Pregenerated sensors for CAMK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000134072Ensembl transcript IDs: ENST00000256460.8, ENST00000397277.6, ENST00000411972.1, ENST00000421120.1, ENST00000482803.1, ENST00000496534.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTaGGTCCTCTTATCTTCTGCCAGGATCACCTCCGAGAAGGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: PSRASLAMHLMATSF*VLLSSARITSEKAP Trigger: GGGGGCCTTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR TCA 90 bp | TGCCCAGGTCATGCAGGTATTTCACAGCATCCAGCACCTGGAAGATaGGGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAA | + |
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Preference number: 1 (lower is better) Translates to: CPGHAGISQHPAPGR*GGWRPAPCRSLFPQ Trigger: TTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCCTCATCTTCCAGGTGCTGGATGCTGTGAAATACCTGCATGACCTGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCGCCCCTCCTGGCTGGTaGCCAGCTGCAGTTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSAPPGW*PAAVSS Trigger: TGAGGAAACTGCAGCTGGGCACCAGCCAGGAGGGGC...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGGCTGGTGCCCAGCTGCAGTTTCCTCATGTGCCGCACCACAGCCGTGGCCCATGCTGCCTTCCTTaGCCTCCAGGGCCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LLAGAQLQFPHVPHHSRGPCCLP*PPGPPW Trigger: CCAAGGAGGCCCTGGAGGGCAAGGAAGGCAGCATGG...GCCACGGCTGTGGTGCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCAGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCGGAAGGGGAGCAGGCTaGCCCCAAGCCCTCCCACGC | + |
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Preference number: 2 (lower is better) Translates to: LPSRASLAMHLMATSFCVGRGAG*PQALPR Trigger: GCGTGGGAGGGCTTGGGGGCAGCCTGCTCCCCTTCC...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCCCTTGGCAATGCATTTaGTGGCCACCAGCTTCTGCG | + |
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Preference number: 2 (lower is better) Translates to: EFHRRWRAHCPGPPSWRGPWQCI*WPPASA Trigger: CGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGG...GCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | GAGTTCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCGATCCCGGTGTACAATaGCCAGGTCATGCAGGTATT | + |
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Preference number: 2 (lower is better) Translates to: EFHRRWRAHCPGPPSWRGDPGVQ*PGHAGI Trigger: AATACCTGCATGACCTGGGCATTGTACACCGGGATC...GCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCCAAAGTCGGAGATCATaGTTTTGGAGTCTTCATCCA | + |
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Preference number: 2 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSQSRRS*FWSLHP Trigger: TGGATGAAGACTCCAAAATCATGATCTCCGACTTTG...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | CCGCACCACAGCCGTGGCATTGAAGGCTTGCATGGGTGCTGCAAGGCCTGCTCACGTCCTCTTATCTTCTaGCAGGATCACCTCCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PHHSRGIEGLHGCCKACSRPLIF*QDHLRE Trigger: TTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACG...TGAGCAGGCCTTGCAGCACCCATGCAAGCCTTCAATGCCACGGCTGTGGTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGATCTCATTCTCCATGCTaGCTTCCTTGCCCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRSHSPC*LPCPPG Trigger: CCCTGGAGGGCAAGGAAGGCAGCATGGAGAATGAGA...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCTCTGTTCAAAGAGTTTaGCATCATTCTCGTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSSVQRV*HHSRHR Trigger: TCTATGACGAGAATGATGCCAAACTCTTTGAACAGA...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR GCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGAGCTACAATGTTGGGGTaGTTGATCTTGTGCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRATMLG*LILCRT Trigger: TGTCCTGCACAAGATCAAGCACCCCAACATTGTAGC...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CAA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCCCCGGGTCCTCCATCTaGGAGAGGCCAAAGTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSPGSSI*ERPKSE Trigger: CTCCGACTTTGGCCTCTCCAAGATGGAGGACCCGGG...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR GCA 72 bp | CCTAGAGCTGGTGGGGCAGTGTGGGGGACAGTTCTGTaGCCGGCTCCACGCAGCAGTCTCGACAGCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: PRAGGAVWGTVL*PAPRSSLDSNS Trigger: GCTGTTGCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCCACCAGCTCTAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGATTGGGGTGCTTGATCTaGTGCAGGACAGCAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: SGPGLQGPRIPEFHRRWRLGCLI*CRTAIS Trigger: TGAGATTGCTGTCCTGCACAAGATCAAGCACCCCAA...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CAA 90 bp | CCGCACCACAGCCGTGGCATTGAAGGCTTGCATGGGTGCTGCAAGGCCTGCTCATCCAGGGCTACAATGTaGGGGTGCTTGATCTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: PHHSRGIEGLHGCCKACSSRATM*GCLILC Trigger: GCACAAGATCAAGCACCCCAACATTGTAGCCCTGGA...TGAGCAGGCCTTGCAGCACCCATGCAAGCCTTCAATGCCACGGCTGTGGTGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCCAAAAGCAGATTCTCTGGCTaGAGATCCCGGTGTACAATG | + |
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Preference number: 3 (lower is better) Translates to: STGGGEHTARVLHLGEAKSRFSG*RSRCTM Trigger: CATTGTACACCGGGATCTCAAGCCAGAGAATCTGCT...TTTGGCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CAA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCAGGCCCCCTAGCACTTaGAGAATGAGTCTCCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: LPSRASLAMHLMATSFCVRPPST*RMSLLL Trigger: CAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCT...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCCAAATCGGAGATCATGATTTaGGAGTCTTCATCCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: STGGGEHTARVLHLGEAKSEIMI*ESSSRL Trigger: CAGCCTGGATGAAGACTCCAAAATCATGATCTCCGA...TTTGGCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR TCA 72 bp | CTTCCTTGCCCTCCAGGGCCTCCTTGGCAATGCATTTaGTGGCCACCAGCTTCTGCGTCCTCTTATCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LPCPPGPPWQCI*WPPASASSYLL Trigger: CAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR GCA 72 bp | TTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTaGCAGGATCACCTCCGAGAAGGCCCCCTAGCACTT | + |
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Preference number: 3 (lower is better) Translates to: FDGHQLLRPLIF*QDHLREGPLAL Trigger: AAGTGCTAGGGGGCCTTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR GCA 72 bp | TCTGGCTTGAGATCCCGGTGTACAATGCCCAGGTCATaGAGGTATTTCACAGCATCCAGCACCTGGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: SGLRSRCTMPRS*RYFTASSTWKM Trigger: CATCTTCCAGGTGCTGGATGCTGTGAAATACCTGCATGACCTGGGCATTGTACACCGGGATCTCAAGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | CTCCTGGCTGGTGCCCAGCTGCAGTTTCCTCATGTGCCGCACCACAGCCGTGGCCGCCCGCGCTCTTGCTaGAGCTGGGGCTCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLAGAQLQFPHVPHHSRGRPRSC*SWGSAR Trigger: CCGAGCCGAGCCCCAGCTCCAGCAAGAGCGCGGGCG...GCCACGGCTGTGGTGCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCAGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCGTCAGCAGCTCCCCATaGCTCGCCGTCTGCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSVSSSP*LAVCPC Trigger: GCAGGGGCAGACGGCGAGCCATGGGGAGCTGCTGAC...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | GAGTTCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCCCAGCACCTGGAAGATaGGGCGGCTGGCGTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: EFHRRWRAHCPGPPSWRGPAPGR*GGWRPA Trigger: AGCGGGACGCCAGCCGCCTCATCTTCCAGGTGCTGG...GCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CCGCACCACAGCCGTGGCATTGAAGGCTTGCATGGGTGCTGCAAGGCCTGCTCACCATGGCTCGCCGTCTaGCCCTGCCCCTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PHHSRGIEGLHGCCKACSPWLAV*PCPSWL Trigger: CAGCCAGGAGGGGCAGGGGCAGACGGCGAGCCATGG...TGAGCAGGCCTTGCAGCACCCATGCAAGCCTTCAATGCCACGGCTGTGGTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGACCACGCAGAGGATCATaGCCCGAGGTCCAGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SGPGLQGPRIPEFHRRWRPRRGS*PEVQGP Trigger: AGGGCCCTGGACCTCGGGTCATGATCCTCTGCGTGG...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CTCCTGGCTGGTGCCCAGCTGCAGTTTCCTCATGTGCCGCACCACAGCCGTGGCCGGTGGAGAGCACACTaGCCGGGTCCTCCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLAGAQLQFPHVPHHSRGRWRAH*PGPPSW Trigger: CCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCG...GCCACGGCTGTGGTGCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCAGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGATCACCGCTGCGTGCCTaGGCCACCCGCCCGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRSPLRA*ATRPRS Trigger: AGAGCGCGGGCGGGTGGCCCAGGCACGCAGCGGTGA...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCGTTGGCGCCGAGCTGTaGCCGCGGTCCTCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPSRASLAMHLMATSFCVVGAEL*PRSSPL Trigger: CAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCAAC...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCCCTTGGCAATGCATTTaGTGGCCACCAGCTTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSPWQCI*WPPASA Trigger: CGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGG...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGACCCAGCATGGCCCACTaGCCCCCGACCACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRPSMAH*PPTTAR Trigger: CCTGGCTGTGGTCGGGGGGCAGTGGGCCATGCTGGG...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CCGCACCACAGCCGTGGCATTGAAGGCTTGCATGGGTGCTGCAAGGCCTGCTCACCATGCTGCCTTCCTTaGCCTCCAGGGCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PHHSRGIEGLHGCCKACSPCCLP*PPGPPW Trigger: CCAAGGAGGCCCTGGAGGGCAAGGAAGGCAGCATGG...TGAGCAGGCCTTGCAGCACCCATGCAAGCCTTCAATGCCACGGCTGTGGTGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CCGCACCACAGCCGTGGCATTGAAGGCTTGCATGGGTGCTGCAAGGCCTGCTCAGCCCCTCCTGGCTGGTaGCCAGCTGCAGTTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PHHSRGIEGLHGCCKACSAPPGW*PAAVSS Trigger: TGAGGAAACTGCAGCTGGGCACCAGCCAGGAGGGGC...TGAGCAGGCCTTGCAGCACCCATGCAAGCCTTCAATGCCACGGCTGTGGTGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCCTGGGAGGCCCGCGGTaGTTGGCGCCGAGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSLGGPR*LAPSCG Trigger: GCCACAGCTCGGCGCCAACCACCGCGGGCCTCCCAG...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGATGCAGTTTCCTCATGTaGCGCACCACAGCCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGPGLQGPRIPEFHRRWRCSFLM*RTTAVA Trigger: TGCCACGGCTGTGGTGCGGCACATGAGGAAACTGCA...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | TCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCCAAATGGCTGGTGCCCAGCTaGAGTTTCCTCATGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: STGGGEHTARVLHLGEAKWLVPS*SFLMCR Trigger: GCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCA...TTTGGCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGAGAAGGCTTGCATGGGTaGTGCAAGGCCTGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SGPGLQGPRIPEFHRRWREGLHG*CKACSQ Trigger: CTGTGAGCAGGCCTTGCAGCACCCATGCAAGCCTTC...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCCCATCAAGTGCCGGATaGAATCTTTGGCAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSPSSAG*NLWQSQ Trigger: CTGACTCTGCCAAAGATTTCATCCGGCACTTGATGG...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGATCTCATTCTCCATGCTaGCTTCCTTGCCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SGPGLQGPRIPEFHRRWRSHSPC*LPCPPG Trigger: CCCTGGAGGGCAAGGAAGGCAGCATGGAGAATGAGA...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTGCCAGGATCACCTCCGGAAGGGGAGCAGGCTaGCCCCAAGCCCTCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: HLMATSFCVLLSSARITSGRGAG*PQALPR Trigger: GCGTGGGAGGGCTTGGGGGCAGCCTGCTCCCCTTCC...GGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTGCCAGGATCACCTCCACCCGCCCGCGCTCTTaGTGGAGCTGGGGCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: HLMATSFCVLLSSARITSTRPRS*WSWGSA Trigger: AGCCGAGCCCCAGCTCCAGCAAGAGCGCGGGCGGGT...GGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCTGCCCCTGCCCCTCCTaGCTGGTGCCCAGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSCPCPS*LVPSCS Trigger: ACTGCAGCTGGGCACCAGCCAGGAGGGGCAGGGGCA...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCCCACAGCCGTGGCATTaGAGGCTTGCATGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPSRASLAMHLMATSFCVPQPWH*RLAWVL Trigger: CAGCACCCATGCAAGCCTTCAATGCCACGGCTGTGG...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | CTCCTGGCTGGTGCCCAGCTGCAGTTTCCTCATGTGCCGCACCACAGCCGTGGCCGTCCTCTTATCTTCTaGCAGGATCACCTCCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLAGAQLQFPHVPHHSRGRPLIF*QDHLRE Trigger: TTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACG...GCCACGGCTGTGGTGCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCGGGTGCTTGATCTTGTaGAGGACAGCAATCTCATTC | + |
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Preference number: 4 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSGCLIL*RTAISF Trigger: GAATGAGATTGCTGTCCTGCACAAGATCAAGCACCC...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGATGGGGGACAGTTCTGTaGCCGGCTCCACGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRWGTVL*PAPRSS Trigger: ACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCA...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCGGCTTGCATGGGTGCTaGAAGGCCTGCTCACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPSRASLAMHLMATSFCVGLHGC*KACSQV Trigger: CACCTGTGAGCAGGCCTTGCAGCACCCATGCAAGCC...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | GAGTTCCACAGGCGGTGGAGAGCACACTGCCCGGGTCCTCCATCTTGGAGAGGCGTACAGCAGATTCTCTaGCTTGAGATCCCGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: EFHRRWRAHCPGPPSWRGVQQIL*LEIPVY Trigger: GTACACCGGGATCTCAAGCCAGAGAATCTGCTGTAC...GCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCCTAATGTCCTCCGCCTaGTTCCACCTGGGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSLMSSA*FHLGPS Trigger: GGAAGGCCCCAGGTGGAAGCAGGCGGAGGACATTAG...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCGGGTGCTGCAAGGCCTaGTCACAGGTGAATCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPSRASLAMHLMATSFCVGCCKA*SQVNLF Trigger: GAAAAGATTCACCTGTGAGCAGGCCTTGCAGCACCC...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | CATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTGCCAGGATCACCTCCACAGCATCCAGCACCTaGAAGATGAGGCGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: HLMATSFCVLLSSARITSTASST*KMRRLA Trigger: CGCCAGCCGCCTCATCTTCCAGGTGCTGGATGCTGT...GGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGAATGGCCACCAGCTTCTaGGTCCTCTTATCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRMATSF*VLLSSA Trigger: GGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCAT...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| 3UTR CAA 72 bp | CCTTCCTTGCCCTCCAGGGCCTCCTTGGCAATGCATTaGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PSLPSRASLAMH*MATSFCVLLSS Trigger: AGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | GTTCAAAGAGTTTGGCATCATTCTCGTCATAGAAGGGAGGGTAACCGCAGAGCAGAGTTCCACAGGCGGTaGAGAGCACACTGCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: VQRVWHHSRHRREGNRRAEFHRR*RAHCPG Trigger: ACCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTC...TGCTCTGCGGTTACCCTCCCTTCTATGACGAGAATGATGCCAAACTCTTTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CCA 90 bp | CTCCTGGCTGGTGCCCAGCTGCAGTTTCCTCATGTGCCGCACCACAGCCGTGGCTCTGTTCAAAGAGTTTaGCATCATTCTCGTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: LLAGAQLQFPHVPHHSRGSVQRV*HHSRHR Trigger: TCTATGACGAGAATGATGCCAAACTCTTTGAACAGA...GCCACGGCTGTGGTGCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGAACAATGCCCAGGTCATaGAGGTATTTCACAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRTMPRS*RYFTAS Trigger: GGATGCTGTGAAATACCTGCATGACCTGGGCATTGT...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCGATCCCGGTGTACAATaGCCAGGTCATGCAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSDPGVQ*PGHAGI Trigger: AATACCTGCATGACCTGGGCATTGTACACCGGGATC...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | CATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTGCCAGGATCACCTCCCAATGTTGGGGTGCTTaGTCTTGTGCAGGACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HLMATSFCVLLSSARITSQCWGA*SCAGQQ Trigger: TTGCTGTCCTGCACAAGATCAAGCACCCCAACATTG...GGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR GCA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCGCTACAATGTTGGGGTaGTTGATCTTGTGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSATMLG*LILCRT Trigger: TGTCCTGCACAAGATCAAGCACCCCAACATTGTAGC...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR TCA 90 bp | GGCGGCTGGCGTCCCGCTCCGTGTAGAAGCCTTTTTCCACAATACGGTCAAAGACAAAGTCGGAGATCATaGTTTTGGAGTCTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GGWRPAPCRSLFPQYGQRQSRRS*FWSLHP Trigger: TGGATGAAGACTCCAAAATCATGATCTCCGACTTTG...TCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGACGCCAGCCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS CCA 90 bp | GCTCCTGCGGCTGCCCCGCCGCGGGGCTGGCTGGGAGGCCCGCGGTaGTTGGCGCCGAGCTGTGGCCGCGGTCCTCACCGCTGCGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: APAAAPPRGWLGGPR*LAPSCGRGPHRCVP Trigger: AGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCAACCACCGCGGGCCTCCCAGCCAGCCCCGCGGCGGGGCAGCCGCAGGAGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000256460.8 ENST00000397277.6 ENST00000411972.1 |
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| CDS CCA 90 bp | CGACCACAGCCAGGGCTCCTGCGGCTGCCCCGCCGCGGGGCTGGCTaGGAGGCCCGCGGTGGTTGGCGCCGAGCTGTGGCCGCGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPQPGLLRLPRRGAG*EARGGWRRAVAAVL Trigger: GAGGACCGCGGCCACAGCTCGGCGCCAACCACCGCGGGCCTCCCAGCCAGCCCCGCGGCGGGGCAGCCGCAGGAGCCCTGGCTGTGGTCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000256460.8 ENST00000397277.6 ENST00000411972.1 |
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| CDS GCA 90 bp | CGCGGTGGTTGGCGCCGAGCTGTGGCCGCGGTCCTCACCGCTGCGTaGCTGGGCCACCCGCCCGCGCTCTTGCTGGAGCTGGGGCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: RGGWRRAVAAVLTAA*LGHPPALLLELGLG Trigger: GCCGAGCCCCAGCTCCAGCAAGAGCGCGGGCGGGTGGCCCAGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCAACCACCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397277.6 ENST00000411972.1 |
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| CDS GCA 90 bp | GGCCCGCGGTGGTTGGCGCCGAGCTGTGGCCGCGGTCCTCACCGCTaGGTGCCTGGGCCACCCGCCCGCGCTCTTGCTGGAGCTGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GPRWLAPSCGRGPHR*VPGPPARALAGAGA Trigger: AGCCCCAGCTCCAGCAAGAGCGCGGGCGGGTGGCCCAGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCAACCACCGCGGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397277.6 ENST00000411972.1 |
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| CDS CCA 90 bp | GTGGTTGGCGCCGAGCTGTGGCCGCGGTCCTCACCGCTGCGTGCCTaGGCCACCCGCCCGCGCTCTTGCTGGAGCTGGGGCTCGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VVGAELWPRSSPLRA*ATRPRSCWSWGSAR Trigger: CCGAGCCGAGCCCCAGCTCCAGCAAGAGCGCGGGCGGGTGGCCCAGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCAACCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397277.6 ENST00000411972.1 |
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| CDS GCA 90 bp | TCCACTCCAGCCCGGGTGCACCTTTGTGGACCACCCATGCCCTTCTaGAGAGCCCGCTCCTCACCCCCAGCCACTGGTGTCAGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STPARVHLCGPPMPF*RARSSPPATGVSSS Trigger: GGAGCTGCTGACACCAGTGGCTGGGGGTGAGGAGCGGGCTCTGCAGAAGGGCATGGGTGGTCCACAAAGGTGCACCCGGGCTGGAGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421120.1 ENST00000496534.1 |
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| CDS-3UTR CAA 90 bp | GGGGCAGTGTGGGGGACAGTTCTGTGCCCGGCTCCACGCAGCAGTCTCGACAGCTCCTTGGCAATGCATTaGATGGCCACCAGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: GAVWGTVLCPAPRSSLDSSLAMH*MATSFC Trigger: GCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGA...GCTGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | TTGCCCTCCAGGGCCTCCTTGGCAATGCATTTGATGGCCACCAGCTTCTGCGTCCCCGGGTCCTCCATCTaGGAGAGGCCAAAGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSRASLAMHLMATSFCVPGSSI*ERPKSE Trigger: CTCCGACTTTGGCCTCTCCAAGATGGAGGACCCGGG...GACGCAGAAGCTGGTGGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGATCCAGGGCTACAATGTaGGGGTGCTTGATCTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SGPGLQGPRIPEFHRRWRSRATM*GCLILC Trigger: GCACAAGATCAAGCACCCCAACATTGTAGCCCTGGA...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | TCTGGGCCAGGACTTCAGGGGCCACGTATCCCGGAGTTCCACAGGCGGTGGAGAAGGCCCCCTAGCACTTaGAGAATGAGTCTCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SGPGLQGPRIPEFHRRWRRPPST*RMSLLL Trigger: CAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCT...TCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCCTGAAGTCCTGGCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS GCA 90 bp | CTCAGGTCTGGCCTGGCATCAAGACAAAGAGGCCAAATCAGTCCATaGCCCACCCCACCCAACCTATGCTCTTCTTCAGGCCCTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: LRSGLASRQRGQISP*PTPPNLCSSSGPPT Trigger: GGTGGGAGGGCCTGAAGAAGAGCATAGGTTGGGTGGGGTGGGGCATGGACTGATTTGGCCTCTTTGTCTTGATGCCAGGCCAGACCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496534.1 |
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| CDS GCA 90 bp | GGCAATGCATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTaGCAGGATCACCTCCGAGAAGGCCCCCGTGCCCAGAACATCTCG | + |
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Preference number: 5 (lower is better) Translates to: GNAFDGHQLLRPLIF*QDHLREGPRAQNIS Trigger: CGAGATGTTCTGGGCACGGGGGCCTTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATGCATTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256460.8 |
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| CDS-3UTR CAA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCCCCTCCAGGGCCTCCTaGGCAATGCATTTGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSPSRAS*AMHLMA Trigger: GGCCATCAAATGCATTGCCAAGGAGGCCCTGGAGGG...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS CCA 90 bp | GTACTGCCTGTGTACTCCCCAAGAGCATACCCACTCCCTCAGGTCTaGCCTGGCATCAAGACAAAGAGGCCAAATCAGTCCATGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLPVYSPRAYPLPQV*PGIKTKRPNQSMPH Trigger: GTGGGGCATGGACTGATTTGGCCTCTTTGTCTTGATGCCAGGCCAGACCTGAGGGAGTGGGTATGCTCTTGGGGAGTACACAGGCAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496534.1 |
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| CDS GCA 90 bp | GTTGAGCTGGTAGGATGTAAGCCTGGAGCTAATGGCGATCATCTTTaGCACCACCTGGGGAGAGCGTGCCCAGAACATCTCGGAAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VELVGCKPGANGDHL*HHLGRACPEHLGSR Trigger: ACGACTTCCGAGATGTTCTGGGCACGCTCTCCCCAGGTGGTGGCAAAGATGATCGCCATTAGCTCCAGGCTTACATCCTACCAGCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | GGATCACCTCCGAGAAGGCCCCCTAGCACTTTGAGAATGAGTCTCCTGTTGAGCAGCAGATTCTCTGGCTaGAGATCCCGGTGTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GSPPRRPPSTLRMSLLLSSRFSG*RSRCTM Trigger: CATTGTACACCGGGATCTCAAGCCAGAGAATCTGCT...GCTCAACAGGAGACTCATTCTCAAAGTGCTAGGGGGCCTTCTCGGAGGTGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | CATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTGCCAGGATCACCTCCTTGGGGTGCTTGATCTaGTGCAGGACAGCAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLMATSFCVLLSSARITSLGCLI*CRTAIS Trigger: TGAGATTGCTGTCCTGCACAAGATCAAGCACCCCAA...GGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | GTTCAAAGAGTTTGGCATCATTCTCGTCATAGAAGGGAGGGTAACCGCAGAGCAACCACAGCCGTGGCATaGAAGGCTTGCATGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQRVWHHSRHRREGNRRATTAVA*KACMGA Trigger: AGCACCCATGCAAGCCTTCAATGCCACGGCTGTGGT...TGCTCTGCGGTTACCCTCCCTTCTATGACGAGAATGATGCCAAACTCTTTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | CATTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTGCCAGGATCACCTCCTCGGAGATCATGATTTaGGAGTCTTCATCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLMATSFCVLLSSARITSSEIMI*ESSSRL Trigger: CAGCCTGGATGAAGACTCCAAAATCATGATCTCCGA...GGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS-3UTR CAA 90 bp | GTTCAAAGAGTTTGGCATCATTCTCGTCATAGAAGGGAGGGTAACCGCAGAGCAACAATGTTGGGGTGCTaGATCTTGTGCAGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VQRVWHHSRHRREGNRRATMLGC*ILCRTA Trigger: TGCTGTCCTGCACAAGATCAAGCACCCCAACATTGT...TGCTCTGCGGTTACCCTCCCTTCTATGACGAGAATGATGCCAAACTCTTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS CCA 72 bp | CTGGCTGGGAGGCCCGCGGTGGTTGGCGCCGAGCTGTaGCCGCGGTCCTCACCGCTGCGTGCCTGGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LAGRPAVVGAEL*PRSSPLRAWAT Trigger: GGTGGCCCAGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCAACCACCGCGGGCCTCCCAGCCAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000256460.8 ENST00000397277.6 ENST00000411972.1 |
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| CDS CCA 72 bp | GCCGAGCTGTGGCCGCGGTCCTCACCGCTGCGTGCCTaGGCCACCCGCCCGCGCTCTTGCTGGAGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AELWPRSSPLRA*ATRPRSCWSWG Trigger: GCCCCAGCTCCAGCAAGAGCGCGGGCGGGTGGCCCAGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397277.6 ENST00000411972.1 |
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| CDS GCA 72 bp | TGGCGCCGAGCTGTGGCCGCGGTCCTCACCGCTGCGTaGCTGGGCCACCCGCCCGCGCTCTTGCTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WRRAVAAVLTAA*LGHPPALLLEL Trigger: CAGCTCCAGCAAGAGCGCGGGCGGGTGGCCCAGGCACGCAGCGGTGAGGACCGCGGCCACAGCTCGGCGCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397277.6 ENST00000411972.1 |
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| CDS GCA 72 bp | GCAGCAGTCTCGACAGCAACAGCCAGCTGCCGGCCCTaGATGGGAAGACAGAACAGAGGTGGCCGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAVSTATASCRP*MGRQNRGGRRG Trigger: GCCCCTGCGGCCACCTCTGTTCTGTCTTCCCATGCAGGGCCGGCAGCTGGCTGTTGCTGTCGAGACTGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421120.1 ENST00000496534.1 |
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| CDS GCA 72 bp | TTTGATGGCCACCAGCTTCTGCGTCCTCTTATCTTCTaGCAGGATCACCTCCGAGAAGGCCCCCGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FDGHQLLRPLIF*QDHLREGPRAQ Trigger: CTGGGCACGGGGGCCTTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGCCATCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256460.8 |
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| CDS CAA 72 bp | CCTCATGTGCCGCACCACAGCCGTGGCATTGAAGGCTaGCTGGCATTGAAGGCATTGAAGGGAGAGGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PHVPHHSRGIEG*LALKALKGEGR Trigger: TCTCCCCTCTCCCTTCAATGCCTTCAATGCCAGCAAGCCTTCAATGCCACGGCTGTGGTGCGGCACATGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482803.1 |
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| CDS GCA 72 bp | GGCCTGGCATCAAGACAAAGAGGCCAAATCAGTCCATaGCCCACCCCACCCAACCTATGCTCTTCTTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLASRQRGQISP*PTPPNLCSSSG Trigger: GCCTGAAGAAGAGCATAGGTTGGGTGGGGTGGGGCATGGACTGATTTGGCCTCTTTGTCTTGATGCCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496534.1 |
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| CDS CCA 72 bp | AGCCTGGAGCTAATGGCGATCATCTTTGCCACCACCTaGGGAGAGCGTGCCCAGAACATCTCGGAAGTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLELMAIIFATT*GERAQNISEVV Trigger: TACGACTTCCGAGATGTTCTGGGCACGCTCTCCCCAGGTGGTGGCAAAGATGATCGCCATTAGCTCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS CCA 72 bp | CTCCCCAAGAGCATACCCACTCCCTCAGGTCTGGCCTaGCATCAAGACAAAGAGGCCAAATCAGTCCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPKSIPTPSGLA*HQDKEAKSVHA Trigger: GGCATGGACTGATTTGGCCTCTTTGTCTTGATGCCAGGCCAGACCTGAGGGAGTGGGTATGCTCTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496534.1 |
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| CDS GCA 72 bp | GTAGGATGTAAGCCTGGAGCTAATGGCGATCATCTTTaGCACCACCTGGGGAGAGCGTGCCCAGAACATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VGCKPGANGDHL*HHLGRACPEHL Trigger: GAGATGTTCTGGGCACGCTCTCCCCAGGTGGTGGCAAAGATGATCGCCATTAGCTCCAGGCTTACATCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397277.6 |
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| CDS CCA 72 bp | GTGTACTCCCCAAGAGCATACCCACTCCCTCAGGTCTaGCCTGGCATCAAGACAAAGAGGCCAAATCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VYSPRAYPLPQV*PGIKTKRPNQS Trigger: GGACTGATTTGGCCTCTTTGTCTTGATGCCAGGCCAGACCTGAGGGAGTGGGTATGCTCTTGGGGAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496534.1 |
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