Pregenerated sensors for CALR (Homo sapiens)
Ensembl gene IDs: ENSG00000179218Ensembl transcript IDs: ENST00000316448.10, ENST00000586760.2, ENST00000586803.1, ENST00000586967.2, ENST00000587486.6, ENST00000588454.6, ENST00000590325.1, ENST00000680816.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCATTTGTTTCTCTGCTaGCTTTGTTACGCCCCACGT | + |
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Preference number: 2 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSHLFLC*LCYAPR Trigger: ACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCTTCATTTGTTTCTCTaGTGCCTTTGTTACGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSLHLFL*CLCYAP Trigger: TGGGGCGTAACAAAGGCAGCAGAGAAACAAATGAAG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| 3UTR CAA 90 bp | TCCTCCTCATCCTCCTCATCCTCATCTTTGTCCTCATCATCCTCCTaGTCCTCTGCCTCCTCCTCCTCTTTGCGTTTCTTGTCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSSSSSSSSLSSSSS*SSASSSSLRFLSSS Trigger: GGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGAGGACAAGGAGGATGATGAGGACAAAGATGAGGATGAGGAGGATGAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCAGCTCGTCCTTGGCCTaGCCGGGGACATCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSSSSLA*PGTSSS Trigger: GGAGGAAGATGTCCCCGGCCAGGCCAAGGACGAGCT...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTTGGCGCGGCCAGCTCTaGGGCAGGAGCGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVWRGQL*GRSAQA Trigger: GGCCTGAGCGCTCCTGCCGCAGAGCTGGCCGCGCCA...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCGCACGGATAGCAGCATaGCGGGCCGAGGGGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLARIAA*RAEGAA Trigger: TGCCGCCCCCTCGGCCCGCCATGCTGCTATCCGTGC...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCGCTCATGTTTCACCGTaGACTGCACCACCAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSAHVSP*TAPPAS Trigger: AGACGCTGGTGGTGCAGTTCACGGTGAAACATGAGC...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCTGGGTTGTCGATCTaGCGGGGCTTCCACTCACCC | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASSGLSI*RGFHSP Trigger: GGGTGAGTGGAAGCCCCGGCAGATCGACAACCCAGA...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCCTCCAAGTCTCACCTaGCAGAGGTCCAGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHPPSLT*QRSRPS Trigger: GCTGGGCCTGGACCTCTGGCAGGTGAGACTTGGAGG...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCAGACTTGACCTGGGGTaGCTACCCTGTCCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSRLDLG*LPCPFP Trigger: AGGAAAGGGACAGGGTAGGCACCCCAGGTCAAGTCT...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTAGATGGTGCCAGACTTaGCCTGGGGTGCCTACCCTG | + |
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Preference number: 4 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGRWCQT*PGVPTL Trigger: CAGGGTAGGCACCCCAGGTCAAGTCTGGCACCATCT...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATGTGCCAGACTTGACCTaGGGTGCCTACCCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHVPDLT*GAYPVP Trigger: AGGGACAGGGTAGGCACCCCAGGTCAAGTCTGGCAC...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCTGGCCTTTGTTGCTaGAAGGCTCGAAACTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASSGLCC*KARNWP Trigger: CGGCCAGTTTCGAGCCTTTCAGCAACAAAGGCCAGA...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCACATGAACCTTCTTGGTaGCAGGGCCACAGATGTCGG | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASHEPSW*QGHRCR Trigger: CCGACATCTGTGGCCCTGGCACCAAGAAGGTTCATG...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATTCAGGGTCAGGGATATaGTCGGGCTTGTCCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHSGSGI*SGLSQS Trigger: GGACTGGGACAAGCCCGAGCATATCCCTGACCCTGA...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGCCCCACGTCTCGTTaGCAAACTCCTCAGCGTATG | + |
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Preference number: 4 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHRPTSR*QTPQRM Trigger: CATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCG...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATGCACCACCAGCGTCTaGCCTTTGTTGCTGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASCTTSV*PLLLKG Trigger: GCCTTTCAGCAACAAAGGCCAGACGCTGGTGGTGCA...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCGGGGTTGTCAATTTCTaGGTGGATCCAAGTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSGVVNF*VDPSAL Trigger: AAGGGCACTTGGATCCACCCAGAAATTGACAACCCC...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| 3UTR CAA 72 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTaGTCCTCCTCATCCTCCTCATCCTCATCTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSS*SSSSSSSSSLS Trigger: GGACAAAGATGAGGATGAGGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCAGAGCATAAAAGCGTaGATCCTGGCTTGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSQSIKA*ILACLQ Trigger: TTGCAGACAAGCCAGGATGCACGCTTTTATGCTCTG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCTTTATCTTCTTGGGTaGCAGGAAGTCCCAATCGTC | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSLYLLG*QEVPIV Trigger: GACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATGGGATCATCGATCTTaGCCCGCTCATCCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASWDHRS*PAHPSL Trigger: AAGACTGGGATGAGCGGGCCAAGATCGATGATCCCA...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTCAGGCTTGGAGTCTGTaGGATCATCGATCTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGQAWSL*DHRSWP Trigger: GGGCCAAGATCGATGATCCCACAGACTCCAAGCCTG...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATAGTGCCCTTGTAATCTaGGTTGTCGATCTGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHSALVI*VVDLPG Trigger: CCCCGGCAGATCGACAACCCAGATTACAAGGGCACT...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCATAGGCATAGATACTaGGATCGGGAGAATACTCGG | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSHRHRY*DRENTR Trigger: CCGAGTATTCTCCCGATCCCAGTATCTATGCCTATG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCCCAGAAACTGCTCCTTaGAGTAGACGGCAGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLPETAP*SRRQAR Trigger: CCGAGCCTGCCGTCTACTTCAAGGAGCAGTTTCTGG...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCCGTGCATGTCTGTCTaGTCCAAACTATTAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSPCMSV*SKLLGN Trigger: GTTTCCTAATAGTTTGGACCAGACAGACATGCACGG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTTCTACAGCTCGTCCTTaGCCTGGCCGGGGACATCTT | + |
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Preference number: 4 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVSTARP*PGRGHL Trigger: AAGATGTCCCCGGCCAGGCCAAGGACGAGCTGTAGA...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| 3UTR CAA 72 bp | TGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTaGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CFSAAFVTPHVS*PNSSAYASSLV Trigger: CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCTGTTTCACCGTGAACTaGACCACCAGCGTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLCFTVN*TTSVWP Trigger: AGGCCAGACGCTGGTGGTGCAGTTCACGGTGAAACA...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTCCCAGTCCTCAGGCTTaGAGTCTGTGGGATCATCGA | + |
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Preference number: 4 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVPSPQA*SLWDHR Trigger: TCGATGATCCCACAGACTCCAAGCCTGAGGACTGGG...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGGGTTCTGAATCACTaGGGGTTCCCACTCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLRVLNH*GFPLSV Trigger: GACGGAGAGTGGGAACCCCCAGTGATTCAGAACCCT...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCACCAGTCTTCCGGTTTTaGAGCATCAGGATCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASPVFRF*SIRILY Trigger: ATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGG...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATATTCTGAGTCTCCGTaGATGTCTGTCTGGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASYSESP*MSVWSK Trigger: TTTGGACCAGACAGACATGCACGGAGACTCAGAATA...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTCTCATAGGTGTTGTCTaGCCGCACAATCAGTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGLIGVV*PHNQCV Trigger: TACACACTGATTGTGCGGCCAGACAACACCTATGAG...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGCATCCTGGCTTGTCTaGAAACCTTTATCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGASWLV*KPLSFS Trigger: GGAGAAAGATAAAGGTTTGCAGACAAGCCAGGATGC...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTCTGGGTGGATCCAAGTaGCCTTGTAATCTGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVLGGSK*PCNLGC Trigger: ACAACCCAGATTACAAGGGCACTTGGATCCACCCAG...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATCCTTTATCTTCTTaGGTGGCAGGAAGTCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGDPLSS*VAGSPN Trigger: ATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| 3UTR CAA 72 bp | CTTAAGCCTCTGCTCCTCGTCCTGTTTGTCCTTCATTaGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKPLLLVLFVLH*FLCCLCYAPRL Trigger: GAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATGAAGGACAAACAGGACGAGGAGCAGAGGCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCCCCTTTCCTCTTGGGTaGTCTTATGCACTTGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLPFPLG*SYALEV Trigger: TACCTCAAGTGCATAAGATCACCCAAGAGGAAAGGG...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTCCACAGTCGATGTTCTaGTCATGTTTCACCGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVPQSMF*SCFTVN Trigger: GTTCACGGTGAAACATGAGCAGAACATCGACTGTGG...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAAACTCCTCAGCGTATaGCTCATCGTTGGTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLKLLSV*LIVGDE Trigger: CTCATCACCAACGATGAGGCATACGCTGAGGAGTTT...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCAGAATTTGCCAAAATCTaGCTTGTGTTTGGATTCGAT | + |
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Preference number: 4 (lower is better) Translates to: AAFVTPHVSLPNSSAYASEFAKI*LVFGFD Trigger: ATCGAATCCAAACACAAGTCAGATTTTGGCAAATTC...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR GCA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTCTTCATTTGTTTCTCTaGTGCCTTTGTTACGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVLHLFL*CLCYAP Trigger: TGGGGCGTAACAAAGGCAGCAGAGAAACAAATGAAG...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAATCTGACTTGTGTTTaGATTCGATCCAGCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLNLTCV*IRSSGK Trigger: CTTCCCGCTGGATCGAATCCAAACACAAGTCAGATT...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR TCA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGAACTTGCCGGAACTaGGAACGAATTTGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLRTCRN*ERICQN Trigger: ATTTTGGCAAATTCGTTCTCAGTTCCGGCAAGTTCT...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS TCA 90 bp | CCTCGAGGCGGGACCAGGCGTTACCTCCGTCCAGAAACTGCTCCTTaGAGTAGACGGCAGGCTCGGCGACGGCCAGGCCGAGGAGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PRGGTRRYLRPETAP*SRRQARRRPGRGGR Trigger: TCGGCCTCCTCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTTTCTGGACGGAGGTAACGCCTGGTCCCGCCTCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS-3UTR CAA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCGGGATATGCTCGGGCTaGTCCCAGTCCTCAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSGICSG*SQSSGL Trigger: CAAGCCTGAGGACTGGGACAAGCCCGAGCATATCCC...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CCA 90 bp | CTGCCGGGGCTTCCACTCACCCTTGTACTCAGGGTTCTGAATCACTaGGGGTTCCCACTCTCCGTCCATCTCTTCATCCCAGTCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGLPLTLVLRVLNH*GFPLSVHLFIPVLG Trigger: CCCGAGGACTGGGATGAAGAGATGGACGGAGAGTGGGAACCCCCAGTGATTCAGAACCCTGAGTACAAGGGTGAGTGGAAGCCCCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCCAACGGATGTCCTTGTaGATCAGCACGTTCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSQRMSL*ISTFLP Trigger: GGGCAAGAACGTGCTGATCAACAAGGACATCCGTTG...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCAACGCCCCACGTCTCGTaGCCAAACTCCTCAGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: AAFVTPHVSLPNSSAYASTPHVS*PNSSAY Trigger: ATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGT...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCGGTGATCTTATGCACTaGAGGTACCCCAGGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSGDLMH*RYPRDP Trigger: AGGATCCCTGGGGTACCTCAAGTGCATAAGATCACC...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATTCCCAGTCCTCAGGCTaGGAGTCTGTGGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHSQSSG*ESVGSS Trigger: CGATGATCCCACAGACTCCAAGCCTGAGGACTGGGA...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CCA 90 bp | GCTTGTCCCAGTCCTCAGGCTTGGAGTCTGTGGGATCATCGATCTTaGCCCGCTCATCCCAGTCTTCCGGTTTTGAAGCATCAGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ACPSPQAWSLWDHRS*PAHPSLPVLKHQDP Trigger: AGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGATGATCCCACAGACTCCAAGCCTGAGGACTGGGACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CCA 90 bp | CTCGGGGTTGTCAATTTCTGGGTGGATCCAAGTGCCCTTGTAATCTaGGTTGTCGATCTGCCGGGGCTTCCACTCACCCTTGTACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVVNFWVDPSALVI*VVDLPGLPLTLVLR Trigger: CCTGAGTACAAGGGTGAGTGGAAGCCCCGGCAGATCGACAACCCAGATTACAAGGGCACTTGGATCCACCCAGAAATTGACAACCCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCGGACCAAACATGATGTaGTATTCTGAGTCTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSGPNMM*YSESPC Trigger: GCACGGAGACTCAGAATACAACATCATGTTTGGTCC...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | GCCTGGCCGGGGACATCTTCCTCCTCATCTTCCTCCTTGTCCTCCTCATCCTCCTTGCAACGGATGTCCTaGTTGATCAGCACGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWPGTSSSSSSSLSSSSSLQRMS*LISTFL Trigger: CAAGAACGTGCTGATCAACAAGGACATCCGTTGCAA...GGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGAAGATGTCCCCGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATGTTTCTCTGCTGCCTTaGTTACGCCCCACGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHVSLLP*LRPTSR Trigger: ACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAAC...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS GCA 90 bp | GATCGGGAGAATACTCGGGGTTGTCAATTTCTGGGTGGATCCAAGTaGCCTTGTAATCTGGGTTGTCGATCTGCCGGGGCTTCCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DRENTRGCQFLGGSK*PCNLGCRSAGASTH Trigger: GTGAGTGGAAGCCCCGGCAGATCGACAACCCAGATTACAAGGGCACTTGGATCCACCCAGAAATTGACAACCCCGAGTATTCTCCCGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CATTTGTTTCTCTGCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCGTGGGATCATCGATCTaGGCCCGCTCATCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLFLCCLCYAPRLVAKLLVGSSI*ARSSQS Trigger: AGACTGGGATGAGCGGGCCAAGATCGATGATCCCAC...GAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGCAGAGAAACAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
||
| CDS-3UTR CAA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTAAGATGGTGCCAGACTaGACCTGGGGTGCCTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVKMVPD*TWGAYP Trigger: AGGGTAGGCACCCCAGGTCAAGTCTGGCACCATCTT...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS TCA 90 bp | GTGCCAGACTTGACCTGGAGGATGAATGGGAAGGATGGTCAGAGGTaGTACCCGATAGCCCTTGCTTTGGACAGGGTTTCCACCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VPDLTWRMNGKDGQR*YPIALALDRVSTCV Trigger: AACACAGGTGGAAACCCTGTCCAAAGCAAGGGCTATCGGGTATCACCTCTGACCATCCTTCCCATTCATCCTCCAGGTCAAGTCTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATGGAGAATACTCGGGGTaGTCAATTTCTGGGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHGEYSG*SISGWI Trigger: GATCCACCCAGAAATTGACAACCCCGAGTATTCTCC...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
||
| CDS-3UTR CAA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTCCTGTCCCTTTCCTCTaGGGTGATCTTATGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGPVPFL*GDLMHL Trigger: CAAGTGCATAAGATCACCCAAGAGGAAAGGGACAGG...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS TCA 90 bp | TGTGGGATCATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTTaGAGCATCAGGATCCTTTATCTTCTTGGGTGGCAGGAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGIIDLGPLIPVFRF*SIRILYLLGWQEVP Trigger: TGGGACTTCCTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGATGATCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CCA 90 bp | CATCCCAGTCTTCCGGTTTTGAAGCATCAGGATCCTTTATCTTCTTaGGTGGCAGGAAGTCCCAATCGTCTTCCAAGGAGCCGGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPSLPVLKHQDPLSS*VAGSPNRLPRSRTP Trigger: TGGAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CCA 90 bp | GGCATAGATACTGGGATCGGGAGAATACTCGGGGTTGTCAATTTCTaGGTGGATCCAAGTGCCCTTGTAATCTGGGTTGTCGATCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GIDTGIGRILGVVNF*VDPSALVIWVVDLP Trigger: CGGCAGATCGACAACCCAGATTACAAGGGCACTTGGATCCACCCAGAAATTGACAACCCCGAGTATTCTCCCGATCCCAGTATCTATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CCA 90 bp | AGAGGTCCAGGCCCAGCACGCCAAAGTTATCATAGGCATAGATACTaGGATCGGGAGAATACTCGGGGTTGTCAATTTCTGGGTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPGPARQSYHRHRY*DRENTRGCQFLGGS Trigger: GGATCCACCCAGAAATTGACAACCCCGAGTATTCTCCCGATCCCAGTATCTATGCCTATGATAACTTTGGCGTGCTGGGCCTGGACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CCA 90 bp | GTCAAAGATGGTGCCAGACTTGACCTGGAGGATGAATGGGAAGGATaGTCAGAGGTGATACCCGATAGCCCTTGCTTTGGACAGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKDGARLDLEDEWEG*SEVIPDSPCFGQGF Trigger: GAAACCCTGTCCAAAGCAAGGGCTATCGGGTATCACCTCTGACCATCCTTCCCATTCATCCTCCAGGTCAAGTCTGGCACCATCTTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATAGCGTGCATCCTGGCTaGTCTGCAAACCTTTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHSVHPG*SANLYL Trigger: AAGATAAAGGTTTGCAGACAAGCCAGGATGCACGCT...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTAGCGTCTGGCCTTTGTaGCTGAAAGGCTCGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVSVWPL*LKGSKL Trigger: CAGTTTCGAGCCTTTCAGCAACAAAGGCCAGACGCT...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTACCAGCGTCTGGCCTTaGTTGCTGAAAGGCTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVTSVWP*LLKGSK Trigger: TTTCGAGCCTTTCAGCAACAAAGGCCAGACGCTGGT...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | GCTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATGCTCCTCGTCCTGTTaGTCCTTCATTTGTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAFVTPHVSLPNSSAYASCSSSC*SFICFS Trigger: AGAGAAACAAATGAAGGACAAACAGGACGAGGAGCA...TGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS TCA 90 bp | GTCACCGTAGAACTTGCCGGAACTGAGAACGAATTTGCCAAAATCTaGCTTGTGTTTGGATTCGATCCAGCGGGAAGTCCACCCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTVELAGTENEFAKI*LVFGFDPAGSPPVS Trigger: GGAGACGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTCCGGCAAGTTCTACGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | TGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTAAATCTGACTTGTGTTaGGATTCGATCCAGCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CYAPRLVAKLLSVCLIVGKSDLC*DSIQRE Trigger: TTCCCGCTGGATCGAATCCAAACACAAGTCAGATTT...ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS GCA 90 bp | TTGGACAGGGTTTCCACCTGTGTTCCTATAACCACTATATTCTGCTaGCTGCATCTGCAGAGAAGACAAGGAACACCGCTGACACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDRVSTCVPITTIFC*LHLQRRQGTPLTLQ Trigger: CTGCAGTGTCAGCGGTGTTCCTTGTCTTCTCTGCAGATGCAGGCAGCAGAATATAGTGGTTATAGGAACACAGGTGGAAACCCTGTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS GCA 90 bp | GCTTTGGACAGGGTTTCCACCTGTGTTCCTATAACCACTATATTCTaGTGCCTGCATCTGCAGAGAAGACAAGGAACACCGCTGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ALDRVSTCVPITTIF*CLHLQRRQGTPLTL Trigger: CAGTGTCAGCGGTGTTCCTTGTCTTCTCTGCAGATGCAGGCAGCAGAATATAGTGGTTATAGGAACACAGGTGGAAACCCTGTCCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATTTGCCAAAATCTGACTaGTGTTTGGATTCGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHLPKSD*CLDSIQ Trigger: CTGGATCGAATCCAAACACAAGTCAGATTTTGGCAA...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTCCCAGTCTTCCGGTTTaGAAGCATCAGGATCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVPSLPV*KHQDPL Trigger: TAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGG...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTGTTACGCCCCACGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCTGTTTGTCCTTCATTaGTTTCTCTGCTGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRPTSRCQTPQRMPHLFVLH*FLCCLC Trigger: ACAAAGGCAGCAGAGAAACAAATGAAGGACAAACAG...ATGAGGCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS GCA 90 bp | TTTGTTGCTGAAAGGCTCGAAACTGGCCGACAGAGCATAAAAGCGTaGATCCTGGCTTGTCTGCAAACCTTTATCTTTCTCCTCGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FVAERLETGRQSIKA*ILACLQTFIFLLVT Trigger: GGTGACGAGGAGAAAGATAAAGGTTTGCAGACAAGCCAGGATGCACGCTTTTATGCTCTGTCGGCCAGTTTCGAGCCTTTCAGCAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS-3UTR CAA 90 bp | CGTCTCGTTGCCAAACTCCTCAGCGTATGCCTCATCGTTGGTGATGAGGAAGTTGTAAACTCATCATCCTaGCAACGGATGTCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVAKLLSVCLIVGDEEVVNSSS*QRMSLL Trigger: CAACAAGGACATCCGTTGCAAGGATGATGAGTTTAC...AACTTCCTCATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS GCA 90 bp | GAGGATGAATGGGAAGGATGGTCAGAGGTGATACCCGATAGCCCTTaGTTTGGACAGGGTTTCCACCTGTGTTCCTATAACCACTATATT | + |
|
Preference number: 5 (lower is better) Translates to: EDEWEGWSEVIPDSP*FGQGFHLCSYNHYI Trigger: AATATAGTGGTTATAGGAACACAGGTGGAAACCCTGTCCAAAGCAAGGGCTATCGGGTATCACCTCTGACCATCCTTCCCATTCATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS GCA 72 bp | CGCGGGCCCTTTAAAACGACCCTCCGGCAGCGGCTCTaGAGTACGGACGGACGCCGCCGCCCGCCTTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RGPFKTTLRQRL*STDGRRRPPCT Trigger: AGTGCAAGGCGGGCGGCGGCGTCCGTCCGTACTGCAGAGCCGCTGCCGGAGGGTCGTTTTAAAGGGCCCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS TCA 72 bp | GGGAAGTCCACCCGTCTCCGTCCAGAAACTGCTCCTTaGAGTAGACGGCAGGCTCGGCGACGGCCAGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GKSTRLRPETAP*SRRQARRRPGR Trigger: TCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTTTCTGGACGGAGACGGGTGGACTTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS TCA 72 bp | GGGACCAGGCGTTACCTCCGTCCAGAAACTGCTCCTTaGAGTAGACGGCAGGCTCGGCGACGGCCAGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GTRRYLRPETAP*SRRQARRRPGR Trigger: TCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTTTCTGGACGGAGGTAACGCCTGGTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS CCA 72 bp | GCTCGGGCTTGTCCCAGTCCTCAGGCTTGGAGTCTGTaGGATCATCGATCTTGGCCCGCTCATCCCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ARACPSPQAWSL*DHRSWPAHPSL Trigger: AAGACTGGGATGAGCGGGCCAAGATCGATGATCCCACAGACTCCAAGCCTGAGGACTGGGACAAGCCCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS TCA 72 bp | TGCCGGGGCTTCCACTCACCCTTGTACTCAGGGTTCTaGATCACTGGGGGTTCCCACTCTCCGTCCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRGFHSPLYSGF*ITGGSHSPSIS Trigger: AGAGATGGACGGAGAGTGGGAACCCCCAGTGATTCAGAACCCTGAGTACAAGGGTGAGTGGAAGCCCCGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS TCA 72 bp | GACCTGGGGTGCCTACCCTGTCCCTTTCCTCTTGGGTaGTCTTATGCACTTGAGGTACCCCAGGGATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DLGCLPCPFPLG*SYALEVPQGSS Trigger: GGAGGATCCCTGGGGTACCTCAAGTGCATAAGATCACCCAAGAGGAAAGGGACAGGGTAGGCACCCCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CCA 72 bp | TTGGATTCGATCCAGCGGGAAGTCCACCCGTCTAAGTaGGGGATTAGAGGGGTAGGTCAGAGCGGCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LDSIQREVHPSK*GIRGVGQSGCA Trigger: AGCACAGCCGCTCTGACCTACCCCTCTAATCCCCCACTTAGACGGGTGGACTTCCCGCTGGATCGAATCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS CAA 90 bp | GGCTTGTCCCAGTCCTCAGGCTTGGAGTCTGTGGGATCATCGATCTaGGCCCGCTCATCCCAGTCTTCCGGTTTTGAAGCATCAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSQSSGLESVGSSI*ARSSQSSGFEASGS Trigger: GGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGATGATCCCACAGACTCCAAGCCTGAGGACTGGGACAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS GCA 72 bp | ACCCCAGGGATCCTCCTTTTTCCTCCAAGTCTCACCTaGCAGAGGTCCAGGCCCAGCACGCCAAAGTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: TPGILLFPPSLT*QRSRPSTPKLS Trigger: TGATAACTTTGGCGTGCTGGGCCTGGACCTCTGGCAGGTGAGACTTGGAGGAAAAAGGAGGATCCCTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CAA 90 bp | GGACAGGAAAGGAGATCCCCGACACTCCCCATTCCAACCTCTAGTTaGACACGTCGGGTGCCTTCAGAGATCCTCGGGCTAACCCTAACT | + |
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Preference number: 6 (lower is better) Translates to: GQERRSPTLPIPTSS*TRRVPSEILGLTLT Trigger: AGTTAGGGTTAGCCCGAGGATCTCTGAAGGCACCCGACGTGTCAAACTAGAGGTTGGAATGGGGAGTGTCGGGGATCTCCTTTCCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS CAA 72 bp | TGTTTCACCGTGAACTGCACCACCAGCGTCTGGCCTTaGTTGCTGAAAGGCTCGAAACTGGCCGACAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: CFTVNCTTSVWP*LLKGSKLADRA Trigger: TGCTCTGTCGGCCAGTTTCGAGCCTTTCAGCAACAAAGGCCAGACGCTGGTGGTGCAGTTCACGGTGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS CAA 72 bp | GACTTGACCTGGGGTGCCTACCCTGTCCCTTTCCTCTaGGGTGATCTTATGCACTTGAGGTACCCCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: DLTWGAYPVPFL*GDLMHLRYPRD Trigger: ATCCCTGGGGTACCTCAAGTGCATAAGATCACCCAAGAGGAAAGGGACAGGGTAGGCACCCCAGGTCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CAA 90 bp | ATGGTGCCAGACTTGACCTGGGGTGCCTACCCTGTCCCTTTCCTCTaGGGTGATCTTATGCACTTGAGGTACCCCAGGGATCCTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: MVPDLTWGAYPVPFL*GDLMHLRYPRDPPF Trigger: AAAAGGAGGATCCCTGGGGTACCTCAAGTGCATAAGATCACCCAAGAGGAAAGGGACAGGGTAGGCACCCCAGGTCAAGTCTGGCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CCA 72 bp | CTTCCACTCACCCTTGTACTCAGGGTTCTGAATCACTaGGGGTTCCCACTCTCCGTCCATCTCTTCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: LPLTLVLRVLNH*GFPLSVHLFIP Trigger: TGGGATGAAGAGATGGACGGAGAGTGGGAACCCCCAGTGATTCAGAACCCTGAGTACAAGGGTGAGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CCA 72 bp | GGTGCCAGACTTGACCTGGAGGATGAATGGGAAGGATaGTCAGAGGTGATACCCGATAGCCCTTGCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GARLDLEDEWEG*SEVIPDSPCFG Trigger: TCCAAAGCAAGGGCTATCGGGTATCACCTCTGACCATCCTTCCCATTCATCCTCCAGGTCAAGTCTGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS CAA 90 bp | CTGTGGGATCATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTaGAAGCATCAGGATCCTTTATCTTCTTGGGTGGCAGGAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LWDHRSWPAHPSLPV*KHQDPLSSWVAGSP Trigger: GGGACTTCCTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGATGATCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS TCA 72 bp | TTGACCTGGAGGATGAATGGGAAGGATGGTCAGAGGTaGTACCCGATAGCCCTTGCTTTGGACAGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LTWRMNGKDGQR*YPIALALDRVS Trigger: GGAAACCCTGTCCAAAGCAAGGGCTATCGGGTATCACCTCTGACCATCCTTCCCATTCATCCTCCAGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS GCA 72 bp | AATACTCGGGGTTGTCAATTTCTGGGTGGATCCAAGTaGCCTTGTAATCTGGGTTGTCGATCTGCCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: NTRGCQFLGGSK*PCNLGCRSAGA Trigger: AGCCCCGGCAGATCGACAACCCAGATTACAAGGGCACTTGGATCCACCCAGAAATTGACAACCCCGAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS TCA 72 bp | ATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTTaGAGCATCAGGATCCTTTATCTTCTTGGGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: IDLGPLIPVFRF*SIRILYLLGWQ Trigger: CTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS GCA 72 bp | TGGGAAGGATGGTCAGAGGTGATACCCGATAGCCCTTaGTTTGGACAGGGTTTCCACCTGTGTTCCTATAAC | + |
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Preference number: 6 (lower is better) Translates to: WEGWSEVIPDSP*FGQGFHLCSYN Trigger: GTTATAGGAACACAGGTGGAAACCCTGTCCAAAGCAAGGGCTATCGGGTATCACCTCTGACCATCCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS CAA 72 bp | CATCGATCTTGGCCCGCTCATCCCAGTCTTCCGGTTTaGAAGCATCAGGATCCTTTATCTTCTTGGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HRSWPAHPSLPV*KHQDPLSSWVA Trigger: TGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGCCAAGATCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CAA 72 bp | TACCCTGTCCCTTTCCTCTTGGGTGATCTTATGCACTaGAGGTACCCCAGGGATCCTCCTTTTTCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: YPVPFLLGDLMH*RYPRDPPFSSK Trigger: CTTGGAGGAAAAAGGAGGATCCCTGGGGTACCTCAAGTGCATAAGATCACCCAAGAGGAAAGGGACAGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000680816.1 |
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| CDS CAA 90 bp | AACTTGCCGGAACTGAGAACGAATTTGCCAAAATCTGACTTGTGTTaGGATTCGATCCAGCGGGAAGTCCACCCGTCTCCGTCCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: NLPELRTNLPKSDLC*DSIQREVHPSPSRN Trigger: GTTTCTGGACGGAGACGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTCCGGCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS CCA 72 bp | GGCCCAGCACGCCAAAGTTATCATAGGCATAGATACTaGGATCGGGAGAATACTCGGGGTTGTCAATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPARQSYHRHRY*DRENTRGCQFL Trigger: CAGAAATTGACAACCCCGAGTATTCTCCCGATCCCAGTATCTATGCCTATGATAACTTTGGCGTGCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000680816.1 |
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| CDS CAA 72 bp | GAACTGAGAACGAATTTGCCAAAATCTGACTTGTGTTaGGATTCGATCCAGCGGGAAGTCCACCCGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ELRTNLPKSDLC*DSIQREVHPSP Trigger: CGGAGACGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS CAA 72 bp | TTGCCGGAACTGAGAACGAATTTGCCAAAATCTGACTaGTGTTTGGATTCGATCCAGCGGGAAGTCCACCCG | + |
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Preference number: 6 (lower is better) Translates to: LPELRTNLPKSD*CLDSIQREVHP Trigger: CGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTCCGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS CAA 90 bp | AACTTGCCGGAACTGAGAACGAATTTGCCAAAATCTGACTTGTGTTaGGATTCGATCCAGCGGGAAGTCCACCCGTCTAAGTGGGGGATT | + |
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Preference number: 6 (lower is better) Translates to: NLPELRTNLPKSDLC*DSIQREVHPSKWGI Trigger: AATCCCCCACTTAGACGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTCCGGCAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS GCA 72 bp | GAAAGGCTCGAAACTGGCCGACAGAGCATAAAAGCGTaGATCCTGGCTTGTCTGCAAACCTTTATCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ERLETGRQSIKA*ILACLQTFIFL Trigger: GAGAAAGATAAAGGTTTGCAGACAAGCCAGGATGCACGCTTTTATGCTCTGTCGGCCAGTTTCGAGCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS GCA 72 bp | AGGGTTTCCACCTGTGTTCCTATAACCACTATATTCTaGTGCCTGCATCTGCAGAGAAGACAAGGAACACCG | + |
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Preference number: 6 (lower is better) Translates to: RVSTCVPITTIF*CLHLQRRQGTP Trigger: CGGTGTTCCTTGTCTTCTCTGCAGATGCAGGCAGCAGAATATAGTGGTTATAGGAACACAGGTGGAAACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586803.1 |
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| CDS TCA 72 bp | GAACTTGCCGGAACTGAGAACGAATTTGCCAAAATCTaGCTTGTGTTTGGATTCGATCCAGCGGGAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ELAGTENEFAKI*LVFGFDPAGSP Trigger: TGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTCCGGCAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS TCA 72 bp | GCCACAGATGTCGGGACCAAACATGATGTTGTATTCTaGGTCTCCGTGCATGTCTGTCTGGTCCAAACTATT | + |
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Preference number: 6 (lower is better) Translates to: ATDVGTKHDVVF*VSVHVCLVQTI Trigger: AATAGTTTGGACCAGACAGACATGCACGGAGACTCAGAATACAACATCATGTTTGGTCCCGACATCTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS CAA 72 bp | GAACTGAGAACGAATTTGCCAAAATCTGACTTGTGTTaGGATTCGATCCAGCGGGAAGTCCACCCGTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: ELRTNLPKSDLC*DSIQREVHPSK Trigger: CTTAGACGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587486.6 |
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| CDS GCA 72 bp | TCGGGACCAAACATGATGTTGTATTCTGAGTCTCCGTaGATGTCTGTCTGGTCCAAACTATTAGGAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: SGPNMMLYSESP*MSVWSKLLGNS Trigger: GCTGTTTCCTAATAGTTTGGACCAGACAGACATGCACGGAGACTCAGAATACAACATCATGTTTGGTCCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000590325.1 ENST00000680816.1 |
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| CDS TCA 72 bp | TATCTTTCTCCTCGTCACCGTAGAACTTGCCGGAACTaGGAACGAATTTGCCAAAATCTGACTTGTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: YLSPRHRRTCRN*ERICQNLTCVW Trigger: CCAAACACAAGTCAGATTTTGGCAAATTCGTTCTCAGTTCCGGCAAGTTCTACGGTGACGAGGAGAAAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000316448.10 ENST00000586760.2 ENST00000586967.2 ENST00000587486.6 ENST00000588454.6 ENST00000590325.1 ENST00000680816.1 |
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