RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMK2G (Homo sapiens)

Ensembl gene IDs: ENSG00000148660

Ensembl transcript IDs: ENST00000305762.11, ENST00000322635.7, ENST00000322680.7, ENST00000351293.7, ENST00000372765.5, ENST00000394762.7, ENST00000423381.6, ENST00000433289.5, ENST00000441192.2, ENST00000472912.5, ENST00000474131.5, ENST00000477205.2, ENST00000492020.5, ENST00000680035.1

Found 1041 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAA +
Preference number: 1 (lower is better)
Translates to: HLGTAETDTKGGREG*MQGRALAAAAFVIE
Trigger: TTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR GCA 90 bp GCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCTTaGCAGGTTAGAAGAAAACACGAAGCAAAGCAGCAACAACCCCTC +
Preference number: 1 (lower is better)
Translates to: AKGGTGALTRAWLSP*QVRRKHEAKQQQPL
Trigger: GAGGGGTTGTTGCTGCTTTGCTTCGTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 90 bp CAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCT +
Preference number: 1 (lower is better)
Translates to: QTNRTAAVTQALQSH*LRRLDLRLESPKAP
Trigger: AGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
3UTR CCA 90 bp CTAGGGCCCAGGGGCTGGGACATGCATGAGGTGCTCGGAGGAGCCTaGCTAAATCCAAGCACCAGCACCTGTGAGTCTGCTCTCTTCTCA +
Preference number: 1 (lower is better)
Translates to: LGPRGWDMHEVLGGA*LNPSTSTCESALFS
Trigger: TGAGAAGAGAGCAGACTCACAGGTGCTGGTGCTTGGATTTAGCCAGGCTCCTCCGAGCACCTCATGCATGTCCCAGCCCCTGGGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR TCA 90 bp CAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTCCTTGCCAGGTTAGAAGAAAACACG +
Preference number: 1 (lower is better)
Translates to: QISTETEPPKAAREP*PGPGSLLARLEENT
Trigger: CGTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 90 bp CCAGAGAGGCCAAGCTCACCTCTTCAAGGCCGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCTCATACATACTCCTGCCTTCTTGCC +
Preference number: 1 (lower is better)
Translates to: PERPSSPLQGRWVSH*SCQDGPHTYSCLLA
Trigger: GGCAAGAAGGCAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGGTGAGCTTGGCCTCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 90 bp AGTCCATGGGGACCAGAGAGGCCAAGCTCACCTCTTCAAGGCCGGTaGGTGAGCCACTGCTCATGCCAGGATGGACCTCATACATACTCC +
Preference number: 1 (lower is better)
Translates to: SPWGPERPSSPLQGR*VSHCSCQDGPHTYS
Trigger: GGAGTATGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGGTGAGCTTGGCCTCTCTGGTCCCCATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 90 bp AGGCCAAGCTCACCTCTTCAAGGCCGGTGGGTGAGCCACTGCTCATaGCAGGATGGACCTCATACATACTCCTGCCTTCTTGCCAACCCA +
Preference number: 1 (lower is better)
Translates to: RPSSPLQGRWVSHCS*QDGPHTYSCLLANP
Trigger: TGGGTTGGCAAGAAGGCAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGGTGAGCTTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAATGTGGTAAC +
Preference number: 1 (lower is better)
Translates to: LRPSRATGCEGWTSG*NLLKPLSNRTECGN
Trigger: GTTACCACATTCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR CCA 90 bp CCTCTTCTCCCAGCTCTCGTGCCTCCTGAAGGTAGTCCAGGGAACTaGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAG +
Preference number: 1 (lower is better)
Translates to: PLLPALVPPEGSPGN*NLPTFPPKVEMFVQ
Trigger: CTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAGGAGGCACGAGAGCTGGGAGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 90 bp TGGGTGAGCCACTGCTCATGCCAGGATGGACCTCATACATACTCCTaGCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCAT +
Preference number: 1 (lower is better)
Translates to: WVSHCSCQDGPHTYS*LLANPRAVGGFKTH
Trigger: ATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 90 bp ATGAGCACACAGATGAGTTCCAGCGACTTTAGCACGCTAAACACATaGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAAT +
Preference number: 1 (lower is better)
Translates to: MSTQMSSSDFSTLNT*PSRPEKVGKVGEAN
Trigger: ATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTCGCTGGAACTCATCTGTGTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR TCA 90 bp ATATTAGGGCCCACATGCATTGTGCATCCTATAGAAATGGATGAGTaGGTGCATGTCAGACTAACACGAGGTTTCTCATCGGCTTCATGG +
Preference number: 1 (lower is better)
Translates to: ILGPTCIVHPIEMDE*VHVRLTRGFSSASW
Trigger: CCATGAAGCCGATGAGAAACCTCGTGTTAGTCTGACATGCACTCACTCATCCATTTCTATAGGATGCACAATGCATGTGGGCCCTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR TCA 90 bp CTCAATATTAGGGCCCACATGCATTGTGCATCCTATAGAAATGGATaGGTGAGTGCATGTCAGACTAACACGAGGTTTCTCATCGGCTTC +
Preference number: 1 (lower is better)
Translates to: LNIRAHMHCASYRNG*VSACQTNTRFLIGF
Trigger: GAAGCCGATGAGAAACCTCGTGTTAGTCTGACATGCACTCACTCATCCATTTCTATAGGATGCACAATGCATGTGGGCCCTAATATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 90 bp ACCAAGGCCATGACCAATTGCTCCTCCATTATCTTCTTTGCTATCTaGTTAGGGTATAGATCTCTTCCTCCTGGAATGGAACTCCTTGAG +
Preference number: 1 (lower is better)
Translates to: TKAMTNCSSIIFFAI*LGYRSLPPGMELLE
Trigger: CTCAAGGAGTTCCATTCCAGGAGGAAGAGATCTATACCCTAAGCAGATAGCAAAGAAGATAATGGAGGAGCAATTGGTCATGGCCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 90 bp AGTAAGAATGCTAAGAAGTGGGGCTGGAGCAGCCATATGAAGCTATaGGTCTCAATGAATTCTAAGACCATTTGTCTTCAAGCCAGCAAA +
Preference number: 1 (lower is better)
Translates to: SKNAKKWGWSSHMKL*VSMNSKTICLQASK
Trigger: TTTGCTGGCTTGAAGACAAATGGTCTTAGAATTCATTGAGACCCATAGCTTCATATGGCTGCTCCAGCCCCACTTCTTAGCATTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 2 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 2 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 2 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: HLGTAETDTKGGREGCMQALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR GCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: TDTKGGREGCMQGRALAAGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 2 (lower is better)
Translates to: ETDTKGGREGCMQGRALATGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR TCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCTTCAAGGCCGGTGGGTaGGCCACTGCTCATGCCAGG +
Preference number: 2 (lower is better)
Translates to: HITAPKALSEFLPGPPKSFKAGG*ATAHAR
Trigger: CCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAA...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRAAREP*PGPGSL
Trigger: GAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGC...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 2 (lower is better)
Translates to: HITAPKALSEFLPGPPKSSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 2 (lower is better)
Translates to: GREGCMQGRALAAAAFVITGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR GCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGGCCACCTCAGGAGCTaGAATCACATCACGGCCCCC +
Preference number: 2 (lower is better)
Translates to: RQPQRQPECIETTTTSSPGHLRS*NHITAP
Trigger: GGGGGCCGTGATGTGATTGCAGCTCCTGAGGTGGCC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 2 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...GACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: RQPQRQPECIETTTTSSPALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACCGGGCTCTCAGTCCTaGGGCCACCACTTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGPGSQS*GHHFSA
Trigger: AGCTGAGAAGTGGTGGCCTCAGGACTGAGAGCCCGG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAGGGCCCAGGCCCAGATaGGGGTCAGCATGGGGACCA +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRGPRPR*GSAWGP
Trigger: TGGTCCCCATGCTGACCCTCATCTGGGCCTGGGCCC...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: EGCMQGRALAAAAFVIELALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAGCTTTGCCAGTCCTCTaGGACGGCCCACACCTCCTC +
Preference number: 2 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRALPVL*DGPHLL
Trigger: GAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGC...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR CCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCGTCGGCCTGAGAAGGTaGGGAAAGTGGGTGAAGCTA +
Preference number: 2 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVVGLRR*GKWVKL
Trigger: TAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGAC...GACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR TCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: TPLLLARAVRSISKTGKEAAREP*PGPGSL
Trigger: GAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGC...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 2 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 2 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACCACCACTTCTCAGCTaGCTCCACAGCAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGPPLLS*LHSRLG
Trigger: TCCCAGCCTGCTGTGGAGGCAGCTGAGAAGTGGTGG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCTCCTATAGAAATGGATaGGTGAGTGCATGTCAGACT +
Preference number: 2 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSSYRNG*VSACQT
Trigger: AGTCTGACATGCACTCACTCATCCATTTCTATAGGA...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp GAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAAATGGCCAAGTCGGCCTaGGAAGGTGGGGAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: EGWTSGWNLLKPLSNRTEMAKSA*EGGESG
Trigger: CCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCAT...TTCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR GCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATAGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCCACCACTTCTCAGCTaGCTCCACAGCAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHPPLLS*LHSRLG
Trigger: TCCCAGCCTGCTGTGGAGGCAGCTGAGAAGTGGTGG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCCCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATA +
Preference number: 2 (lower is better)
Translates to: RQPQRQPECIETTTTSSPPPPPS*RDKASI
Trigger: TATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGG...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: EGCMQGRALAAAAFVIELGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRALTRA*LSPCQV
Trigger: AACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGC...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTCCGGGCTCTCAGTCCTaGGGCCACCACTTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVPGSQS*GHHFSA
Trigger: AGCTGAGAAGTGGTGGCCTCAGGACTGAGAGCCCGG...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGGGCCCAGGCCCAGATaGGGGTCAGCATGGGGACCA +
Preference number: 2 (lower is better)
Translates to: PLLLARAVRSISKTGKEMGPRPR*GSAWGP
Trigger: TGGTCCCCATGCTGACCCTCATCTGGGCCTGGGCCC...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGGCCACCTCAGGAGCTaGAATCACATCACGGCCCCC +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVGHLRS*NHITAP
Trigger: GGGGGCCGTGATGTGATTGCAGCTCCTGAGGTGGCC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 2 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVALTRA*LSPCQV
Trigger: AACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGATCCCACAGGGGCACTTaGCAGAGGGCCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRSHRGT*QRAQAQ
Trigger: CTGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGA...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CAA 90 bp TGTCTGATTTCCAAGCATAACTTATTGCAACCATTCTGCCAGGCTTaGCCAGTCCTCTGGGACGGCCCACACCTCCTCTCCCAGGACCAC +
Preference number: 2 (lower is better)
Translates to: CLISKHNLLQPFCQA*PVLWDGPHLLSQDH
Trigger: GTGGTCCTGGGAGAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAGTTATGCTTGGAAATCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR TCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATATTCAAGGCCGGTGGGTaGGCCACTGCTCATGCCAGG +
Preference number: 2 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIFKAGG*ATAHAR
Trigger: CCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAA...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAAGCACGCTAAACACATaGCCAAGTCGGCCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRSTLNT*PSRPEK
Trigger: CTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCT...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR CAA 90 bp TCACGGAGCCAGACCCTAGTCTGTCTGATTTCCAAGCATAACTTATaGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCA +
Preference number: 2 (lower is better)
Translates to: SRSQTLVCLISKHNL*QPFCQALPVLWDGP
Trigger: TGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAGTTATGCTTGGAAATCAGACAGACTAGGGTCTGGCTCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR TCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATAACATGCGGGGAGGGGTaGTGCCCATGCAGATTGTCC +
Preference number: 2 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQITCGEG*CPCRLS
Trigger: GGACAATCTGCATGGGCATCACCCCTCCCCGCATGT...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 2 (lower is better)
Translates to: PLLLARAVRSISKTGKEMSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACCTCATACATACTCCTaGCTTCTTGCCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGPHTYS*LLANPR
Trigger: CCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: PLLLARAVRSISKTGKEMLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCCTCATACATACTCCTaGCTTCTTGCCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHPHTYS*LLANPR
Trigger: CCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCT +
Preference number: 2 (lower is better)
Translates to: TPLLLARAVRSISKTGKERWVSH*SCQDGP
Trigger: AGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCG...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGACGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCT +
Preference number: 2 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRRWVSH*SCQDGP
Trigger: AGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCG...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCCTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: SDGHDVLISPILGAYASSLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GGGAGGGGAAGTAACCTGTCTGAGGTCATCCAATTTGGAGTCACGGAGCCAGACTTATTGCAACCATTCTaGCAGGCTTTGCCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: GRGSNLSEVIQFGVTEPDLLQPF*QALPVL
Trigger: GAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA...GTCTGGCTCCGTGACTCCAAATTGGATGACCTCAGACAGGTTACTTCCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR CCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYFSSAS*RVHFCS
Trigger: GCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATACCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATA +
Preference number: 2 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIPPPPS*RDKASI
Trigger: TATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGG...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PLLLARAVRSISKTGKEMGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp TTAAATGAGGTAGGCACCACTCTCTGCCTTTCTTTGACAGCTAAGGAAACAGTTGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: LNEVGTTLCLSLTAKETVALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...AACTGTTTCCTTAGCTGTCAAAGAAAGGCAGAGAGTGGTGCCTACCTCATTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR CCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGACTGCTCATGCCAGGATaGACCTCATACATACTCCTG +
Preference number: 2 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRLLMPG*TSYILL
Trigger: CAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAG...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCCTGCTCATGCCAGGATaGACCTCATACATACTCCTG +
Preference number: 2 (lower is better)
Translates to: SDGHDVLISPILGAYASSLLMPG*TSYILL
Trigger: CAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAG...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAATCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTCCTCATACATACTCCTaGCTTCTTGCCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVPHTYS*LLANPR
Trigger: CCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGG...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGCCTGGCTCTCTCCTTaGCAGGTTAGAAGAAAACAC +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVAWLSP*QVRRKH
Trigger: GTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGCCCCAAAGGCAGCCTaGATGCATAGAAACGACCAC +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFAPKAA*MHRNDH
Trigger: GTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTAAGCACCAGCACCTGTaGGTCTGCTCTCTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFKHQHL*VCSLLS
Trigger: GCTGAGAAGAGAGCAGACTCACAGGTGCTGGTGCTT...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGACTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGACACCTCTTCTTCTTaGCAGAGCAGTCAGGTCAAT +
Preference number: 2 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVDTSSS*QSSQVN
Trigger: ATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PLLLARAVRSISKTGKEMFSSAS*RVHFCS
Trigger: GCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAA...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACCATTCTAGGCGCCTATaGAAGTTCCAAAGAAGTTCA +
Preference number: 2 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYHSRRL*KFQRSS
Trigger: TGAACTTCTTTGGAACTTGCATAGGCGCCTAGAATG...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCAAAGGCAGCCTGAATaGATAGAAACGACCACCACC +
Preference number: 2 (lower is better)
Translates to: TPLLLARAVRSISKTGKEQRQPE*IETTTT
Trigger: GGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTG...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTCAAAGGCAGCCTGAATaGATAGAAACGACCACCACC +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFQRQPE*IETTTT
Trigger: GGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTG...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATGCTTAAATACAAAGTAGGCACCACTCTCTaGCTTTCTTTGACAGCTAAG +
Preference number: 2 (lower is better)
Translates to: QVGLRRWGKWVKLMLKYKVGTTL*LSLTAK
Trigger: CTTAGCTGTCAAAGAAAGGCAGAGAGTGGTGCCTAC...TTTGTATTTAAGCATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR TCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGATCCTATAGAAATGGATaGGTGAGTGCATGTCAGACT +
Preference number: 2 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRSYRNG*VSACQT
Trigger: AGTCTGACATGCACTCACTCATCCATTTCTATAGGA...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCATTCTAGGCGCCTATaGAAGTTCCAAAGAAGTTCA +
Preference number: 2 (lower is better)
Translates to: TPLLLARAVRSISKTGKEHSRRL*KFQRSS
Trigger: TGAACTTCTTTGGAACTTGCATAGGCGCCTAGAATG...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATAATATTAGGGCCCACATaGATTGTGCATCCTATAGAA +
Preference number: 2 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIILGPT*IVHPIE
Trigger: TTCTATAGGATGCACAATGCATGTGGGCCCTAATAT...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR TCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATAGAAATGGATGAGTaGGTGCATGTCAGACTAACA +
Preference number: 2 (lower is better)
Translates to: TPLLLARAVRSISKTGKEIEMDE*VHVRLT
Trigger: TGTTAGTCTGACATGCACTCACTCATCCATTTCTAT...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTCATTCTAGGCGCCTATaGAAGTTCCAAAGAAGTTCA +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFHSRRL*KFQRSS
Trigger: TGAACTTCTTTGGAACTTGCATAGGCGCCTAGAATG...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACATATTAGGGCCCACATaGATTGTGCATCCTATAGAA +
Preference number: 2 (lower is better)
Translates to: LLLARAVRSISKTGKEMDILGPT*IVHPIE
Trigger: TTCTATAGGATGCACAATGCATGTGGGCCCTAATAT...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTAAGGCCATGACCAATTaGTCCTCCATTATCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFKAMTN*SSIIFF
Trigger: AAAGAAGATAATGGAGGAGCAATTGGTCATGGCCTT...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTATCTTCTTTGCTATCTaGTTAGGGTATAGATCTCTT +
Preference number: 2 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFIFFAI*LGYRSL
Trigger: AAGAGATCTATACCCTAAGCAGATAGCAAAGAAGAT...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCACTGGCTGCGAAGGTaGGACCTCCGGCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLHWLRR*DLRLES
Trigger: AGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR GCA 72 bp ACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTT +
Preference number: 3 (lower is better)
Translates to: TAETDTKGGREG*MQGRALAAAAF
Trigger: AAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR GCA 72 bp TCCGGGCTCTCAGTCCTGAGGCCACCACTTCTCAGCTaGCTCCACAGCAGGCTGGGAGCTCTGCGTTCTCTC +
Preference number: 3 (lower is better)
Translates to: SGLSVLRPPLLS*LHSRLGALRSL
Trigger: GAGAGAACGCAGAGCTCCCAGCCTGCTGTGGAGGCAGCTGAGAAGTGGTGGCCTCAGGACTGAGAGCCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTCACTGGCTGCGAAGGTaGGACCTCCGGCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: GREGCMQGRALAAAAFVIHWLRR*DLRLES
Trigger: AGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
3UTR CCA 72 bp GGACCAGAGAGGCCAAGCTCACCTCTTCAAGGCCGGTaGGTGAGCCACTGCTCATGCCAGGATGGACCTCAT +
Preference number: 3 (lower is better)
Translates to: GPERPSSPLQGR*VSHCSCQDGPH
Trigger: ATGAGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGGTGAGCTTGGCCTCTCTGGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 72 bp ACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTTAGAAGAAAACACGAA +
Preference number: 3 (lower is better)
Translates to: TAKGGTGALTRA*LSPCQVRRKHE
Trigger: TTCGTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp AGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAACCATTCTGCCAGGCTTaGCCAGTCCTCTGGGACGGC +
Preference number: 3 (lower is better)
Translates to: STLNTWPSRPEKVGKVGEPFCQA*PVLWDG
Trigger: GCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGG...TTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR CAA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGCTCTGTCAGAGTTCTaGCCTGGTCCCCCTAAGTCC +
Preference number: 3 (lower is better)
Translates to: RQPQRQPECIETTTTSSPALSEF*PGPPKS
Trigger: GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 72 bp TCAAGGCCGGTGGGTGAGCCACTGCTCATGCCAGGATaGACCTCATACATACTCCTGCCTTCTTGCCAACCC +
Preference number: 3 (lower is better)
Translates to: SRPVGEPLLMPG*TSYILLPSCQP
Trigger: GGGTTGGCAAGAAGGCAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp CGAAGCAAAGCAGCAACAACCCCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATATTAGGGCCCACATGC +
Preference number: 3 (lower is better)
Translates to: RSKAATTPPPPS*RDKASILGPTC
Trigger: GCATGTGGGCCCTAATATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGGGGTTGTTGCTGCTTTGCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp CCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGCGTaGTGGCACTGCAGACTGCAGGGCAGGAAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: PAKRNPVVKGFA*WHCRLQGRKGL
Trigger: TAGCCCTTTCCTGCCCTGCAGTCTGCAGTGCCAGCACGCAAATCCCTTCACCACAGGGTTTCGTTTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp CCAAGCATAACTTATTGCAACCATTCTGCCAGGCTTTaGCAGTCCTCTGGGACGGCCCACACCTCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: PSITYCNHSARL*QSSGTAHTSSP
Trigger: GGGAGAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAGTTATGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR CCA 72 bp TCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: SRATGCEGWTSG*NLLKPLSNRTE
Trigger: TTCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR-3UTR CAA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTaGGACCTCCGGCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSHWLRR*DLRLES
Trigger: AGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CAA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAATCCCACAGGGGCACTaGGCAGAGGGCCCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRIPQGH*AEGPGP
Trigger: TGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGAT...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 72 bp CCAGCTCTCGTGCCTCCTGAAGGTAGTCCAGGGAACTaGAATCTACCCACCTTTCCCCCAAAAGTGGAGATG +
Preference number: 3 (lower is better)
Translates to: PALVPPEGSPGN*NLPTFPPKVEM
Trigger: CATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAGGAGGCACGAGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp CACTGCTCATGCCAGGATGGACCTCATACATACTCCTaGCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTT +
Preference number: 3 (lower is better)
Translates to: HCSCQDGPHTYS*LLANPRAVGGF
Trigger: AAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 72 bp CAGATGAGTTCCAGCGACTTTAGCACGCTAAACACATaGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: QMSSSDFSTLNT*PSRPEKVGKVG
Trigger: ACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTCGCTGGAACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR TCA 72 bp CATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTaGAGGGATTTGCGTGCTGGCACTGCAGACTGCAGG +
Preference number: 3 (lower is better)
Translates to: HLSSSQQNETLW*RDLRAGTADCR
Trigger: CCTGCAGTCTGCAGTGCCAGCACGCAAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCACTGGCTGCGAAGGTaGGACCTCCGGCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALHWLRR*DLRLES
Trigger: AGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
3UTR-3UTR CAA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTCACTGGCTGCGAAGGTaGGACCTCCGGCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFHWLRR*DLRLES
Trigger: AGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp TGTCTGATTTCCAAGCATAACTTATTGCAACCATTCTaGCAGGCTTTGCCAGTCCTCTGGGACGGCCCACAC +
Preference number: 3 (lower is better)
Translates to: CLISKHNLLQPF*QALPVLWDGPH
Trigger: GTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAGTTATGCTTGGAAATCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR CCA 72 bp CATGTCAGACTAACACGAGGTTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGCACCAATTCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: HVRLTRGFSSAS*RVHFCSTNSLP
Trigger: GGGAAGAGAATTGGTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGCTCTGTCAGAGTTCTaGCCTGGTCCCCCTAAGTCC +
Preference number: 3 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFALSEF*PGPPKS
Trigger: GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAATGAAGGTAGAAGCCTaGGCTCTGGACACCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRMKVEA*ALDTSF
Trigger: AAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCAT...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp TCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATaGAAGTTCCAAAGAAGTTCATTCCTAGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: SRCSHQPHSRRL*KFQRSSFLDLG
Trigger: CCCCAGGTCTAGGAATGAACTTCTTTGGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR GCA 72 bp CGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTaGAGCACCAATTCTCTTCCCTTCTACACTAAACAA +
Preference number: 3 (lower is better)
Translates to: RGFSSASWRVHF*STNSLPFYTKQ
Trigger: TTGTTTAGTGTAGAAGGGAAGAGAATTGGTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 72 bp CCCCAGAAGAGGAGTAAGAATGCTAAGAAGTGGGGCTaGAGCAGCCATATGAAGCTATGGGTCTCAATGAAT +
Preference number: 3 (lower is better)
Translates to: PQKRSKNAKKWG*SSHMKLWVSMN
Trigger: ATTCATTGAGACCCATAGCTTCATATGGCTGCTCCAGCCCCACTTCTTAGCATTCTTACTCCTCTTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR-3UTR CAA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATACAAGGCCATGACCAATaGCTCCTCCATTATCTTCTT +
Preference number: 3 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIQGHDQ*LLHYLL
Trigger: AAGAAGATAATGGAGGAGCAATTGGTCATGGCCTTG...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR TCA 72 bp AGGGCCCACATGCATTGTGCATCCTATAGAAATGGATaGGTGAGTGCATGTCAGACTAACACGAGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: RAHMHCASYRNG*VSACQTNTRFL
Trigger: GAGAAACCTCGTGTTAGTCTGACATGCACTCACTCATCCATTTCTATAGGATGCACAATGCATGTGGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR TCA 72 bp CCCACATGCATTGTGCATCCTATAGAAATGGATGAGTaGGTGCATGTCAGACTAACACGAGGTTTCTCATCG +
Preference number: 3 (lower is better)
Translates to: PTCIVHPIEMDE*VHVRLTRGFSS
Trigger: CGATGAGAAACCTCGTGTTAGTCTGACATGCACTCACTCATCCATTTCTATAGGATGCACAATGCATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR CCA 72 bp GCTAAGAAGTGGGGCTGGAGCAGCCATATGAAGCTATaGGTCTCAATGAATTCTAAGACCATTTGTCTTCAA +
Preference number: 3 (lower is better)
Translates to: AKKWGWSSHMKL*VSMNSKTICLQ
Trigger: TTGAAGACAAATGGTCTTAGAATTCATTGAGACCCATAGCTTCATATGGCTGCTCCAGCCCCACTTCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
3UTR TCA 72 bp CTTATAGTATCTTACTTAATCCTCACAATGATTAAATaGGGTAGGCACCACTCTCTGCCTTTCTTTGACAGC +
Preference number: 3 (lower is better)
Translates to: LIVSYLILTMIK*GRHHSLPFFDS
Trigger: GCTGTCAAAGAAAGGCAGAGAGTGGTGCCTACCTCATTTAATCATTGTGAGGATTAAGTAAGATACTATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGAGGAGGAGACGGGGCTaGGCCCGGCAGCACCGCGAG +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLRRRRG*ARQHRE
Trigger: CTCGCGGTGCTGCCGGGCTCAGCCCCGTCTCCTCCT...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000322680.7
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTGCAGGTGGCGGTGGTaGCCATGCTGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLCRWRW*PCWRAG
Trigger: GCCCGCCCGCCAGCATGGCCACCACCGCCACCTGCA...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR TCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTAGGAGGAGACGGGGCTaGGCCCGGCAGCACCGCGAG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAARRRRG*ARQHRE
Trigger: CTCGCGGTGCTGCCGGGCTCAGCCCCGTCTCCTCCT...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000322680.7
CDS-3UTR TCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLAAREP*PGPGSL
Trigger: GAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGC...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSAAREP*PGPGSL
Trigger: GAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGC...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGGGCTCCATGGCCGTCTaGAAGGGCGCGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLGSMAV*KGAGSW
Trigger: CCAAGAGCCCGCGCCCTTGCAGACGGCCATGGAGCC...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTGCAGGTGGCGGTGGTaGCCATGCTGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISCRWRW*PCWRAG
Trigger: GCCCGCCCGCCAGCATGGCCACCACCGCCACCTGCA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCGGGTGCAGGTGGCGGTaGTGGCCATGCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISGCRWR*WPCWRA
Trigger: CGCCCGCCAGCATGGCCACCACCGCCACCTGCACCC...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCTCCCACAGGGGCACTTaGCAGAGGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGSHRGT*QRAQAQ
Trigger: CTGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGA...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTTCCCACAGGGGCACTTaGCAGAGGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAASHRGT*QRAQAQ
Trigger: CTGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGA...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCTTCAAGGCCGGTGGGTaGGCCACTGCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCFKAGG*ATAHAR
Trigger: CCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAA...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCGGGCCCAGGCCCAGATaGGGGTCAGCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSGPRPR*GSAWGP
Trigger: TGGTCCCCATGCTGACCCTCATCTGGGCCTGGGCCC...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTAGGAGGAGACGGGGCTaGGCCCGGCAGCACCGCGAG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVARRRRG*ARQHRE
Trigger: CTCGCGGTGCTGCCGGGCTCAGCCCCGTCTCCTCCT...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000394762.7
CDS-3UTR TCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTTTCAAGGCCGGTGGGTaGGCCACTGCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAFKAGG*ATAHAR
Trigger: CCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAA...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGACATGCGGGGAGGGGTaGTGCCCATGCAGATTGTCC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLTCGEG*CPCRLS
Trigger: GGACAATCTGCATGGGCATCACCCCTCCCCGCATGT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGGGCTGCATGCCTaGAGAGGGGGCTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLLGLHA*RGGCSV
Trigger: GACAGAACAGCCCCCTCTGCAGGCATGCAGCCCCAG...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGCCACCTCAGGAGCTaGAATCACATCACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAGHLRS*NHITAP
Trigger: GGGGGCCGTGATGTGATTGCAGCTCCTGAGGTGGCC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCGGGGGCGGAGCTCTaGCTGCCAACTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAAGAEL*LPTEKF
Trigger: GAACTTCTCAGTTGGCAGGCAGAGCTCCGCCCCCGC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR CCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGCCTCTTCAAGGCCGGTaGGTGAGCCACTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLPLQGR*VSHCSC
Trigger: GCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGG...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGALTRA*LSPCQV
Trigger: AACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCGAGCCTGGTCAGCCGTaGTGCGCTTTGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCEPGQP*CALLGL
Trigger: TAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTC...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAACGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGACATGCGGGGAGGGGTaGTGCCCATGCAGATTGTCC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLTCGEG*CPCRLS
Trigger: GGACAATCTGCATGGGCATCACCCCTCCCCGCATGT...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGGCTCCATGGCCGTCTaGAAGGGCGCGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIGSMAV*KGAGSW
Trigger: CCAAGAGCCCGCGCCCTTGCAGACGGCCATGGAGCC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCT +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAARWVSH*SCQDGP
Trigger: AGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCAAGGGATTTGCGTGCTaGCACTGCAGACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCKGFAC*HCRLQG
Trigger: GCCCTGCAGTCTGCAGTGCCAGCACGCAAATCCCTT...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTTCAAGGCCGGTGGGTaGGCCACTGCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISFKAGG*ATAHAR
Trigger: CCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGGGCCCAGGCCCAGATaGGGGTCAGCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAGPRPR*GSAWGP
Trigger: TGGTCCCCATGCTGACCCTCATCTGGGCCTGGGCCC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGGCTCCATGGCCGTCTaGAAGGGCGCGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLGSMAV*KGAGSW
Trigger: CCAAGAGCCCGCGCCCTTGCAGACGGCCATGGAGCC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCCTGGGGCTGCATGCCTaGAGAGGGGGCTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISLGLHA*RGGCSV
Trigger: GACAGAACAGCCCCCTCTGCAGGCATGCAGCCCCAG...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322680.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR GCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCATACTCCTGCCTTCTTaGCAACCCAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCILLPS*QPKGCR
Trigger: CCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTAT...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCCCAGGGGCTGGGACATaGATGAGGTGCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISPGAGT*MRCSEE
Trigger: CTCCTCCGAGCACCTCATGCATGTCCCAGCCCCTGG...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCGTGAAGGGATTTGCGTaGTGGCACTGCAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCVKGFA*WHCRLQ
Trigger: CTGCAGTCTGCAGTGCCAGCACGCAAATCCCTTCAC...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCGGGCTCTTGGGCTaGGCTTACGAGACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCRGLLG*AYETVF
Trigger: AAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCG...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCAAGGGCGCGGGCTCTTaGGCTGGGCTTACGAGACTG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLKGAGS*AGLTRL
Trigger: CAGTCTCGTAAGCCCAGCCCAAGAGCCCGCGCCCTT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCTGGTTTGTGGCTCCATaGCCGTCTGCAAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACWFVAP*PSARAR
Trigger: CCGCGCCCTTGCAGACGGCCATGGAGCCACAAACCA...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAATGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp TTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCGGGTGCAGGTGGCGGTaGTGGCCATGCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LLQPFCQALPVLWDGPHLGCRWR*WPCWRA
Trigger: CGCCCGCCAGCATGGCCACCACCGCCACCTGCACCC...GAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTTCCCACAGGGGCACTTaGCAGAGGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVASHRGT*QRAQAQ
Trigger: CTGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGA...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGTGCTCGGAGGAGCCTaGCTAAATCCAAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLVLGGA*LNPSTS
Trigger: GCTGGTGCTTGGATTTAGCCAGGCTCCTCCGAGCAC...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCTGTTCAATAGGCTTTTaGCAGCTTGCCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCCSIGF*QLARPG
Trigger: GCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR TCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLSDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACCGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLCGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCACATGCGGGGAGGGGTaGTGCCCATGCAGATTGTCC +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLTCGEG*CPCRLS
Trigger: GGACAATCTGCATGGGCATCACCCCTCCCCGCATGT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGAACGAAACCCTGTGGTaGAGGGATTTGCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLNETLW*RDLRAG
Trigger: GCCAGCACGCAAATCCCTTCACCACAGGGTTTCGTT...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTTGGTTTGTGGCTCCTTaGCACCGCCATCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAWFVAP*HRHPTS
Trigger: AGAAGTCGGATGGCGGTGTCAAGGAGCCACAAACCA...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351293.7
ENST00000372765.5
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCATGGCCAAGTCGGCCTaGGAAGGTGGGGAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLMAKSA*EGGESG
Trigger: CCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCAT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAALLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVISRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGGCCACCTCAGGAGCTaGAATCACATCACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIGHLRS*NHITAP
Trigger: GGGGGCCGTGATGTGATTGCAGCTCCTGAGGTGGCC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCCCACCACTTCTCAGCTaGCTCCACAGCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISPPLLS*LHSRLG
Trigger: TCCCAGCCTGCTGTGGAGGCAGCTGAGAAGTGGTGG...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCCACCACTTCTCAGCTaGCTCCACAGCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLPPLLS*LHSRLG
Trigger: TCCCAGCCTGCTGTGGAGGCAGCTGAGAAGTGGTGG...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALASWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCCGTTGTGTACCACAGTaGTTTGTGGCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGRCVPQ*FVAPWP
Trigger: CGGCCATGGAGCCACAAACCACTGTGGTACACAACG...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVARVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGGGTGCAGGTGGCGGTaGTGGCCATGCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELGCRWR*WPCWRA
Trigger: CGCCCGCCAGCATGGCCACCACCGCCACCTGCACCC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCAACCAGGTGCACCTGTaGCTGAGCTCACTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLNQVHL*LSSLQR
Trigger: CCGCTGCAGTGAGCTCAGCCACAGGTGCACCTGGTT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAARVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLRVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCCTGTTTTCGCACTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCPVFAL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGTGCGAAAACAGG...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000351293.7
ENST00000372765.5
ENST00000433289.5
CDS-3UTR TCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLSDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVICGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCTTCAAGGCCGGTGGGTaGGCCACTGCTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAFKAGG*ATAHAR
Trigger: CCTGGCATGAGCAGTGGCTCACCCACCGGCCTTGAA...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCCGGGCTCTCAGTCCTaGGGCCACCACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVPGSQS*GHHFSA
Trigger: AGCTGAGAAGTGGTGGCCTCAGGACTGAGAGCCCGG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCGGGCTCTCAGTCCTaGGGCCACCACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAPGSQS*GHHFSA
Trigger: AGCTGAGAAGTGGTGGCCTCAGGACTGAGAGCCCGG...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGCTCTGCCTGCCAACTaGGAAGTTCCTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQALPAN*EVPGDK
Trigger: CTTGTCTCCAGGAACTTCTCAGTTGGCAGGCAGAGC...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCTGTGGCATTAGGTaGACGCTGGAACTCGACTTC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLLCGIR*TLELDF
Trigger: GAAGTCGAGTTCCAGCGTGCACCTAATGCCACAGAG...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305762.11
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAESRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAASNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCTTCAGGCACCGAGCTaGCATTCCCAGTGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVALQAPS*HSQCGA
Trigger: CGCTCCGCACTGGGAATGGCAGCTCGGTGCCTGAAG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCGCAGGCTGGGAGCTCTaGGTTCTCTCCCAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISAGWEL*VLSQVG
Trigger: ACCTACTTGGGAGAGAACGCAGAGCTCCCAGCCTGC...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGGCCTGGCTCTCTCCTTaGCAGGTTAGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLAWLSP*QVRRKH
Trigger: GTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGC...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCAAAGGCAGCCTGAATaGATAGAAACGACCACCACC +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCQRQPE*IETTTT
Trigger: GGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTG...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCCAGGGGCTGGGACATaGATGAGGTGCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAPGAGT*MRCSEE
Trigger: CTCCTCCGAGCACCTCATGCATGTCCCAGCCCCTGG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGTGAAGGGATTTGCGTaGTGGCACTGCAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQVKGFA*WHCRLQ
Trigger: CTGCAGTCTGCAGTGCCAGCACGCAAATCCCTTCAC...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCGGGGGCGGAGCTCTaGCTGCCAACTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVAGAEL*LPTEKF
Trigger: GAACTTCTCAGTTGGCAGGCAGAGCTCCGCCCCCGC...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCCTCGCGGGGGCGGAGCTCTaGCTGCCAACTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LQPFCQALPVLWDGPHLLAGAEL*LPTEKF
Trigger: GAACTTCTCAGTTGGCAGGCAGAGCTCCGCCCCCGC...GAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTCTGCGTACTCCTGCGTaGAGGTTTTCTTCACACACC +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALALRTPA*RFSSHT
Trigger: GGTGTGTGAAGAAAACCTCCACGCAGGAGTACGCAG...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTGGTTTGTGGCTCCATaGCCGTCTGCAAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEWFVAP*PSARAR
Trigger: CCGCGCCCTTGCAGACGGCCATGGAGCCACAAACCA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGTGGTTTGTGGCTCCATaGCCGTCTGCAAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLWFVAP*PSARAR
Trigger: CCGCGCCCTTGCAGACGGCCATGGAGCCACAAACCA...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTTGGTTTGTGGCTCCATaGCCGTCTGCAAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAWFVAP*PSARAR
Trigger: CCGCGCCCTTGCAGACGGCCATGGAGCCACAAACCA...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAPHLLW*CCSSLW
Trigger: CCACAGAGAGCTGCAACACCACCACAGAAGATGAGG...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVASLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAESLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLTGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAALTRA*LSPCQV
Trigger: AACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGC...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCCTCGCTTTGCCAGTCCTCTaGGACGGCCCACACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQPFCQALPVLWDGPHLLALPVL*DGPHLL
Trigger: GAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGC...GAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGACACTCTCCAGAATCTaGTGTATACAGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLTLSRI*CIQWLA
Trigger: TGCCAGCCACTGTATACATCAGATTCTGGAGAGTGT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCCTGTTTTCGCACTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAPVFAL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGTGCGAAAACAGG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000351293.7
ENST00000372765.5
ENST00000433289.5
CDS-3UTR TCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTCCTGTTTTCGCACTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAPVFAL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGTGCGAAAACAGG...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000351293.7
ENST00000372765.5
ENST00000433289.5
CDS-3UTR TCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQSDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVCGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGGAGCGGGGCAGCTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAGAGQL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGCTGCCCCGCTCC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322680.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR TCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGGGAAACCAAGGCCATaGCCAATTGCTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGGKPRP*PIAPPL
Trigger: TAATGGAGGAGCAATTGGTCATGGCCTTGGTTTCCC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGGAAACCAAGGCCATaGCCAATTGCTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAGKPRP*PIAPPL
Trigger: TAATGGAGGAGCAATTGGTCATGGCCTTGGTTTCCC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTTTTCTTCACACACCTaGGGACCACAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLFSSHT*GPQRKH
Trigger: GTGCTTTCTCTGTGGTCCGCAGGTGTGTGAAGAAAA...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLTSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKALHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCCTCATACATACTCCTaGCTTCTTGCCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAPHTYS*LLANPR
Trigger: CCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGCGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCT +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAERWVSH*SCQDGP
Trigger: AGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCG...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCGGCCACCTCAGGAGCTaGAATCACATCACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSGHLRS*NHITAP
Trigger: GGGGGCCGTGATGTGATTGCAGCTCCTGAGGTGGCC...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCCTGGCTCTCTCCTTaGCAGGTTAGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAAWLSP*QVRRKH
Trigger: GTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGACACCTCTTCTTCTTaGCAGAGCAGTCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLDTSSS*QSSQVN
Trigger: ATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCTTTGCGTGCTGGCACTaGAGACTGCAGGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACFACWH*RLQGRK
Trigger: TTTCCTGCCCTGCAGTCTGCAGTGCCAGCACGCAAA...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGGGCGGAGCTCTGCCTaGCAACTGAGAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLGRSSA*QLRSSW
Trigger: CCAGGAACTTCTCAGTTGGCAGGCAGAGCTCCGCCC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGTGTGGCTCCATTAGGTaGACGCTGGAACTCGACTTC +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQCGSIR*TLELDF
Trigger: GAAGTCGAGTTCCAGCGTGCACCTAATGGAGCCACA...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322635.7
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGCTGCGTACTCCTGCGTaGAGGTTTTCTTCACACACC +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQLRTPA*RFSSHT
Trigger: GGTGTGTGAAGAAAACCTCCACGCAGGAGTACGCAG...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR CCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCTMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTGGACGATGTCATGCTaGTGGATGTGGTTAACACTC +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLWTMSC*WMWLTL
Trigger: GAGTGTTAACCACATCCACCAGCATGACATCGTCCA...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACSWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLSWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGGCATTAGGTGCACGCTaGAACTCGACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLALGAR*NSTSFS
Trigger: AGAAAAGGAAGTCGAGTTCCAGCGTGCACCTAATGC...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305762.11
ENST00000423381.6
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGTACCACAGTGGTTTGTaGCTCCATGGCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQYHSGL*LHGRLQ
Trigger: TTGCAGACGGCCATGGAGCCACAAACCACTGTGGTA...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCTGCAGGTGGCGGTGGTaGCCATGCTGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSCRWRW*PCWRAG
Trigger: GCCCGCCCGCCAGCATGGCCACCACCGCCACCTGCA...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTGCAGGTGGCGGTGGTaGCCATGCTGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYCRWRW*PCWRAG
Trigger: GCCCGCCCGCCAGCATGGCCACCACCGCCACCTGCA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACGGGTGCAGGTGGCGGTaGTGGCCATGCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYGCRWR*WPCWRA
Trigger: CGCCCGCCAGCATGGCCACCACCGCCACCTGCACCC...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTCTGCTCATGCCAGGATaGACCTCATACATACTCCTG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALALLMPG*TSYILL
Trigger: CAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAG...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCCTCTTCAAGGCCGGTaGGTGAGCCACTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAPLQGR*VSHCSC
Trigger: GCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQFSSAS*RVHFCS
Trigger: GCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAA...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGTCCCACAGGGGCACTTaGCAGAGGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELSHRGT*QRAQAQ
Trigger: CTGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGA...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTCTGGACACCTCTTTTaGGTTACATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISSGHLF*VTCGEG
Trigger: CCCCTCCCCGCATGTAACCCAAAAGAGGTGTCCAGA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGCTAAGAAGTGGGGCTaGAGCAGCCATATGAAGCTA +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGAKKWG*SSHMKL
Trigger: TAGCTTCATATGGCTGCTCCAGCCCCACTTCTTAGC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGAAGAATGCTAAGAAGTaGGGCTGGAGCAGCCATATG +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLKNAKK*GWSSHM
Trigger: CATATGGCTGCTCCAGCCCCACTTCTTAGCATTCTT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTGTTCAATAGGCTTTTaGCAGCTTGCCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISCSIGF*QLARPG
Trigger: GCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR TCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISRVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCGAGCCTGGTCAGCCGTaGTGCGCTTTGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVEPGQP*CALLGL
Trigger: TAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTC...GACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCGGAGCGGGGCAGCTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSGAGQL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGCTGCCCCGCTCC...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGCCCCAAAGGCAGCCTaGATGCATAGAAACGACCAC +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIAPKAA*MHRNDH
Trigger: GTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTTTTGCTGCGTACTCCTaGGTGGAGGTTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAFAAYS*VEVFFT
Trigger: TGTGAAGAAAACCTCCACGCAGGAGTACGCAGCAAA...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGTTTGCTGCGTACTCCTaGGTGGAGGTTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLFAAYS*VEVFFT
Trigger: TGTGAAGAAAACCTCCACGCAGGAGTACGCAGCAAA...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGATTGATGATTTTTGCTaGGTACTCCTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLIDDFC*VLLRGG
Trigger: ACCTCCACGCAGGAGTACGCAGCAAAAATCATCAAT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAALWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: STLNTWPSRPEKVGKVGEVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...TTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCGTGAGCCACTGCTCATaGCAGGATGGACCTCATACA +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISVSHCS*QDGPHT
Trigger: TGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCAC...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCCCACCACTTCTCAGCTaGCTCCACAGCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSPPLLS*LHSRLG
Trigger: TCCCAGCCTGCTGTGGAGGCAGCTGAGAAGTGGTGG...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTGGCGGGTACACTTCTaGAGCACCAATTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISWRVHF*STNSLP
Trigger: GGGAAGAGAATTGGTGCTGCAGAAGTGTACCCGCCA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGACACCTCTTCTTCTTaGCAGAGCAGTCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALADTSSS*QSSQVN
Trigger: ATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGTCAGAAATACTGTCATaGAGGCGCACGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLSEILS*RRTMFG
Trigger: TCCAAACATCGTGCGCCTCCATGACAGTATTTCTGA...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTCAGAAATACTGTCATaGAGGCGCACGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLSEILS*RRTMFG
Trigger: TCCAAACATCGTGCGCCTCCATGACAGTATTTCTGA...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: RHEGRAGGLHAGACIGCCSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...GCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTTGGACGATGTCATGCTaGTGGATGTGGTTAACACTC +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAWTMSC*WMWLTL
Trigger: GAGTGTTAACCACATCCACCAGCATGACATCGTCCA...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGTGGACGATGTCATGCTaGTGGATGTGGTTAACACTC +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLWTMSC*WMWLTL
Trigger: GAGTGTTAACCACATCCACCAGCATGACATCGTCCA...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACPHLLW*CCSSLW
Trigger: CCACAGAGAGCTGCAACACCACCACAGAAGATGAGG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GGGAGGGGAAGTAACCTGTCTGAGGTCATCCAATTTGGAGTCACGGAGCCAGACCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: GRGSNLSEVIQFGVTEPDRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...GTCTGGCTCCGTGACTCCAAATTGGATGACCTCAGACAGGTTACTTCCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAETGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGTGCTCGGAGGAGCCTaGCTAAATCCAAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAVLGGA*LNPSTS
Trigger: GCTGGTGCTTGGATTTAGCCAGGCTCCTCCGAGCAC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGGTGCTCGGAGGAGCCTaGCTAAATCCAAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEVLGGA*LNPSTS
Trigger: GCTGGTGCTTGGATTTAGCCAGGCTCCTCCGAGCAC...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTAAGGGATTTGCGTGCTaGCACTGCAGACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAKGFAC*HCRLQG
Trigger: GCCCTGCAGTCTGCAGTGCCAGCACGCAAATCCCTT...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCTCGACTTCCTTTTCTTaGCACCGCCATCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLSTSFS*HRHPTS
Trigger: AGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGA...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCCTGTTTTCGCACTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLPVFAL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGTGCGAAAACAGG...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCTGTTTTCGCATGGCTaGGGAGCAGAGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKALFSHG*GAERRL
Trigger: CAGCCTTCTCTCTGCTCCTCAGCCATGCGAAAACAG...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322680.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCCTGTTTTCGCATGGCTaGGGAGCAGAGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVLFSHG*GAERRL
Trigger: CAGCCTTCTCTCTGCTCCTCAGCCATGCGAAAACAG...GACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCGGGAAACCAAGGCCATaGCCAATTGCTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLGKPRP*PIAPPL
Trigger: TAATGGAGGAGCAATTGGTCATGGCCTTGGTTTCCC...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGAAGCACCAGCACCTGTaGGTCTGCTCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVKHQHL*VCSLLS
Trigger: GCTGAGAAGAGAGCAGACTCACAGGTGCTGGTGCTT...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGTGGTTTGTGGCTCCTTaGCACCGCCATCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLWFVAP*HRHPTS
Trigger: AGAAGTCGGATGGCGGTGTCAAGGAGCCACAAACCA...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351293.7
ENST00000372765.5
CDS-3UTR TCA 90 bp AGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAATGAGGTGCACCTGTGGCTaGGCTCACTGCAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: RLDLRLESPKAPVKQDRMRCTCG*AHCSGA
Trigger: CGCACCGCTGCAGTGAGCTCAGCCACAGGTGCACCT...CATTCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGTTTGCTGCGTACTCCTaGGTGGAGGTTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQFAAYS*VEVFFT
Trigger: TGTGAAGAAAACCTCCACGCAGGAGTACGCAGCAAA...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTATTGATGATTTTTGCTaGGTACTCCTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALAIDDFC*VLLRGG
Trigger: ACCTCCACGCAGGAGTACGCAGCAAAAATCATCAAT...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGATTGATGATTTTTGCTaGGTACTCCTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLIDDFC*VLLRGG
Trigger: ACCTCCACGCAGGAGTACGCAGCAAAAATCATCAAT...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGGTATTGATGATTTTTaGTGCGTACTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGGIDDF*CVLLRG
Trigger: TCCACGCAGGAGTACGCAGCAAAAATCATCAATACC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGGTATTGATGATTTTTaGTGCGTACTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAAGIDDF*CVLLRG
Trigger: TCCACGCAGGAGTACGCAGCAAAAATCATCAATACC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GGGAGGGGAAGTAACCTGTCTGAGGTCATCCAATTTGGAGTCACGGAGCCAGACTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GRGSNLSEVIQFGVTEPDSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...GTCTGGCTCCGTGACTCCAAATTGGATGACCTCAGACAGGTTACTTCCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACTTCAGGCACCGAGCTaGCATTCCCAGTGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGLQAPS*HSQCGA
Trigger: CGCTCCGCACTGGGAATGGCAGCTCGGTGCCTGAAG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVPPPPS*RDKASI
Trigger: TATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCGCCTGGCTCTCTCCTTaGCAGGTTAGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACAWLSP*QVRRKH
Trigger: GTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGC...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCAAAGGCAGCCTGAATaGATAGAAACGACCACCACC +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACQRQPE*IETTTT
Trigger: GGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTGGGCGGAGCTCTGCCTaGCAACTGAGAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIATILPGFASPLGRPTPGRSSA*QLRSSW
Trigger: CCAGGAACTTCTCAGTTGGCAGGCAGAGCTCCGCCC...AGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAADVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGDVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: RQTRRAGGRAACRGVHWLDVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: TDTKGGREGCMQGRALAASCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...AGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGAAGGGCGCGGGCTCTTaGGCTGGGCTTACGAGACTG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELKGAGS*AGLTRL
Trigger: CAGTCTCGTAAGCCCAGCCCAAGAGCCCGCGCCCTT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCGTTGTGTACCACAGTaGTTTGTGGCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLRCVPQ*FVAPWP
Trigger: CGGCCATGGAGCCACAAACCACTGTGGTACACAACG...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGAAAGGAAGTGAGGCCTaGATCACAAATCTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: QTRRAGGRAACRGVHWLLKGSEA*ITNLRV
Trigger: TACACGAAGATTTGTGATCCAGGCCTCACTTCCTTT...CAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGATCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAATGTGGTAACAGAACATGCAGGTGGCGGTGGTaGCCATGCTGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GWNLLKPLSNRTECGNRTCRWRW*PCWRAG
Trigger: GCCCGCCCGCCAGCATGGCCACCACCGCCACCTGCA...TGTTCTGTTACCACATTCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTCTCCTGTTTTCGCATaGCTGAGGAGCAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISSPVFA*LRSREK
Trigger: CTTCTCTCTGCTCCTCAGCCATGCGAAAACAGGAGA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322680.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGTCTGGACACCTCTTTTaGGTTACATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLSGHLF*VTCGEG
Trigger: CCCCTCCCCGCATGTAACCCAAAAGAGGTGTCCAGA...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGGTAGTCCAGGGAACTaGAATCTACCCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIGSPGN*NLPTFP
Trigger: GGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCAAGAATGCTAAGAAGTaGGGCTGGAGCAGCCATATG +
Preference number: 4 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSKNAKK*GWSSHM
Trigger: CATATGGCTGCTCCAGCCCCACTTCTTAGCATTCTT...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCCTCTGTTCAATAGGCTTTTaGCAGCTTGCCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LQPFCQALPVLWDGPHLLCSIGF*QLARPG
Trigger: GCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA...GAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAERVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVRVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...GACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKARQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVSDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAESDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKASDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp TCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCTCCTATAGAAATGGATaGGTGAGTGCATGTCAGACT +
Preference number: 4 (lower is better)
Translates to: SVQQRQTRRAGGRAACRGSYRNG*VSACQT
Trigger: AGTCTGACATGCACTCACTCATCCATTTCTATAGGA...GCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDAAREP*PGPGSL
Trigger: GAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGC...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGCGGCACGGGAGCCCTaGCCAGGGCCTGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMAAREP*PGPGSL
Trigger: GAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGC...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGGGCCCAGGCCCAGATaGGGGTCAGCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVGPRPR*GSAWGP
Trigger: TGGTCCCCATGCTGACCCTCATCTGGGCCTGGGCCC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGACATGCGGGGAGGGGTaGTGCCCATGCAGATTGTCC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELTCGEG*CPCRLS
Trigger: GGACAATCTGCATGGGCATCACCCCTCCCCGCATGT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCAACGAAACCCTGTGGTaGAGGGATTTGCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSNETLW*RDLRAG
Trigger: GCCAGCACGCAAATCCCTTCACCACAGGGTTTCGTT...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGATTGATGATTTTTGCTaGGTACTCCTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQIDDFC*VLLRGG
Trigger: ACCTCCACGCAGGAGTACGCAGCAAAAATCATCAAT...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLLWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR GCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACLWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLTSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR GCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCGTGCGAGGCCGACCCTaGCCGTCGATGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSVRGRP*PSMYWV
Trigger: CACCCAGTACATCGACGGGCAGGGTCGGCCTCGCAC...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAESNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCTGGCGGGTACACTTCTaGAGCACCAATTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAWRVHF*STNSLP
Trigger: GGGAAGAGAATTGGTGCTGCAGAAGTGTACCCGCCA...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGAAGGCCATGACCAATTaGTCCTCCATTATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RAGGRAACRGVHWLLPLLKAMTN*SSIIFF
Trigger: AAAGAAGATAATGGAGGAGCAATTGGTCATGGCCTT...CAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCTGTGGTGAAGGGATTTaGGTGCTGGCACTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKACGEGI*VLALQT
Trigger: AGTCTGCAGTGCCAGCACGCAAATCCCTTCACCACA...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGGGCGGAGCTCTGCCTaGCAACTGAGAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELGRSSA*QLRSSW
Trigger: CCAGGAACTTCTCAGTTGGCAGGCAGAGCTCCGCCC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAGGGCGGAGCTCTGCCTaGCAACTGAGAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGGRSSA*QLRSSW
Trigger: CCAGGAACTTCTCAGTTGGCAGGCAGAGCTCCGCCC...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGCTGCGTACTCCTGCGTaGAGGTTTTCTTCACACACC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAELRTPA*RFSSHT
Trigger: GGTGTGTGAAGAAAACCTCCACGCAGGAGTACGCAG...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCGAGGCGCACGATGTTTaGATGTTTCAGAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACEAHDV*MFQKST
Trigger: TGTCGACTTCTGAAACATCCAAACATCGTGCGCCTC...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR CCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGTCAGAAATACTGTCATaGAGGCGCACGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQSEILS*RRTMFG
Trigger: TCCAAACATCGTGCGCCTCCATGACAGTATTTCTGA...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISTMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCAAGGGCGCGGGCTCTTaGGCTGGGCTTACGAGACTG +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAKGAGS*AGLTRL
Trigger: CAGTCTCGTAAGCCCAGCCCAAGAGCCCGCGCCCTT...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGAAGGGCGCGGGCTCTTaGGCTGGGCTTACGAGACTG +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVKGAGS*AGLTRL
Trigger: CAGTCTCGTAAGCCCAGCCCAAGAGCCCGCGCCCTT...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGTGGTTTGTGGCTCCATaGCCGTCTGCAAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVWFVAP*PSARAR
Trigger: CCGCGCCCTTGCAGACGGCCATGGAGCCACAAACCA...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGTACCACAGTGGTTTGTaGCTCCATGGCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLYHSGL*LHGRLQ
Trigger: TTGCAGACGGCCATGGAGCCACAAACCACTGTGGTA...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAPHLLW*CCSSLW
Trigger: CCACAGAGAGCTGCAACACCACCACAGAAGATGAGG...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LLQPFCQALPVLWDGPHLGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...GAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGCCCTCCAGAGCCACTaGCTGCGAAGGTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVALQSH*LRRLDL
Trigger: GAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGC...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCTGCAGGTGGCGGTGGTaGCCATGCTGGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALCRWRW*PCWRAG
Trigger: GCCCGCCCGCCAGCATGGCCACCACCGCCACCTGCA...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGGGGTGCAGGTGGCGGTaGTGGCCATGCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKEGCRWR*WPCWRA
Trigger: CGCCCGCCAGCATGGCCACCACCGCCACCTGCACCC...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEFSSAS*RVHFCS
Trigger: GCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGTAGTCCAGGGAACTaGAATCTACCCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAGSPGN*NLPTFP
Trigger: GGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACC...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGGTAGTCCAGGGAACTaGAATCTACCCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLGSPGN*NLPTFP
Trigger: GGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCAAGAATGCTAAGAAGTaGGGCTGGAGCAGCCATATG +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLKNAKK*GWSSHM
Trigger: CATATGGCTGCTCCAGCCCCACTTCTTAGCATTCTT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTACACTCTCCAGAATCTaGTGTATACAGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVITLSRI*CIQWLA
Trigger: TGCCAGCCACTGTATACATCAGATTCTGGAGAGTGT...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCTCGACTTCCTTTTCTTaGCACCGCCATCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKASTSFS*HRHPTS
Trigger: AGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGA...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCTCGACTTCCTTTTCTTaGCACCGCCATCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVSTSFS*HRHPTS
Trigger: AGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGA...GACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCCTGTTTTCGCACTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVPVFAL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGTGCGAAAACAGG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000433289.5
CDS-3UTR TCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRACGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCCTGTTTTCGCATGGCTaGGGAGCAGAGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPLFSHG*GAERRL
Trigger: CAGCCTTCTCTCTGCTCCTCAGCCATGCGAAAACAG...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTGGGGACCACTACCGTaGAAAGGCAAGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAEWGPLP*KGKTKM
Trigger: CATCTTTGTCTTGCCTTTTCACGGTAGTGGTCCCCA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTTGGAATGGAACTCCTTaGGCACAGAGAGGGACAATG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAWNGTP*AQRGTM
Trigger: CATTGTCCCTCTCTGTGCTCAAGGAGTTCCATTCCA...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCAACGAAACCCTGTGGTaGAGGGATTTGCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPNETLW*RDLRAG
Trigger: GCCAGCACGCAAATCCCTTCACCACAGGGTTTCGTT...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTTTTGCTGCGTACTCCTaGGTGGAGGTTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIFAAYS*VEVFFT
Trigger: TGTGAAGAAAACCTCCACGCAGGAGTACGCAGCAAA...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCATTGATGATTTTTGCTaGGTACTCCTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISIDDFC*VLLRGG
Trigger: ACCTCCACGCAGGAGTACGCAGCAAAAATCATCAAT...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR GCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGGCTCCATGGCCGTCTaGAAGGGCGCGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQGSMAV*KGAGSW
Trigger: CCAAGAGCCCGCGCCCTTGCAGACGGCCATGGAGCC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACGGCGGGCGGGAGGGCTaGATGCAGGGGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDGGREG*MQGRAL
Trigger: CAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCC...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATCTTCAGGCACCGAGCTaGCATTCCCAGTGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LNTWPSRPEKVGKVGEANLQAPS*HSQCGA
Trigger: CGCTCCGCACTGGGAATGGCAGCTCGGTGCCTGAAG...ATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTGGGGCTGCATGCCTaGAGAGGGGGCTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSLGLHA*RGGCSV
Trigger: GACAGAACAGCCCCCTCTGCAGGCATGCAGCCCCAG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCATACTCCTGCCTTCTTaGCAACCCAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPILLPS*QPKGCR
Trigger: CCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTAT...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCCTCATACATACTCCTaGCTTCTTGCCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVPHTYS*LLANPR
Trigger: CCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAGG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTCAAAGGCAGCCTGAATaGATAGAAACGACCACCACC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVAQRQPE*IETTTT
Trigger: GGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTG...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACCCAGGGGCTGGGACATaGATGAGGTGCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYPGAGT*MRCSEE
Trigger: CTCCTCCGAGCACCTCATGCATGTCCCAGCCCCTGG...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAGGCGCACGATGTTTaGATGTTTCAGAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIEAHDV*MFQKST
Trigger: TGTCGACTTCTGAAACATCCAAACATCGTGCGCCTC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCTCAGAAATACTGTCATaGAGGCGCACGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLSEILS*RRTMFG
Trigger: TCCAAACATCGTGCGCCTCCATGACAGTATTTCTGA...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTCAGAAATACTGTCATaGAGGCGCACGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISSEILS*RRTMFG
Trigger: TCCAAACATCGTGCGCCTCCATGACAGTATTTCTGA...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp TCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: SGPPEPLAAKVGPPAGISDVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...GGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp AACACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: NTSVQQRQTRRAGGRAACSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...GCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACAAGGGCGCGGGCTCTTaGGCTGGGCTTACGAGACTG +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYKGAGS*AGLTRL
Trigger: CAGTCTCGTAAGCCCAGCCCAAGAGCCCGCGCCCTT...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AAACAGAACCGCCAAAGGCGGCACGGGAGCCCTGACCAGGGCCTGGCTCTCTCCAAAGGAAGTGAGGCCTaGATCACAAATCTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: KQNRQRRHGSPDQGLALSKGSEA*ITNLRV
Trigger: TACACGAAGATTTGTGATCCAGGCCTCACTTCCTTT...GGAGAGAGCCAGGCCCTGGTCAGGGCTCCCGTGCCGCCTTTGGCGGTTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTCTCTTCTGACTGGCTaGTGCGAGGCCGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYSLLTG*CEADPA
Trigger: GGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGCTGCTCATGCCAGGATaGACCTCATACATACTCCTG +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLLLMPG*TSYILL
Trigger: CAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAG...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGCTGCTCATGCCAGGATaGACCTCATACATACTCCTG +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAELLMPG*TSYILL
Trigger: CAGGAGTATGTATGAGGTCCATCCTGGCATGAGCAG...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSFSSAS*RVHFCS
Trigger: GCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAA...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCTCTGGACACCTCTTTTaGGTTACATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPSGHLF*VTCGEG
Trigger: CCCCTCCCCGCATGTAACCCAAAAGAGGTGTCCAGA...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGTGCTCGGAGGAGCCTaGCTAAATCCAAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELVLGGA*LNPSTS
Trigger: GCTGGTGCTTGGATTTAGCCAGGCTCCTCCGAGCAC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGACACTCTCCAGAATCTaGTGTATACAGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVTLSRI*CIQWLA
Trigger: TGCCAGCCACTGTATACATCAGATTCTGGAGAGTGT...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCACACTCTCCAGAATCTaGTGTATACAGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKATLSRI*CIQWLA
Trigger: TGCCAGCCACTGTATACATCAGATTCTGGAGAGTGT...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR TCA 90 bp TTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: LLQPFCQALPVLWDGPHLSDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...GAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATGGAGCGGGGCAGCTTTaGGGTCCTCATCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LNTWPSRPEKVGKVGEANGAGQL*GPHLLW
Trigger: CCACAGAAGATGAGGACCTCAAAGCTGCCCCGCTCC...ATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGGGCCCAGGCCCAGATaGGGGTCAGCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRGPRPR*GSAWGP
Trigger: TGGTCCCCATGCTGACCCTCATCTGGGCCTGGGCCC...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCTGGAATGGAACTCCTTaGGCACAGAGAGGGACAATG +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSWNGTP*AQRGTM
Trigger: CATTGTCCCTCTCTGTGCTCAAGGAGTTCCATTCCA...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGAAGCACCAGCACCTGTaGGTCTGCTCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELKHQHL*VCSLLS
Trigger: GCTGAGAAGAGAGCAGACTCACAGGTGCTGGTGCTT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAAACGAAACCCTGTGGTaGAGGGATTTGCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGNETLW*RDLRAG
Trigger: GCCAGCACGCAAATCCCTTCACCACAGGGTTTCGTT...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTCTCTGCCTTTCTTTaGCAGCTAAGGAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLLSAFL*QLRKQF
Trigger: AAACTGTTTCCTTAGCTGTCAAAGAAAGGCAGAGAG...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGTTTTCTTCACACACCTaGGGACCACAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLFSSHT*GPQRKH
Trigger: GTGCTTTCTCTGTGGTCCGCAGGTGTGTGAAGAAAA...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGGTATTGATGATTTTTaGTGCGTACTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIGIDDF*CVLLRG
Trigger: TCCACGCAGGAGTACGCAGCAAAAATCATCAATACC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVLWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVATSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGCTCTGTGGCATTAGGTaGACGCTGGAACTCGACTTC +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVKQLCGIR*TLELDF
Trigger: GAAGTCGAGTTCCAGCGTGCACCTAATGCCACAGAG...CTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATGCTTAAATACAAAGGCTCCATGGCCGTCTaGAAGGGCGCGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QVGLRRWGKWVKLMLKYKGSMAV*KGAGSW
Trigger: CCAAGAGCCCGCGCCCTTGCAGACGGCCATGGAGCC...TTTGTATTTAAGCATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: LNTWPSRPEKVGKVGEANVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...ATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGACACCTCTTCTTCTTaGCAGAGCAGTCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLDTSSS*QSSQVN
Trigger: ATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGTGAAGGGATTTGCGTaGTGGCACTGCAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELVKGFA*WHCRLQ
Trigger: CTGCAGTCTGCAGTGCCAGCACGCAAATCCCTTCAC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGGAGGCGCACGATGTTTaGATGTTTCAGAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLEAHDV*MFQKST
Trigger: TGTCGACTTCTGAAACATCCAAACATCGTGCGCCTC...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: HWLRRLDLRLESPKAPVATMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...AGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKATMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
ENST00000441192.2
CDS-3UTR CCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGTGGACGATGTCATGCTaGTGGATGTGGTTAACACTC +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVWTMSC*WMWLTL
Trigger: GAGTGTTAACCACATCCACCAGCATGACATCGTCCA...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGATCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRSWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GGGAGGGGAAGTAACCTGTCTGAGGTCATCCAATTTGGAGTCACGGAGCCAGACCGTTGTGTACCACAGTaGTTTGTGGCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GRGSNLSEVIQFGVTEPDRCVPQ*FVAPWP
Trigger: CGGCCATGGAGCCACAAACCACTGTGGTACACAACG...GTCTGGCTCCGTGACTCCAAATTGGATGACCTCAGACAGGTTACTTCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPPHLLW*CCSSLW
Trigger: CCACAGAGAGCTGCAACACCACCACAGAAGATGAGG...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LIATILPGFASPLGRPTPPHLLW*CCSSLW
Trigger: CCACAGAGAGCTGCAACACCACCACAGAAGATGAGG...AGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTaGACCTCCGGCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRATGCEG*TSGWNL
Trigger: GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGACCTCTTCAAGGCCGGTaGGTGAGCCACTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRPLQGR*VSHCSC
Trigger: GCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGG...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCTCTTCAAGGCCGGTaGGTGAGCCACTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSPLQGR*VSHCSC
Trigger: GCATGAGCAGTGGCTCACCCACCGGCCTTGAAGAGG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGGTAGTCCAGGGAACTaGAATCTACCCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPGSPGN*NLPTFP
Trigger: GGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTGCTCTCTTCTCAGCTaGCTCCCAAGTAAACCTGTA +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAECSLLS*LPSKPV
Trigger: TACAGGTTTACTTGGGAGCCAGCTGAGAAGAGAGCA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCAAGGGATTTGCGTGCTaGCACTGCAGACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAKGFAC*HCRLQG
Trigger: GCCCTGCAGTCTGCAGTGCCAGCACGCAAATCCCTT...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTAGCCATATGAAGCTATaGGTCTCAATGAATTCTAAG +
Preference number: 4 (lower is better)
Translates to: ETDTKGGREGCMQGRALASHMKL*VSMNSK
Trigger: CTTAGAATTCATTGAGACCCATAGCTTCATATGGCT...AGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAGTCGGCCTGAGAAGGTaGGGAAAGTGGGTGAAGCTA +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRVGLRR*GKWVKL
Trigger: TAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGAC...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
3UTR CAA 72 bp TCCAAGCATAACTTATTGCAACCATTCTGCCAGGCTTaGCCAGTCCTCTGGGACGGCCCACACCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SKHNLLQPFCQA*PVLWDGPHLLS
Trigger: GGAGAGGAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAAGTTATGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELRVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGAGTGATAGTGGACATTaGGCCACTTGCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELSDSGH*ATCHPD
Trigger: GTCGGGATGGCAAGTGGCTCAATGTCCACTATCACT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGCCGGGCTCTCAGTCCTaGGGCCACCACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQPGSQS*GHHFSA
Trigger: AGCTGAGAAGTGGTGGCCTCAGGACTGAGAGCCCGG...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGGGAAACCAAGGCCATaGCCAATTGCTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPGKPRP*PIAPPL
Trigger: TAATGGAGGAGCAATTGGTCATGGCCTTGGTTTCCC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCGCTCTGCCTGCCAACTaGGAAGTTCCTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAALPAN*EVPGDK
Trigger: CTTGTCTCCAGGAACTTCTCAGTTGGCAGGCAGAGC...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGATTGATGATTTTTGCTaGGTACTCCTGCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLIDDFC*VLLRGG
Trigger: ACCTCCACGCAGGAGTACGCAGCAAAAATCATCAAT...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCGGTATTGATGATTTTTaGTGCGTACTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LQSHWLRRLDLRLESPKAGIDDF*CVLLRG
Trigger: TCCACGCAGGAGTACGCAGCAAAAATCATCAATACC...GGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000441192.2
CDS-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGACTGTTTTTGTTGTTaGTCTGTGGCATTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIDCFCC*SVALGA
Trigger: TGCACCTAATGCCACAGAGCAACAACAAAAACAGTC...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305762.11
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATAGGCGGATGTAGGCGATaGACGCTGCGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIGGCRR*TLRPPQ
Trigger: TTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGGCGGGAGGGCTGCATaGAGGGGCGTGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFGGRAA*RGVHWL
Trigger: CAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGATGGCGGGTACACTTCTaGAGCACCAATTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGWRVHF*STNSLP
Trigger: GGGAAGAGAATTGGTGCTGCAGAAGTGTACCCGCCA...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCAGGCCCTCCAGAGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCATATTAGGGCCCACATaGATTGTGCATCCTATAGAA +
Preference number: 4 (lower is better)
Translates to: LRPSRATGCEGWTSGWNLILGPT*IVHPIE
Trigger: TTCTATAGGATGCACAATGCATGTGGGCCCTAATAT...GAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATA +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHPPPPS*RDKASI
Trigger: TATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCGCCTGGCTCTCTCCTTaGCAGGTTAGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPAWLSP*QVRRKH
Trigger: GTGTTTTCTTCTAACCTGGCAAGGAGAGAGCCAGGC...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACTTTGCGTGCTGGCACTaGAGACTGCAGGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHFACWH*RLQGRK
Trigger: TTTCCTGCCCTGCAGTCTGCAGTGCCAGCACGCAAA...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGTGTGGTGAAGGGATTTaGGTGCTGGCACTGCAGACT +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELCGEGI*VLALQT
Trigger: AGTCTGCAGTGCCAGCACGCAAATCCCTTCACCACA...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAGCGGGGGCGGAGCTCTaGCTGCCAACTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKAGAEL*LPTEKF
Trigger: GAACTTCTCAGTTGGCAGGCAGAGCTCCGCCCCCGC...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGCGGGGGCGGAGCTCTaGCTGCCAACTGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQAGAEL*LPTEKF
Trigger: GAACTTCTCAGTTGGCAGGCAGAGCTCCGCCCCCGC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGACTGCGTACTCCTGCGTaGAGGTTTTCTTCACACACC +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGLRTPA*RFSSHT
Trigger: GGTGTGTGAAGAAAACCTCCACGCAGGAGTACGCAG...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGAGTCAGAAATACTGTCATaGAGGCGCACGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVAESEILS*RRTMFG
Trigger: TCCAAACATCGTGCGCCTCCATGACAGTATTTCTGA...CTCAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGGCTGTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: TGCEGWTSGWNLLKPLWLSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...CAGCCACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSTMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCGCGGGCTCTTGGGCTaGGCTTACGAGACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRARGLLG*AYETVF
Trigger: AAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCG...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGCGCGGGCTCTTGGGCTaGGCTTACGAGACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVRGLLG*AYETVF
Trigger: AAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCG...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGATACCACAGTGGTTTGTaGCTCCATGGCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRYHSGL*LHGRLQ
Trigger: TTGCAGACGGCCATGGAGCCACAAACCACTGTGGTA...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTAAAGGAAGTGAGGCCTaGATCACAAATCTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVIKGSEA*ITNLRV
Trigger: TACACGAAGATTTGTGATCCAGGCCTCACTTCCTTT...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGACGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACCGGGTCTCTTCTGACTaGCTGGTGCGAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDRVSSD*LVRGRP
Trigger: GGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKALTRA*LSPCQV
Trigger: AACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGC...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GGGCGGGAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTAGTCTATACTTCAGTTaGTCAGTAAAGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GREGCMQGRALAAAAFVISLYFS*SVKRPL
Trigger: CAGAGGCCTCTTTACTGACCAACTGAAGTATAGACT...AATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGTACCACAGTGGTTTGTaGCTCCTTGACACCGCCATC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELYHSGL*LLDTAI
Trigger: GATGGCGGTGTCAAGGAGCCACAAACCACTGTGGTA...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351293.7
ENST00000372765.5
CDS-3UTR TCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRARVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGACAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQCGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGATGGGGACCACTACCGTaGAAAGGCAAGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGWGPLP*KGKTKM
Trigger: CATCTTTGTCTTGCCTTTTCACGGTAGTGGTCCCCA...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACGCCCCAAAGGCAGCCTaGATGCATAGAAACGACCAC +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYAPKAA*MHRNDH
Trigger: GTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGC...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATGCTCTGCCTGCCAACTaGGAAGTTCCTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: LNTWPSRPEKVGKVGEANALPAN*EVPGDK
Trigger: CTTGTCTCCAGGAACTTCTCAGTTGGCAGGCAGAGC...ATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGTTTGCTGCGTACTCCTaGGTGGAGGTTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: WLRRLDLRLESPKAPVKQFAAYS*VEVFFT
Trigger: TGTGAAGAAAACCTCCACGCAGGAGTACGCAGCAAA...CTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCTCTGTGGCATTAGGTaGACGCTGGAACTCGACTTC +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRALCGIR*TLELDF
Trigger: GAAGTCGAGTTCCAGCGTGCACCTAATGCCACAGAG...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305762.11
ENST00000423381.6
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRASNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAATACTCCTGCCTTCTTaGCAACCCAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRILLPS*QPKGCR
Trigger: CCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTAT...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATACGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCT +
Preference number: 4 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIRWVSH*SCQDGP
Trigger: AGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCG...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTGGCCACCTCAGGAGCTaGAATCACATCACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFGHLRS*NHITAP
Trigger: GGGGGCCGTGATGTGATTGCAGCTCCTGAGGTGGCC...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CACCTCGGTACAGCAGAGACAGACACGAAGGGCGGGCGGGAGGGCTGCATGCAGATCTTCTTTGCTATCTaGTTAGGGTATAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: HLGTAETDTKGGREGCMQIFFAI*LGYRSL
Trigger: AAGAGATCTATACCCTAAGCAGATAGCAAAGAAGAT...CTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCTTCTCCCAGCTCTCGTaGCTCCTGAAGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSFSQLS*LLKVVQ
Trigger: CTGGACTACCTTCAGGAGGCACGAGAGCTGGGAGAA...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCTTTGCGTGCTGGCACTaGAGACTGCAGGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSFACWH*RLQGRK
Trigger: TTTCCTGCCCTGCAGTCTGCAGTGCCAGCACGCAAA...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGAGTGAAGGGATTTGCGTaGTGGCACTGCAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRVKGFA*WHCRLQ
Trigger: CTGCAGTCTGCAGTGCCAGCACGCAAATCCCTTCAC...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTGTGGTGAAGGGATTTaGGTGCTGGCACTGCAGACT +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRACGEGI*VLALQT
Trigger: AGTCTGCAGTGCCAGCACGCAAATCCCTTCACCACA...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACTGTGGTGAAGGGATTTaGGTGCTGGCACTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHCGEGI*VLALQT
Trigger: AGTCTGCAGTGCCAGCACGCAAATCCCTTCACCACA...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGGGCGGAGCTCTGCCTaGCAACTGAGAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQGRSSA*QLRSSW
Trigger: CCAGGAACTTCTCAGTTGGCAGGCAGAGCTCCGCCC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCGAGGCGCACGATGTTTaGATGTTTCAGAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: LLQPFCQALPVLWDGPHLEAHDV*MFQKST
Trigger: TGTCGACTTCTGAAACATCCAAACATCGTGCGCCTC...GAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCTGGACGATGTCATGCTaGTGGATGTGGTTAACACTC +
Preference number: 4 (lower is better)
Translates to: LLQPFCQALPVLWDGPHLWTMSC*WMWLTL
Trigger: GAGTGTTAACCACATCCACCAGCATGACATCGTCCA...GAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYSWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCCGCGGGCTCTTGGGCTaGGCTTACGAGACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSRGLLG*AYETVF
Trigger: AAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCG...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTACCACAGTGGTTTGTaGCTCCATGGCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAYHSGL*LHGRLQ
Trigger: TTGCAGACGGCCATGGAGCCACAAACCACTGTGGTA...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCGTTGTGTACCACAGTaGTTTGTGGCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSRCVPQ*FVAPWP
Trigger: CGGCCATGGAGCCACAAACCACTGTGGTACACAACG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRAPHLLW*CCSSLW
Trigger: CCACAGAGAGCTGCAACACCACCACAGAAGATGAGG...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGCCTCCACAGCAGGCTaGGAGCTCTGCGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMASTAG*ELCVLS
Trigger: GGAGAGAACGCAGAGCTCCCAGCCTGCTGTGGAGGC...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGGCCTCCACAGCAGGCTaGGAGCTCTGCGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKEASTAG*ELCVLS
Trigger: GGAGAGAACGCAGAGCTCCCAGCCTGCTGTGGAGGC...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCGCCTCCACAGCAGGCTaGGAGCTCTGCGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALASTAG*ELCVLS
Trigger: GGAGAGAACGCAGAGCTCCCAGCCTGCTGTGGAGGC...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCTGCTCTCTTCTCAGCTaGCTCCCAAGTAAACCTGTA +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPCSLLS*LPSKPV
Trigger: TACAGGTTTACTTGGGAGCCAGCTGAGAAGAGAGCA...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAGCTAAGAAGTGGGGCTaGAGCAGCCATATGAAGCTA +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGAKKWG*SSHMKL
Trigger: TAGCTTCATATGGCTGCTCCAGCCCCACTTCTTAGC...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGAAAGCACGCTAAACACATaGCCAAGTCGGCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EGWTSGWNLLKPLSNRTESTLNT*PSRPEK
Trigger: CTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCT...TTCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGAGCCTGGTCAGCCGTaGTGCGCTTTGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQEPGQP*CALLGL
Trigger: TAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKECGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCTGCGGCAGGGGCCCCTaGGCAGTGATAGTGGACATT +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALCGRGP*AVIVDI
Trigger: AATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCA...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGATAGAAATGGATGAGTaGGTGCATGTCAGACTAACA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVIEMDE*VHVRLT
Trigger: TGTTAGTCTGACATGCACTCACTCATCCATTTCTAT...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACTGGGGACCACTACCGTaGAAAGGCAAGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHWGPLP*KGKTKM
Trigger: CATCTTTGTCTTGCCTTTTCACGGTAGTGGTCCCCA...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTATTGCAACCATTCTGCCAGGCTTTGCCAGTCCTCTGGGACGGCCCACACCTCGGTATTGATGATTTTTaGTGCGTACTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LLQPFCQALPVLWDGPHLGIDDF*CVLLRG
Trigger: TCCACGCAGGAGTACGCAGCAAAAATCATCAATACC...GAGGTGTGGGCCGTCCCAGAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELTSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp GGGAGGGGAAGTAACCTGTCTGAGGTCATCCAATTTGGAGTCACGGAGCCAGACACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: GRGSNLSEVIQFGVTEPDTSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...GTCTGGCTCCGTGACTCCAAATTGGATGACCTCAGACAGGTTACTTCCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTTCCAGAGCCACTGGCTaGGAAGGTTGGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFSRATG*EGWTSG
Trigger: GCCGGAGGTCCAACCTTCGCAGCCAGTGGCTCTGGA...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCTGCATGCAGGGGCGTaGATTGGCTGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALLHAGA*IGCCRF
Trigger: AAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAG...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCGTGAGCCACTGCTCATaGCAGGATGGACCTCATACA +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSVSHCS*QDGPHT
Trigger: TGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCAC...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACCTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AGCCACTGGCTGCGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTGATATTAGGGCCCACATaGATTGTGCATCCTATAGAA +
Preference number: 4 (lower is better)
Translates to: SHWLRRLDLRLESPKAPVILGPT*IVHPIE
Trigger: TTCTATAGGATGCACAATGCATGTGGGCCCTAATAT...CACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCGCAGCCAGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCAAAGGCAGCCTGAATaGATAGAAACGACCACCACC +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHQRQPE*IETTTT
Trigger: GGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTTTCTCCCAGCTCTCGTaGCTCCTGAAGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVFSQLS*LLKVVQ
Trigger: CTGGACTACCTTCAGGAGGCACGAGAGCTGGGAGAA...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGATTATTGCAACCATTCTaGCAGGCTTTGCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRLLQPF*QALPVL
Trigger: GAGGACTGGCAAAGCCTGGCAGAATGGTTGCAATAA...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAGAGGCGCACGATGTTTaGATGTTTCAGAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGEAHDV*MFQKST
Trigger: TGTCGACTTCTGAAACATCCAAACATCGTGCGCCTC...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AGGCAGCCCCAAAGGCAGCCTGAATGCATAGAAACGACCACCACCTCTTCTCCCTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: RQPQRQPECIETTTTSSPSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...GGGAGAAGAGGTGGTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELTMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp AGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAACGATGTCATGCTGGTaGATGTGGTTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: STLNTWPSRPEKVGKVGETMSCW*MWLTLS
Trigger: GGAGAGTGTTAACCACATCCACCAGCATGACATCGT...TTCACCCACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CCCCTGTCAAACAGGACAGAATGTGGTAACAGAACAGAGGACAATGAGCACACAGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: PLSNRTECGNRTEDNEHTGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...TGTGTGCTCATTGTCCTCTGTTCTGTTACCACATTCTGTCCTGTTTGACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTACCACAGTGGTTTGTaGCTCCATGGCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYYHSGL*LHGRLQ
Trigger: TTGCAGACGGCCATGGAGCCACAAACCACTGTGGTA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAGGTTGGACCTCCGGCTaGAATCTCCTAAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKGWTSG*NLLKPL
Trigger: CAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACC...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCTTCTCATCGGCTTCATaGCGGGTACACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSFSSAS*RVHFCS
Trigger: GCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAA...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGCCCTGACCAGGGCCTaGCTCTCTCCTTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFALTRA*LSPCQV
Trigger: AACCTGGCAAGGAGAGAGCCAGGCCCTGGTCAGGGC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGCGTTGTGTACCACAGTaGTTTGTGGCTCCATTAGGT +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELRCVPQ*FVAPLG
Trigger: ACCTAATGGAGCCACAAACCACTGTGGTACACAACG...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322635.7
CDS-3UTR CCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCTACCACAGTGGTTTGTaGCTCCTTGACACCGCCATC +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSYHSGL*LLDTAI
Trigger: GATGGCGGTGTCAAGGAGCCACAAACCACTGTGGTA...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351293.7
ENST00000372765.5
CDS-3UTR TCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCGAGCCTGGTCAGCCGTaGTGCGCTTTGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALEPGQP*CALLGL
Trigger: TAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTC...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGAGCCTGGTCAGCCGTaGTGCGCTTTGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKREPGQP*CALLGL
Trigger: TAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTC...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCGTTTTCTCCGGGCATTaGACTTGCGCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSVFSGH*TCANTP
Trigger: TGGAGTGTTTGCGCAAGTTCAATGCCCGGAGAAAAC...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTCGACTTCCTTTTCTTaGCACCGCCATCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYSTSFS*HRHPTS
Trigger: AGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACCAGGCTCAAAGGAAGTaGGGCCTGGATCACAAATCT +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYQAQRK*GLDHKS
Trigger: AGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTG...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CACATCACGGCCCCCAAAGCTCTGTCAGAGTTCTTGCCTGGTCCCCCTAAGTCCATAGAAATGGATGAGTaGGTGCATGTCAGACTAACA +
Preference number: 4 (lower is better)
Translates to: HITAPKALSEFLPGPPKSIEMDE*VHVRLT
Trigger: TGTTAGTCTGACATGCACTCACTCATCCATTTCTAT...GGACTTAGGGGGACCAGGCAAGAACTCTGACAGAGCTTTGGGGGCCGTGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGGGGACCACTACCGTaGAAAGGCAAGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRWGPLP*KGKTKM
Trigger: CATCTTTGTCTTGCCTTTTCACGGTAGTGGTCCCCA...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACTGGAATGGAACTCCTTaGGCACAGAGAGGGACAATG +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYWNGTP*AQRGTM
Trigger: CATTGTCCCTCTCTGTGCTCAAGGAGTTCCATTCCA...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CGAAGGTTGGACCTCCGGCTGGAATCTCCTAAAGCCCCTGTCAAACAGGACAGACTCACAATGATTAAATaGGGTAGGCACCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RRLDLRLESPKAPVKQDRLTMIK*GRHHSL
Trigger: CAGAGAGTGGTGCCTACCTCATTTAATCATTGTGAG...TCTGTCCTGTTTGACAGGGGCTTTAGGAGATTCCAGCCGGAGGTCCAACCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHLWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVLWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTACATGCGGGGAGGGGTGATGCCCATGCAGATTGTCCAGCAGTAAGTCTATACAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: LHAGRGDAHADCPAVSLYKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...GTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCTCCCCGCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRATSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AAGCCCCTGTCAAACAGGACAGAATGTGGTAACAGAACAGAGGACAATGAGCACCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KPLSNRTECGNRTEDNEHLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...GTGCTCATTGTCCTCTGTTCTGTTACCACATTCTGTCCTGTTTGACAGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGTAGGCGATGCACGCTaGGTCCTCCCCAATCACGTG +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFVGDAR*VLPNHV
Trigger: CACGTGATTGGGGAGGACGCAGCGTGCATCGCCTAC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGTGAGCCACTGCTCATaGCAGGATGGACCTCATACA +
Preference number: 4 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVVSHCS*QDGPHT
Trigger: TGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCAC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTCGGTGGGTGAGCCACTaGTCATGCCAGGATGGACCT +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFRWVSH*SCQDGP
Trigger: AGGTCCATCCTGGCATGAGCAGTGGCTCACCCACCG...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGGCAGGCTGGGAGCTCTaGGTTCTCTCCCAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKEAGWEL*VLSQVG
Trigger: ACCTACTTGGGAGAGAACGCAGAGCTCCCAGCCTGC...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCAGGCTGGGAGCTCTaGGTTCTCTCCCAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRAGWEL*VLSQVG
Trigger: ACCTACTTGGGAGAGAACGCAGAGCTCCCAGCCTGC...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACGCAGGCTGGGAGCTCTaGGTTCTCTCCCAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDAGWEL*VLSQVG
Trigger: ACCTACTTGGGAGAGAACGCAGAGCTCCCAGCCTGC...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACGACACCTCTTCTTCTTaGCAGAGCAGTCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHDTSSS*QSSQVN
Trigger: ATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATATTCTCCCAGCTCTCGTaGCTCCTGAAGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQIFSQLS*LLKVVQ
Trigger: CTGGACTACCTTCAGGAGGCACGAGAGCTGGGAGAA...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGDVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GGGAGGGGAAGTAACCTGTCTGAGGTCATCCAATTTGGAGTCACGGAGCCAGACTCATGCTGGTGGATGTaGTTAACACTCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GRGSNLSEVIQFGVTEPDSCWWM*LTLSRI
Trigger: GATTCTGGAGAGTGTTAACCACATCCACCAGCATGA...GTCTGGCTCCGTGACTCCAAATTGGATGACCTCAGACAGGTTACTTCCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQSWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATGTTTGTGCAGATATCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: GNWNLPTFPPKVEMFVQISWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...TATCTGCACAAACATCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCGCTAAGAAGTGGGGCTaGAGCAGCCATATGAAGCTA +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSAKKWG*SSHMKL
Trigger: TAGCTTCATATGGCTGCTCCAGCCCCACTTCTTAGC...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACAAGAATGCTAAGAAGTaGGGCTGGAGCAGCCATATG +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHKNAKK*GWSSHM
Trigger: CATATGGCTGCTCCAGCCCCACTTCTTAGCATTCTT...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGTGTTCAATAGGCTTTTaGCAGCTTGCCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQCSIGF*QLARPG
Trigger: GCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCGGAGGATATACAGGATaGCCCCGCAGGCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALGGYTG*PRRPRY
Trigger: ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCC...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR TCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAAAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCCCCAAAGGCAGCCTaGATGCATAGAAACGACCAC +
Preference number: 4 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRAPKAA*MHRNDH
Trigger: GTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGC...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCGCCCCAAAGGCAGCCTaGATGCATAGAAACGACCAC +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALAPKAA*MHRNDH
Trigger: GTGGTCGTTTCTATGCATTCAGGCTGCCTTTGGGGC...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCAAGCACCAGCACCTGTaGGTCTGCTCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALKHQHL*VCSLLS
Trigger: GCTGAGAAGAGAGCAGACTCACAGGTGCTGGTGCTT...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACGCTCTGCCTGCCAACTaGGAAGTTCCTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDALPAN*EVPGDK
Trigger: CTTGTCTCCAGGAACTTCTCAGTTGGCAGGCAGAGC...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000423381.6
CDS-3UTR TCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGGCTCTGCCTGCCAACTaGGAAGTTCCTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKEALPAN*EVPGDK
Trigger: CTTGTCTCCAGGAACTTCTCAGTTGGCAGGCAGAGC...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322635.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCTTTTCTTCACACACCTaGGGACCACAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSFSSHT*GPQRKH
Trigger: GTGCTTTCTCTGTGGTCCGCAGGTGTGTGAAGAAAA...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGATTTGCTGCGTACTCCTaGGTGGAGGTTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRFAAYS*VEVFFT
Trigger: TGTGAAGAAAACCTCCACGCAGGAGTACGCAGCAAA...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCTGTGGACGATGTCATaGTGGTGGATGTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSLWTMS*WWMWLT
Trigger: TGTTAACCACATCCACCAGCATGACATCGTCCACAG...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp AAGCCCCTGTCAAACAGGACAGAATGTGGTAACAGAACAGAGGACAATGAGCACCCAAACCAAGCCTGCTaGTCTCCCTGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: KPLSNRTECGNRTEDNEHPNQAC*SPCTSM
Trigger: CATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGG...GTGCTCATTGTCCTCTGTTCTGTTACCACATTCTGTCCTGTTTGACAGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp TGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCACAAGTAACCTGGGGTaGCAGCAAAACCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: CFKPQTNRTAAVTQALQSTSNLG*QQNQTK
Trigger: CTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGT...GCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCTTCTGTGGTGGTGTTaGAGCTCTCTGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALLLWWC*SSLWSP
Trigger: AGGGCTCCACAGAGAGCTGCAACACCACCACAGAAG...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR GCA 90 bp ACAATGAGCACACAGATGAGTTCCAGCGACTTTAGCACGCTAAACACATGGCCATCAAACAAACAGGACTaGCGCTGTCACTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TMSTQMSSSDFSTLNTWPSNKQD*RCHSGP
Trigger: AGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGA...TGGCCATGTGTTTAGCGTGCTAAAGTCGCTGGAACTCATCTGTGTGCTCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGATACTCCTGCCTTCTTaGCAACCCAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMILLPS*QPKGCR
Trigger: CCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTAT...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGCTCTGTCAGAGTTCTTaGCTGGTCCCCCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQLCQSS*LVPLSP
Trigger: TGGACTTAGGGGGACCAGGCAAGAACTCTGACAGAG...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATA +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALPPPPS*RDKASI
Trigger: TATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGG...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTCCTCCCCCTCCTAGCTaGAGGGATAAGGCCTCAATA +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFPPPPS*RDKASI
Trigger: TATTGAGGCCTTATCCCTGCAGCTAGGAGGGGGAGG...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGACTTCTCCCAGCTCTCGTaGCTCCTGAAGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLARAVRSISKTGKEMDFSQLS*LLKVVQ
Trigger: CTGGACTACCTTCAGGAGGCACGAGAGCTGGGAGAA...GTCCATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTTTTGCGTGCTGGCACTaGAGACTGCAGGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFFACWH*RLQGRK
Trigger: TTTCCTGCCCTGCAGTCTGCAGTGCCAGCACGCAAA...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTCATACATACTCCTGCCTTCTTGCCAACCCAAGGGCTGTCGGTGGTTTTAAAACTGCGTACTCCTGCGTaGAGGTTTTCTTCACACACC +
Preference number: 4 (lower is better)
Translates to: LIHTPAFLPTQGLSVVLKLRTPA*RFSSHT
Trigger: GGTGTGTGAAGAAAACCTCCACGCAGGAGTACGCAG...TTTTAAAACCACCGACAGCCCTTGGGTTGGCAAGAAGGCAGGAGTATGTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGAGCCGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: VLNLKQTGLPLSLRPSRADVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...GGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp GACTTTAGCACGCTAAACACATGGCCAAGTCGGCCTGAGAAGGTGGGGAAAGTGGATGTATACAGTGGCTaGCATCTGCTTCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: DFSTLNTWPSRPEKVGKVDVYSG*HLLHCS
Trigger: ACTACAGTGAAGCAGATGCCAGCCACTGTATACATC...CACTTTCCCCACCTTCTCAGGCCGACTTGGCCATGTGTTTAGCGTGCTAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTGGGTGCTTGAGAGCCTaGTCAGCCGTGATGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFGCLRA*SAVMRF
Trigger: AAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCC...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALSWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGTCATGGATGCCACCGTaGATCGTTGACAGACCCACG +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKESWMPP*IVDRPT
Trigger: CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGA...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp AATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCAGCCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: NCFKPQTNRTAAVTQALQPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...CTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACAATGAGCACACAGATGAGTTCCAGCGACTTTAGCACGCTAAACACATGGCCACCTGACGATGCATCATaGATGCCACCGTGGATCGTT +
Preference number: 4 (lower is better)
Translates to: TMSTQMSSSDFSTLNTWPPDDAS*MPPWIV
Trigger: AACGATCCACGGTGGCATCCATGATGCATCGTCAGG...TGGCCATGTGTTTAGCGTGCTAAAGTCGCTGGAACTCATCTGTGTGCTCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR CCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCCGCGGGCTCTTGGGCTaGGCTTACGAGACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALRGLLG*AYETVF
Trigger: AAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCG...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGCGCGGGCTCTTGGGCTaGGCTTACGAGACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMRGLLG*AYETVF
Trigger: AAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCG...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGACGTTGTGTACCACAGTaGTTTGTGGCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: DTSSSCQSSQVNLKDRKRRCVPQ*FVAPWP
Trigger: CGGCCATGGAGCCACAAACCACTGTGGTACACAACG...TCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGCGTTGTGTACCACAGTaGTTTGTGGCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMRCVPQ*FVAPWP
Trigger: CGGCCATGGAGCCACAAACCACTGTGGTACACAACG...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322680.7
ENST00000423381.6
CDS-3UTR CCA 90 bp GAGGGCTGCATGCAGGGGCGTGCATTGGCTGCTGCCGCTTTTGTAATTGAATTGAAAGGAAGTGAGGCCTaGATCACAAATCTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: EGCMQGRALAAAAFVIELKGSEA*ITNLRV
Trigger: TACACGAAGATTTGTGATCCAGGCCTCACTTCCTTT...CAATTCAATTACAAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000305762.11
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000372765.5
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTTCTGGACACCTCTTTTaGGTTACATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFSGHLF*VTCGEG
Trigger: CCCCTCCCCGCATGTAACCCAAAAGAGGTGTCCAGA...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTAAGACCATTTGTCTTCAAGCCAGCAAAACGAAACCCTGTGGTGAAGGGATTTAAGGGATTTGCGTGCTaGCACTGCAGACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRPFVFKPAKRNPVVKGFKGFAC*HCRLQG
Trigger: GCCCTGCAGTCTGCAGTGCCAGCACGCAAATCCCTT...AAATCCCTTCACCACAGGGTTTCGTTTTGCTGGCTTGAAGACAAATGGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCTGTTCAATAGGCTTTTaGCAGCTTGCCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALCSIGF*QLARPG
Trigger: GCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000372765.5
ENST00000394762.7
ENST00000423381.6
CDS-3UTR CCA 90 bp CTGAAGGTAGTCCAGGGAACTGGAATCTACCCACCTTTCCCCCAAAAGTGGAGACCATTAGGTGCACGCTaGAACTCGACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKVVQGTGIYPPFPQKWRPLGAR*NSTSFS
Trigger: AGAAAAGGAAGTCGAGTTCCAGCGTGCACCTAATGG...TCTCCACTTTTGGGGGAAAGGTGGGTAGATTCCAGTTCCCTGGACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322635.7
CDS-3UTR TCA 90 bp CCAACCCAAGGGCTGTCGGTGGTTTTAAAACGCATCATGGTATGGATTCCTTTTCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTQGLSVVLKRIMVWIPFRVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...AAAAGGAATCCATACCATGATGCGTTTTAAAACCACCGACAGCCCTTGGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCGTGTCCCATTCTGGTaGTGGGAAATCATAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKERVPFW*WEIIGS
Trigger: GGAGCCTATGATTTCCCATCACCAGAATGGGACACG...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp CAAGTCGGCCTGAGAAGGTGGGGAAAGTGGGTGAAGCTAATGCTTAAATACAAAAGACAAGCATGGTCGTaGGGATGGCACCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QVGLRRWGKWVKLMLKYKRQAWS*GWHPSV
Trigger: AACTGAAGGGTGCCATCCTCACGACCATGCTTGTCT...TTTGTATTTAAGCATTAGCTTCACCCACTTTCCCCACCTTCTCAGGCCGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR TCA 90 bp CAGACTAACACGAGGTTTCTCATCGGCTTCATGGCGGGTACACTTCTGCAGCACTCCTATAGAAATGGATaGGTGAGTGCATGTCAGACT +
Preference number: 4 (lower is better)
Translates to: QTNTRFLIGFMAGTLLQHSYRNG*VSACQT
Trigger: AGTCTGACATGCACTCACTCATCCATTTCTATAGGA...GTGCTGCAGAAGTGTACCCGCCATGAAGCCGATGAGAAACCTCGTGTTAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR TCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAAGCTATGGGTCTCAATaGATTCTAAGACCATTTGTC +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGSYGSQ*ILRPFV
Trigger: GACAAATGGTCTTAGAATTCATTGAGACCCATAGCT...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTTTTTCTTCACACACCTaGGGACCACAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVFSSHT*GPQRKH
Trigger: GTGCTTTCTCTGTGGTCCGCAGGTGTGTGAAGAAAA...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp TCTGATGGTCACGATGTTCTCATCAGCCCCATTCTAGGCGCCTATGCAAGTTCCGGTATTGATGATTTTTaGTGCGTACTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: SDGHDVLISPILGAYASSGIDDF*CVLLRG
Trigger: TCCACGCAGGAGTACGCAGCAAAAATCATCAATACC...GGAACTTGCATAGGCGCCTAGAATGGGGCTGATGAGAACATCGTGACCATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp AAGCCCCTGTCAAACAGGACAGAATGTGGTAACAGAACAGAGGACAATGAGCACAAACCAAACCAAGCCTaGTGCTCTCCCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: KPLSNRTECGNRTEDNEHKPNQA*CSPCTS
Trigger: CGAAGTACAGGGAGAGCAGCAGGCTTGGTTTGGTTT...GTGCTCATTGTCCTCTGTTCTGTTACCACATTCTGTCCTGTTTGACAGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441192.2
CDS-3UTR GCA 90 bp CCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGATGGTGAGCCACTGCTCATaGCAGGATGGACCTCATACA +
Preference number: 4 (lower is better)
Translates to: PLLLARAVRSISKTGKEMVSHCS*QDGPHT
Trigger: TGTATGAGGTCCATCCTGGCATGAGCAGTGGCTCAC...CATCTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGTGGCGGGTACACTTCTaGAGCACCAATTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPLLLARAVRSISKTGKEWRVHF*STNSLP
Trigger: GGGAAGAGAATTGGTGCTGCAGAAGTGTACCCGCCA...CTCTTTTCCTGTCTTTGAGATTGACCTGACTGCTCTGGCAAGAAGAAGAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR GCA 90 bp GACAAAGATGGTCCAGATCAGCACAGAAACAGAACCGCCAAAGGCGGCACGGGAATATTAGGGCCCACATaGATTGTGCATCCTATAGAA +
Preference number: 4 (lower is better)
Translates to: DKDGPDQHRNRTAKGGTGILGPT*IVHPIE
Trigger: TTCTATAGGATGCACAATGCATGTGGGCCCTAATAT...TCCCGTGCCGCCTTTGGCGGTTCTGTTTCTGTGCTGATCTGGACCATCTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp ACAGAGAGGGACAATGAAGGTAGAAGCCTTGGCTCTGGACACCTCTTTTGGGTTGAGGCGCACGATGTTTaGATGTTTCAGAAGTCGACA +
Preference number: 4 (lower is better)
Translates to: TERDNEGRSLGSGHLFWVEAHDV*MFQKST
Trigger: TGTCGACTTCTGAAACATCCAAACATCGTGCGCCTC...AACCCAAAAGAGGTGTCCAGAGCCAAGGCTTCTACCTTCATTGTCCCTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322635.7
ENST00000322680.7
ENST00000351293.7
ENST00000423381.6
CDS-3UTR CCA 90 bp TTGAATTGTTTTAAACCTCAAACAAACAGGACTGCCGCTGTCACTCAGGCCCTCTACCACAGTGGTTTGTaGCTCCATGGCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LNCFKPQTNRTAAVTQALYHSGL*LHGRLQ
Trigger: TTGCAGACGGCCATGGAGCCACAAACCACTGTGGTA...GAGGGCCTGAGTGACAGCGGCAGTCCTGTTTGTTTGAGGTTTAAAACAATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305762.11
ENST00000322680.7
ENST00000394762.7
ENST00000423381.6
ENST00000433289.5
CDS-3UTR CCA 90 bp ACACCTCTTCTTCTTGCCAGAGCAGTCAGGTCAATCTCAAAGACAGGAAAAGAGCCTCATCTTCTGTGGTaGTGTTGCAGCTCTCTGTGG +
Preference number: 4 (lower is better)