Pregenerated sensors for CAMK2N2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163888Ensembl transcript IDs: ENST00000296238.4
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTaGCCGCGCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACC | + |
|
Preference number: 1 (lower is better) Translates to: LKWVESSCKYAAKHP*PRAVRHRRPPGLQT Trigger: GGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CCA 90 bp | AGGGGTGGGGGCGAGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTaGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCG | + |
|
Preference number: 1 (lower is better) Translates to: RGGGEERPGGLGSSG*KAHASTQPNIPGRA Trigger: CGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCGCCCCCACCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR GCA 90 bp | CGAGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATaGAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCCGACAC | + |
|
Preference number: 1 (lower is better) Translates to: RGTARRTGLKWVESS*KYAAKHPWPRAVRH Trigger: GTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CCA 90 bp | AGACAGGGGTGGGGGCGAGGAACGGCCCGGAGGACTGGGCTCAAGTaGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCG | + |
|
Preference number: 1 (lower is better) Translates to: RQGWGRGTARRTGLK*VESSCKYAAKHPWP Trigger: CGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCGCCCCCACCCCTGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CCA 90 bp | GGGTCACGCCAGACAGGGGTGGGGGCGAGGAACGGCCCGGAGGACTaGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACA | + |
|
Preference number: 1 (lower is better) Translates to: GSRQTGVGARNGPED*AQVGGKLMQVRSQT Trigger: TGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCGCCCCCACCCCTGTCTGGCGTGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR TCA 90 bp | GGTACAGTGAGGATGGAGGAACATTTACGAAGGGCACCCCTGGGTTaGGAACATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: GTVRMEEHLRRAPLG*EHLRGHRCHPKVQS Trigger: GCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTAAATGTTCCTCCATCCTCACTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR CCA 90 bp | GCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAGGGGTTCCGGTGTGCGGGGTaGGGCTGCGGCCCGAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ARSDTGGRPVCRPDWPEGFRCAG*GCGPRF Trigger: AAACCTCGGGCCGCAGCCCCACCCCGCACACCGGAA...CCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR TCA 90 bp | CATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAGCAGTCCCCATTTGGGTCGGCCGCCGTGGTGCTaGAGCGGACAGCTCCGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: HLRGHRCHPKVQSSPHLGRPPWC*SGQLRS Trigger: ACTCCGGAGCTGTCCGCTTCAGCACCACGGCGGCCG...ACCCAAATGGGGACTGCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCCCCGAGGTTTTAAAGTaGATGAGCGCGGCGGCGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QVGGKLMQVRSQTSLAARPEVLK*MSAAAG Trigger: ACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGG...GCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAAATACAAATGTGCTGAGGAAGTCCCTTAGAAAGAGGCTGAGGCTGGGGGGCGGCCGCCCGGTCTaGAGACCAGACTGGCCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YKNTNVLRKSLRKRLRLGGGRPV*RPDWPE Trigger: CTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCC...CCCCAGCCTCAGCCTCTTTCTAAGGGACTTCCTCAGCACATTTGTATTTTTATA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGAACATTTACGAAGGGCACCCCTGGGTTGAGAACATCTCCGGGGCCACAGATCTGGGCTCAAGTGGGTaGAAAGCTCATGCAAGTACG | + |
|
Preference number: 2 (lower is better) Translates to: RNIYEGHPWVENISGATDLGSSG*KAHAST Trigger: CGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAG...ATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTAAATGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAGCAGTCCCCATTTGGGTAGGACTGGGCTCAAGTaGGTGGAAAGCTCATGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLRGHRCHPKVQSSPHLGRTGLK*VESSCK Trigger: CTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCT...ACCCAAATGGGGACTGCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CAA 90 bp | TGGTACAGTGAGGATGGAGGAACATTTACGAAGGGCACCCCTGGGTaGAGAACATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: WYSEDGGTFTKGTPG*RTSPGPQMSSKGSE Trigger: CTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTAAATGTTCCTCCATCCTCACTGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAAATACAAATGTGCTGAGGAAGTCCCTTAGAAAGAGGCTGAGGCTGGGGTGGGTGGAAAGCTCATaGAAGTACGCAGCCAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: YKNTNVLRKSLRKRLRLGWVESS*KYAAKH Trigger: ATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCA...CCCCAGCCTCAGCCTCTTTCTAAGGGACTTCCTCAGCACATTTGTATTTTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CCA 72 bp | GTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTaGCCGCGCGCGGTCCGACACCGGCGGCCGCCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: VESSCKYAAKHP*PRAVRHRRPPG Trigger: ACCGGGCGGCCGCCGGTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CCA 72 bp | GGCGAGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTaGAAAGCTCATGCAAGTACGCAGCCAAACATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GEERPGGLGSSG*KAHASTQPNIP Trigger: AGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CCA 72 bp | TGGGGGCGAGGAACGGCCCGGAGGACTGGGCTCAAGTaGGTGGAAAGCTCATGCAAGTACGCAGCCAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: WGRGTARRTGLK*VESSCKYAAKH Trigger: ATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAGCAGTCCCCATTTGGGTAGACTGGCCATGTGGTaGGTAACCGTGTCGGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLRGHRCHPKVQSSPHLGRLAMW*VTVSGA Trigger: AGCCCCCGACACGGTTACCAACCACATGGCCAGTCT...ACCCAAATGGGGACTGCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAGCAGTCCCCATTTGGGTATCGGATCTGGGCCCTaGGAAGGTGATGATACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLRGHRCHPKVQSSPHLGIGSGP*EGDDTL Trigger: CAAGGTATCATCACCTTCCAAGGGCCCAGATCCGAT...ACCCAAATGGGGACTGCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR TCA 72 bp | AGGATGGAGGAACATTTACGAAGGGCACCCCTGGGTTaGGAACATCTCCGGGGCCACAGATGTCATCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RMEEHLRRAPLG*EHLRGHRCHPK Trigger: CTTTGGATGACATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTAAATGTTCCTCCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAGGGGGGGGGTCGCTTGGCCTaGTTGCCCGCGAAGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSDTGGRPVCRPDWPEGGGRLA*LPAKKE Trigger: CTCCTTCTTCGCGGGCAACCAGGCCAAGCGACCCCC...CCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGC 74% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | CATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCCGACACCGGCGGCGGCGGCCGCCCGGTCTaGAGACCAGACTGGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HASTQPNIPGRARSDTGGGGRPV*RPDWPE Trigger: CTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCC...GCCGCCGGTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAGGGGAACGGCCCGGAGGACTaGGCTCAAGTGGGTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSDTGGRPVCRPDWPEGNGPED*AQVGGK Trigger: CTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTT...CCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | CATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCCGACACCGGCGGCTTCCGGTGTGCGGGGTaGGGCTGCGGCCCGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HASTQPNIPGRARSDTGGFRCAG*GCGPRF Trigger: AAACCTCGGGCCGCAGCCCCACCCCGCACACCGGAA...GCCGCCGGTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCTGCGGCCCGAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCAGCCAAACATCCCTaGCCGCGCGCGGTCCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGAAARGFKVHERGGGFRAAKHP*PRAVRH Trigger: GTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGC...CCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGGCCGCAGCCCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | GAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGGTCCGCGCCGCCGAGCCGGCGGAAGGATaGAGTCATGCAGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVLKCMSAAAGSGRVRAAEPAEG*SHAASG Trigger: CCCGGATGCTGCATGACTTCATCCTTCCGCCGGCTC...GGCGGCGCGGACCCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | CATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCCGACACCGGCGGCGAGCGTGGCCGAGACTaGGGGGAGGGCAGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HASTQPNIPGRARSDTGGERGRD*GEGRNH Trigger: ATGGTTCCTGCCCTCCCCTCAGTCTCGGCCACGCTC...GCCGCCGGTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAGGGGCTGGGCTCAAGTGGGTaGAAAGCTCATGCAAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: ARSDTGGRPVCRPDWPEGLGSSG*KAHAST Trigger: CGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAG...CCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCGGCCCGAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGTCCTGGGGTCAGGCCTaGGCAGACTGGCCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRPEVLKCMSAAAGSGRSWGQA*ADWPCG Trigger: ACCACATGGCCAGTCTGCCCAGGCCTGACCCCAGGA...CCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGGCCGCAGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | AGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGGGGCGGCGGGCTTGCTaGCGGACCGGCCCTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGWKAHASTQPNIPGRARGRRAC*RTGPTS Trigger: TGAGGTAGGGCCGGTCCGGCAGCAAGCCCGCCGCCC...CCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGGTCCGCGCCGCCGGCAGACTGGCCATGTaGTTGGTAACCGTGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVLKCMSAAAGSGRVRAAGRLAM*LVTVSG Trigger: CCCCGACACGGTTACCAACCACATGGCCAGTCTGCC...GGCGGCGCGGACCCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | GCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAGGGGACACTCCTGGTACAGTaGGGATGGAGGAACATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSDTGGRPVCRPDWPEGTLLVQ*GWRNIY Trigger: GTAAATGTTCCTCCATCCTCACTGTACCAGGAGTGT...CCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCCACGCCAGACAGGGGTaGGGGCGAGGAACGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRHARQG*GRGTAR Trigger: CCGGGCCGTTCCTCGCCCCCACCCCTGTCTGGCGTG...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCGGCCCGAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGTACGAAGGGCACCCCTaGGTTGAGAACATCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRPEVLKCMSAAAGSGRYEGHP*VENISG Trigger: CCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTA...CCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGGCCGCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCCGGCCGCCGTGGTGCTaGAGCGGACAGCTCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRRPPWC*SGQLRS Trigger: ACTCCGGAGCTGTCCGCTTCAGCACCACGGCGGCCG...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | AGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGAGGGCACCCCTGGGTTaGGAACATCTCCGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGWKAHASTQPNIPGRARRAPLG*EHLRGH Trigger: GTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCT...CCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGAGCCCTCGGGGTCTaGGCCGAAGCGGCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVGGKLMQVRSQTSLAARGALGV*AEAAHL Trigger: AAGATGGGCCGCTTCGGCGCAGACCCCGAGGGCTCC...GCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | CATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCCGACACCGGCGGCAACACCCATCCTATCTaGCAGGCGCAGAAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HASTQPNIPGRARSDTGGNTHPI*QAQKSV Trigger: CACGCTCTTCTGCGCCTGGCAGATAGGATGGGTGTT...GCCGCCGGTGTCGGACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCGGCCCGAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGAGGACTGGGCTCAAGTaGGTGGAAAGCTCATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRPEVLKCMSAAAGSGRRTGLK*VESSCK Trigger: CTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCT...CCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGGCCGCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | AGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGCGATCACCACTCGCTTaGCTCGGCCGATCTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGWKAHASTQPNIPGRARRSPLA*LGRSGP Trigger: TGGGCCAGATCGGCCGAGCCAAGCGAGTGGTGATCG...CCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCCCCTTAGAAAGAGGCTaGGGCTGGGGTCACGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVESSCKYAAKHPWPRAVPLERG*GWGHAR Trigger: TCTGGCGTGACCCCAGCCTCAGCCTCTTTCTAAGGG...GACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | CCGCGCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAAAAATACAAATGTGCTaGGGAAGTCCCTTAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRAVRHRRPPGLQTRLAGKIQMC*GSPLER Trigger: TCTTTCTAAGGGACTTCCTCAGCACATTTGTATTTT...TCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGCGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | GAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCCTGCAGGCGGCAGCTaGAGGAGAGGTCGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EDWAQVGGKLMQVRSQTSPAGGS*RRGRSP Trigger: AGGGCTCCGACCTCTCCTTCAGCTGCCGCCTGCAGG...GGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCGTCGCTTGGCCTGGTTaGCCGCGAAGAAGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRVAWPG*PRRRSW Trigger: CCAACTCCTTCTTCGCGGGCAACCAGGCCAAGCGAC...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAAGGAGTTGGTGTCCTaGAGGCGGCAGCTGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRKELVS*RRQLKE Trigger: CTCCTTCAGCTGCCGCCTGCAGGACACCAACTCCTT...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | AGGAACATTTACGAAGGGCACCCCTGGGTTGAGAACATCTCCGGGGCCACAGATAGGCGCAGAAGAGCGTaGCCGAGACTGAGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNIYEGHPWVENISGATDRRRRA*PRLRGG Trigger: CCCTCCCCTCAGTCTCGGCCACGCTCTTCTGCGCCT...ATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTAAATGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | GAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCCCGAGGTTTTAAAGTaGATGAGCGCGGCGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EDWAQVGGKLMQVRSQTSPEVLK*MSAAAG Trigger: ACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGG...GGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCTCGGATCTGGGCCCTTaGAAGGTGATGATACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRSDLGP*KVMIPW Trigger: CCAAGGTATCATCACCTTCCAAGGGCCCAGATCCGA...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | CATCTCCGGGGCCACAGATGTCATCCAAAGGTTCAGAGCAGTCCCCATTTGGGTAGAGCAGTCCCCATTTaGGTTCCCAGGGGCAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: HLRGHRCHPKVQSSPHLGRAVPI*VPRGKT Trigger: CGTCTTGCCCCTGGGAACCCAAATGGGGACTGCTCT...ACCCAAATGGGGACTGCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR GCA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCTGGGTGGAAAGCTCATaGAAGTACGCAGCCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRWVESS*KYAAKH Trigger: ATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCA...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR TCA 90 bp | GAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCGGAGGGCAGGAACCATaGGCAGAGCCAGTAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EDWAQVGGKLMQVRSQTSGGQEP*AEPVNK Trigger: TTTGTTTACTGGCTCTGCTCATGGTTCCTGCCCTCC...GGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | GAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCAAGGTGATGATACCTTaGGGAGAAGGGGTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EDWAQVGGKLMQVRSQTSKVMIP*GEGVCQ Trigger: CTGGCAGACCCCTTCTCCCCAAGGTATCATCACCTT...GGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCTTATTCACACACTCCTaGTACAGTGAGGATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVGGKLMQVRSQTSLAARLFTHS*YSEDGG Trigger: TCCTCCATCCTCACTGTACCAGGAGTGTGTGAATAA...GCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| 3UTR CAA 72 bp | GAGGATGGAGGAACATTTACGAAGGGCACCCCTGGGTaGAGAACATCTCCGGGGCCACAGATGTCATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EDGGTFTKGTPG*RTSPGPQMSSK Trigger: TTTGGATGACATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTTCGTAAATGTTCCTCCATCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS CCA 90 bp | CGAAGCGGCCCATCTTGTCTTCGCTGTAGGGCAGGATCTCGGACATaGCGGGCGCGGGGTGGGCGCGGGGCGGGAGCGGGACTGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGPSCLRCRAGSRT*RARGGRGAGAGLRR Trigger: CCGCCGCAGTCCCGCTCCCGCCCCGCGCCCACCCCGCGCCCGCCATGTCCGAGATCCTGCCCTACAGCGAAGACAAGATGGGCCGCTTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | GCGCGGTCCGACACCGGCGGCCGCCCGGTCTGCAGACCAGACTGGCCGGAGGGGAAGGGCACCCCTGGGTaGAGAACATCTCCGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSDTGGRPVCRPDWPEGKGTPG*RTSPGP Trigger: TGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCTT...CCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | GAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGGTCCGCGCCGCCGGTCGCTTGGCCTGGTaGCCCGCGAAGAAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVLKCMSAAAGSGRVRAAGRLAW*PAKKEL Trigger: CAACTCCTTCTTCGCGGGCAACCAGGCCAAGCGACC...GGCGGCGCGGACCCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | GGGCTGCGGCCCGAGGTTTTAAAGTGCATGAGCGCGGCGGCGGGTTCCGGGCGGCAGAGCAGTCCCCATTaGGGTTCCCAGGGGCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLRPEVLKCMSAAAGSGRQSSPH*GSQGQD Trigger: GTCTTGCCCCTGGGAACCCAAATGGGGACTGCTCTG...CCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAACCTCGGGCCGCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | AGGAACGGCCCGGAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAACCGTGTCGGGGGCTaGTCTCATCCCAGCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RNGPEDWAQVGGKLMQVRNRVGG*SHPSLN Trigger: GTTGAGGCTGGGATGAGACAAGCCCCCGACACGGTT...GCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | CAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCAGACTGGCCATGTGGTaGGTAACCGTGTCGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QVGGKLMQVRSQTSLAARRLAMW*VTVSGA Trigger: AGCCCCCGACACGGTTACCAACCACATGGCCAGTCT...GCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | GAGGACTGGGCTCAAGTGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCTCGATCACCACTCGCTaGGCTCGGCCGATCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EDWAQVGGKLMQVRSQTSSITTR*ARPIWP Trigger: GGGCCAGATCGGCCGAGCCAAGCGAGTGGTGATCGA...GGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGAAAGCTCATGCAAGTACGCAGCCAAACATCCCTGGCCGCGCGCGGTCGAAGGTGATGATACCTaGGGGAGAAGGGGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WVESSCKYAAKHPWPRAVEGDDT*GRRGLP Trigger: TGGCAGACCCCTTCTCCCCAAGGTATCATCACCTTC...GACCGCGCGCGGCCAGGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS CCA 72 bp | CCATCTTGTCTTCGCTGTAGGGCAGGATCTCGGACATaGCGGGCGCGGGGTGGGCGCGGGGCGGGAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSCLRCRAGSRT*RARGGRGAGAG Trigger: TCCCGCTCCCGCCCCGCGCCCACCCCGCGCCCGCCATGTCCGAGATCCTGCCCTACAGCGAAGACAAGATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS GCA 72 bp | GCGGCAGCTGAAGGAGAGGTCGGAGCCCTCGGGGTCTaGGCCGAAGCGGCCCATCTTGTCTTCGCTGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAEGEVGALGV*AEAAHLVFAVG Trigger: CCCTACAGCGAAGACAAGATGGGCCGCTTCGGCGCAGACCCCGAGGGCTCCGACCTCTCCTTCAGCTGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||
| CDS TCA 72 bp | ACCGGCCCTACCTCAGCAGGGGAGCCGGCGGAAGGATaGAGTCATGCAGCATCCGGGGCTGAGGAGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGPTSAGEPAEG*SHAASGAEEPS Trigger: GCTTGGCTCCTCAGCCCCGGATGCTGCATGACTTCATCCTTCCGCCGGCTCCCCTGCTGAGGTAGGGCCGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296238.4 |
||