Pregenerated sensors for CAMK2N1 (Homo sapiens)
Ensembl gene IDs: ENSG00000162545Ensembl transcript IDs: ENST00000375078.4, ENST00000489020.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTaGCGCTTCATTAAGTGGTTCAAAATCCAGATCTATAATTGCGCA | + |
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Preference number: 1 (lower is better) Translates to: QPNQRRMPTPQNTWC*RFIKWFKIQIYNCA Trigger: TGCGCAATTATAGATCTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR CCA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTaGTGTTGCCGCTTCATTAAGTGGTTCAAAATCCAGATCTATAAT | + |
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Preference number: 1 (lower is better) Translates to: WEQPNQRRMPTPQNT*CCRFIKWFKIQIYN Trigger: ATTATAGATCTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR GCA 90 bp | AGATTAAATAATGTAAACATTGGGAACAGCCAAATCAGCGAAGAATaGCAACACCTCAAAACACCTGGTGTTGCCGCTTCATTAAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: RLNNVNIGNSQISEE*QHLKTPGVAASLSG Trigger: ACCACTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCAATGTTTACATTATTTAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR CCA 90 bp | AGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCTTCATTAAGTaGTTCAAAATCCAGATCTATAATTGCGCAATATTCACCGTATAT | + |
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Preference number: 1 (lower is better) Translates to: RMPTPQNTWCCRFIK*FKIQIYNCAIFTVY Trigger: ATATACGGTGAATATTGCGCAATTATAGATCTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR TCA 90 bp | ACACTCCAAGCATTCCTGTACGTGGACTCAGAGCACAGAGAAAAGAAACTAAAAATCTGTCTCCCGGCCTaGTACCAGATACAGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: TLQAFLYVDSEHREKKLKICLPA*YQIQVV Trigger: AACAACCTGTATCTGGTATCAGGCCGGGAGACAGAT...TTTTAGTTTCTTTTCTCTGTGCTCTGAGTCCACGTACAGGAATGCTTGGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCTCACACAACAGACTGCAAGGGGAAGTTAGAAAAAGCTCAAGCATTTTTCAAAACACCTGGTGTTaGCGCTTCATTAAGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GCSHNRLQGEVRKSSSIFQNTWC*RFIKWF Trigger: GAACCACTTAATGAAGCGGCAACACCAGGTGTTTTG...AAAAATGCTTGAGCTTTTTCTAACTTCCCCTTGCAGTCTGTTGTGTGAGCAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCTCACACAACAGACTGCAAGGGGAAGTTAGAAAAAGCTCAAGCATTTTTCTTGGGCAGATAGCTTaGAGCAACAAAGAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: GCSHNRLQGEVRKSSSIFLGQIA*SNKETQ Trigger: TTGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAG...AAAAATGCTTGAGCTTTTTCTAACTTCCCCTTGCAGTCTGTTGTGTGAGCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTCCATTTGCATTAACTTGGGCAGATAGCTTGCAGCAACAAAGAAACACAACACCTCAAAACACCTaGTGTTGCCGCTTCATTAAG | + |
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Preference number: 2 (lower is better) Translates to: MCPFALTWADSLQQQRNTTPQNT*CCRFIK Trigger: CTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGT...TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGGACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR CCA 90 bp | GCAAATACCATGCAAAACAGGCAGCTGGTGTGCCTTAAGAGAATCCCTATAAATTGCCGCTTCATTAAGTaGTTCAAAATCCAGATCTAT | + |
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Preference number: 2 (lower is better) Translates to: ANTMQNRQLVCLKRIPINCRFIK*FKIQIY Trigger: ATAGATCTGGATTTTGAACCACTTAATGAAGCGGCA...ATTTATAGGGATTCTCTTAAGGCACACCAGCTGCCTGTTTTGCATGGTATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTCCATTTGCATTAACTTGGGCAGATAGCTTGCAGCAACAAAGAAACACACATTTCACATCCAAGTaGACAGAACCATTTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: MCPFALTWADSLQQQRNTHFTSK*TEPFLQ Trigger: TTGCAAAAATGGTTCTGTGCACTTGGATGTGAAATG...TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGGACACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTATTTTTGCAGAGGAGCCCAGAGCCTTCTCCTCCTCCTCCTCCTCCTCTCGCTCTTTTCATGCTTTTaGCCAATAACTGTTACCGCC | + |
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Preference number: 3 (lower is better) Translates to: FYFCRGAQSLLLLLLLLSLFSCF*PITVTA Trigger: GGCGGTAACAGTTATTGGCAAAAAGCATGAAAAGAG...CGAGAGGAGGAGGAGGAGGAGGAGAAGGCTCTGGGCTCCTCTGCAAAAATAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR CAA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCGATACCAGATACAGGTaGTTGATTTCATCGTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCDTRYR*LISSWV Trigger: TACCCACGATGAAATCAACAACCTGTATCTGGTATC...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR GCA 72 bp | GATTTCCTCACGCAAGAGGCATTTTTGCAAATACCATaGAAAACAGGCAGCTGGTGTGCCTTAAGAGAATCC | + |
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Preference number: 3 (lower is better) Translates to: DFLTQEAFLQIP*KTGSWCALRES Trigger: GGATTCTCTTAAGGCACACCAGCTGCCTGTTTTGCATGGTATTTGCAAAAATGCCTCTTGCGTGAGGAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR CCA 72 bp | CCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTaGTGTTGCCGCTTCATTAAGTGGTTCAAAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: PNQRRMPTPQNT*CCRFIKWFKIQ Trigger: CTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR GCA 72 bp | CAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTaGCGCTTCATTAAGTGGTTCAAAATCCAGATCTAT | + |
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Preference number: 3 (lower is better) Translates to: QRRMPTPQNTWC*RFIKWFKIQIY Trigger: ATAGATCTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTCCATTTGCATTAACTTGGGCAGATAGCTTGCAGCAACAAAGAAACACAACCAGATACAGGTTGTaGATTTCATCGTGGGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: MCPFALTWADSLQQQRNTTRYRL*ISSWVA Trigger: TGCTACCCACGATGAAATCAACAACCTGTATCTGGT...TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGGACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCGCAGCACCTCCGACATaGTCGCGTCCGGGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCAAPPT*SRPGAP Trigger: CGGAGCCCCCGGACGCGACCATGTCGGAGGTGCTGC...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | GGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCGGCAGGAGAAGATCTaGCCCACGTCGCCGCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: GTAKSAKNANTSKHLVLPRQEKI*PTSPPS Trigger: CGACGGCGGCGACGTGGGCCAGATCTTCTCCTGCCG...CGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | CCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCTTCATTTTCGGGGAGGCAGACTaGGAGCTGCGAGCGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PNQRRMPTPQNTWCCRFIFGEAD*ELRAAG Trigger: CCCCGCCGCTCGCAGCTCCCAGTCTGCCTCCCCGAA...AATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | ACTCCAAGCATTCCTGTACGTGGACTCAGAGCACAGAGAAAAGAAACTAAAATGGGCGGCCGCTTGTTCTaGCCGGCGCCGAAGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: TPSIPVRGLRAQRKETKMGGRLF*PAPKKL Trigger: CAACTTCTTCGGCGCCGGGCAGAACAAGCGGCCGCC...CATTTTAGTTTCTTTTCTCTGTGCTCTGAGTCCACGTACAGGAATGCTTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR TCA 90 bp | ACATTGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGAGAGGGAGACGGGGCTaGAAAACAGGGACTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: TLGTAKSAKNANTSKHLVRGRRG*KTGTER Trigger: TCTTTCAGTCCCTGTTTTTCAGCCCCGTCTCCCTCT...CACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTTGCAGAGGAGCCCAGAGCCTTCTCCTCCTCCTCCTCCTCCTCTCGCAAAACACCTGGTGTTaGCGCTTCATTAAGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FYFCRGAQSLLLLLLLLSQNTWC*RFIKWF Trigger: GAACCACTTAATGAAGCGGCAACACCAGGTGTTTTG...CGAGAGGAGGAGGAGGAGGAGGAGAAGGCTCTGGGCTCCTCTGCAAAAATAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTTGCAGAGGAGCCCAGAGCCTTCTCCTCCTCCTCCTCCTCCTCTCGAACAGGCAGCTGGTGTaGCTTAAGAGAATCCCTATA | + |
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Preference number: 4 (lower is better) Translates to: FYFCRGAQSLLLLLLLLSNRQLV*LKRIPI Trigger: TATAGGGATTCTCTTAAGGCACACCAGCTGCCTGTT...CGAGAGGAGGAGGAGGAGGAGGAGAAGGCTCTGGGCTCCTCTGCAAAAATAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTTGCAGAGGAGCCCAGAGCCTTCTCCTCCTCCTCCTCCTCCTCTCGAGAAATAGCCCTGTGTaGTGGTTCAAGGTGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: FYFCRGAQSLLLLLLLLSRNSPV*WFKVQH Trigger: ATGTTGCACCTTGAACCAGCACACAGGGCTATTTCT...CGAGAGGAGGAGGAGGAGGAGGAGAAGGCTCTGGGCTCCTCTGCAAAAATAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCTGCAAAACAGGCAGCTaGTGTGCCTTAAGAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCCKTGS*CALRES Trigger: GGATTCTCTTAAGGCACACCAGCTGCCTGTTTTGCA...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCACACCTCAAAACACCTaGTGTTGCCGCTTCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCTPQNT*CCRFIK Trigger: CTTAATGAAGCGGCAACACCAGGTGTTTTGAGGTGT...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCAATAGCCCTGTGTGCTaGTTCAAGGTGCAACATACA | + |
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Preference number: 4 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCNSPVC*FKVQHT Trigger: TGTATGTTGCACCTTGAACCAGCACACAGGGCTATT...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCTTAGACACCAGGAGGTaGCTTGTCGGTCATATTTTT | + |
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Preference number: 4 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCLDTRR*LVGHIF Trigger: AAAAATATGACCGACAAGGCACCTCCTGGTGTCTAA...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | GCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCTTCATTGTGCTGGTTCAAGGTaGAACATACAGAATATTGAA | + |
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Preference number: 4 (lower is better) Translates to: AKSAKNANTSKHLVLPLHCAGSR*NIQNIE Trigger: TTCAATATTCTGTATGTTGCACCTTGAACCAGCACA...ATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR TCA 90 bp | CTCTTTTCATGCTTTTTGCCAATAACTGTTACCGCCGTTCTTATTCTCTCCCTTGGAAGGGAAACCTCTTaGGGTCCAAAGTTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LFSCFLPITVTAVLILSLGRETS*GPKLQT Trigger: TGTTTGCAACTTTGGACCTCAAGAGGTTTCCCTTCC...AAGGGAGAGAATAAGAACGGCGGTAACAGTTATTGGCAAAAAGCATGAAAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | GCAAATACCATGCAAAACAGGCAGCTGGTGTGCCTTAAGAGAATCCCTATAAATCTTGGGCAGATAGCTTaGAGCAACAAAGAAACACAA | + |
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Preference number: 4 (lower is better) Translates to: ANTMQNRQLVCLKRIPINLGQIA*SNKETQ Trigger: TTGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAG...ATTTATAGGGATTCTCTTAAGGCACACCAGCTGCCTGTTTTGCATGGTATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CCA 90 bp | GCAAATACCATGCAAAACAGGCAGCTGGTGTGCCTTAAGAGAATCCCTATAAATCCATTTGCATTAACTTaGGCAGATAGCTTGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ANTMQNRQLVCLKRIPINPFALT*ADSLQQ Trigger: TTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGG...ATTTATAGGGATTCTCTTAAGGCACACCAGCTGCCTGTTTTGCATGGTATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR GCA 90 bp | ATGTGTCCATTTGCATTAACTTGGGCAGATAGCTTGCAGCAACAAAGAAACACAGCTCACACAACAGACTaGAAGGGGAAGTTAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: MCPFALTWADSLQQQRNTAHTTD*KGKLEK Trigger: TTTTTCTAACTTCCCCTTGCAGTCTGTTGTGTGAGC...TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGGACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS GCA 90 bp | GCGGCTGCGCTGCGCTGCGCTCCGGCTCCGCGCGCGAGTGGCTGCTaGTCCGCCAGAGGCGAGCAGGACTCACATCCTCGGCGCGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AAALRCAPAPRASGC*SARGEQDSHPRRAG Trigger: CCCAGCGCGCCGAGGATGTGAGTCCTGCTCGCCTCTGGCGGAGCAGCAGCCACTCGCGCGCGGAGCCGGAGCGCAGCGCAGCGCAGCCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS CCA 90 bp | AGCGCCCGCGGCTGCGCTGCGCTGCGCTCCGGCTCCGCGCGCGAGTaGCTGCTGCTCCGCCAGAGGCGAGCAGGACTCACATCCTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SARGCAALRSGSARE*LLLRQRRAGLTSSA Trigger: CGCCGAGGATGTGAGTCCTGCTCGCCTCTGGCGGAGCAGCAGCCACTCGCGCGCGGAGCCGGAGCGCAGCGCAGCGCAGCCGCGGGCGCT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | TGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCTCAATAACAACCCGCTaGCTCCGGCCGATCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: WEQPNQRRMPTPQNTWCCSITTR*LRPIWP Trigger: GGGCCAGATCGGCCGGAGCAAGCGGGTTGTTATTGA...GCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | ACATTGGGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGACACCAGGAGGTGCCTaGTCGGTCATATTTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: TLGTAKSAKNANTSKHLVTPGGA*SVIFFS Trigger: GCTGAAAAATATGACCGACAAGGCACCTCCTGGTGT...CACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | GGAACAGCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGACCAGATACAGGTTGTaGATTTCATCGTGGGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: GTAKSAKNANTSKHLVLPTRYRL*ISSWVA Trigger: TGCTACCCACGATGAAATCAACAACCTGTATCTGGT...CGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | CCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCTTCATTGGGAAGGGAAACCTCTaGAGGTCCAAAGTTGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: PNQRRMPTPQNTWCCRFIGKGNL*RSKVAN Trigger: GTTTGCAACTTTGGACCTCAAGAGGTTTCCCTTCCC...AATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS GCA 90 bp | CTCTCCCTTAACTCATTGTCTTTGGGGGAGTTAGACACCAGGAGGTaGCTTGTCGGTCATATTTTTCAGCACGTCATCAATCCTATCATC | + |
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Preference number: 5 (lower is better) Translates to: LSLNSLSLGELDTRR*LVGHIFQHVINPII Trigger: GATGATAGGATTGATGACGTGCTGAAAAATATGACCGACAAGGCACCTCCTGGTGTCTAACTCCCCCAAAGACAATGAGTTAAGGGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000375078.4 ENST00000489020.1 |
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| CDS-3UTR CAA 90 bp | GCCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCTTCATCTCTTTTCATGCTTTTaGCCAATAACTGTTACCGCC | + |
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Preference number: 5 (lower is better) Translates to: AKSAKNANTSKHLVLPLHLFSCF*PITVTA Trigger: GGCGGTAACAGTTATTGGCAAAAAGCATGAAAAGAG...ATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | CCAAATCAGCGAAGAATGCCAACACCTCAAAACACCTGGTGTTGCCGCTTCATTGATACCAGATACAGGTaGTTGATTTCATCGTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: PNQRRMPTPQNTWCCRFIDTRYR*LISSWV Trigger: TACCCACGATGAAATCAACAACCTGTATCTGGTATC...AATGAAGCGGCAACACCAGGTGTTTTGAGGTGTTGGCATTCTTCGCTGATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | ATGTGTCCATTTGCATTAACTTGGGCAGATAGCTTGCAGCAACAAAGAAACACACTTAACTCATTGTCTTaGGGGGAGTTAGACACCAGG | + |
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Preference number: 5 (lower is better) Translates to: MCPFALTWADSLQQQRNTLNSLS*GELDTR Trigger: CCTGGTGTCTAACTCCCCCAAAGACAATGAGTTAAG...TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGGACACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | ATGTGTCCATTTGCATTAACTTGGGCAGATAGCTTGCAGCAACAAAGAAACACAACTTGGGCAGATAGCTaGCAGCAACAAAGAAACACA | + |
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Preference number: 5 (lower is better) Translates to: MCPFALTWADSLQQQRNTTWADS*QQQRNT Trigger: TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGT...TGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAAGTTAATGCAAATGGACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS-3UTR CAA 90 bp | GCAAATACCATGCAAAACAGGCAGCTGGTGTGCCTTAAGAGAATCCCTATAAATACGCAAGAGGCATTTTaGCAAATACCATGCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: ANTMQNRQLVCLKRIPINTQEAF*QIPCKT Trigger: TGTTTTGCATGGTATTTGCAAAAATGCCTCTTGCGT...ATTTATAGGGATTCTCTTAAGGCACACCAGCTGCCTGTTTTGCATGGTATTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS GCA 72 bp | CTGCGCTGCGCTCCGGCTCCGCGCGCGAGTGGCTGCTaGTCCGCCAGAGGCGAGCAGGACTCACATCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LRCAPAPRASGC*SARGEQDSHPR Trigger: CCGAGGATGTGAGTCCTGCTCGCCTCTGGCGGAGCAGCAGCCACTCGCGCGCGGAGCCGGAGCGCAGCGCAG 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS GCA 72 bp | GCGCTGCGCTGCGCTCCGGCTCCGCGCGCGAGTGGCTaGTGCTCCGCCAGAGGCGAGCAGGACTCACATCCT | + |
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Preference number: 6 (lower is better) Translates to: ALRCAPAPRASG*CSARGEQDSHP Trigger: AGGATGTGAGTCCTGCTCGCCTCTGGCGGAGCAGCAGCCACTCGCGCGCGGAGCCGGAGCGCAGCGCAGCGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375078.4 |
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| CDS CAA 90 bp | ATCGAGGTCTCTGTCTCTCCCTGTCTAAGGTGTCGGTCGCCCTTATaGTTTCGGCGGCTTCTGCGTCCTCCCCAAACGCGCGTCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: IEVSVSPCLRCRSPL*FRRLLRPPQTRVLG Trigger: GCCGAGGACGCGCGTTTGGGGAGGACGCAGAAGCCGCCGAAACAATAAGGGCGACCGACACCTTAGACAGGGAGAGACAGAGACCTCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489020.1 |
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| CDS CAA 72 bp | TCTGTCTCTCCCTGTCTAAGGTGTCGGTCGCCCTTATaGTTTCGGCGGCTTCTGCGTCCTCCCCAAACGCGC | + |
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Preference number: 6 (lower is better) Translates to: SVSPCLRCRSPL*FRRLLRPPQTR Trigger: GCGCGTTTGGGGAGGACGCAGAAGCCGCCGAAACAATAAGGGCGACCGACACCTTAGACAGGGAGAGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489020.1 |
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| CDS CAA 72 bp | ACCGCCGTTCTTATTCTCTCCCTTAACTCATTGTCTTaGGGGGAGTTAGACACCAGGAGGTGCCTTGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: TAVLILSLNSLS*GELDTRRCLVG Trigger: ACCGACAAGGCACCTCCTGGTGTCTAACTCCCCCAAAGACAATGAGTTAAGGGAGAGAATAAGAACGGCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375078.4 ENST00000489020.1 |
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| CDS GCA 72 bp | AACTCATTGTCTTTGGGGGAGTTAGACACCAGGAGGTaGCTTGTCGGTCATATTTTTCAGCACGTCATCAAT | + |
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Preference number: 6 (lower is better) Translates to: NSLSLGELDTRR*LVGHIFQHVIN Trigger: ATTGATGACGTGCTGAAAAATATGACCGACAAGGCACCTCCTGGTGTCTAACTCCCCCAAAGACAATGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000375078.4 ENST00000489020.1 |
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| CDS CAA 90 bp | ATAACTGTTACCGCCGTTCTTATTCTCTCCCTTAACTCATTGTCTTaGGGGGAGTTAGACACCAGGAGGTGCCTTGTCGGTCATATTTTT | + |
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Preference number: 6 (lower is better) Translates to: ITVTAVLILSLNSLS*GELDTRRCLVGHIF Trigger: AAAAATATGACCGACAAGGCACCTCCTGGTGTCTAACTCCCCCAAAGACAATGAGTTAAGGGAGAGAATAAGAACGGCGGTAACAGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375078.4 ENST00000489020.1 |
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