGALGS*PLHQTLLSPVGFLE
Trigger: CTCCAGGAAACCTACTGGTGAAAGAAGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCCCCGGCGTCCAGGAAGACGAGGCTGCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp GAGGCACAGAGCTACAGTGTCTGGGAACCCATGCAGCCTGCTTCCTaGATCTACCTGAGCGCGCAGCCCACGTGGATCCACTGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: EAQSYSVWEPMQPAS*IYLSAQPTWIHCLA
Trigger: AGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGGTAGATGCAGGAAGCAGGCTGCATGGGTTCCCAGACACTGTAGCTCTGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp GGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTCCGGGGCTTGGCGATATTaGTTGAATCTAACTGGATAT +
Preference number: 5 (lower is better)
Translates to: GALGQCGFLSRGPPASLSGAWRY*LNLTGY
Trigger: ATATCCAGTTAGATTCAACAAATATCGCCAAGCCCC...GGACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp ATAGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTCTCGTCTCGGGATTCTaGTCTAACATCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: IGSPRPMRVPLPWSTGQPLVSGF*SNIFRI
Trigger: GATCCTGAAGATGTTAGACAAGAATCCCGAGACGAG...AGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp ACATACATTCCAGTCTGTCCCTGGACGTGCGTGCGTGGAGGTCATGCAGCACGACAGGTAGAGGCGAGCTaGCTCCTCCGAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: TYIPVCPWTCVRGGHAARQVEAS*LLREGL
Trigger: AAGCCCTTCTCGGAGGAGCAAGCTCGCCTCTACCTG...TCGTGCTGCATGACCTCCACGCACGCACGTCCAGGGACAGACTGGAATGTATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGTTATTTCAGCATGCGCAGGGCCACAGGCCTGTCGCGTCCATGGCCCTCGGTCACCCAAGGGTGCAACTaGATGTCTGGCACCCCAATT +
Preference number: 5 (lower is better)
Translates to: SYFSMRRATGLSRPWPSVTQGCN*MSGTPI
Trigger: AATTGGGGTGCCAGACATCAAGTTGCACCCTTGGGT...GACCGAGGGCCATGGACGCGACAGGCCTGTGGCCCTGCGCATGCTGAAATAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGCCCAGAGGAGCCGGGGAGAAACGTGGACCCACTGACAATGGGGCACATTCGGTCCGACCTGGACAGTTaGTCCTTCGTTGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: SPEEPGRNVDPLTMGHIRSDLDS*SFVVGV
Trigger: CACTCCTACAACGAAGGACAAACTGTCCAGGTCGGA...CCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCTCCCCGGCTCCTCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS TCA 90 bp CGATCTTCACGTGCCCATCATCCCCCAGGAGCAGGTTGGATGGCTTaGTGTCCCTGTGGACGATCTTCTGGCAGTGCAAGTACTCGAGGC +
Preference number: 5 (lower is better)
Translates to: RSSRAHHPPGAGWMA*CPCGRSSGSASTRG
Trigger: GCCTCGAGTACTTGCACTGCCAGAAGATCGTCCACAGGGACATCAAGCCATCCAACCTGCTCCTGGGGGATGATGGGCACGTGAAGATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp AGGAGGTCAAACACTGAGCGCGCAGCCCACGTGGATCCACTGTCTTaGTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTTGTT +
Preference number: 5 (lower is better)
Translates to: RRSNTERAAHVDPLS*CSEGSREWGLAIFV
Trigger: AACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGTGTTTGACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS GCA 90 bp TTCCCCTCAAACTGGTTGCTGACGCCAAAGTCGGCGATCTTCACGTaGCCATCATCCCCCAGGAGCAGGTTGGATGGCTTGATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FPSNWLLTPKSAIFT*PSSPRSRLDGLMSL
Trigger: CAGGGACATCAAGCCATCCAACCTGCTCCTGGGGGATGATGGGCACGTGAAGATCGCCGACTTTGGCGTCAGCAACCAGTTTGAGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp TTCCTGCATCTACCTGAGCGCGCAGCCCACGTGGATCCACTGTCTTaGTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTTGTT +
Preference number: 5 (lower is better)
Translates to: FLHLPERAAHVDPLS*CSEGSREWGLAIFV
Trigger: AACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGGTAGATGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 90 bp CCTGGCCCACCAGTACTTACACCAGTAGGTTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTGCTTGGGGCTCAAACGGGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: PGPPVLTPVGFLEQT*IALPSVLGAQTGSQ
Trigger: TTGGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAAACCTACTGGTGTAAGTACTGGTGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 90 bp TGTTGGGAACCTGCTGGTTCCTCATTGGGACTGGGAGCTCCTGGATaGCAAGCACTGTGCCTGATTCGTCCAGCACACAGCCTGTCGCAT +
Preference number: 5 (lower is better)
Translates to: CWEPAGSSLGLGAPG*QALCLIRPAHSLSH
Trigger: ATGCGACAGGCTGTGTGCTGGACGAATCAGGCACAGTGCTTGCCATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGATCTCACTCTGCAGCTaGTACTGGTTCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: PASLLQEANISLSANLCQISLCS*YWFSCT
Trigger: CGTGCAGCTGAACCAGTACAAGCTGCAGAGTGAGAT...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp CCCAGTGAGGGGTCCGAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGAGGACCTCGATCAGTTaGACCACATTCACGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSEGSEPPYQRLNRQELWRTSIS*TTFTWS
Trigger: GGACCACGTGAATGTGGTCAAACTGATCGAGGTCCT...CCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTCGGACCCCTCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp GAGCCCCCATACCAGCGTCTGAATAGACAAGAGCTCTGGTGCCACCACCCCAAGGGCTGCCAAATAATCTaGGGCTGTGCTGGGAACCAC +
Preference number: 5 (lower is better)
Translates to: EPPYQRLNRQELWCHHPKGCQII*GCAGNH
Trigger: GTGGTTCCCAGCACAGCCCAAGATTATTTGGCAGCC...CTTGGGGTGGTGGCACCAGAGCTCTTGTCTATTCAGACGCTGGTATGGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCGCCTCTGCTCAGAGCTaGATTCCGTTCAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVASAQS*IPFSPL
Trigger: AAGTGGACTGAACGGAATCAAGCTCTGAGCAGAGGC...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TCCCACCTGGGCCTACCCCTGAGCTTTCCAAGGGTGGGTCCGATCAAAGTGGTCTTCTTCTGCGTAGCCTaGTTGGGAACTCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: SHLGLPLSFPRVGPIKVVFFCVA*LGTLHC
Trigger: GCAGTGGAGAGTTCCCAACAAGGCTACGCAGAAGAA...GACCACTTTGATCGGACCCACCCTTGGAAAGCTCAGGGGTAGGCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS TCA 90 bp TTTTTCTTCTGTCCCCAGGAGGTCAGTGCATTTACACCGCCCACCTaGAGGTCATACATGTCCCAAGGGAGCCCTTGGGCCAGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: FFFCPQEVSAFTPPT*RSYMSQGSPWASPE
Trigger: CTCAGGGCTGGCCCAAGGGCTCCCTTGGGACATGTATGACCTTCAGGTGGGCGGTGTAAATGCACTGACCTCCTGGGGACAGAAGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 90 bp GGACAGTGTTTCCAGCATCATCTTTCACTAACCACGGCCCTCCTCTaGCCACTGGAGGCTTCAGCCAGACTCCACTTCTCCCCAGACTCA +
Preference number: 5 (lower is better)
Translates to: GQCFQHHLSLTTALL*PLEASARLHFSPDS
Trigger: TGAGTCTGGGGAGAAGTGGAGTCTGGCTGAAGCCTCCAGTGGGCAGAGGAGGGCCGTGGTTAGTGAAAGATGATGCTGGAAACACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 90 bp CAGACAGAGCTTTCTCAGGCACAAATCCCATCACGCCCCTCCCCATaGTTAAAGCTCTCAGGGCCTCACAGAGCTGGCAGGATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QTELSQAQIPSRPSP*LKLSGPHRAGRMQS
Trigger: TGACTGCATCCTGCCAGCTCTGTGAGGCCCTGAGAGCTTTAAGCATGGGGAGGGGCGTGATGGGATTTGTGCCTGAGAAAGCTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 90 bp CTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTTGTTGGGAACCTGCTaGTTCCTCATTGGGACTGGGAGCTCCTGGATGGCAAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LQSRGFFCVALLGTC*FLIGTGSSWMASTV
Trigger: CACAGTGCTTGCCATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp AGGGAGCCCTCGGCCAATGCGGGTTCCTCTCCCGTGGTCCACCGGCCAGCCTGTGCTTGGCGATATTTGTaGAATCTAACTGGATATTCT +
Preference number: 5 (lower is better)
Translates to: REPSANAGSSPVVHRPACAWRYL*NLTGYS
Trigger: AGAATATCCAGTTAGATTCAACAAATATCGCCAAGC...ACAGGCTGGCCGGTGGACCACGGGAGAGGAACCCGCATTGGCCGAGGGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp CCCGCCAGCCTCCTACAGGAAGCCAACATCAGCCTGTCTGCAAACCTCTGCCAGAGCAGGGAGTGGGGCTaGGCGATATTTGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: PASLLQEANISLSANLCQSREWG*AIFVES
Trigger: AGATTCAACAAATATCGCCAAGCCCCACTCCCTGCT...CTGGCAGAGGTTTGCAGACAGGCTGATGTTGGCTTCCTGTAGGAGGCTGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS-3UTR CAA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGAGCAGGTTGGATGGCTaGATGTCCCTGTGGACGATC +
Preference number: 5 (lower is better)
Translates to: STSMSIRSANATSASRTLSRLDG*MSLWTI
Trigger: GATCGTCCACAGGGACATCAAGCCATCCAACCTGCT...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp GGTGTCTTCTCCAGCCTCAGCTCTAGGGGCATCATCAAGGGAGAGAGTGAGATGTTCCCCTCAAACTGGTaGCTGACGCCAAAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GVFSSLSSRGIIKGESEMFPSNW*LTPKSA
Trigger: CGCCGACTTTGGCGTCAGCAACCAGTTTGAGGGGAA...CATCTCACTCTCTCCCTTGATGATGCCCCTAGAGCTGAGGCTGGAGAAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTCTGCGGGGGCGGCTGTaGCATGAGGGGTGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTLRGRL*HEGWAS
Trigger: AGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCAG...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp TTGCTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTTGTTGGGAACCTaGTGGTTCCTCATTGGGACTGGGAGCTCCTGGATGGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: LLQSRGFFCVALLGT*WFLIGTGSSWMAST
Trigger: AGTGCTTGCCATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGCTCGTCTCGGGATTCTaGTCTAACATCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGLVSGF*SNIFRI
Trigger: GATCCTGAAGATGTTAGACAAGAATCCCGAGACGAG...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGCCTCCACCTGCCATCTaGGTCTCCTGCCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TDACTSAGHTSELCATDEPPPAI*VSCLCL
Trigger: GAGGCAGAGGCAGGAGACCAAGATGGCAGGTGGAGG...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CCA 90 bp GCCCACGTGGATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGGAGTaGGGCTTGGCGATATTTGTTGAATCTAACTGGATATTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AHVDPLSCCSEGSRE*GLAIFVESNWIFWA
Trigger: GGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000158166.5
ENST00000573483.1
CDS CCA 90 bp CTTCACCAAACCCTTCTTTCACCAGTAGGTTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTGCTTGGGGCTCAAACGGGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LHQTLLSPVGFLEQT*IALPSVLGAQTGSQ
Trigger: TTGGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAAACCTACTGGTGAAAGAAGGGTTTGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CCA 90 bp AGGGAGTGGGGCTTGGCGATATTTGTTGAATCTAACTGGATATTCTaGGCCTGGTTCTGCAGGGCTGGGCAAGGGAATCCAGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: REWGLAIFVESNWIF*AWFCRAGQGNPGLQ
Trigger: CTGAAGCCCTGGATTCCCTTGCCCAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp ACTGGCTTTTATTATAGTGAAGAAGGTGGATCTGCTGAGGACGAGGCGCACAGGACGAGGCGCACAGGCTaGGGGAGCTGCTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: TGFYYSEEGGSAEDEAHRTRRTG*GSCFSG
Trigger: TCCAGAAAAGCAGCTCCCCAAGCCTGTGCGCCTCGT...CCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTATAATAAAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS TCA 90 bp CCGGTAATCCCAGCCCTTTGGAAGGCTGAGGTGGAGCGTATCATTTaGGCCCAGGAGTTTGAGAACAGCCTGGTCCACATAGTGAAACTC +
Preference number: 5 (lower is better)
Translates to: PVIPALWKAEVERII*AQEFENSLVHIVKL
Trigger: GAGTTTCACTATGTGGACCAGGCTGTTCTCAAACTCCTGGGCTCAAATGATACGCTCCACCTCAGCCTTCCAAAGGGCTGGGATTACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 90 bp CCATTCTGGGCAGCCACATGCCCAACCAAGAACCAAGGACTGAATTaGTACCGGGAGAACAGATATCCGGAACAACTAGTGGACTCCACC +
Preference number: 5 (lower is better)
Translates to: PFWAATCPTKNQGLN*YRENRYPEQLVDST
Trigger: GGTGGAGTCCACTAGTTGTTCCGGATATCTGTTCTCCCGGTAGCAATTCAGTCCTTGGTTCTTGGTTGGGCATGTGGCTGCCCAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 90 bp AGGCAGGGACAGGACAGGGGACCCTGGGATATGAGAGCAAATAAATaGATGAGAGTGGGGTCTGCTATGGACCTGTCTCATCTGATCCTC +
Preference number: 5 (lower is better)
Translates to: RQGQDRGPWDMRANK*MRVGSAMDLSHLIL
Trigger: GAGGATCAGATGAGACAGGTCCATAGCAGACCCCACTCTCATGCATTTATTTGCTCTCATATCCCAGGGTCCCCTGTCCTGTCCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 90 bp TGGGGCTTGGCGATATTTGTTGAATCTAACTGGATATTCTGGGCCTaGTTCTGCAGGGCTGGGCAAGGGAATCCAGGGCTTCAGAACGTG +
Preference number: 5 (lower is better)
Translates to: WGLAIFVESNWIFWA*FCRAGQGNPGLQNV
Trigger: CACGTTCTGAAGCCCTGGATTCCCTTGCCCAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp ACAGATGCATGTACCAGTGCAGGACATACGAGTGAGCTGTGTGCAACAGATGAGTCCTCCGAGAAGGGCTaGTCACAGGGCACTTCCATG +
Preference number: 5 (lower is better)
Translates to: TDACTSAGHTSELCATDESSEKG*SQGTSM
Trigger: CATGGAAGTGCCCTGTGACAAGCCCTTCTCGGAGGA...CTCATCTGTTGCACACAGCTCACTCGTATGTCCTGCACTGGTACATGCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TCAACCTCTATGAGCATTCGGTCAGCAAATGCCACGTCGGCCAGCCGGACACTGCTCGTCTCGGGATTCTaGTCTAACATCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: STSMSIRSANATSASRTLLVSGF*SNIFRI
Trigger: GATCCTGAAGATGTTAGACAAGAATCCCGAGACGAG...CAGTGTCCGGCTGGCCGACGTGGCATTTGCTGACCGAATGCTCATAGAGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp GCAAGAGAAAGCTGGGAAATGCAGCTTCCATTCTGGGCAGCCACATaGCCAACCAAGAACCAAGGACTGAATTGCTACCGGGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: ARESWEMQLPFWAAT*PTKNQGLNCYRENR
Trigger: TCTGTTCTCCCGGTAGCAATTCAGTCCTTGGTTCTTGGTTGGGCATGTGGCTGCCCAGAATGGAAGCTGCATTTCCCAGCTTTCTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 90 bp AGGAGGTCAAACACTGAAAGAAAAGACAAGAAGGTAAGGTGTAGCTaGCTGGCAAAGCAGCCGATGCCAAGGTCCCTCCCTGTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RRSNTERKDKKVRCS*LAKQPMPRSLPVLE
Trigger: CTCCAGAACAGGGAGGGACCTTGGCATCGGCTGCTTTGCCAGCCAGCTACACCTTACCTTCTTGTCTTTTCTTTCAGTGTTTGACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGCTGCGGGGGCGGCTGTaGCATGAGGGGTGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LNRRRNCITDACTSAGHTLRGRL*HEGWAS
Trigger: AGAGGCCCACCCCTCATGCAACAGCCGCCCCCGCAG...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TTGTCCATCCATGTTTCCAGGGCAGTGTCCGAGTCCTGCGTGACCCTGTGGGGGGAGTTTGCTCATCGCTaGTGCTACATTCAAAAACAA +
Preference number: 5 (lower is better)
Translates to: LSIHVSRAVSESCVTLWGEFAHR*CYIQKQ
Trigger: TTGTTTTTGAATGTAGCACAAGCGATGAGCAAACTC...CCCCCACAGGGTCACGCAGGACTCGGACACTGCCCTGGAAACATGGATGGACAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CCA 90 bp TGGATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCTTaGCGATATTTGTTGAATCTAACTGGATATTCTGGGCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: WIHCLAAQREAGSGA*RYLLNLTGYSGPGS
Trigger: AGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000158166.5
ENST00000573483.1
CDS-3UTR CAA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAATCTCACTCTGCAGCTaGTACTGGTTCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: RNVDPLTMGHIRLLALNRISLCS*YWFSCT
Trigger: CGTGCAGCTGAACCAGTACAAGCTGCAGAGTGAGAT...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp TTTCACATACACCGCTTGAGCTTACTTAACATGACCAGACCCAGCTaGAAGAGAAAGCTGGGAAATGCAGCTTCCATTCTGGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: FHIHRLSLLNMTRPS*KRKLGNAASILGSH
Trigger: GTGGCTGCCCAGAATGGAAGCTGCATTTCCCAGCTTTCTCTTGCAGCTGGGTCTGGTCATGTTAAGTAAGCTCAAGCGGTGTATGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp TTCCGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAACCCAAGGGTGCAACTaGATGTCTGGCACCCCAATT +
Preference number: 5 (lower is better)
Translates to: FRSVHFPDNAECETQSRKTQGCN*MSGTPI
Trigger: AATTGGGGTGCCAGACATCAAGTTGCACCCTTGGGT...TTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS GCA 90 bp TTGGCGATATTTGTTGAATCTAACTGGATATTCTGGGCCTGGTTCTaGAGGGCTGGGCAAGGGAATCCAGGGCTTCAGAACGTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: LAIFVESNWIFWAWF*RAGQGNPGLQNVCF
Trigger: AAAACACACGTTCTGAAGCCCTGGATTCCCTTGCCCAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS-3UTR CAA 90 bp CGTTCAGTCCACTTTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTTTCAGGATCAGGTCCTaGAGCTCCTCGCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: RSVHFPDNAECETQSRKVFRIRS*SSSLIS
Trigger: AGAAATCAGCGAGGAGCTCAAGGACCTGATCCTGAA...AACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAAAGTGGACTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TTAAATAGACGTAGAAACTGTATTACAGATGCATGTACCAGTGCAGGACATACGGGGAGCTCTGGGCTCTaGCCCCCTTCACCAAACCCT +
Preference number: 5 (lower is better)
Translates to: LNRRRNCITDACTSAGHTGSSGL*PPSPNP
Trigger: AGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCCC...CGTATGTCCTGCACTGGTACATGCATCTGTAATACAGTTTCTACGTCTATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp TTCCAGATAACGCCGAATGCGAAACACAGTCCAGGAAAGTTAGTTCCATCCACTTCCGACCTGGACAGTTaGTCCTTCGTTGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: FQITPNAKHSPGKLVPSTSDLDS*SFVVGV
Trigger: CACTCCTACAACGAAGGACAAACTGTCCAGGTCGGA...AGTGGATGGAACTAACTTTCCTGGACTGTGTTTCGCATTCGGCGTTATCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS-3UTR CAA 90 bp AGAAACGTGGACCCACTGACAATGGGGCACATTCGGCTCCTAGCCTTAAATAGAGAGTTTGCTCATCGCTaGTGCTACATTCAAAAACAA +
Preference number: 5 (lower is better)
Translates to: RNVDPLTMGHIRLLALNREFAHR*CYIQKQ
Trigger: TTGTTTTTGAATGTAGCACAAGCGATGAGCAAACTC...TCTATTTAAGGCTAGGAGCCGAATGTGCCCCATTGTCAGTGGGTCCACGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CCA 72 bp TGCACGCAGTCCTCTGCATCTGAGATGGCCACGTGGTaGGACTCGATGGTGGGCCTCCGCCAGGCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: CTQSSASEMATW*DSMVGLRQARG
Trigger: CCCCCGGGCCTGGCGGAGGCCCACCATCGAGTCCCACCACGTGGCCATCTCAGATGCAGAGGACTGCGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS CCA 72 bp AGCTGCACGCAGTCCTCTGCATCTGAGATGGCCACGTaGTGGGACTCGATGGTGGGCCTCCGCCAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SCTQSSASEMAT*WDSMVGLRQAR
Trigger: CCGGGCCTGGCGGAGGCCCACCATCGAGTCCCACCACGTGGCCATCTCAGATGCAGAGGACTGCGTGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS TCA 72 bp AAGCTGCCCCGCACTCACAGTACTCGAGGCCCAGGATaGCGTCCCGCAGGTAGAGGCGAGCTTGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: KLPRTHSTRGPG*RPAGRGELAPP
Trigger: CGGAGGAGCAAGCTCGCCTCTACCTGCGGGACGTCATCCTGGGCCTCGAGTACTGTGAGTGCGGGGCAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp CTGGCCGGAATCAGAAATGGCCTCGGGGGCCATGAATaGTGGGGTTCCCGCCGTGCTGGACAGCTGAGCGTC +
Preference number: 6 (lower is better)
Translates to: LAGIRNGLGGHE*WGSRRAGQLSV
Trigger: GACGCTCAGCTGTCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCATTTCTGATTCCGGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 72 bp GATGGGCCTCAGACCTCCCCACCCAACTCCAGGGAGTaGCCGGCAGTCCCTGGCCCACCAGTACTTACACCA +
Preference number: 6 (lower is better)
Translates to: DGPQTSPPNSRE*PAVPGPPVLTP
Trigger: TGGTGTAAGTACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAGGTCTGAGGCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS GCA 72 bp CTACCTGAGCGCGCAGCCCACGTGGATCCACTGTCTTaGTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LPERAAHVDPLS*CSEGSREWGLA
Trigger: CGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp ACCCACAGGACCAGACACGACGAAGGATCTGGCACATaGCCAGTGGAGTCCACCGCCCGCCCCACCCCACAA +
Preference number: 6 (lower is better)
Translates to: THRTRHDEGSGT*PVESTARPTPQ
Trigger: TTGTGGGGTGGGGCGGGCGGTGGACTCCACTGGGCATGTGCCAGATCCTTCGTCGTGTCTGGTCCTGTGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp ACTGCCAGGGATCACAGAGGCAGCTCTGGCCCGTGGTaGGGGGTCCACACCGTTTCTAGTAGGCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TARDHRGSSGPW*GVHTVSSRLWA
Trigger: GGCCCAGAGCCTACTAGAAACGGTGTGGACCCCCCACCACGGGCCAGAGCTGCCTCTGTGATCCCTGGCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS CCA 72 bp GACTCAGACCCACAGGACCAGACACGACGAAGGATCTaGCACATGCCCAGTGGAGTCCACCGCCCGCCCCAC +
Preference number: 6 (lower is better)
Translates to: DSDPQDQTRRRI*HMPSGVHRPPH
Trigger: GTGGGGCGGGCGGTGGACTCCACTGGGCATGTGCCAGATCCTTCGTCGTGTCTGGTCCTGTGGGTCTGAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS TCA 72 bp AGCTCTGGCCGGAATCAGAAATGGCCTCGGGGGCCATaGATGCTGGGGTTCCCGCCGTGCTGGACAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSGRNQKWPRGP*MLGFPPCWTAE
Trigger: CTCAGCTGTCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCATTTCTGATTCCGGCCAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 72 bp AGTCACATCGATGGCTGCCACCCGTTCTACCAGCTCTaGCCGAGGATCCTGGCAGCAGACAGCTGGACCCCC +
Preference number: 6 (lower is better)
Translates to: SHIDGCHPFYQL*PRILAADSWTP
Trigger: GGGGGTCCAGCTGTCTGCTGCCAGGATCCTCGGGCAGAGCTGGTAGAACGGGTGGCAGCCATCGATGTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS GCA 72 bp AACACTGAGCGCGCAGCCCACGTGGATCCACTGTCTTaGTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: NTERAAHVDPLS*CSEGSREWGLA
Trigger: CGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 72 bp GCCGGAATCAGAAATGGCCTCGGGGGCCATGAATGCTaGGGTTCCCGCCGTGCTGGACAGCTGAGCGTCGTT +
Preference number: 6 (lower is better)
Translates to: AGIRNGLGGHEC*GSRRAGQLSVV
Trigger: AACGACGCTCAGCTGTCCAGCACGGCGGGAACCCCAGCATTCATGGCCCCCGAGGCCATTTCTGATTCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS TCA 72 bp CGATCTTCTGGCAGTGCAAGTACTCGAGGCCCAGGATaGCGTCCCGCAGGTAGAGGCGAGCTTGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: RSSGSASTRGPG*RPAGRGELAPP
Trigger: CGGAGGAGCAAGCTCGCCTCTACCTGCGGGACGTCATCCTGGGCCTCGAGTACTTGCACTGCCAGAAGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS TCA 72 bp GCCATGAATGCTGGGGTTCCCGCCGTGCTGGACAGCTaGGCGTCGTTCCCCTCAAACTGGTTGCTGACGCCA +
Preference number: 6 (lower is better)
Translates to: AMNAGVPAVLDS*ASFPSNWLLTP
Trigger: TGGCGTCAGCAACCAGTTTGAGGGGAACGACGCTCAGCTGTCCAGCACGGCGGGAACCCCAGCATTCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 72 bp GGCACAGAGCTACAGTGTCTGGGAACCCATGCAGCCTaGTTCCTGCATCTACCTGAGCGCGCAGCCCACGTG +
Preference number: 6 (lower is better)
Translates to: GTELQCLGTHAA*FLHLPERAAHV
Trigger: CACGTGGGCTGCGCGCTCAGGTAGATGCAGGAAGCAGGCTGCATGGGTTCCCAGACACTGTAGCTCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp CTCCCCACCCAACTCCAGGGAGTGCCCGGCAGTCCCTaGCCCACCAGTACTTACACCAGTAGGTTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LPTQLQGVPGSP*PTSTYTSRFPG
Trigger: TCCAGGAAACCTACTGGTGTAAGTACTGGTGGGCCAGGGACTGCCGGGCACTCCCTGGAGTTGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 72 bp GGATGCAGCCTCGTCTTCCTGGACGCCGGGGAGCTCTaGGCTCTTGCCCCCTTCACCAAACCCTTCTTTCAC +
Preference number: 6 (lower is better)
Translates to: GCSLVFLDAGEL*ALAPFTKPFFH
Trigger: GTGAAAGAAGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCCCCGGCGTCCAGGAAGACGAGGCTGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CCA 72 bp CCTGCTTCCTGCATCTACCTGAGCGCGCAGCCCACGTaGATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: PASCIYLSAQPT*IHCLAAQREAG
Trigger: CCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGGTAGATGCAGGAAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp GCTCCCCAGCCTTGGCAGGCACCACGCTGTATTATCTaGCTGCCTAGATTCCTGTCCCTCCCACTAGGCCGT +
Preference number: 6 (lower is better)
Translates to: APQPWQAPRCII*LPRFLSLPLGR
Trigger: ACGGCCTAGTGGGAGGGACAGGAATCTAGGCAGGCAGATAATACAGCGTGGTGCCTGCCAAGGCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 90 bp CAGGATGCAGCCTCGTCTTCCTGGACGCCGGGGAGCTCTGGGCTCTaGCCCCCTTCACCAAACCCTTCTTTCACCAGTAGGTTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: QDAASSSWTPGSSGL*PPSPNPSFTSRFPG
Trigger: TCCAGGAAACCTACTGGTGAAAGAAGGGTTTGGTGAAGGGGGCAAGAGCCCAGAGCTCCCCGGCGTCCAGGAAGACGAGGCTGCATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS TCA 72 bp TGTCCCCAGGAGGTCAGTGCATTTACACCGCCCACCTaGAGGTCATACATGTCCCAAGGGAGCCCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: CPQEVSAFTPPT*RSYMSQGSPWA
Trigger: GGCCCAAGGGCTCCCTTGGGACATGTATGACCTTCAGGTGGGCGGTGTAAATGCACTGACCTCCTGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp ACCATCTGCCTCCTCCAAGTGAGTCACATCGATGGCTaGCACCCGTTCTACCAGCTCTGCCCGAGGATCCTG +
Preference number: 6 (lower is better)
Translates to: TICLLQVSHIDG*HPFYQLCPRIL
Trigger: CAGGATCCTCGGGCAGAGCTGGTAGAACGGGTGGCAGCCATCGATGTGACTCACTTGGAGGAGGCAGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS CCA 72 bp TTCTCAGGAGGTCAAACACTGAGCGCGCAGCCCACGTaGATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: FSGGQTLSAQPT*IHCLAAQREAG
Trigger: CCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCACGTGGGCTGCGCGCTCAGTGTTTGACCTCCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 72 bp CCTGGAGCAGACATGGATCGCTCTTCCCTCCGTGCTTaGGGCTCAAACGGGTTCCCAAAGGAACGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: PGADMDRSSLRA*GSNGFPKERFL
Trigger: GAGGAAGCGTTCCTTTGGGAACCCGTTTGAGCCCCAAGCACGGAGGGAAGAGCGATCCATGTCTGCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CCA 72 bp CCTGCTGGTTCCTCATTGGGACTGGGAGCTCCTGGATaGCAAGCACTGTGCCTGATTCGTCCAGCACACAGC +
Preference number: 6 (lower is better)
Translates to: PAGSSLGLGAPG*QALCLIRPAHS
Trigger: GCTGTGTGCTGGACGAATCAGGCACAGTGCTTGCCATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 90 bp GCGATCTTCACGTGCCCATCATCCCCCAGGAGCAGGTTGGATGGCTaGATGTCCCTGTGGACGATCTTCTGGCAGTGCAAGTACTCGAGG +
Preference number: 6 (lower is better)
Translates to: AIFTCPSSPRSRLDG*MSLWTIFWQCKYSR
Trigger: CCTCGAGTACTTGCACTGCCAGAAGATCGTCCACAGGGACATCAAGCCATCCAACCTGCTCCTGGGGGATGATGGGCACGTGAAGATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CAA 90 bp CCCCCTCCATTGCTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTTGTaGGGAACCTGCTGGTTCCTCATTGGGACTGGGAGCTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: PPPLLQSRGFFCVAL*GTCWFLIGTGSSWM
Trigger: CATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAGCAATGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp GTCCACACCGTTTCTAGTAGGCTCTGGGCCACCATCTaGCTCCTCCAAGTGAGTCACATCGATGGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: VHTVSSRLWATI*LLQVSHIDGCH
Trigger: GTGGCAGCCATCGATGTGACTCACTTGGAGGAGGCAGATGGTGGCCCAGAGCCTACTAGAAACGGTGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS GCA 72 bp AACTGGTTGCTGACGCCAAAGTCGGCGATCTTCACGTaGCCATCATCCCCCAGGAGCAGGTTGGATGGCTTG +
Preference number: 6 (lower is better)
Translates to: NWLLTPKSAIFT*PSSPRSRLDGL
Trigger: CAAGCCATCCAACCTGCTCCTGGGGGATGATGGGCACGTGAAGATCGCCGACTTTGGCGTCAGCAACCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 72 bp GGGTCTGCTATGGACCTGTCTCATCTGATCCTCAGGTaGCAGGTGAGAACCATCAGCATCAGCATGGGGCCC +
Preference number: 6 (lower is better)
Translates to: GSAMDLSHLILR*QVRTISISMGP
Trigger: GGGCCCCATGCTGATGCTGATGGTTCTCACCTGGCACCTGAGGATCAGATGAGACAGGTCCATAGCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp CTTCACGTGCCCATCATCCCCCAGGAGCAGGTTGGATaGCTTGATGTCCCTGTGGACGATCTTCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LHVPIIPQEQVG*LDVPVDDLLAV
Trigger: CACTGCCAGAAGATCGTCCACAGGGACATCAAGCCATCCAACCTGCTCCTGGGGGATGATGGGCACGTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CCA 72 bp GGAACCTGCTGGTTCCTCATTGGGACTGGGAGCTCCTaGATGGCAAGCACTGTGCCTGATTCGTCCAGCACA +
Preference number: 6 (lower is better)
Translates to: GTCWFLIGTGSS*MASTVPDSSST
Trigger: TGTGCTGGACGAATCAGGCACAGTGCTTGCCATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp AGGGGGTTCTTCTGCGTAGCCTTGTTGGGAACCTGCTaGTTCCTCATTGGGACTGGGAGCTCCTGGATGGCA +
Preference number: 6 (lower is better)
Translates to: RGFFCVALLGTC*FLIGTGSSWMA
Trigger: TGCCATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS TCA 72 bp TGGACAGCTGAGCGTCGTTCCCCTCAAACTGGTTGCTaGCGCCAAAGTCGGCGATCTTCACGTGCCCATCAT +
Preference number: 6 (lower is better)
Translates to: WTAERRSPQTGC*RQSRRSSRAHH
Trigger: ATGATGGGCACGTGAAGATCGCCGACTTTGGCGTCAGCAACCAGTTTGAGGGGAACGACGCTCAGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS GCA 72 bp TCAAGGGGGTTCTTCTGCGTAGCCTTGTTGGGAACCTaGTGGTTCCTCATTGGGACTGGGAGCTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: SRGFFCVALLGT*WFLIGTGSSWM
Trigger: CATCCAGGAGCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp TTCCAGCATCATCTTTCACTAACCACGGCCCTCCTCTaGCCACTGGAGGCTTCAGCCAGACTCCACTTCTCC +
Preference number: 6 (lower is better)
Translates to: FQHHLSLTTALL*PLEASARLHFS
Trigger: GGAGAAGTGGAGTCTGGCTGAAGCCTCCAGTGGGCAGAGGAGGGCCGTGGTTAGTGAAAGATGATGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 90 bp CCCCCTCCATTGCTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTTGTaGGGAACTCTCCACTGCAGCCACACCACAGCTTCCCAAATTGCA +
Preference number: 6 (lower is better)
Translates to: PPPLLQSRGFFCVAL*GTLHCSHTTASQIA
Trigger: TGCAATTTGGGAAGCTGTGGTGTGGCTGCAGTGGAGAGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAGCAATGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS CAA 90 bp CTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTTGTaGAATCTAACTGGATATTCTGGGCCTGGTTCTGCAGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LAAQREAGSGAWRYL*NLTGYSGPGSAGLG
Trigger: GCCCAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp CATGACCAGACCCAGCTGCAAGAGAAAGCTGGGAAATaGAGCTTCCATTCTGGGCAGCCACATGCCCAACCA +
Preference number: 6 (lower is better)
Translates to: HDQTQLQEKAGK*SFHSGQPHAQP
Trigger: TGGTTGGGCATGTGGCTGCCCAGAATGGAAGCTGCATTTCCCAGCTTTCTCTTGCAGCTGGGTCTGGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp CCAGTACTTACACCAGTAGGTTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTGCTTGGGGCTCAAACG +
Preference number: 6 (lower is better)
Translates to: PVLTPVGFLEQT*IALPSVLGAQT
Trigger: CGTTTGAGCCCCAAGCACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAAACCTACTGGTGTAAGTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 72 bp ACCCTTCTTTCACCAGTAGGTTTCCTGGAGCAGACATaGATCGCTCTTCCCTCCGTGCTTGGGGCTCAAACG +
Preference number: 6 (lower is better)
Translates to: TLLSPVGFLEQT*IALPSVLGAQT
Trigger: CGTTTGAGCCCCAAGCACGGAGGGAAGAGCGATCCATGTCTGCTCCAGGAAACCTACTGGTGAAAGAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CCA 72 bp AAGACCTCAGGGGAGGGATTCCCAGCCCTCATGCTGTaGCCCGGACAGTGTTTCCAGCATCATCTTTCACTA +
Preference number: 6 (lower is better)
Translates to: KTSGEGFPALML*PGQCFQHHLSL
Trigger: TAGTGAAAGATGATGCTGGAAACACTGTCCGGGCCACAGCATGAGGGCTGGGAATCCCTCCCCTGAGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 72 bp CCATTGCTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTaGTTGGGAACTCTCCACTGCAGCCACACCACAGCT +
Preference number: 6 (lower is better)
Translates to: PLLQSRGFFCVA*LGTLHCSHTTA
Trigger: AGCTGTGGTGTGGCTGCAGTGGAGAGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAGCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS CAA 72 bp TTGCTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTTGTaGGGAACCTGCTGGTTCCTCATTGGGACTGGGAGC +
Preference number: 6 (lower is better)
Translates to: LLQSRGFFCVAL*GTCWFLIGTGS
Trigger: GCTCCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 72 bp CCATTGCTTCAGTCAAGGGGGTTCTTCTGCGTAGCCTaGTTGGGAACCTGCTGGTTCCTCATTGGGACTGGG +
Preference number: 6 (lower is better)
Translates to: PLLQSRGFFCVA*LGTCWFLIGTG
Trigger: CCCAGTCCCAATGAGGAACCAGCAGGTTCCCAACAAGGCTACGCAGAAGAACCCCCTTGACTGAAGCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS TCA 72 bp CCAGCCCTTTGGAAGGCTGAGGTGGAGCGTATCATTTaGGCCCAGGAGTTTGAGAACAGCCTGGTCCACATA +
Preference number: 6 (lower is better)
Translates to: PALWKAEVERII*AQEFENSLVHI
Trigger: TATGTGGACCAGGCTGTTCTCAAACTCCTGGGCTCAAATGATACGCTCCACCTCAGCCTTCCAAAGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 90 bp TGTCTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTaGTTGAATCTAACTGGATATTCTGGGCCTGGTTCTGCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: CLAAQREAGSGAWRY*LNLTGYSGPGSAGP
Trigger: TGGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CAA 90 bp TCCTCGCTGATTTCTGGCTCCTCAGGAAACACCACGGGCTCATTCTaGATCTTCCTGTGGAGGGCCAGGATGAAATCGTCGATGAATGGG +
Preference number: 6 (lower is better)
Translates to: SSLISGSSGNTTGSF*IFLWRARMKSSMNG
Trigger: CCCATTCATCGACGATTTCATCCTGGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGGTGTTTCCTGAGGAGCCAGAAATCAGCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CAA 90 bp TGTCTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTaGTTGAATCTAACTGGATATTCTGGGCCTGGTTCTGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: CLAAQREAGSGAWRY*LNLTGYSGPGSAGL
Trigger: CAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp GGGTTCTTCTGCGTAGCCTTGTTGGGAACTCTCCACTaGAGCCACACCACAGCTTCCCAAATTGCATACTCT +
Preference number: 6 (lower is better)
Translates to: GFFCVALLGTLH*SHTTASQIAYS
Trigger: AGAGTATGCAATTTGGGAAGCTGTGGTGTGGCTGCAGTGGAGAGTTCCCAACAAGGCTACGCAGAAGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381769.6
CDS CCA 72 bp CTGGTTCTGCAGGGCCAAATAGAGGTTGTCCTCAGCTaGGTCATCCAGGACCTCGATCAGTTTGACCACATT +
Preference number: 6 (lower is better)
Translates to: LVLQGQIEVVLS*VIQDLDQFDHI
Trigger: AATGTGGTCAAACTGATCGAGGTCCTGGATGACCCAGCTGAGGACAACCTCTATTTGGCCCTGCAGAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CCA 72 bp GCCAGGTCACTCACCCAAATAGAGGTTGTCCTCAGCTaGGTCATCCAGGACCTCGATCAGTTTGACCACATT +
Preference number: 6 (lower is better)
Translates to: ARSLTQIEVVLS*VIQDLDQFDHI
Trigger: AATGTGGTCAAACTGATCGAGGTCCTGGATGACCCAGCTGAGGACAACCTCTATTTGGGTGAGTGACCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 72 bp ATTTCTGGCTCCTCAGGAAACACCACGGGCTCATTCTaGATCTTCCTGTGGAGGGCCAGGATGAAATCGTCG +
Preference number: 6 (lower is better)
Translates to: ISGSSGNTTGSF*IFLWRARMKSS
Trigger: CGACGATTTCATCCTGGCCCTCCACAGGAAGATCAAGAATGAGCCCGTGGTGTTTCCTGAGGAGCCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CAA 90 bp CTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTTGTaGAATCTAACTGGATATTCTGGGCCTGGTTCTGCAGGGCCAAAT +
Preference number: 6 (lower is better)
Translates to: LAAQREAGSGAWRYL*NLTGYSGPGSAGPN
Trigger: ATTTGGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000158166.5
CDS CAA 90 bp GTGGATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGGAGTGGGGCTaGGCGATATTTGTTGAATCTAACTGGATATTCTGGGCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: VDPLSCCSEGSREWG*AIFVESNWIFWAWF
Trigger: GAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000158166.5
ENST00000573483.1
CDS CAA 90 bp ATTCTCGTCTCGGGATTCTTGTCTAACATCTTCAGGATCAGGTCCTaGAGCTCCTCGCTGATTTCTGGCTCCTCAGGAAACACCACGGGC +
Preference number: 6 (lower is better)
Translates to: ILVSGFLSNIFRIRS*SSSLISGSSGNTTG
Trigger: GCCCGTGGTGTTTCCTGAGGAGCCAGAAATCAGCGAGGAGCTCAAGGACCTGATCCTGAAGATGTTAGACAAGAATCCCGAGACGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS CAA 90 bp TCCATTCTGGGCAGCCACATGCCCAACCAAGAACCAAGGACTGAATaGCTACCGGGAGAACAGATATCCGGAACAACTAGTGGACTCCAC +
Preference number: 6 (lower is better)
Translates to: SILGSHMPNQEPRTE*LPGEQISGTTSGLH
Trigger: GTGGAGTCCACTAGTTGTTCCGGATATCTGTTCTCCCGGTAGCAATTCAGTCCTTGGTTCTTGGTTGGGCATGTGGCTGCCCAGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp GCAGCCACATGCCCAACCAAGAACCAAGGACTGAATTaGTACCGGGAGAACAGATATCCGGAACAACTAGTG +
Preference number: 6 (lower is better)
Translates to: AATCPTKNQGLN*YRENRYPEQLV
Trigger: CACTAGTTGTTCCGGATATCTGTTCTCCCGGTAGCAATTCAGTCCTTGGTTCTTGGTTGGGCATGTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp TTTGTTGAATCTAACTGGATATTCTGGGCCTGGTTCTaGAGGGCTGGGCAAGGGAATCCAGGGCTTCAGAAC +
Preference number: 6 (lower is better)
Translates to: FVESNWIFWAWF*RAGQGNPGLQN
Trigger: GTTCTGAAGCCCTGGATTCCCTTGCCCAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp GGCTTGGCGATATTTGTTGAATCTAACTGGATATTCTaGGCCTGGTTCTGCAGGGCTGGGCAAGGGAATCCA +
Preference number: 6 (lower is better)
Translates to: GLAIFVESNWIF*AWFCRAGQGNP
Trigger: TGGATTCCCTTGCCCAGCCCTGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp AACACTGAAAGAAAAGACAAGAAGGTAAGGTGTAGCTaGCTGGCAAAGCAGCCGATGCCAAGGTCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: NTERKDKKVRCS*LAKQPMPRSLP
Trigger: AGGGAGGGACCTTGGCATCGGCTGCTTTGCCAGCCAGCTACACCTTACCTTCTTGTCTTTTCTTTCAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CAA 72 bp CAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTTGTaGAATCTAACTGGATATTCTGGGCCTGGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: QREAGSGAWRYL*NLTGYSGPGSA
Trigger: TGCAGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000158166.5
ENST00000573483.1
CDS CAA 72 bp GCTCAGAGGGAAGCAGGGAGTGGGGCTTGGCGATATTaGTTGAATCTAACTGGATATTCTGGGCCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: AQREAGSGAWRY*LNLTGYSGPGS
Trigger: AGAACCAGGCCCAGAATATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000158166.5
ENST00000573483.1
CDS CAA 72 bp GGCAGCCACATGCCCAACCAAGAACCAAGGACTGAATaGCTACCGGGAGAACAGATATCCGGAACAACTAGT +
Preference number: 6 (lower is better)
Translates to: GSHMPNQEPRTE*LPGEQISGTTS
Trigger: ACTAGTTGTTCCGGATATCTGTTCTCCCGGTAGCAATTCAGTCCTTGGTTCTTGGTTGGGCATGTGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS GCA 72 bp GACCCTCTCGGGGGAGGGCGACGTGGAAAGCCATACTaGTTCAGTAACTTCTTTTTGGAAAGGACTTTCATT +
Preference number: 6 (lower is better)
Translates to: DPLGGGRRGKPY*FSNFFLERTFI
Trigger: AATGAAAGTCCTTTCCAAAAAGAAGTTACTGAAGCAGTATGGCTTTCCACGTCGCCCTCCCCCGAGAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
ENST00000573483.1
CDS GCA 72 bp CACCGCTTGAGCTTACTTAACATGACCAGACCCAGCTaGAAGAGAAAGCTGGGAAATGCAGCTTCCATTCTG +
Preference number: 6 (lower is better)
Translates to: HRLSLLNMTRPS*KRKLGNAASIL
Trigger: CAGAATGGAAGCTGCATTTCCCAGCTTTCTCTTGCAGCTGGGTCTGGTCATGTTAAGTAAGCTCAAGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp GATCCACTGTCTTGCTGCTCAGAGGGAAGCAGGGAGTaGGGCTTGGCGATATTTGTTGAATCTAACTGGATA +
Preference number: 6 (lower is better)
Translates to: DPLSCCSEGSRE*GLAIFVESNWI
Trigger: TATCCAGTTAGATTCAACAAATATCGCCAAGCCCCACTCCCTGCTTCCCTCTGAGCAGCAAGACAGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000158166.5
ENST00000573483.1
CDS CCA 72 bp CAGGAGGTCAAACACCAAATAGAGGTTGTCCTCAGCTaGGTCATCCAGGACCTCGATCAGTTTGACCACATT +
Preference number: 6 (lower is better)
Translates to: QEVKHQIEVVLS*VIQDLDQFDHI
Trigger: AATGTGGTCAAACTGATCGAGGTCCTGGATGACCCAGCTGAGGACAACCTCTATTTGGTGTTTGACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348335.7
ENST00000381769.6
CDS CAA 72 bp TCGGGATTCTTGTCTAACATCTTCAGGATCAGGTCCTaGAGCTCCTCGCTGATTTCTGGCTCCTCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: SGFLSNIFRIRS*SSSLISGSSGN
Trigger: GTTTCCTGAGGAGCCAGAAATCAGCGAGGAGCTCAAGGACCTGATCCTGAAGATGTTAGACAAGAATCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000158166.5
ENST00000348335.7
ENST00000381769.6
CDS TCA 72 bp ACACCACTAGTATCCCTGTTTTATAGGTGGGAAAACTaGGGCACAGAGCTACAGTGTCTGGGAACCCATGCA +
Preference number: 6 (lower is better)
Translates to: TPLVSLFYRWEN*GTELQCLGTHA
Trigger: TGCATGGGTTCCCAGACACTGTAGCTCTGTGCCTCAGTTTTCCCACCTATAAAACAGGGATACTAGTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS TCA 72 bp GCCTGTCGCATGGCACAGGTGCTCAGTGGATGTTGTTaGATGAATAATTCCAGCAACTTGAGTGTGGCTTTT +
Preference number: 6 (lower is better)
Translates to: ACRMAQVLSGCC*MNNSSNLSVAF
Trigger: AAAAGCCACACTCAAGTTGCTGGAATTATTCATTCAACAACATCCACTGAGCACCTGTGCCATGCGACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573483.1
CDS CCA 72 bp GCTCTCTTTTCAGGAAAGTTCCCAGAAGTTGCCACGTaGCACTTTCACATACACCGCTTGAGCTTACTTAAC +
Preference number: 6 (lower is better)
Translates to: ALFSGKFPEVAT*HFHIHRLSLLN
Trigger: GTTAAGTAAGCTCAAGCGGTGTATGTGAAAGTGCCACGTGGCAACTTCTGGGAACTTTCCTGAAAAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573483.1