Pregenerated sensors for CALR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000269058Ensembl transcript IDs: ENST00000269881.8, ENST00000600762.1, ENST00000602234.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGTTTCAGGCCATCCTGGTACGGGGGCTTCTGGAGCATCGGCGCTaGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: WFQAILVRGLLEHRR*PVPIQVTVPVALLA Trigger: AGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGCCGATGCTCCAGAAGCCCCCGTACCAGGATGGCCTGAAACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS GCA 90 bp | GCGCTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTaGTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: ALASPHPGHRSSRSA*WCWRPENASPSPGL Trigger: AAGCCCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 90 bp | ATCGGCGCTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTaGTTGCTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: IGAGQSPSRSPFQSL*LLVLASRKCFSQSW Trigger: CCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGCCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 90 bp | ATCGGCGCTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTaGTTGCTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: IGAGQSPSRSPFQSL*LLVLASRKCFSQSF Trigger: GAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGCCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS GCA 90 bp | GCGCTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTaGTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: ALASPHPGHRSSRSA*WCWRPENASPSPSD Trigger: ATCTGAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CCA 90 bp | CTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCTaGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTGGGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LASPHPGHRSSRSAC*CWRPENASPSPGLC Trigger: ACAAAGCCCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 90 bp | GCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCTGGTaGTGGCGTCCAGAAAATGCTTCTCCCAGTCCTGGGCTTTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: ASPHPGHRSSRSACW*WRPENASPSPGLCC Trigger: ACAACAAAGCCCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 90 bp | CCTCCTCTTCCTCGCGGGCCTTCTTCATTTCCTCCTTGGCCTGTATaGCATCCATCTCCCTTTCTGGACCCTTGGTTTCGCCCCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: PPLPRGPSSFPPWPV*HPSPFLDPWFRPRW Trigger: CCACCTGGGGCGAAACCAAGGGTCCAGAAAGGGAGATGGATGCCATACAGGCCAAGGAGGAAATGAAGAAGGCCCGCGAGGAAGAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 90 bp | CTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCTaGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTTCAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: LASPHPGHRSSRSAC*CWRPENASPSPSDV Trigger: CACATCTGAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS GCA 90 bp | TCCCAGTCCTTCAGATGTGTAGAGATGTGGCTGGTCTGCAGTGTGTaGTCTGGGGAGGGCATTTGGTTCTATAATATTGCCATCGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SQSFRCVEMWLVCSV*SGEGIWFYNIAIVA Trigger: AGCCACGATGGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACACTGCAGACCAGCCACATCTCTACACATCTGAAGGACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CCA 90 bp | GTAGAGATGTGGCTGGTCTGCAGTGTGTGCTCTGGGGAGGGCATTTaGTTCTATAATATTGCCATCGTGGCTACCAGCCATGCAGCAATT | + |
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Preference number: 5 (lower is better) Translates to: VEMWLVCSVCSGEGI*FYNIAIVATSHAAI Trigger: AATTGCTGCATGGCTGGTAGCCACGATGGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACACTGCAGACCAGCCACATCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS GCA 90 bp | CCCGACGAAAGTCTAAAATGCCCAAATCGGGAGTCATTGGTGGACTaGAACCATCGGTTTCTCCAATGCTCTCCGTCTAGAAATTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PDESLKCPNRESLVD*NHRFLQCSPSRNSS Trigger: AGAGGAATTTCTAGACGGAGAGCATTGGAGAAACCGATGGTTGCAGTCCACCAATGACTCCCGATTTGGGCATTTTAGACTTTCGTCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000600762.1 |
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| CDS GCA 90 bp | AAATGCTTCTCCCAGTCCTTCAGATGTGTAGAGATGTGGCTGGTCTaGAGTGTGTGCTCTGGGGAGGGCATTTGGTTCTATAATATTGCC | + |
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Preference number: 5 (lower is better) Translates to: KCFSQSFRCVEMWLV*SVCSGEGIWFYNIA Trigger: GGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACACTGCAGACCAGCCACATCTCTACACATCTGAAGGACTGGGAGAAGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CCA 90 bp | GTGTGTGCTCTGGGGAGGGCATTTGGTTCTATAATATTGCCATCGTaGCTACCAGCCATGCAGCAATTGTCCAGTAACTGGGTACTTACA | + |
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Preference number: 5 (lower is better) Translates to: VCALGRAFGSIILPS*LPAMQQLSSNWVLT Trigger: TGTAAGTACCCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS TCA 90 bp | CACCTGCCAAAGCTCCAGGCCAATGGCACCAATGTTCTCAAATTCTaGGAGGTCATACTGCGTCAAATAGTCGGTATTCTTCATCTTACG | + |
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Preference number: 5 (lower is better) Translates to: HLPKLQANGTNVLKF*EVILRQIVGILHLT Trigger: CGTAAGATGAAGAATACCGACTATTTGACGCAGTATGACCTCTCAGAATTTGAGAACATTGGTGCCATTGGCCTGGAGCTTTGGCAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 90 bp | CTGAATAACCAGAGTTTTCCCTTTATTGCTGAACGGTTTGAAGCGTaGAGAGATGGCATAGAATCGGCCATTCTGAGTGGTTTGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: LNNQSFPFIAERFEA*RDGIESAILSGLQT Trigger: GGTCTGCAAACCACTCAGAATGGCCGATTCTATGCCATCTCTGCACGCTTCAAACCGTTCAGCAATAAAGGGAAAACTCTGGTTATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 90 bp | AATATAGTACTGCGATTTTCCATTCAGGTTCTTCTGGTCAATGTCTaGAGGAAAGACCTTAATGTAGCCCCCTCCACAGTCCATCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NIVLRFSIQVLLVNV*RKDLNVAPSTVHLL Trigger: CAGAAGATGGACTGTGGAGGGGGCTACATTAAGGTCTTTCCTGCAGACATTGACCAGAAGAACCTGAATGGAAAATCGCAGTACTATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 90 bp | ATATTGCCATCGTGGCTACCAGCCATGCAGCAATTGTCCAGTAACTaGGTACTTACAAACTACATTTGTGCACTTTTTAGAGTTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ILPSWLPAMQQLSSN*VLTNYICALFRVAQ Trigger: CTGGGCAACTCTAAAAAGTGCACAAATGTAGTTTGTAAGTACCCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CCA 72 bp | TGCATATGGCCCAGAGCTGGACCAAAGCCCGGGCCATaGGGGTGTGCACTGCGCTTCCGGTCGCCGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: CIWPRAGPKPGP*GCALRFRSPPP Trigger: GGGTGGCGGCGACCGGAAGCGCAGTGCACACCCCCATGGCCCGGGCTTTGGTCCAGCTCTGGGCCATATGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 72 bp | GCCAGCGCCACTCGCAGCATGCATATGGCCCAGAGCTaGACCAAAGCCCGGGCCATGGGGGTGTGCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: ASATRSMHMAQS*TKARAMGVCTA Trigger: CGCAGTGCACACCCCCATGGCCCGGGCTTTGGTCCAGCTCTGGGCCATATGCATGCTGCGAGTGGCGCTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 72 bp | CCTTCTGGTTTCAGGCCATCCTGGTACGGGGGCTTCTaGAGCATCGGCGCTGGCCAGTCCCCATCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSGFRPSWYGGF*SIGAGQSPSRS Trigger: TGACCTGGATGGGGACTGGCCAGCGCCGATGCTCCAGAAGCCCCCGTACCAGGATGGCCTGAAACCAGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS CAA 90 bp | GGCGCTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTaGCTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GAGQSPSRSPFQSLC*LVLASRKCFSQSWA Trigger: AGCCCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CAA 90 bp | GGCGCTGGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTaGCTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GAGQSPSRSPFQSLC*LVLASRKCFSQSFR Trigger: TCTGAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCCAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS GCA 72 bp | GGCCAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTaGTTGCTGGTGCTGGCGTCCAGAAAATGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GQSPSRSPFQSL*LLVLASRKCFS Trigger: GGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS GCA 72 bp | CATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCTGGTaGTGGCGTCCAGAAAATGCTTCTCCCAGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HPGHRSSRSACW*WRPENASPSPG Trigger: CCCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 72 bp | CCAGGTCACCGTTCCAGTCGCTCTGCTTGCTGGTGCTaGCGTCCAGAAAATGCTTCTCCCAGTCCTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PGHRSSRSACWC*RPENASPSPGL Trigger: AAGCCCAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS CCA 72 bp | CCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCTaGTGCTGGCGTCCAGAAAATGCTTCTCCCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PHPGHRSSRSAC*CWRPENASPSP Trigger: AGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS CAA 72 bp | CAGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTaGCTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QSPSRSPFQSLC*LVLASRKCFSQ Trigger: CTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS GCA 72 bp | AGTCCCCATCCAGGTCACCGTTCCAGTCGCTCTGCTTaGTGGTGCTGGCGTCCAGAAAATGCTTCTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPHPGHRSSRSA*WCWRPENASPS Trigger: ACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATGGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS GCA 72 bp | CATCCAGGTCACCGTTCCAGTCGCTCTGCTTGCTGGTaGTGGCGTCCAGAAAATGCTTCTCCCAGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HPGHRSSRSACW*WRPENASPSPS Trigger: TGAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CCA 72 bp | CCAGGTCACCGTTCCAGTCGCTCTGCTTGCTGGTGCTaGCGTCCAGAAAATGCTTCTCCCAGTCCTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PGHRSSRSACWC*RPENASPSPSD Trigger: ATCTGAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTGGAACGGTGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 72 bp | TCCTCCTCTTCCTCGCGGGCCTTCTTCATTTCCTCCTaGGCCTGTATGGCATCCATCTCCCTTTCTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSRAFFISS*ACMASISLSGP Trigger: GGGTCCAGAAAGGGAGATGGATGCCATACAGGCCAAGGAGGAAATGAAGAAGGCCCGCGAGGAAGAGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 72 bp | CAGTCGCTCTGCTTGCTGGTGCTGGCGTCCAGAAAATaGTTCTCCCAGTCCTTCAGATGTGTAGAGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSLCLLVLASRK*FSQSFRCVEMW Trigger: CCACATCTCTACACATCTGAAGGACTGGGAGAAGCATTTTCTGGACGCCAGCACCAGCAAGCAGAGCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 90 bp | TGGTCTGCAGTGTGTGCTCTGGGGAGGGCATTTGGTTCTATAATATaGCCATCGTGGCTACCAGCCATGCAGCAATTGTCCAGTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: WSAVCALGRAFGSII*PSWLPAMQQLSSNW Trigger: CCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACACTGCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 72 bp | GTGTGTGCTCTGGGGAGGGCATTTGGTTCTATAATATaGCCATCGTGGCTACCAGCCATGCAGCAATTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VCALGRAFGSII*PSWLPAMQQLS Trigger: GGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS TCA 72 bp | CCCAATCCTTCGATTCTGCCGGGGACGTTTCCTTCTTaGGTGATGTTAAGTTCCAGTCGTACTCTATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PNPSILPGTFPS*VMLSSSRTLCC Trigger: GCAGCATAGAGTACGACTGGAACTTAACATCACTCAAGAAGGAAACGTCCCCGGCAGAATCGAAGGATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS CCA 72 bp | CTGGGGAGGGCATTTGGTTCTATAATATTGCCATCGTaGCTACCAGCCATGCAGCAATTGTCCAGTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LGRAFGSIILPS*LPAMQQLSSNW Trigger: CCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATATTATAGAACCAAATGCCCTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 72 bp | CCCGACGAAAGTCTAAAATGCCCAAATCGGGAGTCATaGGTGGACTGCAACCATCGGTTTCTCCAATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PDESLKCPNRES*VDCNHRFLQCS Trigger: AGAGCATTGGAGAAACCGATGGTTGCAGTCCACCAATGACTCCCGATTTGGGCATTTTAGACTTTCGTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000600762.1 |
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| CDS TCA 72 bp | GTATTCTTCATCTTACGGTGGAGCCAGACGTCTTTATaGATACCTTCTGGTTTCAGGCCATCCTGGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: VFFILRWSQTSL*IPSGFRPSWYG Trigger: CCCGTACCAGGATGGCCTGAAACCAGAAGGTATTCATAAAGACGTCTGGCTCCACCGTAAGATGAAGAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS GCA 72 bp | AGTCTAAAATGCCCAAATCGGGAGTCATTGGTGGACTaGAACCATCGGTTTCTCCAATGCTCTCCGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SLKCPNRESLVD*NHRFLQCSPSR Trigger: TCTAGACGGAGAGCATTGGAGAAACCGATGGTTGCAGTCCACCAATGACTCCCGATTTGGGCATTTTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000600762.1 |
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| CDS GCA 72 bp | CTGCGATTTTCCATTCAGGTTCTTCTGGTCAATGTCTaGAGGAAAGACCTTAATGTAGCCCCCTCCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LRFSIQVLLVNV*RKDLNVAPSTV Trigger: GACTGTGGAGGGGGCTACATTAAGGTCTTTCCTGCAGACATTGACCAGAAGAACCTGAATGGAAAATCGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 72 bp | TTCAGATGTGTAGAGATGTGGCTGGTCTGCAGTGTGTaGTCTGGGGAGGGCATTTGGTTCTATAATATTGCC | + |
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Preference number: 6 (lower is better) Translates to: FRCVEMWLVCSV*SGEGIWFYNIA Trigger: GGCAATATTATAGAACCAAATGCCCTCCCCAGAGCACACACTGCAGACCAGCCACATCTCTACACATCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 72 bp | TCCCAATCCTTCGATTCTGCCGGGGACGTTTCCTTCTaGAGTGATGTTAAGTTCCAGTCGTACTCTATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQSFDSAGDVSF*SDVKFQSYSML Trigger: CAGCATAGAGTACGACTGGAACTTAACATCACTCAAGAAGGAAACGTCCCCGGCAGAATCGAAGGATTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS CAA 90 bp | TTAGTCTGTTCCCAATCCTTCGATTCTGCCGGGGACGTTTCCTTCTaGAGTGATGTTAAGTTCCAGTCGTACTCTATGCTGCCGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: LVCSQSFDSAGDVSF*SDVKFQSYSMLPDS Trigger: TGAATCCGGCAGCATAGAGTACGACTGGAACTTAACATCACTCAAGAAGGAAACGTCCCCGGCAGAATCGAAGGATTGGGAACAGACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS GCA 72 bp | CAGAGTTTTCCCTTTATTGCTGAACGGTTTGAAGCGTaGAGAGATGGCATAGAATCGGCCATTCTGAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: QSFPFIAERFEA*RDGIESAILSG Trigger: ACCACTCAGAATGGCCGATTCTATGCCATCTCTGCACGCTTCAAACCGTTCAGCAATAAAGGGAAAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS GCA 72 bp | CTTGGTTTCGCCCCAGGTGGCCTTGCCAAAATTATCTaGGTACTCTTCATCATCTGTGATCAGAAAGTTATC | + |
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Preference number: 6 (lower is better) Translates to: LGFAPGGLAKII*VLFIICDQKVI Trigger: GATAACTTTCTGATCACAGATGATGAAGAGTACGCAGATAATTTTGGCAAGGCCACCTGGGGCGAAACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269881.8 |
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| CDS TCA 72 bp | AAGCTCCAGGCCAATGGCACCAATGTTCTCAAATTCTaGGAGGTCATACTGCGTCAAATAGTCGGTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: KLQANGTNVLKF*EVILRQIVGIL Trigger: AAGAATACCGACTATTTGACGCAGTATGACCTCTCAGAATTTGAGAACATTGGTGCCATTGGCCTGGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269881.8 ENST00000602234.1 |
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| CDS CCA 72 bp | TCGTGGCTACCAGCCATGCAGCAATTGTCCAGTAACTaGGTACTTACAAACTACATTTGTGCACTTTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: SWLPAMQQLSSN*VLTNYICALFR Trigger: TCTAAAAAGTGCACAAATGTAGTTTGTAAGTACCCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 72 bp | ATAATATTGCCATCGTGGCTACCAGCCATGCAGCAATaGTCCAGTAACTGGGTACTTACAAACTACATTTGT | + |
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Preference number: 6 (lower is better) Translates to: IILPSWLPAMQQ*SSNWVLTNYIC Trigger: ACAAATGTAGTTTGTAAGTACCCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 90 bp | CCAGTAACTGGGTACTTACAAACTACATTTGTGCACTTTTTAGAGTaGCCCAGGAAAAATTCACACCTGGGCTTTGTTGTCTTTAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVTGYLQTTFVHFLE*PRKNSHLGFVVFSL Trigger: CAGACTAAAGACAACAAAGCCCAGGTGTGAATTTTTCCTGGGCAACTCTAAAAAGTGCACAAATGTAGTTTGTAAGTACCCAGTTACTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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| CDS CAA 90 bp | TTTGGTTCTATAATATTGCCATCGTGGCTACCAGCCATGCAGCAATaGTCCAGTAACTGGGTACTTACAAACTACATTTGTGCACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FGSIILPSWLPAMQQ*SSNWVLTNYICALF Trigger: AAAAAGTGCACAAATGTAGTTTGTAAGTACCCAGTTACTGGACAATTGCTGCATGGCTGGTAGCCACGATGGCAATATTATAGAACCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602234.1 |
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