RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMK2A (Homo sapiens)

Ensembl gene IDs: ENSG00000070808

Ensembl transcript IDs: ENST00000348628.10, ENST00000348628.11, ENST00000351010.6, ENST00000398376.8, ENST00000507995.1, ENST00000508662.5, ENST00000510347.2, ENST00000515758.2, ENST00000671881.1, ENST00000672089.1, ENST00000672396.1, ENST00000672404.2, ENST00000672479.1, ENST00000672752.1, ENST00000672785.1, ENST00000672829.1, ENST00000682786.1, ENST00000683115.1, ENST00000683273.1, ENST00000683332.1, ENST00000683506.1, ENST00000684093.1, ENST00000684431.1, ENST00000684465.1

Found 1162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACATCAGGATCATCCCTGGTGCCCTGTGGTGGCACCAGGTGGCTaGCCACCCACAGGCGTGGCCTTCACAGTGGGGGCCATCTCAGCC +
Preference number: 1 (lower is better)
Translates to: PHQDHPWCPVVAPGG*PPTGVAFTVGAISA
Trigger: GGCTGAGATGGCCCCCACTGTGAAGGCCACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACAGGGCACCAGGGATGATCCTGATGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 90 bp GTCTCCCCTGCCTGCCACATCAGGATCATCCCTGGTGCCCTGTGGTaGCACCAGGTGGCTGCCCACCCACAGGCGTGGCCTTCACAGTGG +
Preference number: 1 (lower is better)
Translates to: VSPACHIRIIPGALW*HQVAAHPQAWPSQW
Trigger: CCACTGTGAAGGCCACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACAGGGCACCAGGGATGATCCTGATGTGGCAGGCAGGGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR GCA 90 bp GCGTGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTaGCTCCACTTCTCTGGCACTTGGAGAGTGACACAGTGGACAGGA +
Preference number: 1 (lower is better)
Translates to: AWPSQWGPSQPGVAI*LHFSGTWRVTQWTG
Trigger: TCCTGTCCACTGTGTCACTCTCCAAGTGCCAGAGAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR GCA 90 bp TCTGGTGAGGGTAGGCTCTGGGCAGATTTTTCTGTGAGTCTCCCCTaGCTGCCACATCAGGATCATCCCTGGTGCCCTGTGGTGGCACCA +
Preference number: 1 (lower is better)
Translates to: SGEGRLWADFSVSLP*LPHQDHPWCPVVAP
Trigger: TGGTGCCACCACAGGGCACCAGGGATGATCCTGATGTGGCAGGCAGGGGAGACTCACAGAAAAATCTGCCCAGAGCCTACCCTCACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 90 bp CAGGAGGAAGAAGACTTAGGGGAGCACTTTGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGG +
Preference number: 1 (lower is better)
Translates to: QEEEDLGEHFEAGGS*RMLFSPLLQCGWLR
Trigger: CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAGTCTTCTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR CCA 90 bp CTCATCCCCCAAAAGGGTCTCCCTTTGAAGGGAGACAGGAGGCCTTaGGTCAGGATTCGCACCATGGTGGGCACAAACCCAGGAGAACAC +
Preference number: 1 (lower is better)
Translates to: LIPQKGLPLKGDRRP*VRIRTMVGTNPGEH
Trigger: GTGTTCTCCTGGGTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAAAGGGAGACCCTTTTGGGGGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR TCA 90 bp CACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTCTGTaGGTCTCCCCTGCCTGCCACATCAGGATCATCCCTGGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: HRVCLVRVGSGQIFL*VSPACHIRIIPGAL
Trigger: CAGGGCACCAGGGATGATCCTGATGTGGCAGGCAGGGGAGACTCACAGAAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR GCA 90 bp TGGGGAGAGCTCAGAAAATCTCGGATCAAACATCCTCACCAGTTCTaGTCCAACCAACACCCAGGAGGGTCGAGGGTACCGGAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: WGELRKSRIKHPHQF*SNQHPGGSRVPEPP
Trigger: AGGAGGCTCCGGTACCCTCGACCCTCCTGGGTGTTGGTTGGAGCAGAACTGGTGAGGATGTTTGATCCGAGATTTTCTGAGCTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR TCA 90 bp GAACTTGCCCAAGGTCACACAGCAAGTCTGGTCAGAGCTGGGAATTaGAGCCTACTCACCCCAAATCACTGCTCTTTCCCCTGCAGTCCA +
Preference number: 1 (lower is better)
Translates to: ELAQGHTASLVRAGN*SLLTPNHCSFPCSP
Trigger: TGGACTGCAGGGGAAAGAGCAGTGATTTGGGGTGAGTAGGCTTCAATTCCCAGCTCTGACCAGACTTGCTGTGTGACCTTGGGCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR GCA 90 bp GAAAAGTCCAGGTATTTCCATCCTGACAGCCTCCCTCCTCCTCTCTaGCCTGACTTGCTGTTCCTGAGTCAGTGCTGGCATCTGATGCTT +
Preference number: 1 (lower is better)
Translates to: EKSRYFHPDSLPPPL*PDLLFLSQCWHLML
Trigger: AAGCATCAGATGCCAGCACTGACTCAGGAACAGCAAGTCAGGGCAGAGAGGAGGAGGGAGGCTGTCAGGATGGAAATACCTGGACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR TCA 90 bp GGAAAAGAAAGAGAGAATGCGAACCCGAGGCTGCAGGATGAGGCATaGAGAGTAGAAATTCCCAGTGCTTTGCTGTGGTCATCAGACGCC +
Preference number: 1 (lower is better)
Translates to: GKERENANPRLQDEA*RVEIPSALLWSSDA
Trigger: GGCGTCTGATGACCACAGCAAAGCACTGGGAATTTCTACTCTTCATGCCTCATCCTGCAGCCTCGGGTTCGCATTCTCTCTTTCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR CCA 90 bp TGGGCAGCAGGACTTGAGAAAAGAACCCAGCAGACAGCTGGTGATTaGGGAGAGCTCAGAAAATCTCGGATCAAACATCCTCACCAGTTC +
Preference number: 1 (lower is better)
Translates to: WAAGLEKRTQQTAGD*GELRKSRIKHPHQF
Trigger: GAACTGGTGAGGATGTTTGATCCGAGATTTTCTGAGCTCTCCCCAATCACCAGCTGTCTGCTGGGTTCTTTTCTCAAGTCCTGCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR TCA 90 bp GGAAAGAGGAAAAGAAAGAGAGAATGCGAACCCGAGGCTGCAGGATaGGGCATGAAGAGTAGAAATTCCCAGTGCTTTGCTGTGGTCATC +
Preference number: 1 (lower is better)
Translates to: GKRKRKRECEPEAAG*GMKSRNSQCFAVVI
Trigger: GATGACCACAGCAAAGCACTGGGAATTTCTACTCTTCATGCCTCATCCTGCAGCCTCGGGTTCGCATTCTCTCTTTCTTTTCCTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGAGCCTGGTCCCTCAGTaGGGCAGGACGGAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQSLVPQ*GRTEGA
Trigger: GGCGCCCTCCGTCCTGCCCCACTGAGGGACCAGGCT...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR CCA 90 bp ACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAACTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: TEMAERPFSPELSPPWPQLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...TTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 2 (lower is better)
Translates to: LGEPAAPLHGQSGSLRHSRLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...GCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR TCA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: DRNGREALLPGAESTLAPVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 2 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp TGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTCGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: WPSQWGPSQPGVAICLHFVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...GAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp TGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTCCCTTCTCCCCGGAGCTaGGTCCACCTTGGCCCCAAT +
Preference number: 2 (lower is better)
Translates to: WPSQWGPSQPGVAICLHFPSPRS*VHLGPN
Trigger: ATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGG...GAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR GCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: ERATSPTPREGSDHPEVSLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 2 (lower is better)
Translates to: ERATSPTPREGSDHPEVSRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCTGGAAGTGGACGATCTaGCATTTGCCATCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: ERATSPTPREGSDHPEVSWKWTI*HLPSRR
Trigger: CCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCA...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR CCA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: DRNGREALLPGAESTLAPEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTCGGGTCTCCTCCGACTaGGCGGTGCGTGGGATGCCG +
Preference number: 2 (lower is better)
Translates to: QKERLCQLTLGPKWQRGPRVSSD*AVRGMP
Trigger: CGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCG...AGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR GCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 2 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCACTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: DRNGREALLPGAESTLAPLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 2 (lower is better)
Translates to: RECHLPFPGDTGRGEVWEGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp ACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAAGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 2 (lower is better)
Translates to: TEMAERPFSPELSPPWPQGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...TTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp TGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTCGGGCAGCAAGGTCTCTaGCAAGGACAGAGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: WPSQWGPSQPGVAICLHFGQQGL*QGQRPV
Trigger: CACTGGCCTCTGTCCTTGGCAGAGACCTTGCTGCCC...GAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp GTGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTAGGTGGGGGAGGGGATaGAGCCTGACCAGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: VAFTVGAISAWGSDLPPLRWGRG*SLTRSR
Trigger: TCTAGACCTGGTCAGGCTCCATCCCCTCCCCCACCT...AAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp GGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGCCTGGTCCCTCAGCCTaGGAGGCAGGAAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: GILAYSPRQIRRTAAEAGPGPSA*EAGRRD
Trigger: ATCCCTCCTTCCTGCCTCCCAGGCTGAGGGACCAGG...CCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672752.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp CTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 2 (lower is better)
Translates to: LLPGAESTLAPITTGDKVLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...GACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp CTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 2 (lower is better)
Translates to: LCQLTLGPKWQRGPSPRSDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...GCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 2 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp CTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 2 (lower is better)
Translates to: LCQLTLGPKWQRGPSPRSEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...GCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp AGGACGGAGGGCGCCCCAGATCTGTGGAAGTGGACGATCTGCCATTTGCCATCCTGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGGT +
Preference number: 2 (lower is better)
Translates to: RTEGAPDLWKWTICHLPSWCARA*CSGTTG
Trigger: ACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...GGATGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRELPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGCCCATCAGGTGGATGTaGGGATTCAGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQEPIRWM*GFRMVV
Trigger: CACCACCATCCTGAATCCCCACATCCACCTGATGGG...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 2 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR TCA 90 bp TCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGGTAGGCGATGCAGGCTaGCTCGTCGCCCATCAGGTG +
Preference number: 2 (lower is better)
Translates to: SSPHSFSAVGLGGRECHLVGDAG*LVAHQV
Trigger: CACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC...CAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR GCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 2 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GCTGAAGAAGAGCTCAGACCTTGCTCGGTAATTACAGCAGCCCCTGGTGAAGGCGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 2 (lower is better)
Translates to: AEEELRPCSVITAAPGEGGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...GCCTTCACCAGGGGCTGCTGTAATTACCGAGCAAGGTCTGAGCTCTTCTTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR GCA 90 bp TCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 2 (lower is better)
Translates to: SQCFAVVIRRQGERGNEDGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...GTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 2 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 2 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 2 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACACCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GREALLPGAESTLAPITTPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...TGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGCCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: LCQLTLGPKWQRGPSPRSRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...GCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: RECHLPFPGDTGRGEVWERGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: LGEPAAPLHGQSGSLRHSRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...GCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTCCTGGTCCCTCAGCCTaGGAGGCAGGAAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFPGPSA*EAGRRD
Trigger: ATCCCTCCTTCCTGCCTCCCAGGCTGAGGGACCAGG...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672752.1
ENST00000672829.1
3UTR CAA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTaGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGAGATGAC +
Preference number: 2 (lower is better)
Translates to: DRNGREALLPGAEST*APITTGDKVHLRDD
Trigger: GTCATCTCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGACAAGCAGGTTTTCTTaGTGCAGGTACAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRTSRFS*CRYRSD
Trigger: GTCACTTCTGTACCTGCATCAAGAAAACCTGCTTGT...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCATGTGGCCGTTCGCTCTaGAGTTGCGATGACTTTTGT +
Preference number: 2 (lower is better)
Translates to: APLHGQSGSLRHSNAATPCGRSL*SCDDFC
Trigger: ACAAAAGTCATCGCAACTTCAGAGCGAACGGCCACA...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR TCA 90 bp CAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACAGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 2 (lower is better)
Translates to: QCFAVVIRRQGERGNEDTASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...TGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGCCTTCTCCCCGGAGCTaGGTCCACCTTGGCCCCAAT +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVPSPRS*VHLGPN
Trigger: ATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGG...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp GCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 2 (lower is better)
Translates to: AVVIRRQGERGNEDTRSRDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...CCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp TCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGTCAGCTGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 2 (lower is better)
Translates to: SVLASDASTVPKGTPVSAGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...AGCTGACACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTACTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 2 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 2 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: EHFEAGGSWRMLFSPLLQSPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...CTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGSPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 2 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACCAGGATCATCCCTGGTaGCCTGTGGTGGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNQDHPW*PVVAPG
Trigger: ACCTGGTGCCACCACAGGGCACCAGGGATGATCCTG...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp AGGTACAGAAGTGACGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: RYRSDGGGVMTWENSSKILLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...GATTTTGCTGGAATTCTCCCATGTCATCACCCCACCACCGTCACTTCTGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GTGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTAGGTGGTTTTGCCCCTaGGATAATGGGATCACTGGG +
Preference number: 2 (lower is better)
Translates to: VAFTVGAISAWGSDLPPLRWFCP*DNGITG
Trigger: CCCAGTGATCCCATTATCCCAGGGGCAAAACCACCT...AAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR GCA 90 bp CTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 2 (lower is better)
Translates to: LFSPLLQCGWLRGKGVSSDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...AGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp TCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: SSPHSFSAVGLGGRECHLLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...CAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp GGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGAAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 2 (lower is better)
Translates to: GAESTLAPITTGDKVHLRRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...TCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp AGTCCCAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGTGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 2 (lower is better)
Translates to: SPKRNACVSSPWDRNGRECGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR CCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 2 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCCCAGATCTGTGGAAGTaGACGATCTGCCATTTGCCA +
Preference number: 2 (lower is better)
Translates to: LCQLTLGPKWQRGPSPRSPDLWK*TICHLP
Trigger: TGGCAAATGGCAGATCGTCCACTTCCACAGATCTGG...GCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR CAA 90 bp ACTCATCCCCCAAAAGGGTCTCCCTTTGAAGGGAGACAGGAGGCCTaGGGTCAGGATTCGCACCATGGTGGGCACAAACCCAGGAGAACA +
Preference number: 2 (lower is better)
Translates to: THPPKGSPFEGRQEA*GQDSHHGGHKPRRT
Trigger: TGTTCTCCTGGGTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAAAGGGAGACCCTTTTGGGGGATGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR TCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAACAAGCAGGTTTTCTTaGTGCAGGTACAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGTSRFS*CRYRSD
Trigger: GTCACTTCTGTACCTGCATCAAGAAAACCTGCTTGT...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp TCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 2 (lower is better)
Translates to: SQCFAVVIRRQGERGNEDDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...GTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp GTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGGCCCCCAAATTCCCAGTGCTTTaGTGTGGTCATCAGACGCCA +
Preference number: 2 (lower is better)
Translates to: VIRRQGERGNEDTRSRAPKFPVL*CGHQTP
Trigger: TGGCGTCTGATGACCACAGCAAAGCACTGGGAATTT...GGGGGCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTCCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTCCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: LFSPLLQCGWLRGKGVSSRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...AGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp CTCTTCCTACACCCCTTCCAACCTGACCCTTCTCACAATAATCTGAGAAGTCTACTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: LFLHPFQPDPSHNNLRSLLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...TAGACTTCTCAGATTATTGTGAGAAGGGTCAGGTTGGAAGGGGTGTAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp TCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 2 (lower is better)
Translates to: SQCFAVVIRRQGERGNEDCGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...GTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACGTCAGTGCTGGCATCTaGTGCTTCCACAGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNVSAGI*CFHSPK
Trigger: TTTGGGACTGTGGAAGCATCAGATGCCAGCACTGAC...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR GCA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAGGCTATAAAAAGGCATaGGGTCCAAGTAGAAGTGAT +
Preference number: 2 (lower is better)
Translates to: DRNGREALLPGAESTLAPGYKKA*GPSRSD
Trigger: ATCACTTCTACTTGGACCGCATGCCTTTTTATAGCC...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGCCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp AGAAATTCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: RNSQCFAVVIRRQGERGNRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...ATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGAATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp GTGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTCCTTCATCGGCTGGATaGGAACAAAGAACCCTTTTA +
Preference number: 2 (lower is better)
Translates to: VAFTVGAISAWGSDLPPLPSSAG*EQRTLL
Trigger: TAAAAGGGTTCTTTGTTCCCATCCAGCCGATGAAGG...AAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CAA 90 bp GGAACTTGCCCAAGGTCACACAGCAAGTCTGGTCAGAGCTGGGAATaGAAGCCTACTCACCCCAAATCACTGCTCTTTCCCCTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: GTCPRSHSKSGQSWE*KPTHPKSLLFPLQS
Trigger: GGACTGCAGGGGAAAGAGCAGTGATTTGGGGTGAGTAGGCTTCAATTCCCAGCTCTGACCAGACTTGCTGTGTGACCTTGGGCAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR TCA 90 bp CAGTTTGCGAGGGAAGCAAAGAAAAGTCCAGGTATTTCCATCCTGACAGCCTCCAGGGGAGAGAGGCAATaGAGACACACGCTCACGGGC +
Preference number: 2 (lower is better)
Translates to: QFAREAKKSPGISILTASRGERQ*RHTLTG
Trigger: GCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCT...GGAGGCTGTCAGGATGGAAATACCTGGACTTTTCTTTGCTTCCCTCGCAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp TTCCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 2 (lower is better)
Translates to: FLSQCWHLMLPQSQKERLTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...CAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CAGTTTGCGAGGGAAGCAAAGAAAAGTCCAGGTATTTCCATCCTGACAGCCTCCCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: QFAREAKKSPGISILTASLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...GGAGGCTGTCAGGATGGAAATACCTGGACTTTTCTTTGCTTCCCTCGCAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp AGAAATTCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: RNSQCFAVVIRRQGERGNLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...ATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGAATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp GCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGACAGATATGGTGAGATaGAATCCTGGGAAGTTCGGT +
Preference number: 2 (lower is better)
Translates to: AVVIRRQGERGNEDTRSRTDMVR*NPGKFG
Trigger: ACCGAACTTCCCAGGATTTCATCTCACCATATCTGT...CCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp GTTTTGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTCTGCTGAAAAGCAGTTaGCAGGCACCGACGAGGGGA +
Preference number: 2 (lower is better)
Translates to: VLEEHRVCLVRVGSGQIFLLKSS*QAPTRG
Trigger: TCCCCTCGTCGGTGCCTGTCAACTGCTTTTCAGCAG...AAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR GCA 90 bp CAGTTTGCGAGGGAAGCAAAGAAAAGTCCAGGTATTTCCATCCTGACAGCCTCCAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 2 (lower is better)
Translates to: QFAREAKKSPGISILTASRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...GGAGGCTGTCAGGATGGAAATACCTGGACTTTTCTTTGCTTCCCTCGCAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp AGAAGACCCCAGTTTGCGAGGGAAGCAAAGAAAAGTCCAGGTATTTCCATCCTGGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 2 (lower is better)
Translates to: RRPQFAREAKKSPGISILEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...CAGGATGGAAATACCTGGACTTTTCTTTGCTTCCCTCGCAAACTGGGGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp GTTTTGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 2 (lower is better)
Translates to: VLEEHRVCLVRVGSGQIFEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...AAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp AGAGTAGAAATTCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 2 (lower is better)
Translates to: RVEIPSALLWSSDAKGRETPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...CTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGAATTTCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp CAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTGAGATACGACAAAGCTaGAATTCTCCAGGGATGACG +
Preference number: 2 (lower is better)
Translates to: QKERLCQLTLGPKWQRGPEIRQS*NSPGMT
Trigger: CGTCATCCCTGGAGAATTCCAGCTTTGTCGTATCTC...AGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp AGGTACAGAAGTGACGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: RYRSDGGGVMTWENSSKIGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...GATTTTGCTGGAATTCTCCCATGTCATCACCCCACCACCGTCACTTCTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR TCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTACAAGCAGGTTTTCTTaGTGCAGGTACAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLTSRFS*CRYRSD
Trigger: GTCACTTCTGTACCTGCATCAAGAAAACCTGCTTGT...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp GTTTTGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTCAGGTATTTCCATCCTaGCAGCCTCCCTCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: VLEEHRVCLVRVGSGQIFQVFPS*QPPSSS
Trigger: AGAGGAGGAGGGAGGCTGTCAGGATGGAAATACCTG...AAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR TCA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACACAGATATGGTGAGATaGAATCCTGGGAAGTTCGGT +
Preference number: 2 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNTDMVR*NPGKFG
Trigger: ACCGAACTTCCCAGGATTTCATCTCACCATATCTGT...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR TCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGGGCACACAGATATGGTaGGATGAAATCCTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PESVLASDASTVPKGTPVGTQIW*DEILGS
Trigger: ACTTCCCAGGATTTCATCTCACCATATCTGTGTGCC...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp GGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGAATTAGATTCCCTCTCTaGGATACGACAAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: GAESTLAPITTGDKVHLRIRFPL*DTTKLE
Trigger: TTCCAGCTTTGTCGTATCTCAGAGAGGGAATCTAAT...TCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp TCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACAGATATGGTGAGATaGAATCCTGGGAAGTTCGGT +
Preference number: 2 (lower is better)
Translates to: SQCFAVVIRRQGERGNEDTDMVR*NPGKFG
Trigger: ACCGAACTTCCCAGGATTTCATCTCACCATATCTGT...GTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp GTTTTGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTCATCCTCACCAGTTCTaGTCCAACCAACACCCAGGA +
Preference number: 2 (lower is better)
Translates to: VLEEHRVCLVRVGSGQIFHPHQF*SNQHPG
Trigger: TCCTGGGTGTTGGTTGGAGCAGAACTGGTGAGGATG...AAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp ATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGTCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: IHLRNTQKFGYKKACGPSLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...ACTTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GAAATCCTGGGAAGTTCGGTAGAGAAGACCCCAGTTTGCGAGGGAAGCAAAGAATGTGTCAGCTCACCTTaGGACCGAAATGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: EILGSSVEKTPVCEGSKECVSSP*DRNGRE
Trigger: CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACA...TTCTTTGCTTCCCTCGCAAACTGGGGTCTTCTCTACCGAACTTCCCAGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR TCA 90 bp GCGAAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 2 (lower is better)
Translates to: AKSIYEIHRNLAIKRHAVASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...GACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp AGTCCCAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGGCTATAAAAAGGCATaGGGTCCAAGTAGAAGTGAT +
Preference number: 2 (lower is better)
Translates to: SPKRNACVSSPWDRNGREGYKKA*GPSRSD
Trigger: ATCACTTCTACTTGGACCGCATGCCTTTTTATAGCC...CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp AAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAACCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 2 (lower is better)
Translates to: KSIYEIHRNLAIKRHAVQPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...TTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR-3UTR CCA 90 bp CTCTTCCTACACCCCTTCCAACCTGACCCTTCTCACAATAATCTGAGAAGTCTAACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 2 (lower is better)
Translates to: LFLHPFQPDPSHNNLRSLTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...TAGACTTCTCAGATTATTGTGAGAAGGGTCAGGTTGGAAGGGGTGTAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp ATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGTGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: IHLRNTQKFGYKKACGPSVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...ACTTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp CAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACAATTAGATTCCCTCTCTaGGATACGACAAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: QCFAVVIRRQGERGNEDTIRFPL*DTTKLE
Trigger: TTCCAGCTTTGTCGTATCTCAGAGAGGGAATCTAAT...TGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR GCA 90 bp GTTTTGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTAAATTCCCAGTGCTTTaGTGTGGTCATCAGACGCCA +
Preference number: 2 (lower is better)
Translates to: VLEEHRVCLVRVGSGQIFKFPVL*CGHQTP
Trigger: TGGCGTCTGATGACCACAGCAAAGCACTGGGAATTT...AAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp GTTTTGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAGATTTTTGAGATACGACAAAGCTaGAATTCTCCAGGGATGACG +
Preference number: 2 (lower is better)
Translates to: VLEEHRVCLVRVGSGQIFEIRQS*NSPGMT
Trigger: CGTCATCCCTGGAGAATTCCAGCTTTGTCGTATCTC...AAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CCA 90 bp GCGAAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: AKSIYEIHRNLAIKRHAVRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...GACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp ATAAAAAGGCATGCGGTCCAAGTAGAAGTGATACCTAAACGTTGCTTTCTTTTGGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: IKRHAVQVEVIPKRCFLLEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...CAAAAGAAAGCAACGTTTAGGTATCACTTCTACTTGGACCGCATGCCTTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp TTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGTAGAAGTGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 2 (lower is better)
Translates to: LRNTQKFGYKKACGPSRSGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...ACTTCTACTTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp TCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGTAGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 2 (lower is better)
Translates to: SIYEIHRNLAIKRHAVQVGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...TACTTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR GCA 90 bp CAGAGAGGCAGCAACATAATTCCGAGTCGGACACTGAGAATACAACCTCTATTTCTGTTCCTGAGTCAGTaGTGGCATCTGATGCTTCCA +
Preference number: 2 (lower is better)
Translates to: QRGSNIIPSRTLRIQPLFLFLSQ*WHLMLP
Trigger: TGGAAGCATCAGATGCCAGCACTGACTCAGGAACAG...AAATAGAGGTTGTATTCTCAGTGTCCGACTCGGAATTATGTTGCTGCCTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR GCA 90 bp CAGTTTGCGAGGGAAGCAAAGAAAAGTCCAGGTATTTCCATCCTGACAGCCTCCAGTAGAAATTCCCAGTaGTTTGCTGTGGTCATCAGA +
Preference number: 2 (lower is better)
Translates to: QFAREAKKSPGISILTASSRNSQ*FAVVIR
Trigger: TCTGATGACCACAGCAAAGCACTGGGAATTTCTACT...GGAGGCTGTCAGGATGGAAATACCTGGACTTTTCTTTGCTTCCCTCGCAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CCA 90 bp TTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGTAGAAGTAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: LRNTQKFGYKKACGPSRSRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...ACTTCTACTTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GAAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: EIHLRNTQKFGYKKACGPRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...TGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GAAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCACTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: EIHLRNTQKFGYKKACGPLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...TGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp ATAAAAAGGCATGCGGTCCAAGTAGAAGTGATACCTAAACGTTGCTTTCTTTTGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: IKRHAVQVEVIPKRCFLLLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CAAAAGAAAGCAACGTTTAGGTATCACTTCTACTTGGACCGCATGCCTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp ATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAAGTCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: IHLRNTQKFGYKKACGPSLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...ACTTGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CCA 90 bp GCGAAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCGAGATACGACAAAGCTaGAATTCTCCAGGGATGACG +
Preference number: 2 (lower is better)
Translates to: AKSIYEIHRNLAIKRHAVEIRQS*NSPGMT
Trigger: CGTCATCCCTGGAGAATTCCAGCTTTGTCGTATCTC...GACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR TCA 90 bp GAAATCCATTTACGAAATACACAGAAATTTGGCTATAAAAAGGCATGCGGTCCAACAAGCAGGTTTTCTTaGTGCAGGTACAGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: EIHLRNTQKFGYKKACGPTSRFS*CRYRSD
Trigger: GTCACTTCTGTACCTGCATCAAGAAAACCTGCTTGT...TGGACCGCATGCCTTTTTATAGCCAAATTTCTGTGTATTTCGTAAATGGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR CAA 90 bp TTATTTATTATTATTATTATTATTATTTTGCATCTAAAGGATGTTTaGGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LFIIIIIIILHLKDV*EEHRVCLVRVGSGQ
Trigger: CTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCCAAAACATCCTTTAGATGCAAAATAATAATAATAATAATAATAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR GCA 72 bp GATCATCCCTGGTGCCCTGTGGTGGCACCAGGTGGCTaGCCACCCACAGGCGTGGCCTTCACAGTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: DHPWCPVVAPGG*PPTGVAFTVGA
Trigger: GGCCCCCACTGTGAAGGCCACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACAGGGCACCAGGGATGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 72 bp GCCTGCCACATCAGGATCATCCCTGGTGCCCTGTGGTaGCACCAGGTGGCTGCCCACCCACAGGCGTGGCCT +
Preference number: 3 (lower is better)
Translates to: ACHIRIIPGALW*HQVAAHPQAWP
Trigger: AGGCCACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACAGGGCACCAGGGATGATCCTGATGTGGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 72 bp CCTGCCTGCCACATCAGGATCATCCCTGGTGCCCTGTaGTGGCACCAGGTGGCTGCCCACCCACAGGCGTGG +
Preference number: 3 (lower is better)
Translates to: PACHIRIIPGAL*WHQVAAHPQAW
Trigger: CCACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACAGGGCACCAGGGATGATCCTGATGTGGCAGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 72 bp CCTCAGTGGGGCAGGACGGAGGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCATTTGCCATCCCGGCGG +
Preference number: 3 (lower is better)
Translates to: PQWGRTEGAPDL*KWTICHLPSRR
Trigger: CCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCACTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672089.1
3UTR CCA 72 bp CCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAACGCAGCGACCCCAGC +
Preference number: 3 (lower is better)
Translates to: PGRTSSSTPRTE*ISAAQQRSDPS
Trigger: GCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR-3UTR CAA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAGGAGCTGAGTCCACCTaGGCCCCAATAACCACAGGT +
Preference number: 3 (lower is better)
Translates to: DRNGREALLPGAESTLAPGAEST*APITTG
Trigger: ACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR CCA 72 bp ACAGGCGTGGCCTTCACAGTGGGGGCCATCTCAGCCTaGGGTAGCGATCTGCCTCCACTTCTCTGGCACTTG +
Preference number: 3 (lower is better)
Translates to: TGVAFTVGAISA*GSDLPPLLWHL
Trigger: CAAGTGCCAGAGAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCACGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR GCA 72 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCC +
Preference number: 3 (lower is better)
Translates to: GSWRMLFSPLLQ*GWLRGKGVSSA
Trigger: GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR GCA 72 bp TCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTaGCTCCACTTCTCTGGCACTTGGAGAGTGACACAG +
Preference number: 3 (lower is better)
Translates to: SQWGPSQPGVAI*LHFSGTWRVTQ
Trigger: CTGTGTCACTCTCCAAGTGCCAGAGAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 72 bp CACAGTCCCAAAAGGAACGCCTGTGTCAGCTCACCTTaGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGA +
Preference number: 3 (lower is better)
Translates to: HSPKRNACVSSP*DRNGREALLPG
Trigger: TCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTGGGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR-3UTR CAA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGGTGGGCAGGTTAATGTaGGAGGTGGACTTCACCAGA +
Preference number: 3 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWVGRLM*EVDFTR
Trigger: TCTGGTGAAGTCCACCTCCAACATTAACCTGCCCAC...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR TCA 72 bp GTCAGCACAGGAGGAAGAAGACTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: VSTGGRRLRGAL*GRRLLAYALLP
Trigger: GGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAGTCTTCTTCCTCCTGTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000348628.10
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
3UTR GCA 72 bp GGTAGGCTCTGGGCAGATTTTTCTGTGAGTCTCCCCTaGCTGCCACATCAGGATCATCCCTGGTGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: GRLWADFSVSLP*LPHQDHPWCPV
Trigger: CACAGGGCACCAGGGATGATCCTGATGTGGCAGGCAGGGGAGACTCACAGAAAAATCTGCCCAGAGCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CAA 90 bp TCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACGGAGCTGAGTCCACCTaGGCCCCAATAACCACAGGT +
Preference number: 3 (lower is better)
Translates to: SQCFAVVIRRQGERGNEDGAEST*APITTG
Trigger: ACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC...GTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR CCA 72 bp GGAGGAGCACAGAGTTTGTCTGGTGAGGGTAGGCTCTaGGCAGATTTTTCTGTGAGTCTCCCCTGCCTGCCA +
Preference number: 3 (lower is better)
Translates to: GGAQSLSGEGRL*ADFSVSLPCLP
Trigger: TGGCAGGCAGGGGAGACTCACAGAAAAATCTGCCCAGAGCCTACCCTCACCAGACAAACTCTGTGCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 72 bp CAAAAGGGTCTCCCTTTGAAGGGAGACAGGAGGCCTTaGGTCAGGATTCGCACCATGGTGGGCACAAACCCA +
Preference number: 3 (lower is better)
Translates to: QKGLPLKGDRRP*VRIRTMVGTNP
Trigger: TGGGTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAAAGGGAGACCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CAA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACGGTCAGAGCTGGGAATaGAAGCCTACTCACCCCAAA +
Preference number: 3 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNGQSWE*KPTHPK
Trigger: TTTGGGGTGAGTAGGCTTCAATTCCCAGCTCTGACC...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CAA 90 bp GAAATCCTGGGAAGTTCGGTAGAGAAGACCCCAGTTTGCGAGGGAAGCAAAGAACCTCTCTGCCCTGACTaGCTGTTCCTGAGTCAGTGC +
Preference number: 3 (lower is better)
Translates to: EILGSSVEKTPVCEGSKEPLCPD*LFLSQC
Trigger: GCACTGACTCAGGAACAGCAAGTCAGGGCAGAGAGG...TTCTTTGCTTCCCTCGCAAACTGGGGTCTTCTCTACCGAACTTCCCAGGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR TCA 72 bp CAAGGTCACACAGCAAGTCTGGTCAGAGCTGGGAATTaGAGCCTACTCACCCCAAATCACTGCTCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: QGHTASLVRAGN*SLLTPNHCSFP
Trigger: GGGGAAAGAGCAGTGATTTGGGGTGAGTAGGCTTCAATTCCCAGCTCTGACCAGACTTGCTGTGTGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR TCA 72 bp AGAGAGAATGCGAACCCGAGGCTGCAGGATGAGGCATaGAGAGTAGAAATTCCCAGTGCTTTGCTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: RENANPRLQDEA*RVEIPSALLWS
Trigger: TGACCACAGCAAAGCACTGGGAATTTCTACTCTTCATGCCTCATCCTGCAGCCTCGGGTTCGCATTCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR TCA 72 bp CTGACCAGGTCTAGAAGTAAACAGGAGTCCAGCCAGTaGCTATCCCTGCCAGTTCCTGCAGGTAAATTAGGC +
Preference number: 3 (lower is better)
Translates to: LTRSRSKQESSQ*LSLPVPAGKLG
Trigger: GCCTAATTTACCTGCAGGAACTGGCAGGGATAGTCACTGGCTGGACTCCTGTTTACTTCTAGACCTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR CCA 72 bp GGACTTGAGAAAAGAACCCAGCAGACAGCTGGTGATTaGGGAGAGCTCAGAAAATCTCGGATCAAACATCCT +
Preference number: 3 (lower is better)
Translates to: GLEKRTQQTAGD*GELRKSRIKHP
Trigger: AGGATGTTTGATCCGAGATTTTCTGAGCTCTCCCCAATCACCAGCTGTCTGCTGGGTTCTTTTCTCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR-3UTR CAA 90 bp CAGAGAGGCAGCAACATAATTCCGAGTCGGACACTGAGAATACAACCTCTATTTGTGGGCAGGTTAATGTaGGAGGTGGACTTCACCAGA +
Preference number: 3 (lower is better)
Translates to: QRGSNIIPSRTLRIQPLFVGRLM*EVDFTR
Trigger: TCTGGTGAAGTCCACCTCCAACATTAACCTGCCCAC...AAATAGAGGTTGTATTCTCAGTGTCCGACTCGGAATTATGTTGCTGCCTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
3UTR TCA 72 bp AAAAGAAAGAGAGAATGCGAACCCGAGGCTGCAGGATaGGGCATGAAGAGTAGAAATTCCCAGTGCTTTGCT +
Preference number: 3 (lower is better)
Translates to: KRKRECEPEAAG*GMKSRNSQCFA
Trigger: AGCAAAGCACTGGGAATTTCTACTCTTCATGCCTCATCCTGCAGCCTCGGGTTCGCATTCTCTCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
3UTR CCA 72 bp TCACATAGCCAGACGTTTGCTCCTTCATCGGCTGGATaGGAACAAAGAACCCTTTTAACCAATGAGGGAACT +
Preference number: 3 (lower is better)
Translates to: SHSQTFAPSSAG*EQRTLLTNEGT
Trigger: AGTTCCCTCATTGGTTAAAAGGGTTCTTTGTTCCCATCCAGCCGATGAAGGAGCAAACGTCTGGCTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGCGGGTCTCCTCCGACTaGGCGGTGCGTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRRVSSD*AVRGMP
Trigger: CGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCG...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGAGCCTGGTCCCTCAGTaGGGCAGGACGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRSLVPQ*GRTEGA
Trigger: GGCGCCCTCCGTCCTGCCCCACTGAGGGACCAGGCT...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672785.1
CDS-3UTR CCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATCCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSRLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCGGGTCTCCTCCGACTaGGCGGTGCGTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSRVSSD*AVRGMP
Trigger: CGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCCCTTGGCTTCCGGGGTaGCAGTGTCCCATTCCGGCG +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPPWLPG*QCPIPA
Trigger: CGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGG...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDRLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQRLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGGTAGGCGATGCAGGCTaGCTCGTCGCCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRVGDAG*LVAHQV
Trigger: CACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAAPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGGTGGCACCAGGTGGCTaGCCACCCACAGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWEVAPGG*PPTGVA
Trigger: GGCCACGCCTGTGGGTGGGCAGCCACCTGGTGCCAC...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCTGCACCACCCCCATCTaGTGGCAGTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPCTTPI*WQCSTA
Trigger: GGCTGTGCTGCACTGCCACCAGATGGGGGTGGTGCA...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGCGGGTCTCCTCCGACTaGGCGGTGCGTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWERVSSD*AVRGMP
Trigger: CGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCG...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCGGGTCTCCTCCGACTaGGCGGTGCGTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: PVSAHLGTEMAERPFSPERVSSD*AVRGMP
Trigger: CGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCG...CTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGCGGGTCTCCTCCGACTaGGCGGTGCGTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGERVSSD*AVRGMP
Trigger: CGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCG...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGGCCCCCAGCCTGGTCCCTCAGTaGGGCAGGACGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VIRRQGERGNEDTRSRAPSLVPQ*GRTEGA
Trigger: GGCGCCCTCCGTCCTGCCCCACTGAGGGACCAGGCT...GGGGGCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
CDS-3UTR CCA 90 bp ACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGACTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSPTPREGSDHPEVSTGGLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...TCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGAGGCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LAYSPRQIRRTAAEAGERLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...CCTCTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCGAAGCCCTCTGGGCCTaGGGCAGGCCAAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATEALWA*GRPRAC
Trigger: GCAGGCTCTTGGCCTGCCCCAGGCCCAGAGGGCTTC...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGTGGACCCAGCACCCCTaGGGTGATGGACCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRWTQHP*GDGPKE
Trigger: CTCCTTGGGTCCATCACCCCAGGGGTGCTGGGTCCA...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR TCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTGGGGGACCAGGACTaGGGCGCTGCTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWLGDQD*GAAALL
Trigger: GAGCAGAGCAGCAGCGCCTCAGTCCTGGTCCCCCAG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGCCTTGGCTTCCGGGGTaGCAGTGTCCCATTCCGGCG +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQEPWLPG*QCPIPA
Trigger: CGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGG...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCCTTCTCCCCGGAGCTaGGTCCACCTTGGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSPSPRS*VHLGPN
Trigger: ATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGCCACTTGCCTGCCCGTaGTGCCGAGTGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQPLACP*CRVQTE
Trigger: CTCTGTTTGCACTCGGCAGCACGGGCAGGCAAGTGG...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPSVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCTGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPCGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQEGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGGGGCAGCAAGGTCTCTaGCAAGGACAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRGQQGL*QGQRPV
Trigger: CACTGGCCTCTGTCCTTGGCAGAGACCTTGCTGCCC...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGAACCTAGGGACCACTTaGCTGCCCGTGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRNLGTT*LPVLPS
Trigger: GGAAGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGTGGTACAGGCGGTGCTaGTCCTCATCCCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRWYRRC*SSSQNG
Trigger: CCCGTTCTGGGATGAGGACCAGCACCGCCTGTACCA...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGCCGGCTTTGATCTGCTaGTACAGGCGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRPALIC*YRRCWS
Trigger: GGACCAGCACCGCCTGTACCAGCAGATCAAAGCCGG...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCCCGGCTTTGATCTGCTaGTACAGGCGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPPALIC*YRRCWS
Trigger: GGACCAGCACCGCCTGTACCAGCAGATCAAAGCCGG...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATTGCAGGATGCCACGGTaGAGCGGTGCGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDCRMPR*SGARSR
Trigger: CCTGGATCTCGCACCGCTCCACCGTGGCATCCTGCA...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRERLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRELLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAAGAAGCCCTCTGGGCCTaGGGCAGGCCAAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TEMAERPFSPELSPPWPQEALWA*GRPRAC
Trigger: GCAGGCTCTTGGCCTGCCCCAGGCCCAGAGGGCTTC...TTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCCTGGGGGACCAGGACTaGGGCGCTGCTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRLGDQD*GAAALL
Trigger: GAGCAGAGCAGCAGCGCCTCAGTCCTGGTCCCCCAG...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRSRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPSRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGTCACTGCGGCACCCTTaGGCTTGGAGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKSLRHP*AWRPAT
Trigger: TGTTGCTGGCCTCCAAGCTCAAGGGTGCCGCAGTGA...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGTCACTGCGGCACCCTTaGGCTTGGAGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQSLRHP*AWRPAT
Trigger: TGTTGCTGGCCTCCAAGCTCAAGGGTGCCGCAGTGA...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGTAGGCGATGCAGGCTaGCTCGTCGCCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGVGDAG*LVAHQV
Trigger: CACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGGACTGAGGCGCTGCTaGTCTGCTCCCGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGGLRRC*SAPEPR
Trigger: CCTAGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCGGACTGAGGCGCTGCTaGTCTGCTCCCGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATGLRRC*SAPEPR
Trigger: CCTAGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCC...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGCCAGGACTGAGGCGCTaGTGCTCTGCTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQEPGLRR*CSAPEP
Trigger: AGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCCTGG...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGATCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGSAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCGTCTGCCAGCTTCACTaGGGCACCCTTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPVCQLH*GTLELG
Trigger: TCCAAGCTCAAGGGTGCCGCAGTGAAGCTGGCAGAC...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAGCGCCGGCTTTGATCTaGTGGTACAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DRNGREALLPGAESTLAPAPALI*WYRRCW
Trigger: CCAGCACCGCCTGTACCAGCAGATCAAAGCCGGCGC...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCGCCGGCTTTGATCTaGTGGTACAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPAPALI*WYRRCW
Trigger: CCAGCACCGCCTGTACCAGCAGATCAAAGCCGGCGC...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCGCCACGGTGGAGCGGTaGGAGATCCAGGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATATVER*EIQGCL
Trigger: TAAGCACCCCTGGATCTCGCACCGCTCCACCGTGGC...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCCACGGTGGAGCGGTaGGAGATCCAGGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQATVER*EIQGCL
Trigger: TAAGCACCCCTGGATCTCGCACCGCTCCACCGTGGC...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCACGGTCTCCTGTCTGTaGATGCAGGATGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPTVSCL*MQDATV
Trigger: CACCGTGGCATCCTGCATGCACAGACAGGAGACCGT...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGCCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSAPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGCCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGCTGCAGACCTGGCGTTaGCTGTCTCACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQLQTWR*LSHLGL
Trigger: CAGGCCCAGGTGAGACAGGCAACGCCAGGTCTGCAG...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCGGCAGGCCAAGAGCCTaGCCCTGGGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSAGRPRA*PWAWAA
Trigger: TGCTGCCCAGGCCCAGGGGCAGGCTCTTGGCCTGCC...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGTGGCACCAGGTGGCTaGCCACCCACAGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCVAPGG*PPTGVA
Trigger: GGCCACGCCTGTGGGTGGGCAGCCACCTGGTGCCAC...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGTGAGGCTTGGGACTaGGGGACCAGGACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGEGEAWD*GTRTEA
Trigger: CGCCTCAGTCCTGGTCCCCCAGTCCCAAGCCTCACC...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGGGTGAGGCTTGGGACTaGGGGACCAGGACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWGEAWD*GTRTEA
Trigger: CGCCTCAGTCCTGGTCCCCCAGTCCCAAGCCTCACC...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCAGGCAGGTGAGGCTTaGGACTGGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATQAGEA*DWGTRT
Trigger: AGTCCTGGTCCCCCAGTCCCAAGCCTCACCTGCCTG...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACTGCACCACCCCCATCTaGTGGCAGTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDCTTPI*WQCSTA
Trigger: GGCTGTGCTGCACTGCCACCAGATGGGGGTGGTGCA...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCCGGCTTTGATCTGCTaGTACAGGCGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSPALIC*YRRCWS
Trigger: GGACCAGCACCGCCTGTACCAGCAGATCAAAGCCGG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGGTCCCATTCCGGCGATaGGAAATCATAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKVPFRR*EIIGAG
Trigger: GCCGGCGCCTATGATTTCCCATCGCCGGAATGGGAC...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCATGCAGGATGCCACGGTaGAGCGGTGCGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPCRMPR*SGARSR
Trigger: CCTGGATCTCGCACCGCTCCACCGTGGCATCCTGCA...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGTGCAGGATGCCACGGTaGAGCGGTGCGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQECRMPR*SGARSR
Trigger: CCTGGATCTCGCACCGCTCCACCGTGGCATCCTGCA...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQCGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVVIRRQGERGNEDTRSRRLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...CCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTACTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGGTTGCCTGTCTCACCTaGGCCTGGGCAGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKVACLT*AWAAGL
Trigger: AAGTCCTGCTGCCCAGGCCCAGGTGAGACAGGCAAC...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGGGAAACCAGGAGGCCTaGGCAGCATCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRGNQEA*AASLLA
Trigger: GGCCAGGAGAGATGCTGCCCAGGCCTCCTGGTTTCC...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGACTGGGGGACCAGGACTaGGGCGCTGCTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGLGDQD*GAAALL
Trigger: GAGCAGAGCAGCAGCGCCTCAGTCCTGGTCCCCCAG...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GATGACGGGGGTGGGGTGGGCAGGTTAATGTTGGAGGTGGACTTCACCAGAAGGCTGGGGGACCAGGACTaGGGCGCTGCTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: DDGGGVGRLMLEVDFTRRLGDQD*GAAALL
Trigger: GAGCAGAGCAGCAGCGCCTCAGTCCTGGTCCCCCAG...CCTTCTGGTGAAGTCCACCTCCAACATTAACCTGCCCACCCCACCCCCGTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTGGGGGACCAGGACTaGGGCGCTGCTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSALGDQD*GAAALL
Trigger: GAGCAGAGCAGCAGCGCCTCAGTCCTGGTCCCCCAG...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQSRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGATCACTGCGGCACCCTTaGGCTTGGAGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGSLRHP*AWRPAT
Trigger: TGTTGCTGGCCTCCAAGCTCAAGGGTGCCGCAGTGA...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCCCTTGGCTTCCGGGGTaGCAGTGTCCCATTCCGGCG +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRPWLPG*QCPIPA
Trigger: CGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGG...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp ACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAAGTAGGCGATGCAGGCTaGCTCGTCGCCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: TEMAERPFSPELSPPWPQVGDAG*LVAHQV
Trigger: CACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC...TTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp ACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGACTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TSPTPREGSDHPEVSTGGLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...TCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTACCAGCACCCCTGGGGTaGTGGACCCAAGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLPAPLG*WTQGGP
Trigger: AGGCCCTCCTTGGGTCCATCACCCCAGGGGTGCTGG...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCTTGCCTGCCCGTGCTaGCGAGTGCAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSLACPC*RVQTEN
Trigger: GTTCTCTGTTTGCACTCGGCAGCACGGGCAGGCAAG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAGGACTGAGGCGCTGCTaGTCTGCTCCCGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGGLRRC*SAPEPR
Trigger: CCTAGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCC...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACATCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GREALLPGAESTLAPITTSAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...TGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGTCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGSAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGCGGACGATGTTGGGGTaGTTCAGCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRRTMLG*FSRRQM
Trigger: CATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCG...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGTCTGCCAGCTTCACTaGGGCACCCTTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQVCQLH*GTLELG
Trigger: TCCAAGCTCAAGGGTGCCGCAGTGAAGCTGGCAGAC...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCTGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSCKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAGCGCCGGCTTTGATCTaGTGGTACAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGAPALI*WYRRCW
Trigger: CCAGCACCGCCTGTACCAGCAGATCAAAGCCGGCGC...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGGCCACGGTGGAGCGGTaGGAGATCCAGGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWEATVER*EIQGCL
Trigger: TAAGCACCCCTGGATCTCGCACCGCTCCACCGTGGC...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGCCACGGTGGAGCGGTaGGAGATCCAGGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLATVER*EIQGCL
Trigger: TAAGCACCCCTGGATCTCGCACCGCTCCACCGTGGC...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCTGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATWCARA*CSGTTG
Trigger: ACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCATGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPCGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGACCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GAESTLAPITTGDKVHLRPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...TCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: ERLCQLTLGPKWQRGPSPGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...GGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCAGGCAGGTGAGGCTTaGGACTGGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWQAGEA*DWGTRT
Trigger: AGTCCTGGTCCCCCAGTCCCAAGCCTCACCTGCCTG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGCAGGCAGGTGAGGCTTaGGACTGGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGEQAGEA*DWGTRT
Trigger: AGTCCTGGTCCCCCAGTCCCAAGCCTCACCTGCCTG...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGCAGGCAGGTGAGGCTTaGGACTGGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLQAGEA*DWGTRT
Trigger: AGTCCTGGTCCCCCAGTCCCAAGCCTCACCTGCCTG...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGGTAGTCGGACGATGTTaGGGTGCTTCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRVVGRC*GASAGG
Trigger: GCCGCCTGCTGAAGCACCCCAACATCGTCCGACTAC...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGTAGTCGGACGATGTTaGGGTGCTTCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPVVGRC*GASAGG
Trigger: GCCGCCTGCTGAAGCACCCCAACATCGTCCGACTAC...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGTGCACCACCCCCATCTaGTGGCAGTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERCTTPI*WQCSTA
Trigger: GGCTGTGCTGCACTGCCACCAGATGGGGGTGGTGCA...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGTGCACCACCCCCATCTaGTGGCAGTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLCTTPI*WQCSTA
Trigger: GGCTGTGCTGCACTGCCACCAGATGGGGGTGGTGCA...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACCCCCCTCCACCTCTATaGCCAGGCCAAAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDPPPPL*PGQSLP
Trigger: TGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGG...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTGCCCCCTCCACCTCTATaGCCAGGCCAAAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TPRTEWISAAQQRSDPSLPPPPL*PGQSLP
Trigger: TGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGG...CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGTCCCATTCCGGCGATaGGAAATCATAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQVPFRR*EIIGAG
Trigger: GCCGGCGCCTATGATTTCCCATCGCCGGAATGGGAC...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTCGACTGGGCGGTGCGTaGGATGCCGCCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFRLGGA*DAASVQ
Trigger: CTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCG...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGCCTGGTCCCTCAGTaGGGCAGGACGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLSLVPQ*GRTEGA
Trigger: GGCGCCCTCCGTCCTGCCCCACTGAGGGACCAGGCT...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672785.1
CDS-3UTR CCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGACTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GAESTLAPITTGDKVHLRLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...TCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCACTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGCCAAGAGCCTGCCCCTaGGCCTGGGCAGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREPRACP*AWAARS
Trigger: AGACCTTGCTGCCCAGGCCCAGGGGCAGGCTCTTGG...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGAGGTACTGGGAAGCCCTCTaGGCCTGGGGCAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LAYSPRQIRRTAAEAGERYWEAL*AWGRPR
Trigger: TCTTGGCCTGCCCCAGGCCCAGAGGGCTTCCCAGTA...CCTCTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCGGGGCCATCTCAGCCTaGGGTAGCGATCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGEPAAPLHGQSGSLRHSGAISA*GSDLPP
Trigger: TGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCC...GCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGCCAGCACGGGGAGTCTaGCAAACTCATCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQPARGV*QTHPPK
Trigger: TTTTGGGGGATGAGTTTGCCAGACTCCCCGTGCTGG...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGCCTGGTCCCTCAGCCTaGGAGGCAGGAAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGPGPSA*EAGRRD
Trigger: ATCCCTCCTTCCTGCCTCCCAGGCTGAGGGACCAGG...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672752.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATGACCCAAGGAGGGCCTaGAGGAGGTGGAATAGAGCA +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDDPRRA*RRWNRA
Trigger: TGCTCTATTCCACCTCCTCCAGGCCCTCCTTGGGTC...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR TCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDSRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQESRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CTCAGTGGGGCAGGACGGAGGGCGCCCCAGATCTGTGGAAGTGGACGATCTGCCATCTGCTGGATACAGTaGCTGGCATCCGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSGAGRRAPQICGSGRSAICWIQ*LASASL
Trigger: CAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGAT...GGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672089.1
CDS-3UTR TCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGATCTGCTGGATACAGTaGCTGGCATCCGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQICWIQ*LASASL
Trigger: CAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGAT...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCATCTGCTGGATACAGTaGCTGGCATCCGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSICWIQ*LASASL
Trigger: CAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGAT...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGCATAGGCGCCGGCTTTaGTCTGCTGGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGHRRRL*SAGTGG
Trigger: ACCGCCTGTACCAGCAGATCAAAGCCGGCGCCTATG...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATTGGCCAGCATCGTGGTaGGAATGGCTCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDWPASW*EWLPSV
Trigger: AACTGAAGGGAGCCATTCTCACCACGATGCTGGCCA...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSAASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGCCCAATAACCACAGGTaGCAAGGTCCACCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRPNNHR*QGPPQR
Trigger: TCTCTGAGGTGGACCTTGTCACCTGTGGTTATTGGG...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGCCTTCTCCCCGGAGCTaGGTCCACCTTGGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRPSPRS*VHLGPN
Trigger: ATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGG...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATCAGGTATTTCCATCCTaGCAGCCTCCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDQVFPS*QPPSSS
Trigger: AGAGGAGGAGGGAGGCTGTCAGGATGGAAATACCTG...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGCTGGCACTTGGAGAGTaGCACAGTGGACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQLALGE*HSGQEV
Trigger: CACCTCCTGTCCACTGTGTCACTCTCCAAGTGCCAG...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGGGCAGATTTTTCTGTaGGTCTCCCCTGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGGQIFL*VSPACH
Trigger: GTGGCAGGCAGGGGAGACTCACAGAAAAATCTGCCC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACGCCCGTGCTGCCGAGTaGAAACAGAGAACCGGTTTG +
Preference number: 4 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADARAAE*KQRTGL
Trigger: CAAACCGGTTCTCTGTTTGCACTCGGCAGCACGGGC...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTGGCCCGTGCTGCCGAGTaGAAACAGAGAACCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TPRTEWISAAQQRSDPSLARAAE*KQRTGL
Trigger: CAAACCGGTTCTCTGTTTGCACTCGGCAGCACGGGC...CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCCACTTGCCTGCCCGTaGTGCCGAGTGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWPLACP*CRVQTE
Trigger: CTCTGTTTGCACTCGGCAGCACGGGCAGGCAAGTGG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGENLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGNLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERNLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGGACTGAGGCGCTGCTaGTCTGCTCCCGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREGLRRC*SAPEPR
Trigger: CCTAGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCC...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCCCAGGACTGAGGCGCTaGTGCTCTGCTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPPGLRR*CSAPEP
Trigger: AGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCCTGG...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCCAGGACTGAGGCGCTaGTGCTCTGCTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATPGLRR*CSAPEP
Trigger: AGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCCTGG...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGCCGAGAAGGCTCCCTTaGCCAATTCCTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKPRRLP*PIPRRA
Trigger: AGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTCGG...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCTCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPSAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAACGGACGATGTTGGGGTaGTTCAGCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TEMAERPFSPELSPPWPQRTMLG*FSRRQM
Trigger: CATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCG...TTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGTGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQECKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGGACGGAGGGCGCCCCAGATCTGTGGAAGTGGACGATCTGCCATTTGCCATCCGCGCCGGCTTTGATCTaGTGGTACAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTEGAPDLWKWTICHLPSAPALI*WYRRCW
Trigger: CCAGCACCGCCTGTACCAGCAGATCAAAGCCGGCGC...GGATGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672089.1
CDS-3UTR GCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCGCGCCGGCTTTGATCTaGTGGTACAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFAPALI*WYRRCW
Trigger: CCAGCACCGCCTGTACCAGCAGATCAAAGCCGGCGC...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: PVSAHLGTEMAERPFSPESVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...CTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp CTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGAGGTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: LAYSPRQIRRTAAEAGERSVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...CCTCTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACACGGTCTCCTGTCTGTaGATGCAGGATGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDTVSCL*MQDATV
Trigger: CACCGTGGCATCCTGCATGCACAGACAGGAGACCGT...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACACGGTCTCCTGTCTGTaGATGCAGGATGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADTVSCL*MQDATV
Trigger: CACCGTGGCATCCTGCATGCACAGACAGGAGACCGT...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGTGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWWCARA*CSGTTG
Trigger: ACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCTGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LGEPAAPLHGQSGSLRHSCGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...GCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCATGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAACGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGTCCCAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGCCTCCGACTGGGCGGTaGGTGGGATGCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SPKRNACVSSPWDRNGREPPTGR*VGCRQR
Trigger: ACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGG...CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCATGGAAGTGGACGATCTaGCATTTGCCATCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: APLHGQSGSLRHSNAATPWKWTI*HLPSRR
Trigger: CCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCA...TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGEGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGEGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACAGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: GREALLPGAESTLAPITTEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...TGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGGCCCCCGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: VIRRQGERGNEDTRSRAPEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...GGGGGCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGTGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGWCARA*CSGTTV
Trigger: CACTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510347.2
ENST00000672396.1
CDS-3UTR CCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGTGAGGCTTGGGACTaGGGGACCAGGACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKGEAWD*GTRTEA
Trigger: CGCCTCAGTCCTGGTCCCCCAGTCCCAAGCCTCACC...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GATGACGGGGGTGGGGTGGGCAGGTTAATGTTGGAGGTGGACTTCACCAGAAGGGGTGAGGCTTGGGACTaGGGGACCAGGACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: DDGGGVGRLMLEVDFTRRGEAWD*GTRTEA
Trigger: CGCCTCAGTCCTGGTCCCCCAGTCCCAAGCCTCACC...CCTTCTGGTGAAGTCCACCTCCAACATTAACCTGCCCACCCCACCCCCGTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGTGCACCACCCCCATCTaGTGGCAGTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GILAYSPRQIRRTAAEAGCTTPI*WQCSTA
Trigger: GGCTGTGCTGCACTGCCACCAGATGGGGGTGGTGCA...CCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTCCCCCCTCCACCTCTATaGCCAGGCCAAAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WPSQWGPSQPGVAICLHFPPPPL*PGQSLP
Trigger: TGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGG...GAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGCCCCCTCCACCTCTATaGCCAGGCCAAAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLPPPPL*PGQSLP
Trigger: TGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGG...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGTCCCATTCCGGCGATaGGAAATCATAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGEVPFRR*EIIGAG
Trigger: GCCGGCGCCTATGATTTCCCATCGCCGGAATGGGAC...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGGTCCCATTCCGGCGATaGGAAATCATAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWEVPFRR*EIIGAG
Trigger: GCCGGCGCCTATGATTTCCCATCGCCGGAATGGGAC...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQECGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTGGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TPRTEWISAAQQRSDPSLGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWERGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCAAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAARGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCTTCTCCCCAGCCCCTaGTGGGCACCAGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KIHLGEPAAPLHGQSGSLLLPSP*WAPARA
Trigger: TGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAG...CAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAALPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQELLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACAGTTGCCTGTCTCACCTaGGCCTGGGCAGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: GREALLPGAESTLAPITTVACLT*AWAAGL
Trigger: AAGTCCTGCTGCCCAGGCCCAGGTGAGACAGGCAAC...TGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCTACTGGGAAGCCCTCTaGGCCTGGGGCAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFYWEAL*AWGRPR
Trigger: TCTTGGCCTGCCCCAGGCCCAGAGGGCTTCCCAGTA...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp ACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAATCACTGGGCCTTACTaGGAAGCCCTCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSPTPREGSDHPEVSTGGITGPY*EALWAW
Trigger: CCAGGCCCAGAGGGCTTCCCAGTAAGGCCCAGTGAT...TCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGAGGAGGGATTCTTACTaGGGCAGGACGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GILAYSPRQIRRTAAEAGRRDSY*GRTEGA
Trigger: GGCGCCCTCCGTCCTGCCCCAGTAAGAATCCCTCCT...CCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672752.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTGTGTGGGCCTGGGGGTaGGATGGACCCAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: QKERLCQLTLGPKWQRGPVWAWG*DGPSTP
Trigger: AGGGGTGCTGGGTCCATCCCACCCCCAGGCCCACAC...AGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672479.1
3UTR CAA 72 bp GGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTaGGCCCCAATAACCACAGGTGACAAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GREALLPGAEST*APITTGDKVHL
Trigger: GAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGAACAGAGAACCGGTTTaGCTGACGAGCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGNREPV*LTSPGL
Trigger: AAGCCCCGGGCTCGTCAGTCAAACCGGTTCTCTGTT...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR TCA 90 bp AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCTGGGGGACCAGGACTaGGGCGCTGCTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KIHLGEPAAPLHGQSGSLLGDQD*GAAALL
Trigger: GAGCAGAGCAGCAGCGCCTCAGTCCTGGTCCCCCAG...CAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGATCTGCTGGATACAGTaGCTGGCATCCGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQICWIQ*LASASL
Trigger: CAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGAT...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGTCACTGCGGCACCCTTaGGCTTGGAGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRSLRHP*AWRPAT
Trigger: TGTTGCTGGCCTCCAAGCTCAAGGGTGCCGCAGTGA...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGATCACTGCGGCACCCTTaGGCTTGGAGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGSLRHP*AWRPAT
Trigger: TGTTGCTGGCCTCCAAGCTCAAGGGTGCCGCAGTGA...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCCATAGGCGCCGGCTTTaGTCTGCTGGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPHRRRL*SAGTGG
Trigger: ACCGCCTGTACCAGCAGATCAAAGCCGGCGCCTATG...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCATAGGCGCCGGCTTTaGTCTGCTGGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATHRRRL*SAGTGG
Trigger: ACCGCCTGTACCAGCAGATCAAAGCCGGCGCCTATG...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTCCTTGGCTTCCGGGGTaGCAGTGTCCCATTCCGGCG +
Preference number: 4 (lower is better)
Translates to: QKERLCQLTLGPKWQRGPPWLPG*QCPIPA
Trigger: CGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGG...AGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACTGGCCAGCATCGTGGTaGGAATGGCTCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDWPASW*EWLPSV
Trigger: AACTGAAGGGAGCCATTCTCACCACGATGCTGGCCA...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTAGGCGATGCAGGCTaGCTCGTCGCCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSAVGDAG*LVAHQV
Trigger: CACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGGTAGGCGATGCAGGCTaGCTCGTCGCCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: EHFEAGGSWRMLFSPLLQVGDAG*LVAHQV
Trigger: CACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC...CTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGTGTGGCCGTTCGCTCTaGAGTTGCGATGACTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRCGRSL*SCDDFC
Trigger: ACAAAAGTCATCGCAACTTCAGAGCGAACGGCCACA...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LFSPLLQCGWLRGKGVSSVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...AGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGGTGGACACCCATGCCTaGGGAAGCCCCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSPHSFSAVGLGGRECHLVDTHA*GSPSLA
Trigger: TGCCAGGCTGGGGCTTCCTCAGGCATGGGTGTCCAC...CAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSALRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGCTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGELRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GILAYSPRQIRRTAAEAGRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...CCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRERVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCAGGGTCAGACCACCCTaGGGTCAGCACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPRVRPP*GQHRRK
Trigger: CTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCT...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: HRGKGQTTLRSAQEEEDLASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...TAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TTGAAGGGAGACAGGAGGCCTTGGGTCAGGATTCGCACCATGGTGGGCACAAACGCAAGTAGGGGCACCTaGGAGGGCCACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LKGDRRPWVRIRTMVGTNASRGT*EGHIPH
Trigger: GTGGGGGATGTGGCCCTCTCAGGTGCCCCTACTTGC...GTTTGTGCCCACCATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCCCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGAGGGGAGAGAGGCAATaGAGACACACGCTCACGGGC +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATRGERQ*RHTLTG
Trigger: GCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCT...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGGGGAGAGAGGCAATaGAGACACACGCTCACGGGC +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFRGERQ*RHTLTG
Trigger: GCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCT...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGCAGGAGTCCAGCCAGTaGCTATCCCTGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWEQESSQ*LSLPVP
Trigger: AGGAACTGGCAGGGATAGTCACTGGCTGGACTCCTG...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp GTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACGCTCACGGGCCCCCCTGGCACTTGGAGAGTaGCACAGTGGACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VIRRQGERGNEDTRSRAPLALGE*HSGQEV
Trigger: CACCTCCTGTCCACTGTGTCACTCTCCAAGTGCCAG...GGGGGCCCGTGAGCGTGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACTTGCCTGCCCGTGCTaGCGAGTGCAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGLACPC*RVQTEN
Trigger: GTTCTCTGTTTGCACTCGGCAGCACGGGCAGGCAAG...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTGCCTGCCCGTGCTaGCGAGTGCAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWLACPC*RVQTEN
Trigger: GTTCTCTGTTTGCACTCGGCAGCACGGGCAGGCAAG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRNLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGACTGAGGCGCTGCTaGTCTGCTCCCGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGGLRRC*SAPEPR
Trigger: CCTAGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCC...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGCCAGGACTGAGGCGCTaGTGCTCTGCTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGPGLRR*CSAPEP
Trigger: AGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCCTGG...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGCCAGGACTGAGGCGCTaGTGCTCTGCTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: EHFEAGGSWRMLFSPLLQPGLRR*CSAPEP
Trigger: AGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCCTGG...CTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGCCGAGAAGGCTCCCTTaGCCAATTCCTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQEPRRLP*PIPRRA
Trigger: AGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTCGG...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGTCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKSAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGTCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGESAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGTCAGCAGGCGGCAGATaGGGGCTTCACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSASAGGR*GLHAPA
Trigger: AGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGA...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCCGGACGATGTTGGGGTaGTTCAGCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFRTMLG*FSRRQM
Trigger: CATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCG...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGTGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PVSAHLGTEMAERPFSPECKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...CTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGTGCGAGATCCAGGGGTaGTTAAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGECEIQG*LRASAA
Trigger: AGCTGCCGAAGCCCTTAAGCACCCCTGGATCTCGCA...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGTGCGAGATCCAGGGGTaGTTAAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERCEIQG*LRASAA
Trigger: AGCTGCCGAAGCCCTTAAGCACCCCTGGATCTCGCA...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGTGCGAGATCCAGGGGTaGTTAAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVSAHLGTEMAERPFSPECEIQG*LRASAA
Trigger: AGCTGCCGAAGCCCTTAAGCACCCCTGGATCTCGCA...CTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp CTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGAGGTGCGAGATCCAGGGGTaGTTAAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAYSPRQIRRTAAEAGERCEIQG*LRASAA
Trigger: AGCTGCCGAAGCCCTTAAGCACCCCTGGATCTCGCA...CCTCTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGTGCGAGATCCAGGGGTaGTTAAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGCEIQG*LRASAA
Trigger: AGCTGCCGAAGCCCTTAAGCACCCCTGGATCTCGCA...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGGCCACGGTGGAGCGGTaGGAGATCCAGGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGEATVER*EIQGCL
Trigger: TAAGCACCCCTGGATCTCGCACCGCTCCACCGTGGC...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGCCACGGTGGAGCGGTaGGAGATCCAGGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGATVER*EIQGCL
Trigger: TAAGCACCCCTGGATCTCGCACCGCTCCACCGTGGC...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGACGGTCTCCTGTCTGTaGATGCAGGATGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWETVSCL*MQDATV
Trigger: CACCGTGGCATCCTGCATGCACAGACAGGAGACCGT...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCTGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFCGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGEDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SSPHSFSAVGLGGRECHLGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...CAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGGACGGAGGGCGCCCCAGATCTGTGGAAGTGGACGATCTGCCATTTGCCATCCGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: RTEGAPDLWKWTICHLPSEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...GGATGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672089.1
CDS-3UTR GCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERSPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGAGGGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LAYSPRQIRRTAAEAGEREAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...CCTCTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCGGGGACAGTATCTCATaGTGGCAAAACACGGCCACA +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSGDSIS*WQNTAT
Trigger: TGTGGCCGTGTTTTGCCAGCATGAGATACTGTCCCC...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp GAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGCTGCAGACCTGGCGTTaGCTGTCTCACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EHFEAGGSWRMLFSPLLQLQTWR*LSHLGL
Trigger: CAGGCCCAGGTGAGACAGGCAACGCCAGGTCTGCAG...CTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp AGTGACGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGGCAGGCCAAGAGCCTaGCCCTGGGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SDGGGVMTWENSSKIHLGGRPRA*PWAWAA
Trigger: TGCTGCCCAGGCCCAGGGGCAGGCTCTTGGCCTGCC...TCCCAGGTGGATTTTGCTGGAATTCTCCCATGTCATCACCCCACCACCGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCCTCACCCCAAATCACTaGTCTTTCCCCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSLTPNH*SFPCSP
Trigger: TGGACTGCAGGGGAAAGAGCAGTGATTTGGGGTGAG...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACCTGGGGTAGCGATCTaGCTCCACTTCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGPGVAI*LHFSGT
Trigger: AGTGCCAGAGAAGTGGAGGCAGATCGCTACCCCAGG...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPWCARA*CSGTTV
Trigger: CACTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510347.2
ENST00000672396.1
CDS-3UTR GCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACAGCACTTCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGQHFKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGAAGTGCTG...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672785.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGTGCTGCCTTCCACTaGGAAACCTGCTCTCGGACG +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPRAAFH*ETCSRT
Trigger: CGTCCGAGAGCAGGTTTCGCAGTGGAAGGCAGCACG...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR CCA 90 bp GGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGAGGTGAGGCTTGGGACTaGGGGACCAGGACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GAESTLAPITTGDKVHLRGEAWD*GTRTEA
Trigger: CGCCTCAGTCCTGGTCCCCCAGTCCCAAGCCTCACC...TCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGACAGGCAGGTGAGGCTTaGGACTGGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGQAGEA*DWGTRT
Trigger: AGTCCTGGTCCCCCAGTCCCAAGCCTCACCTGCCTG...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGCAGGCAGGTGAGGCTTaGGACTGGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGEQAGEA*DWGTRT
Trigger: AGTCCTGGTCCCCCAGTCCCAAGCCTCACCTGCCTG...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGATTGGCAGCATACTCCTaGCCAGCCAGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGLAAYS*PASTFT
Trigger: TGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAA...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCGTAGTCGGACGATGTTaGGGTGCTTCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFVVGRC*GASAGG
Trigger: GCCGCCTGCTGAAGCACCCCAACATCGTCCGACTAC...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGTAGTCGGACGATGTTaGGGTGCTTCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGVVGRC*GASAGG
Trigger: GCCGCCTGCTGAAGCACCCCAACATCGTCCGACTAC...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCGTAGTCGGACGATGTTaGGGTGCTTCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPVVGRC*GASAGG
Trigger: GCCGCCTGCTGAAGCACCCCAACATCGTCCGACTAC...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCTGCACCACCCCCATCTaGTGGCAGTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCCTTPI*WQCSTA
Trigger: GGCTGTGCTGCACTGCCACCAGATGGGGGTGGTGCA...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCCCGGCTTTGATCTGCTaGTACAGGCGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFPALIC*YRRCWS
Trigger: GGACCAGCACCGCCTGTACCAGCAGATCAAAGCCGG...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCCCGGCTTTGATCTGCTaGTACAGGCGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPPALIC*YRRCWS
Trigger: GGACCAGCACCGCCTGTACCAGCAGATCAAAGCCGG...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GATGACGGGGGTGGGGTGGGCAGGTTAATGTTGGAGGTGGACTTCACCAGAAGGTGCAGGATGCCACGGTaGAGCGGTGCGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: DDGGGVGRLMLEVDFTRRCRMPR*SGARSR
Trigger: CCTGGATCTCGCACCGCTCCACCGTGGCATCCTGCA...CCTTCTGGTGAAGTCCACCTCCAACATTAACCTGCCCACCCCACCCCCGTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGCCTCGATGGTGGTGTTaGTGCTCTCTGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKPRWWC*CSLRIP
Trigger: AGGAATCCTCAGAGAGCACCAACACCACCATCGAGG...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510347.2
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
CDS-3UTR CCA 90 bp TGGCCTTCACAGTGGGGGCCATCTCAGCCTGGGGTAGCGATCTGCCTCCACTTCTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: WPSQWGPSQPGVAICLHFCGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...GAAGTGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCCCACTGTGAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWECGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGECGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCCATCAGGTGGATGTaGGGATTCAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATPIRWM*GFRMVV
Trigger: CACCACCATCCTGAATCCCCACATCCACCTGATGGG...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQERGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ECHLPFPGDTGRGEVWERLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGCTCCTTCAGTGCGGTTaGCTTAGGGGGAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGLLQCG*LRGKGV
Trigger: CACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAG...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GILAYSPRQIRRTAAEAGEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...CCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCAACCTTGGGACCGAAATaGCAGAGAGGCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAATLGPK*QRGPSP
Trigger: GGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGT...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGACCTTGGGACCGAAATaGCAGAGAGGCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGTLGPK*QRGPSP
Trigger: GGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGT...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCTGTGTCAGCTCACCTTaGGACCGAAATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSCVSSP*DRNGRE
Trigger: CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACA...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCATGTCTCACCTGGGCCTaGGCAGCAGGACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: DRNGREALLPGAESTLAPCLTWA*AAGLEK
Trigger: TTTCTCAAGTCCTGCTGCCCAGGCCCAGGTGAGACA...TGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGAAACCAGGAGGCCTaGGCAGCATCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLGNQEA*AASLLA
Trigger: GGCCAGGAGAGATGCTGCCCAGGCCTCCTGGTTTCC...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGTGCTCCTTCATCGGCTaGATGGGAACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQCSFIG*MGTKNP
Trigger: AGGGTTCTTTGTTCCCATCCAGCCGATGAAGGAGCA...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGAGGTGGGGGAGGGGATaGAGCCTGACCAGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRERWGRG*SLTRSR
Trigger: TCTAGACCTGGTCAGGCTCCATCCCCTCCCCCACCT...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGGGGCCATCTCAGCCTaGGGTAGCGATCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSAGAISA*GSDLPP
Trigger: TGGAGGCAGATCGCTACCCCAGGCTGAGATGGCCCC...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GCTGAAGAAGAGCTCAGACCTTGCTCGGTAATTACAGCAGCCCCTGGTGAAGGCGCCCACCCACAGGCGTaGCCTTCACAGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AEEELRPCSVITAAPGEGAHPQA*PSQWGP
Trigger: TGGCCCCCACTGTGAAGGCCACGCCTGTGGGTGGGC...GCCTTCACCAGGGGCTGCTGTAATTACCGAGCAAGGTCTGAGCTCTTCTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTTGTGGTGGCACCAGGTaGCTGCCCACCCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLCGGTR*LPTHRR
Trigger: ACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACA...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTGTGGTGGCACCAGGTaGCTGCCCACCCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: QKERLCQLTLGPKWQRGPCGGTR*LPTHRR
Trigger: ACGCCTGTGGGTGGGCAGCCACCTGGTGCCACCACA...AGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACATCAGGATCATCCCTaGTGCCCTGTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAAHQDHP*CPVVAP
Trigger: TGGTGCCACCACAGGGCACCAGGGATGATCCTGATG...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGCCAGCACGGGGAGTCTaGCAAACTCATCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRPARGV*QTHPPK
Trigger: TTTTGGGGGATGAGTTTGCCAGACTCCCCGTGCTGG...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGAGGGCCTGGAGGAGGTaGAATAGAGCAAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQRAWRR*NRANFV
Trigger: GACAAAGTTTGCTCTATTCCACCTCCTCCAGGCCCT...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672479.1
3UTR CAA 72 bp CCACAGTCCCAAAAGGAACGCCTGTGTCAGCTCACCTaGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PQSQKERLCQLT*GPKWQRGPSPR
Trigger: CCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTGGGACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348628.10
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGCTGATGGTCTCTGGCTaGCAGCTTCTTTGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRLMVSG*QLLCVD
Trigger: ATCAACACAAAGAAGCTGTCAGCCAGAGACCATCAG...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRSRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGATCTGCTGGATACAGTaGCTGGCATCCGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GVSSALPRGHWKRRGLGEICWIQ*LASASL
Trigger: CAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGAT...CTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTCACTGCGGCACCCTTaGGCTTGGAGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: EHFEAGGSWRMLFSPLLQSLRHP*AWRPAT
Trigger: TGTTGCTGGCCTCCAAGCTCAAGGGTGCCGCAGTGA...CTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGCATAGGCGCCGGCTTTaGTCTGCTGGTACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKHRRRL*SAGTGG
Trigger: ACCGCCTGTACCAGCAGATCAAAGCCGGCGCCTATG...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GCTGAAGAAGAGCTCAGACCTTGCTCGGTAATTACAGCAGCCCCTGGTGAAGGCCCTTGGCTTCCGGGGTaGCAGTGTCCCATTCCGGCG +
Preference number: 4 (lower is better)
Translates to: AEEELRPCSVITAAPGEGPWLPG*QCPIPA
Trigger: CGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGG...GCCTTCACCAGGGGCTGCTGTAATTACCGAGCAAGGTCTGAGCTCTTCTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp ACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATGGCCAGCATCGTGGTaGGAATGGCTCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TEMAERPFSPELSPPWPQWPASW*EWLPSV
Trigger: AACTGAAGGGAGCCATTCTCACCACGATGCTGGCCA...TTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACCCCAATAACCACAGGTaGCAAGGTCCACCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDPNNHR*QGPPQR
Trigger: TCTCTGAGGTGGACCTTGTCACCTGTGGTTATTGGG...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGCAGGTATTTCCATCCTaGCAGCCTCCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGQVFPS*QPPSSS
Trigger: AGAGGAGGAGGGAGGCTGTCAGGATGGAAATACCTG...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAAAGGACAGAGGCCAGTaGTGGACCAGCTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGKDRGQ*WTSLET
Trigger: GGTTTCCAAGCTGGTCCATCACTGGCCTCTGTCCTT...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp ACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAGGAGGGGATGGAGCCTaGCCAGGTCTAGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: TSPTPREGSDHPEVSTGGGGDGA*PGLEVN
Trigger: GTTTACTTCTAGACCTGGTCAGGCTCCATCCCCTCC...TCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGAGGAGGGGATGGAGCCTaGCCAGGTCTAGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGGGDGA*PGLEVN
Trigger: GTTTACTTCTAGACCTGGTCAGGCTCCATCCCCTCC...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCGCCCGTGCTGCCGAGTaGAAACAGAGAACCGGTTTG +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPARAAE*KQRTGL
Trigger: CAAACCGGTTCTCTGTTTGCACTCGGCAGCACGGGC...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGCCCGTGCTGCCGAGTaGAAACAGAGAACCGGTTTG +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGARAAE*KQRTGL
Trigger: CAAACCGGTTCTCTGTTTGCACTCGGCAGCACGGGC...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGACTTGCCTGCCCGTGCTaGCGAGTGCAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGLACPC*RVQTEN
Trigger: GTTCTCTGTTTGCACTCGGCAGCACGGGCAGGCAAG...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCTTGCCTGCCCGTGCTaGCGAGTGCAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPLACPC*RVQTEN
Trigger: GTTCTCTGTTTGCACTCGGCAGCACGGGCAGGCAAG...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTACCACTTGCCTGCCCGTaGTGCCGAGTGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLPLACP*CRVQTE
Trigger: CTCTGTTTGCACTCGGCAGCACGGGCAGGCAAGTGG...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGNLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSANLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTCCAGGACTGAGGCGCTaGTGCTCTGCTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFPGLRR*CSAPEP
Trigger: AGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCCTGG...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCCGAGAAGGCTCCCTTaGCCAATTCCTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWPRRLP*PIPRRA
Trigger: AGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTCGG...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGGTCCCTCCTCTGAGATaGTGTCATGTAGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRVPPLR*CHVVGR
Trigger: TCGTCCGACTACATGACAGCATCTCAGAGGAGGGAC...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCGTCCCTCCTCTGAGATaGTGTCATGTAGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATVPPLR*CHVVGR
Trigger: TCGTCCGACTACATGACAGCATCTCAGAGGAGGGAC...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGTCTGCCAGCTTCACTaGGGCACCCTTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGVCQLH*GTLELG
Trigger: TCCAAGCTCAAGGGTGCCGCAGTGAAGCTGGCAGAC...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCTGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPCKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRECKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCTGCGAGATCCAGGGGTaGTTAAGGGCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFCEIQG*LRASAA
Trigger: AGCTGCCGAAGCCCTTAAGCACCCCTGGATCTCGCA...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGSVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSASVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCACGGTCTCCTGTCTGTaGATGCAGGATGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRTVSCL*MQDATV
Trigger: CACCGTGGCATCCTGCATGCACAGACAGGAGACCGT...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGTGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKWCARA*CSGTTG
Trigger: ACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCTGGAAGTGGACGATCTaGCATTTGCCATCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPWKWTI*HLPSRR
Trigger: CCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCA...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCGACAGAGTGGATCTCTaGGGCACAGCAACGCAGCGA +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRDRVDL*GTATQR
Trigger: TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTC...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGTGGGGAGAGGGGGCCAGTaGTGTGGACACCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PESVLASDASTVPKGTPVGRGGQ*CGHPCL
Trigger: CAGGCATGGGTGTCCACAGCACTGGCCCCCTCTCCC...CACAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCCTGCCTTCCTCATCATaGCACCCCTCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRLPSSS*HPSFSP
Trigger: TGGGGAGAAGGAGGGGTGGCATGATGAGGAAGGCAG...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGGAAGGGAGTGTCATCTaGCCTTCCCCGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: EHFEAGGSWRMLFSPLLQEGSVI*PSPGTL
Trigger: CAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTC...CTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPSPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GGSWRMLFSPLLQCGWLRSPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...CCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRESPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGATCCCCACTCCTTCAGTaGGGTTGGCTTAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGSPLLQ*GWLRGK
Trigger: CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGA...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGATGCGAACCCGAGGCTaGAGGATGAGGCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGMRTRG*RMRHEE
Trigger: CTCTTCATGCCTCATCCTGCAGCCTCGGGTTCGCAT...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp TCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGCTCACCCCAAATCACTaGTCTTTCCCCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSALPRGHWKRRGLGEGRLTPNH*SFPCSP
Trigger: TGGACTGCAGGGGAAAGAGCAGTGATTTGGGGTGAG...CCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCCGATGGTGGTGTTGGTaGTCTCTGAGGATTCCATTA +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPRWWCW*SLRIPL
Trigger: TAATGGAATCCTCAGAGAGCACCAACACCACCATCG...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGCTTGCCTGCCCGTGCTaGCTTCCACTGCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGELACPC*LPLRNL
Trigger: CAGGTTTCGCAGTGGAAGGCAGCACGGGCAGGCAAG...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR CCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGTTGGCAGCATACTCCTaGCCAGCCAGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWLAAYS*PASTFT
Trigger: TGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAA...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGTTGGCAGCATACTCCTaGCCAGCCAGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLLAAYS*PASTFT
Trigger: TGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAA...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGGCTTCTGATGGTCTCTaGCTGACAGCTTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LPFPGDTGRGEVWERDGRASDGL*LTASLC
Trigger: ACACAAAGAAGCTGTCAGCCAGAGACCATCAGAAGC...CCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAGGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCGCTGGATACAGTGACTaGCATCCGCCTCACTGTAAT +
Preference number: 4 (lower is better)
Translates to: ERATSPTPREGSDHPEVSAGYSD*HPPHCN
Trigger: ATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGC...GCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGGCTGGATACAGTGACTaGCATCCGCCTCACTGTAAT +
Preference number: 4 (lower is better)
Translates to: FSPAPGGHQPGHSSLQPKAGYSD*HPPHCN
Trigger: ATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGC...CTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGCCCCCTCCACCTCTATaGCCAGGCCAAAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGEPPPPL*PGQSLP
Trigger: TGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGG...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTATGGTACAGGCGGTGCTaGTCCTCATCCCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLWYRRC*SSSQNG
Trigger: CCCGTTCTGGGATGAGGACCAGCACCGCCTGTACCA...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGTCCCATTCCGGCGATaGGAAATCATAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLVPFRR*EIIGAG
Trigger: GCCGGCGCCTATGATTTCCCATCGCCGGAATGGGAC...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTTGCAGGATGCCACGGTaGAGCGGTGCGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLCRMPR*SGARSR
Trigger: CCTGGATCTCGCACCGCTCCACCGTGGCATCCTGCA...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACGGATTGTCTTCATCCTCGATaGTGGTGTTGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALPRGHWKRRGLGEGRTDCLHPR*WCWCSL
Trigger: CAGAGAGCACCAACACCACCATCGAGGATGAAGACA...ATCCGTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGCCTGTTTCCGCACTTTaGTGTCTTCATCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQPVSAL*CLHPRW
Trigger: CCATCGAGGATGAAGACACCAAAGTGCGGAAACAGG...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGTGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATCGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCCCCATCAGGTGGATGTaGGGATTCAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGEPAAPLHGQSGSLRHSPIRWM*GFRMVV
Trigger: CACCACCATCCTGAATCCCCACATCCACCTGATGGG...GCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGCCCATCAGGTGGATGTaGGGATTCAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGPIRWM*GFRMVV
Trigger: CACCACCATCCTGAATCCCCACATCCACCTGATGGG...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGACCCATCAGGTGGATGTaGGGATTCAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TSPTPREGSDHPEVSTGGPIRWM*GFRMVV
Trigger: CACCACCATCCTGAATCCCCACATCCACCTGATGGG...TCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GILAYSPRQIRRTAAEAGGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...CCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AGAAATTCCCAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATAGCCTGGTCCCTCAGTaGGGCAGGACGGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RNSQCFAVVIRRQGERGNSLVPQ*GRTEGA
Trigger: GGCGCCCTCCGTCCTGCCCCACTGAGGGACCAGGCT...ATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGGAATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GGCAGAGAGGCCCTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACAACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GREALLPGAESTLAPITTTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...TGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAGGGCCTCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp CTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCCCAGCAAAATCCACCTaGGAGAACCAGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LGEPAAPLHGQSGSLRHSPAKST*ENQQLH
Trigger: GTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGG...GCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCAAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PPGRTSSSTPRTEWISAARGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...TGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GSWRMLFSPLLQCGWLRGRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...CCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCCTTCCCCGGGGACACTaGAAGAGGAGAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCLPRGH*KRRGLG
Trigger: TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAG...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCCCAGTGCTTTGCTGTaGTCATCAGACGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATPSALL*SSDAKG
Trigger: CCCCTTGGCGTCTGATGACCACAGCAAAGCACTGGG...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGAGTGATGGACCAGCTTaGAAACCAGGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGRESDGPA*KPGGLG
Trigger: GCCCAGGCCTCCTGGTTTCCAAGCTGGTCCATCACT...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCAGCTCAGTTTCCTCTaGCAGGGAAACCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAPLHGQSGSLRHSNAATQLSFL*QGNQAP
Trigger: TGGAGCTTGGTTTCCCTGCCAGAGGAAACTGAGCTG...GGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGCAGCTCAGTTTCCTCTaGCAGGGAAACCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PHPPHRGKGQTTLRSAQEQLSFL*QGNQAP
Trigger: TGGAGCTTGGTTTCCCTGCCAGAGGAAACTGAGCTG...CTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp TCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCGGAGACAGGAGGCCTTaGGTCAGGATTCGCACCATG +
Preference number: 4 (lower is better)
Translates to: SPHSFSAVGLGGRECHLPGDRRP*VRIRTM
Trigger: CATGGTGCGAATCCTGACCCAAGGCCTCCTGTCTCC...GGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTCCTGGTCCCTCAGCCTaGGAGGCAGGAAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LFSPLLQCGWLRGKGVSSPGPSA*EAGRRD
Trigger: ATCCCTCCTTCCTGCCTCCCAGGCTGAGGGACCAGG...AGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672752.1
ENST00000672829.1
CDS-3UTR TCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAAACAGAGAACCGGTTTaGCTGACGAGCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGNREPV*LTSPGL
Trigger: AAGCCCCGGGCTCGTCAGTCAAACCGGTTCTCTGTT...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCTCACGCTCCAGCTTCTaGTGGTCTCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCSRSSF*WSLADS
Trigger: GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGA...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCTGGCCAGCATCGTGGTaGGAATGGCTCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPWPASW*EWLPSV
Trigger: AACTGAAGGGAGCCATTCTCACCACGATGCTGGCCA...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp AAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGATGGCCAGCATCGTGGTaGGAATGGCTCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: KGVSSALPRGHWKRRGLGWPASW*EWLPSV
Trigger: AACTGAAGGGAGCCATTCTCACCACGATGCTGGCCA...TCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGGGTGTTGGTGCTCTCTaGGGATTCCTTCACACCATC +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWEGVGAL*GFLHTI
Trigger: GATGGTGTGAAGGAATCCTCAGAGAGCACCAACACC...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510347.2
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
CDS-3UTR TCA 90 bp TCCTTCTCCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCACAAGCAGGTTTTCTTaGTGCAGGTACAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SFSPAPGGHQPGHSSLQPTSRFS*CRYRSD
Trigger: GTCACTTCTGTACCTGCATCAAGAAAACCTGCTTGT...GGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGGAAGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGTCAGTGCTGGCATCTaGTGCTTCCACAGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GKGVSSALPRGHWKRRGLVSAGI*CFHSPK
Trigger: TTTGGGACTGTGGAAGCATCAGATGCCAGCACTGAC...CAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCCCGAGGCTGCAGGATaGGGCATGAAGAGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PVSAHLGTEMAERPFSPEPEAAG*GMKSRN
Trigger: ATTTCTACTCTTCATGCCTCATCCTGCAGCCTCGGG...CTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp GTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACCCGAGGCTGCAGGATaGGGCATGAAGAGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: VSSALPRGHWKRRGLGEGPEAAG*GMKSRN
Trigger: ATTTCTACTCTTCATGCCTCATCCTGCAGCCTCGGG...TCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCCAGGAGTCCAGCCAGTaGCTATCCCTGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCQESSQ*LSLPVP
Trigger: AGGAACTGGCAGGGATAGTCACTGGCTGGACTCCTG...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCTGCTCTCGGACGCCCTaGCCATACCGCACACAATAC +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSACSRTP*PYRTQY
Trigger: GTATTGTGTGCGGTATGGTCAGGGCGTCCGAGAGCA...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672479.1
CDS-3UTR GCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGGCCCGTGCTGCCGAGTaGAAACAGAGAACCGGTTTG +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGEARAAE*KQRTGL
Trigger: CAAACCGGTTCTCTGTTTGCACTCGGCAGCACGGGC...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTACCACTTGCCTGCCCGTaGTGCCGAGTGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: HRGKGQTTLRSAQEEEDLPLACP*CRVQTE
Trigger: CTCTGTTTGCACTCGGCAGCACGGGCAGGCAAGTGG...TAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGAACCTAGGGACCACTTaGCTGCCCGTGCTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSPHSFSAVGLGGRECHLNLGTT*LPVLPS
Trigger: ACTCGGCAGCACGGGCAGGCAAGTGGTCCCTAGGTT...CAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCCGAGAAGGCTCCCTTaGCCAATTCCTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPPRRLP*PIPRRA
Trigger: AGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTCGG...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGAGCACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCCCGAGAAGGCTCCCTTaGCCAATTCCTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSTLRQEAPGVCSSPHSFPRRLP*PIPRRA
Trigger: AGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTCGG...GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTACGGACGATGTTGGGGTaGTTCAGCAGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: HRGKGQTTLRSAQEEEDLRTMLG*FSRRQM
Trigger: CATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCG...TAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCGTCCCTCCTCTGAGATaGTGTCATGTAGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: LCQLTLGPKWQRGPSPRSVPPLR*CHVVGR
Trigger: TCGTCCGACTACATGACAGCATCTCAGAGGAGGGAC...GCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCGTCTGCCAGCTTCACTaGGGCACCCTTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSAVCQLH*GTLELG
Trigger: TCCAAGCTCAAGGGTGCCGCAGTGAAGCTGGCAGAC...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGTCTGCCAGCTTCACTaGGGCACCCTTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKVCQLH*GTLELG
Trigger: TCCAAGCTCAAGGGTGCCGCAGTGAAGCTGGCAGAC...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGGTCTGCCAGCTTCACTaGGGCACCCTTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGVCQLH*GTLELG
Trigger: TCCAAGCTCAAGGGTGCCGCAGTGAAGCTGGCAGAC...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGTGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ILAYSPRQIRRTAAEAGECKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...CTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACATATCCAGGAGTCCCTaGAAACCCAAACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDISRSP*KPKPCL
Trigger: CAGGCATGGTTTGGGTTTGCAGGGACTCCTGGATAT...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CAAAAGGAACGCCTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: QKERLCQLTLGPKWQRGPSVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...AGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAGGCGTTCCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTTCTGTGCATGCAGGATaGCACGGTGGAGCGGTGCGA +
Preference number: 4 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLSVHAG*HGGAVR
Trigger: TCGCACCGCTCCACCGTGGCATCCTGCATGCACAGA...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGACGGTCTCCTGTCTGTaGATGCAGGATGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKTVSCL*MQDATV
Trigger: CACCGTGGCATCCTGCATGCACAGACAGGAGACCGT...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCGTTCGAAGGCTGTCATaGCAGGGTCGCACATCTTCG +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPVRRLS*QGRTSS
Trigger: CGAAGATGTGCGACCCTGGCATGACAGCCTTCGAAC...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCCACCTCAGATGGTGTGCACGGGCTTaGTGTTCCGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: GAESTLAPITTGDKVHLRWCARA*CSGTTG
Trigger: ACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCA...TCTGAGGTGGACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTTGCGGATGTAGGCGATaGAGGCTGACTCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFCGCRR*RLTRRP
Trigger: TGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCA...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCTGGAAGTGGACGATCTaGCATTTGCCATCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSAWKWTI*HLPSRR
Trigger: CCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCA...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGGGTGGAAGTGGACGATCTaGCATTTGCCATCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RGKGQTTLRSAQEEEDLGWKWTI*HLPSRR
Trigger: CCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCA...CCCTAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 4 (lower is better)
Translates to: LFSPLLQCGWLRGKGVSSGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...AGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTGGGACGGACGGATGCTaGCTTCCTCATCATGCCACC +
Preference number: 4 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFGTDGC*LPHHAT
Trigger: GGTGGCATGATGAGGAAGGCAGCATCCGTCCGTCCC...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAAGAGGGACGGACGGATaGTGCCTTCCTCATCATGCC +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGRGTDG*CLPHHA
Trigger: GGCATGATGAGGAAGGCAGCATCCGTCCGTCCCTCT...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCGAGGCTCCTGGCGTATaGTCTTCTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSAEAPGV*SSPHSF
Trigger: GAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTC...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGGGGTGAGAGGTGGGGAGATGTGGCCGTTCGCTCTGAAGTTGCGATGACTTTTGGGCAGCAAGGTCTCTaGCAAGGACAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGERWGDVAVRSEVAMTFGQQGL*QGQRPV
Trigger: CACTGGCCTCTGTCCTTGGCAGAGACCTTGCTGCCC...AAAAGTCATCGCAACTTCAGAGCGAACGGCCACATCTCCCCACCTCTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp ACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTCAGGATCATCCCTGGTaGCCTGTGGTGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: TPREGSDHPEVSTGGRRLQDHPW*PVVAPG
Trigger: ACCTGGTGCCACCACAGGGCACCAGGGATGATCCTG...AAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp CTCAGTGGGGCAGGACGGAGGGCGCCCCAGATCTGTGGAAGTGGACGATCTGCCCGATGGTGGTGTTGGTaGTCTCTGAGGATTCCATTA +
Preference number: 4 (lower is better)
Translates to: LSGAGRRAPQICGSGRSARWWCW*SLRIPL
Trigger: TAATGGAATCCTCAGAGAGCACCAACACCACCATCG...GGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672089.1
CDS-3UTR CCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGCTGGATACAGTGACTaGCATCCGCCTCACTGTAAT +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGAGYSD*HPPHCN
Trigger: ATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCGGGCCTCGATGGTGGTGTTaGTGCTCTCTGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: SFSAVGLGGRECHLPFPGPRWWC*CSLRIP
Trigger: AGGAATCCTCAGAGAGCACCAACACCACCATCGAGG...CCCGGGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510347.2
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
CDS-3UTR CCA 90 bp ATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGACTGTCTTCATCCTCGATaGTGGTGTTGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ICPSPGTLEEERSGRGTDCLHPR*WCWCSL
Trigger: CAGAGAGCACCAACACCACCATCGAGGATGAAGACA...GTCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGATGTCTTCATCCTCGATaGTGGTGTTGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGCLHPR*WCWCSL
Trigger: CAGAGAGCACCAACACCACCATCGAGGATGAAGACA...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGATGTGGGGATTCAGGATaGTGGTGTGCACGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: WRMLFSPLLQCGWLRGKGCGDSG*WCARAC
Trigger: GCAAGCCCGTGCACACCACCATCCTGAATCCCCACA...TCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCCCCATCAGGTGGATGTaGGGATTCAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRPIRWM*GFRMVV
Trigger: CACCACCATCCTGAATCCCCACATCCACCTGATGGG...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FSPLLQCGWLRGKGVSSAGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...GGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGGCGCCCCAGATCTGTaGAAGTGGACGATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSAGAPDL*KWTICH
Trigger: ATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGACTCCACGGACAGAGTaGATCTCTGCGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: ENQQLHSTDRVDLCGTATTPRTE*ISAAQQ
Trigger: TTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGT...CGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RTSSSTPRTEWISAAQQRRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCAGAGGTGGGGAGATGTaGCCGTTCGCTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFRGGEM*PFALKL
Trigger: CAACTTCAGAGCGAACGGCCACATCTCCCCACCTCT...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HRGKGQTTLRSAQEEEDLRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...TAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGAGGGGGCCAGTGCTGTaGACACCCATGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSPHSFSAVGLGGRECHLRGPVL*TPMPEE
Trigger: TTCCTCAGGCATGGGTGTCCACAGCACTGGCCCCCT...CAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp CACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTAGAGGCAGGAGGCTCCTaGCGTATGCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HRGKGQTTLRSAQEEEDLEAGGS*RMLFSP
Trigger: TGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC...TAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp GGGCCACATCCCCCACACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGATACGACAAAGCTaGAATTCTCCAGGGATGACG +
Preference number: 4 (lower is better)
Translates to: GPHPPHRGKGQTTLRSAQEIRQS*NSPGMT
Trigger: CGTCATCCCTGGAGAATTCCAGCTTTGTCGTATCTC...CTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTGTGGGGGATGTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR CCA 90 bp TCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGACCTTGGGACCGAAATaGCAGAGAGGCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SWRMLFSPLLQCGWLRGKTLGPK*QRGPSP
Trigger: GGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGT...CTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp CTGTGTCAGCTCACCTTGGGACCGAAATGGCAGAGAGGCCCTTCTCCCCGGAGCTGTGTCAGCTCACCTTaGGACCGAAATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCQLTLGPKWQRGPSPRSCVSSP*DRNGRE
Trigger: CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACA...GCTCCGGGGAGAAGGGCCTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGTGTGTCAGCTCACCTTaGGACCGAAATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWECVSSP*DRNGRE
Trigger: CTCTCTGCCATTTCGGTCCCAAGGTGAGCTGACACA...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGGCGGACTTCCTGAGTCAGTGCTaGCATCTGATGCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: GGHQPGHSSLQPKTDQADFLSQC*HLMLPQ
Trigger: CTGTGGAAGCATCAGATGCCAGCACTGACTCAGGAA...GTCCGCCTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGTTCCTGAGTCAGTGCTaGCATCTGATGCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQFLSQC*HLMLPQ
Trigger: CTGTGGAAGCATCAGATGCCAGCACTGACTCAGGAA...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR CCA 90 bp CATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGAGGGACGGAGACAGTATCTCATGCTaGCAAAACACGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: HLPFPGDTGRGEVWERDGDSISC*QNTATQ
Trigger: CTGTGTGGCCGTGTTTTGCCAGCATGAGATACTGTC...TCCGTCCCTCTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp CTTCTCCCCGGAGCTGAGTCCACCTTGGCCCCAATAACCACAGGTGACAAGGTCAGTGATGGACCAGCTTaGAAACCAGGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLPGAESTLAPITTGDKVSDGPA*KPGGLG
Trigger: GCCCAGGCCTCCTGGTTTCCAAGCTGGTCCATCACT...GACCTTGTCACCTGTGGTTATTGGGGCCAAGGTGGACTCAGCTCCGGGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR CCA 90 bp GAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGATGGCTGTAGGGAACTaGCAGCTCAAAAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: EAGGSWRMLFSPLLQCGWMAVGN*QLKRGQ
Trigger: CTGTCCCCTTTTGAGCTGCCAGTTCCCTACAGCCAT...CCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR TCA 90 bp GCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATCAGTGGTCAGCATCTTATTaGTCAGATCCTTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: APGGHQPGHSSLQPKTDQWSASY*SDPWLP
Trigger: CGGAAGCCAAGGATCTGATCAATAAGATGCTGACCA...CTGATCTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTATGGCCAGCATCGTGGTaGGAATGGCTCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QEAPGVCSSPHSFSAVGLWPASW*EWLPSV
Trigger: AACTGAAGGGAGCCATTCTCACCACGATGCTGGCCA...TAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGGTGTTGGTGCTCTCTaGGGATTCCTTCACACCATC +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREGVGAL*GFLHTI
Trigger: GATGGTGTGAAGGAATCCTCAGAGAGCACCAACACC...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510347.2
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
CDS-3UTR TCA 90 bp AGGGAGTGTCATCTGCCCTTCCCCGGGGACACTGGAAGAGGAGAGGTCTGGGAGTGTGGCCGTTCGCTCTaGAGTTGCGATGACTTTTGT +
Preference number: 4 (lower is better)
Translates to: RECHLPFPGDTGRGEVWECGRSL*SCDDFC
Trigger: ACAAAAGTCATCGCAACTTCAGAGCGAACGGCCACA...CTCCCAGACCTCTCCTCTTCCAGTGTCCCCGGGGAAGGGCAGATGACACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp CAGTGCTTTGCTGTGGTCATCAGACGCCAAGGGGAGAGAGGCAATGAAGACACACTTAGGGGAGCACTTTaGGGCAGGAGGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QCFAVVIRRQGERGNEDTLRGAL*GRRLLA
Trigger: CGCCAGGAGCCTCCTGCCTCAAAGTGCTCCCCTAAG...TGTGTCTTCATTGCCTCTCTCCCCTTGGCGTCTGATGACCACAGCAAAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CCCCAGCCCCTGGTGGGCACCAGCCCGGGCATTCTAGCCTACAGCCCAAGACAGATTAGATTCCCTCTCTaGGATACGACAAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PQPLVGTSPGILAYSPRQIRFPL*DTTKLE
Trigger: TTCCAGCTTTGTCGTATCTCAGAGAGGGAATCTAAT...CTGTCTTGGGCTGTAGGCTAGAATGCCCGGGCTGGTGCCCACCAGGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR TCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGCCCAATAACCACAGGTaGCAAGGTCCACCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREPNNHR*QGPPQR
Trigger: TCTCTGAGGTGGACCTTGTCACCTGTGGTTATTGGG...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCCAATAACCACAGGTaGCAAGGTCCACCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PHSFSAVGLGGRECHLPFPNNHR*QGPPQR
Trigger: TCTCTGAGGTGGACCTTGTCACCTGTGGTTATTGGG...GAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTGCCCTTCCCGTCAGTGCTGGCATCTaGTGCTTCCACAGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PLLQCGWLRGKGVSSALPVSAGI*CFHSPK
Trigger: TTTGGGACTGTGGAAGCATCAGATGCCAGCACTGAC...GGGAAGGGCAGATGACACTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR TCA 90 bp CTAGCCTACAGCCCAAGACAGATCAGGCGGACAGCAGCTGAGGCTGGGGAGAGGGTCAGAGCTGGGAATTaGAGCCTACTCACCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LAYSPRQIRRTAAEAGERVRAGN*SLLTPN
Trigger: ATTTGGGGTGAGTAGGCTTCAATTCCCAGCTCTGAC...CCTCTCCCCAGCCTCAGCTGCTGTCCGCCTGATCTGTCTTGGGCTGTAGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671881.1
ENST00000672479.1
CDS-3UTR GCA 90 bp TTCCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGGGACTGAGGCGCTGCTaGTCTGCTCCCGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: FLSQCWHLMLPQSQKERLGLRRC*SAPEPR
Trigger: CCTAGGTTCGGGAGCAGAGCAGCAGCGCCTCAGTCC...CAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp ACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGCCGAGAAGGCTCCCTTaGCCAATTCCTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TLRQEAPGVCSSPHSFSAPRRLP*PIPRRA
Trigger: AGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTCGG...CGCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGGTCCCTCCTCTGAGATaGTGTCATGTAGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: GVCSSPHSFSAVGLGGREVPPLR*CHVVGR
Trigger: TCGTCCGACTACATGACAGCATCTCAGAGGAGGGAC...CTCCCTTCCCCCTAAGCCAACCGCACTGAAGGAGTGGGGAGAAGAGCATACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CACCGAGGGAAGGGTCAGACCACCCTGAGGTCAGCACAGGAGGAAGAAGACTTATGCAAACCCAAACCATaGCTGCTGCTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HRGKGQTTLRSAQEEEDLCKPKP*LLLPLH
Trigger: GTGGAGGGGGAGCAGCAGGCATGGTTTGGGTTTGCA...TAAGTCTTCTTCCTCCTGTGCTGACCTCAGGGTGGTCTGACCCTTCCCTCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000510347.2
ENST00000671881.1
ENST00000672089.1
ENST00000672396.1
ENST00000672479.1
ENST00000672752.1
ENST00000672829.1
CDS-3UTR GCA 90 bp TTCCTGAGTCAGTGCTGGCATCTGATGCTTCCACAGTCCCAAAAGGAACGCCTGGCGCCGGCTTTGATCTaGTGGTACAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLSQCWHLMLPQSQKERLAPALI*WYRRCW
Trigger: CCAGCACCGCCTGTACCAGCAGATCAAAGCCGGCGC...CAGGCGTTCCTTTTGGGACTGTGGAAGCATCAGATGCCAGCACTGACTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000671881.1
ENST00000672089.1
ENST00000672479.1
ENST00000672752.1
CDS-3UTR GCA 90 bp CACTTTGAGGCAGGAGGCTCCTGGCGTATGCTCTTCTCCCCACTCCTTCAGTGCGTTCGAAGGCTGTCATaGCAGGGTCGCACATCTTCG +
Preference number: 4 (lower is better)
Translates to: HFEAGGSWRMLFSPLLQCVRRLS*QGRTSS
Trigger: CGAAGATGTGCGACCCTGGCATGACAGCCTTCGAAC...GCACTGAAGGAGTGGGGAGAAGAGCATACGCCAGGAGCCTCCTGCCTCAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp GATGACGGGGGTGGGGTGGGCAGGTTAATGTTGGAGGTGGACTTCACCAGAAGGGTTCGAAGGCTGTCATaGCAGGGTCGCACATCTTCG +
Preference number: 4 (lower is better)
Translates to: DDGGGVGRLMLEVDFTRRVRRLS*QGRTSS
Trigger: CGAAGATGTGCGACCCTGGCATGACAGCCTTCGAAC...CCTTCTGGTGAAGTCCACCTCCAACATTAACCTGCCCACCCCACCCCCGTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000671881.1
ENST00000672479.1
ENST00000672752.1
ENST00000672785.1
ENST00000672829.1
CDS-3UTR GCA 90 bp CTCTTCTCCCCACTCCTTCAGTGCGGTTGGCTTAGGGGGAAGGGAGTGTCATCTTGGAAGTGGACGATCTaGCATTTGCCATCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LFSPLLQCGWLRGKGVSSWKWTI*HLPSRR
Trigger: