RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183166

Ensembl transcript IDs: ENST00000329008.9, ENST00000395275.7, ENST00000395276.6, ENST00000405452.3, ENST00000431984.5, ENST00000446128.1

Found 1641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGCAGCAGGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTTaGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: QAAGQVRGKGRLLPP*SGLAGLNSRKFCRG
Trigger: CCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCCTGCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TCATCCGGCATAGAGACGTGGTGGGTCTCCATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCTCACCGCCAGTCCCAGTCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: SSGIETWWVSMTPDG*VWVSKPHRQSQSPP
Trigger: GGGAGGGGACTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GACCACACGTGGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCTGTCCATGCCCTCATAGGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: DHTWPGQPKPGSCPG*LHPSFSVHALIGPQ
Trigger: CTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AAGGTCATCCGGCATAGAGACGTGGTGGGTCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAAACCTCACCGCCAGTCCCAGTCCCC +
Preference number: 1 (lower is better)
Translates to: KVIRHRDVVGLHDSR*LGVGIKTSPPVPVP
Trigger: GGGGACTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp TGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGAGCTTACATCTGCTCCCTCCTCCAT +
Preference number: 1 (lower is better)
Translates to: WPCWAELQEVLQRDL*SPRLLGAYICSLLH
Trigger: ATGGAGGAGGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AAGGAAGGAGAGCAAGGACACAGTAAACACAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: KEGEQGHSKHRSQDM*PHVARPAQTRELSW
Trigger: CCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGTGTCCTTGCTCTCCTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CACAGGCGGCAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGAC +
Preference number: 1 (lower is better)
Translates to: HRRQSWEKGSLQVPK*WCGMGSRNRKPSAD
Trigger: GTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTGCCGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CTGCCTCCTTGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCCCCAGGCTCTTGGGAGCTTACATCT +
Preference number: 1 (lower is better)
Translates to: LPPWSGLAGLNSRKF*RGTCDPPGSWELTS
Trigger: AGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AGGCGGCAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGACGGA +
Preference number: 1 (lower is better)
Translates to: RRQSWEKGSLQVPKC*CGMGSRNRKPSADG
Trigger: TCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GGGGTGAGCTATTCCCTCTCAATTCCTGCGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTTGGGCATGGGAGACCAGGACCTTCT +
Preference number: 1 (lower is better)
Translates to: GVSYSLSIPAEVTSS*GYMASLGHGRPGPS
Trigger: AGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCCGCAGGAATTGAGAGGGAATAGCTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AGCAAGGACACAGTAAACACAGATCCCAGGACATGTGACCACACGTaGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTGGTTGCAT +
Preference number: 1 (lower is better)
Translates to: SKDTVNTDPRTCDHT*PGQPKPGSCPGWLH
Trigger: ATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGTGTCCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CGGCAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATGCTGGTaGGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGACGGAAAC +
Preference number: 1 (lower is better)
Translates to: RQSWEKGSLQVPKCW*GMGSRNRKPSADGN
Trigger: GTTTCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TGGCGAGCTACCAGCCTGCTCTTGAAATGCACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCAT +
Preference number: 1 (lower is better)
Translates to: WRATSLLLKCTEPFV*IRLMGSPMALNGLH
Trigger: ATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGTGCATTTCAAGAGCAGGCTGGTAGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AAAGCCCCCTCTTCTGTGGCAACCCTGAAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTGGGTTG +
Preference number: 1 (lower is better)
Translates to: KAPSSVATLKSASWN*GLTSAESLLLTLGL
Trigger: CAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAGAGGGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp TGCGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACCAATGGCAGTCCTCTAGAAAAGGCA +
Preference number: 1 (lower is better)
Translates to: CGMGSRNRKPSADGN*EHPSSTNGSPLEKA
Trigger: TGCCTTTTCTAGAGGACTGCCATTGGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CAGCCAAGGTCACTGGTTCCTAAGTCCGGAGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTCCTGCGGAAGTCACTTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: QPRSLVPKSGGQNEG*AIPSQFLRKSLPAG
Trigger: CCCAGCTGGAAGTGACTTCCGCAGGAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGACCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GCCTTTCGTGTGGATCAGACTGATGGGCAGCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCT +
Preference number: 1 (lower is better)
Translates to: AFRVDQTDGQPHGTQ*PACFQSRPAIQRRP
Trigger: AGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATCCACACGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp AGGTCACTGGGAGCAAGAAGAAGGTCACCGTTAGGAAAGGAATCCTaGAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTC +
Preference number: 1 (lower is better)
Translates to: RSLGARRRSPLGKES*SLSRKQDGGASPEL
Trigger: GAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTCCTTTCCTAACGGTGACCTTCTTCTTGCTCCCAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GTCACCGTTAGGAAAGGAATCCTGCAGCCTTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACTCCTTTTCCTCCCTACTCCTGCACA +
Preference number: 1 (lower is better)
Translates to: VTVRKGILQPFQKTG*RRLSRTPFPPYSCT
Trigger: TGTGCAGGAGTAGGGAGGAAAAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTCCTTTCCTAACGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ATTCCCTCTCAATTCCTGCGGAAGTCACTTCCAGCTGGGGCTACATaGCATCCCTTGGGCATGGGAGACCAGGACCTTCTGGAATCTTCA +
Preference number: 1 (lower is better)
Translates to: IPSQFLRKSLPAGAT*HPLGMGDQDLLESS
Trigger: TGAAGATTCCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCCGCAGGAATTGAGAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp GAGAGAGTTGAGAGCCACTGGCTTGTGCAACTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCCAATCTAGGTCTTTCCCAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: ERVESHWLVQLSTRS*QDPFLANLGLSQGE
Trigger: TTCTCCCTGGGAAAGACCTAGATTGGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AACTCCAGGAAGTTTTGCAGAGGGACCTGTGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCCTCCTCCATATTATGGCTGAAGCCT +
Preference number: 1 (lower is better)
Translates to: NSRKFCRGTCDPPGS*ELTSAPSSILWLKP
Trigger: AGGCTTCAGCCATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GGCGGCGCCTCTCCAGAACTCCTTTTCCTCCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATGAAATCTAACCCTCACCTCTTGAAG +
Preference number: 1 (lower is better)
Translates to: GGASPELLFLPTPAQ*LISLPMKSNPHLLK
Trigger: CTTCAAGAGGTGAGGGTTAGATTTCATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAAAGGAGTTCTGGAGAGGCGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TTTGTCAATCACTCAGCCTCCACACAGTTGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGACAGAATGAGGGGTGAGCTATTCCCT +
Preference number: 1 (lower is better)
Translates to: FVNHSASTQLGSQGH*FLSPEDRMRGELFP
Trigger: AGGGAATAGCTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTGAGTGATTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp ACCCTTGGGTTGAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCATaGCTCTCTCTTGCTCTCTCACCATTATACCTGGATGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: TLGLKEWGVEVTVCS*LSLALSPLYLDGCW
Trigger: CCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAACACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp ACCAGGGAGCTGTCCTGGGTGGTTGCATCCTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGGAAACTGCTAGATTTAGGTGAAGAG +
Preference number: 1 (lower is better)
Translates to: TRELSWVVASFIFCP*PHRASGKLLDLGEE
Trigger: CTCTTCACCTAAATCTAGCAGTTTCCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TTGGAACTGAGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTaGGTTGAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCATGCCT +
Preference number: 1 (lower is better)
Translates to: LELRVDLSRESPVDP*VERMGSGGDCVFMP
Trigger: AGGCATGAACACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp GTTCGGGGGTCAGGGAAAAACAGGAAAGTATATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAGTCCAGATGGGAGAGGGCAAACTGC +
Preference number: 1 (lower is better)
Translates to: VRGSGKNRKVYPFKI*YALPSKSRWERANC
Trigger: GCAGTTTGCCCTCTCCCATCTGGACTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATATACTTTCCTGTTTTTCCCTGACCCCCGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ACATTCTGGAAGCCATTGCTAATAGTCCCGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTGGAAAGGTGGGGCGCAGCTTCTTTG +
Preference number: 1 (lower is better)
Translates to: TFWKPLLIVPMLDSV*GLCGYLERWGAASL
Trigger: CAAAGAAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp ACTAGTTTGAAAGCCAACCCATCACACCTGAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGGGGTTGTGCTCAACTGATGAACTAC +
Preference number: 1 (lower is better)
Translates to: TSLKANPSHLRKRDG*VYARHGGCAQLMNY
Trigger: GTAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGGCTTTCAAACTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp GAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCTGGATGGCTGCTGGAATTCCGAGAT +
Preference number: 1 (lower is better)
Translates to: ERMGSGGDCVFMPLS*SLTIIPGWLLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAACACACAGTCACCTCCACTCCCCATTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ATGCACAAGGACCTTAACTTACAAAGGTCATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCAGATGGCTGGGTGTGGGTATCAAAA +
Preference number: 1 (lower is better)
Translates to: MHKDLNLQRSSGIET*WVSMTPDGWVWVSK
Trigger: TTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGACCTTTGTAAGTTAAGGTCCTTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GTATATCCCTTCAAGATCTGCTATGCCCTCCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCAGGGCAGAGATTAAGGATGAAGTTG +
Preference number: 1 (lower is better)
Translates to: VYPFKICYALPSKSR*ERANCPGQRLRMKL
Trigger: CAACTTCATCCTTAATCTCTGCCCTGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CCAGACAAAAAGGCAGAGATACCACCCAGATTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACAGATGCAGAGAGTCAGGTTGCACTC +
Preference number: 1 (lower is better)
Translates to: PDKKAEIPPRFFKGN*LSQQDTDAESQVAL
Trigger: GAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAATCTGGGTGGTATCTCTGCCTTTTTGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TTTCAGATAGATTCTCCCCTTCTGGGGCAGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGTAAGGCCTTTAGGTTACGGACTCTT +
Preference number: 1 (lower is better)
Translates to: FQIDSPLLGQLSNQV*REDGYGKAFRLRTL
Trigger: AAGAGTCCGTAACCTAAAGGCCTTACCATAGCCATCTTCCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGGAGAATCTATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp ATGGGTCAAAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTTaGTACCTTGCTCAAACAGCCTGCAGAACTGCGAGCCAAATAAAC +
Preference number: 1 (lower is better)
Translates to: MGQSFLRSHQKPSRC*YLAQTACRTASQIN
Trigger: GTTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTTTGACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CTTATTCTGGATATGAGAGCTGCCAAGCTCCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCTTCTATTTACACCCAACATATTGGG +
Preference number: 1 (lower is better)
Translates to: LILDMRAAKLQSSWP*SIPSCASIYTQHIG
Trigger: CCCAATATGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGATCATGGCCAGGACGATTGGAGCTTGGCAGCTCTCATATCCAGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp GATTTGAGGTCTTTTAAGACAGATGTTCTTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACAACCAGGATGTGTGACGTGCTGAAG +
Preference number: 1 (lower is better)
Translates to: DLRSFKTDVLQGLQL*RPPGYTTRMCDVLK
Trigger: CTTCAGCACGTCACACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATCTGTCTTAAAAGACCTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AGCTCTGCAGACCTCCTGGTTATACAACCAGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCTCAGTTCATCTGTACCATCACGGTG +
Preference number: 1 (lower is better)
Translates to: SSADLLVIQPGCVTC*SLKVSSQFICTITV
Trigger: CACCGTGATGGTACAGATGAACTGAGATGAAACTTTTAGACTTCAGCACGTCACACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGTAGGGAGCATTCACTCCATCTTGTT +
Preference number: 1 (lower is better)
Translates to: LVFKKELPVPSAIHG*NPDPLSREHSLHLV
Trigger: AACAAGATGGAGTGAATGCTCCCTACTGAGAGGGTCTGGATTTCACCCATGAATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp AAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTTGATACCTTaGTCAAACAGCCTGCAGAACTGCGAGCCAAATAAACCTCTTTTC +
Preference number: 1 (lower is better)
Translates to: KLSEVSPEAKQMLIP*SNSLQNCEPNKPLF
Trigger: GAAAAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ACAGACAGCGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATTC +
Preference number: 1 (lower is better)
Translates to: TDSGHQKRDFITTAS*DLCSKRSSQFLVQF
Trigger: GAATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AGCATCTCTTCTTGGAATCTGCCATTGTTTCCTCCAACTTTCTCCTaGATTCTGATTCACATGACCTTTGGGGAGGTGACTGACTCCCTT +
Preference number: 1 (lower is better)
Translates to: SISSWNLPLFPPTFS*ILIHMTFGEVTDSL
Trigger: AAGGGAGTCAGTCACCTCCCCAAAGGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp AGACCACACCTAAACCTCAGTTCACCAAAGTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGGCAAACCGATACTTTTAAAGATTGG +
Preference number: 1 (lower is better)
Translates to: RPHLNLSSPKFTCLA*RSVLNRQTDTFKDW
Trigger: CCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAACTGAGGTTTAGGTGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp TCTCCCAGCAGGATACAGATGCAGAGAGTCAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTTGTGTGC +
Preference number: 1 (lower is better)
Translates to: SPSRIQMQRVRLHSG*IGVFFKKMFPIFVC
Trigger: GCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp TTCATTTACAGACAGCGGACACCAAAAGAGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGT +
Preference number: 1 (lower is better)
Translates to: FIYRQRTPKERLYHN*LLGLVFKKELPVPS
Trigger: ACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCTGTAAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AACTTTCTCCTGAATTCTGATTCACATGACCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACACTTGCCAAGACAGACAGAAAGCTCA +
Preference number: 1 (lower is better)
Translates to: NFLLNSDSHDLWGGD*LPLFSHLPRQTESS
Trigger: TGAGCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAGGTCATGTGAATCAGAATTCAGGAGAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp TGTTCATGCCTCTCTCTTGCTCTCTCACCATTATACCTGGATGGCTaGTGGAATTCCGAGATGAAGATGAAGTTTTTCTCTAGAGTTATG +
Preference number: 1 (lower is better)
Translates to: CSCLSLALSPLYLDG*WNSEMKMKFFSRVM
Trigger: CATAACTCTAGAGAAAAACTTCATCTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TCTTCTATCCCACTGGAAAATTCCAGCCTCTGCATCCTTTCCACTTaGACAATAACTTCTAACAGTGCGAGAAACACTAGTTTGAAAGCC +
Preference number: 1 (lower is better)
Translates to: SSIPLENSSLCILST*TITSNSARNTSLKA
Trigger: GGCTTTCAAACTAGTGTTTCTCGCACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCAGAGGCTGGAATTTTCCAGTGGGATAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CTTGGAGACGTTTTGAACAGTATTGTCATGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATATGAAGGAGAAACCACAGCTGTCAAA +
Preference number: 1 (lower is better)
Translates to: LGDVLNSIVMSLETL*RVPNEYEGETTAVK
Trigger: TTTGACAGCTGTGGTTTCTCCTTCATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGACATGACAATACTGTTCAAAACGTCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GCTTGCAGGAGTGTGCTCAACAGGCAAACCGATACTTTTAAAGATTaGAGGCTTAATATCTTGTTTGCCTTCCAAGATGATATTTCTGTC +
Preference number: 1 (lower is better)
Translates to: ACRSVLNRQTDTFKD*RLNILFAFQDDISV
Trigger: GACAGAAATATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TCACTTAATAGCAGAAATCATCAACTAATACTGAATGAGAGAAAATaGGATGCTAATGAGGTAAATGGGAAGATGGTGATTGATGAGTTC +
Preference number: 1 (lower is better)
Translates to: SLNSRNHQLILNERK*DANEVNGKMVIDEF
Trigger: GAACTCATCAATCACCATCTTCCCATTTACCTCATTAGCATCCCATTTTCTCTCATTCAGTATTAGTTGATGATTTCTGCTATTAAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GCAGGCAGCAGGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: AGSRAGKGERQVAAS*VWPCWAELQEVLQR
Trigger: CCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCCTGCTGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGGGGCGCAGCTTCTTTaGGGATCAAGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWGAQLL*GSRGSG
Trigger: CCCTGACCCCCTTGATCCCCAAAGAAGCTGCGCCCC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CACACGTGGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTCCATGCCCTCATAGGGCCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: HTWPGQPKPGSCPGW*HPSFSVHALIGPQG
Trigger: TCCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTTGATCTCCAGTGCTaGAGGTGGGGCCTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVDLQC*RWGLLG
Trigger: TCCCAGCAGGCCCCACCTCCAGCACTGGAGATCAAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCGTGTGGATCAGACTaGTGGGCAGCCCCATGGCAC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSCGSD*WAAPWH
Trigger: GTGCCATGGGGCTGCCCATCAGTCTGATCCACACGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CAATTCCTGCGGAAGTCACTTCCAGCTGGGGCTACATGGCATCCCTaGGGCATGGGAGACCAGGACCTTCTGGAATCTTCAGCCGTGAGC +
Preference number: 2 (lower is better)
Translates to: QFLRKSLPAGATWHP*GMGDQDLLESSAVS
Trigger: GCTCACGGCTGAAGATTCCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCCGCAGGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPWVLY*TVPSSA
Trigger: TGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLQVPK*WCGMGS
Trigger: AGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGGCGCAGCTTCTTTaGGGATCAAGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGAQLL*GSRGSG
Trigger: CCCTGACCCCCTTGATCCCCAAAGAAGCTGCGCCCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp AGAAAAGGAGACTGGCACCTCTTCTCCTCTCTCTTGCTCCTGTTCTaGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACCATGGGT +
Preference number: 2 (lower is better)
Translates to: RKGDWHLFSSLLLLF*LCDVPAPPSPSTMG
Trigger: ACCCATGGTGGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCATCCTCCCAGGAATaGCGAGCTACCAGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCASSQE*RATSLL
Trigger: GAGCAGGCTGGTAGCTCGCCATTCCTGGGAGGATGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TGCGGGTTGTTAAGAAAAGGAGACTGGCACCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCT +
Preference number: 2 (lower is better)
Translates to: CGLLRKGDWHLFSSL*LLFLLCDVPAPPSP
Trigger: AGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAACAACCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLQVPK*WCGMGS
Trigger: AGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTTCCTCCCTACTCCTaGACAGTGGCTAATCTCTCT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFPPYS*TVANLS
Trigger: AGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTGCTGGGAGATATTTaGGTCATAGGGACAGATTCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLGDI*VIGTDS
Trigger: GGAATCTGTCCCTATGACCCAAATATCTCCCAGCAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSAIHG*NPDPLS
Trigger: ACTGAGAGGGTCTGGATTTCACCCATGAATTGCACT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAACAGCCTGCAGAACTaGGAGCCAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWNSLQN*EPNKPL
Trigger: AAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSECLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCTGGATTCAGAACTaGGGAAGAAAATCAGACCCC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSWIQN*GRKSDP
Trigger: GGGGTCTGATTTTCTTCCCCAGTTCTGAATCCAGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCACCAACCCAATGCCTaGACAGACTTTCTGAGTCTA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHHQPNA*TDFLSL
Trigger: TAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSENGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFQKTG*RRLSRT
Trigger: AGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCTGAGGAAAAGAGATaGGTGAGTCTATGCCCGGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPEEKR*VSLCPA
Trigger: TGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GCACAGTGGCTAATCTCTCTGCCAATGAAATCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCAGCAGGAGGCAGAAGAACTCGCAGA +
Preference number: 2 (lower is better)
Translates to: AQWLISLPMKSNPHL*KGLCSPAGGRRTRR
Trigger: TCTGCGAGTTCTTCTGCCTCCTGCTGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGATTTCATTGGCAGAGAGATTAGCCACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TTTGTCAGATCAGTCACGTGGGACCCAAGCACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTAGATTCTGTCTGGGGGCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: FVRSVTWDPSTFWKP*LIVPMLDSVWGLCG
Trigger: CCCACAAAGCCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTCCCACGTGACTGATCTGACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLSTRS*QDPFLA
Trigger: GGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTTCCTCCCTACTCCTaGACAGTGGCTAATCTCTCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFPPYS*TVANLS
Trigger: AGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAGCTTAGCAGCTTCTaGAAGGAAGGAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEELSSF*KEGEQG
Trigger: TCCTTGCTCTCCTTCCTTGCAGAAGCTGCTAAGCTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGAGTTCTTTCTTCTaGTCTCCTGGCCTCAGTTTA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLSSFF*SPGLSL
Trigger: TAAACTGAGGCCAGGAGAGCAGAAGAAAGAACTCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAATGGATGTGGTTGGGTaGTTCGGGGGTCAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRMDVVG*FGGQGK
Trigger: TTTTCCCTGACCCCCGAACCACCCAACCACATCCAT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELREVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAAAAAGCTTCTTCCTaGATTCAGAACTGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHEKASS*IQNWGR
Trigger: TCTTCCCCAGTTCTGAATCCAGGAAGAAGCTTTTTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAGGCATTCTGGGCTTaGCAGATGTCAGCATCCTCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEAFWA*QMSASS
Trigger: GGAGGATGCTGACATCTGTCAAGCCCAGAATGCCTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELREQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAACAGCCTGCAGAACTaGGAGCCAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNSLQN*EPNKPL
Trigger: AAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRATGL*NSPPGA
Trigger: AGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTGCTGGGAGATATTTaGGTCATAGGGACAGATTCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLLGDI*VIGTDS
Trigger: GGAATCTGTCCCTATGACCCAAATATCTCCCAGCAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTTTTGGTTGGTCCTTaGAGAAAAAGCTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHFLVGP*RKSFFL
Trigger: CAGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGATTCCTCATGAATaGCTCGGTGCCCTCCCTGTA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQIPHE*LGALPV
Trigger: TACAGGGAGGGCACCGAGTCATTCATGAGGAATCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELREVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACCATTATACCTGGATaGCTGCTGGAATTCCGAGAT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETIIPG*LLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCTTTGTGGGTATCTaGAAAGGTGGGGCGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGFVGI*KGGAQL
Trigger: AAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAACCTAGATAGTGGGTaGAAGAGTCCTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNLDSG*KSPGSW
Trigger: CCAGGAGCCAGGACTCTTCCACCCACTATCTAGGTT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGAGTTGAGAGCCACTaGCTTGTGCAACTCTCCACC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRVESH*LVQLST
Trigger: GGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp ATAGTCTCCCACAGAGGGAAAGTTTCTACAGCTGCCCTCAGGCTGTaGCCAGTAGCACTTGCAGAGGTGAATGAGAAAACTTTCATTGGA +
Preference number: 2 (lower is better)
Translates to: IVSHRGKVSTAALRL*PVALAEVNEKTFIG
Trigger: TCCAATGAAAGTTTTCTCATTCACCTCTGCAAGTGCTACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTCCCTCTGTGGGAGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CATGGGTCAAAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTaGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCCAAATAAA +
Preference number: 2 (lower is better)
Translates to: HGSKLSEVSPEAKQM*IPCSNSLQNCEPNK
Trigger: TTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTTTGACCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TTGTCTCCCTCAGGTCCAGGGATGGAGCAATATCGCAGTTGCACCTaGCATTCCCTGGAATATTCCTTCCTAATTAGCCTGCTCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LSPSGPGMEQYRSCT*HSLEYSFLISLLFY
Trigger: ATAGAAGAGCAGGCTAATTAGGAAGGAATATTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCCATCCCTGGACCTGAGGGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSEAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCACCCCTATGGATGTaGTTGGGTGGTTCGGGGGTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREAPLWM*LGGSGV
Trigger: GACCCCCGAACCACCCAACCACATCCATAGGGGTGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp AGCGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATTCATGGGT +
Preference number: 2 (lower is better)
Translates to: SGHQKRDFITTASWD*CSKRSSQFLVQFMG
Trigger: ACCCATGAATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRENLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAGCTTAGCAGCTTCTaGAAGGAAGGAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGELSSF*KEGEQG
Trigger: TCCTTGCTCTCCTTCCTTGCAGAAGCTGCTAAGCTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSCILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGGGTTAGAGACTTGTaGATCCTGCAGCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRVRDL*ILQLLS
Trigger: AGAGAGCAGCTGCAGGATCCACAAGTCTCTAACCCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TGCCTAAGACCACACCTAAACCTCAGTTCACCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTCAACAGGCAAACCGATACTTTTAAA +
Preference number: 2 (lower is better)
Translates to: CLRPHLNLSSPKFTC*ACRSVLNRQTDTFK
Trigger: TTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAACTGAGGTTTAGGTGTGGTCTTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TACAGACAGCGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATT +
Preference number: 2 (lower is better)
Translates to: YRQRTPKERLYHNCL*GLVFKKELPVPSAI
Trigger: AATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCAGAGGACAGCATCTaGAGCCCTTTAAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSEDSI*SPLRTF
Trigger: GAAAGTTCTTAAAGGGCTGCAGATGCTGTCCTCTGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp ACTCAGGCTGAATTGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCAGGGTGGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: TQAELECSLRKCSLF*CALANSGWNARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAAGGCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CCAGCAGGATACAGATGCAGAGAGTCAGGTTGCACTCAGGCTGAATaGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTTGTGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: PAGYRCRESGCTQAE*ECSLRKCSLFLCAL
Trigger: CAAGGCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CCTTTCTTGGCCAATCTAGGTCTTTCCCAGGGAGAACAACAGGGCTaGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGA +
Preference number: 2 (lower is better)
Translates to: PFLANLGLSQGEQQG*LEKQLLGRQSTLGR
Trigger: TCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTGTTGTTCTCCCTGGGAAAGACCTAGATTGGCCAAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRENGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCAGAGGACAGCATCTaGAGCCCTTTAAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSEDSI*SPLRTF
Trigger: GAAAGTTCTTAAAGGGCTGCAGATGCTGTCCTCTGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRLYHN*LLGLVF
Trigger: GAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCTTGTGGGTGGGACTaGAAAAACCTCATTCTTTGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSCGWD*KNLILC
Trigger: ACAAAGAATGAGGTTTTTCCAGTCCCACCCACAAGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETEPFV*IRLMGS
Trigger: GCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAACCTAGATAGTGGGTaGAAGAGTCCTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRENLDSG*KSPGSW
Trigger: CCAGGAGCCAGGACTCTTCCACCCACTATCTAGGTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GGGAAACTGCTAGATTTAGGTGAAGAGCAACGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTGGACTTAAACCGAGTACGAGGCATT +
Preference number: 2 (lower is better)
Translates to: GKLLDLGEEQRAKLS*IYDLSLDLNRVRGI
Trigger: AATGCCTCGTACTCGGTTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGCVTC*SLKVSS
Trigger: AGATGAAACTTTTAGACTTCAGCACGTCACACATCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGATGTATTAATATTCTaGATTTGGACCGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDVLIF*IWTGSS
Trigger: ACTAGAACCGGTCCAAATGCAGAATATTAATACATC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGITTAS*DLCSKR
Trigger: CCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GAATTGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTTGTGTGCCTaGGCAAACTCAGGGTGGAATGCAAGGGTTGCCATGGTAATATCC +
Preference number: 2 (lower is better)
Translates to: ELECSLRKCSLFLCA*ANSGWNARVAMVIS
Trigger: GGATATTACCATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAAGGCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CTCCCTTTATTTTCACACTTGCCAAGACAGACAGAAAGCTCATCTTaGATGCTCCCTCGAGTCAGCAAGTCCTTAGAGAATAAACAAAAC +
Preference number: 2 (lower is better)
Translates to: LPLFSHLPRQTESSS*MLPRVSKSLENKQN
Trigger: GTTTTGTTTATTCTCTAAGGACTTGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGATGTATTAATATTCTaGATTTGGACCGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPDVLIF*IWTGSS
Trigger: ACTAGAACCGGTCCAAATGCAGAATATTAATACATC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAACATATACTGGAAGTaGTGTTATAGTGGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNIYWK*CYSGQK
Trigger: TTTCTGGCCACTATAACAGCACTTCCAGTATATGTT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGCVTC*SLKVSS
Trigger: AGATGAAACTTTTAGACTTCAGCACGTCACACATCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRECILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TGTGTGGAGGAAGAGTCTGCCCGCACGGCATGCACATaGGCGGTGAGCTGCAACACAGTGTGGCTGGCGGGA +
Preference number: 3 (lower is better)
Translates to: CVEEESARTACT*AVSCNTVWLAG
Trigger: TCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GTCTGCTGTGTGGAGGAAGAGTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGCAACACAGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VCCVEEESARTA*TCAVSCNTVWL
Trigger: CAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTGGGGAGGGTGGGCTaGCTTCCAGGTCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLGRVG*LPGHWE
Trigger: CTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATGCGCGGTGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: SIGPCLLCGGRV*PHGMHMRGELQ
Trigger: TTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGACACGGACCTATGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGGGGAAAGGCAGGTaGCTGCCTCCTTGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHRGKGR*LPPWSG
Trigger: GCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCCCCAGGCTCTTGGGAG +
Preference number: 3 (lower is better)
Translates to: WSGLAGLNSRKF*RGTCDPPGSWE
Trigger: CTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GGGGAAAGGCAGGTTGCTGCCTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAAGTTTTGCAGAGGGAC +
Preference number: 3 (lower is better)
Translates to: GERQVAASLVWP*WAELQEVLQRD
Trigger: GTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ACGTGGTGGGTCTCCATGACTCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGCCAGTCCCAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: TWWVSMTPDGWV*VSKPHRQSQSP
Trigger: AGGGGACTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTTaGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: GQVRGKGRLLPP*SGLAGLNSRKF
Trigger: AAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ACAGTAAACACAGATCCCAGGACATGTGACCACACGTaGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: TVNTDPRTCDHT*PGQPKPGSCPG
Trigger: CCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp CCAGGGTGCAAGTCACCGGGACAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCTAGCTCAGGGCCGTCT +
Preference number: 3 (lower is better)
Translates to: PGCKSPGQTLSS*SLRNAASSGPS
Trigger: AGACGGCCCTGAGCTAGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTGTCCCGGTGACTTGCACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAGCAAGGACACAGTAAACACAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCAGCCCAAACCAGGGAG +
Preference number: 3 (lower is better)
Translates to: EQGHSKHRSQDM*PHVARPAQTRE
Trigger: CTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGTGTCCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCACGGCATGCACATGCG +
Preference number: 3 (lower is better)
Translates to: HPSIVHRSVSAV*RKSLPARHAHA
Trigger: CGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CGGCATAGAGACGTGGTGGGTCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAAACCTCACCGCCAGTC +
Preference number: 3 (lower is better)
Translates to: RHRDVVGLHDSR*LGVGIKTSPPV
Trigger: GACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CACTCAGCCTCCACACAGTTGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGACAGAATGAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: HSASTQLGSQGH*FLSPEDRMRGE
Trigger: CTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHCPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TGGGCTGAACTCCAGGAAGTTTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGAGCTTACATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: WAELQEVLQRDL*SPRLLGAYICS
Trigger: GGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ATAGAGACGTGGTGGGTCTCCATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCTCACCGCCAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: IETWWVSMTPDG*VWVSKPHRQSQ
Trigger: CTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGAAGTCACTTCCAGCTGGGGCTACATGGCATCCCTTaGGCATGGGAGACCAGGACCTTCTGGAATCTTCAG +
Preference number: 3 (lower is better)
Translates to: GSHFQLGLHGIP*AWETRTFWNLQ
Trigger: CTGAAGATTCCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTTCCTTGGAGAGAGTaGAGAGCCACTGGCTTGTGC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHFPWRE*RATGLC
Trigger: GCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GGCTCTAGGAACAGAAAGCCAAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACCAATGGCAGTCCTCTA +
Preference number: 3 (lower is better)
Translates to: GSRNRKPSADGN*EHPSSTNGSPL
Trigger: TAGAGGACTGCCATTGGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCTCCTCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTTCCACCATGGGTCAAA +
Preference number: 3 (lower is better)
Translates to: SPLSCSCSCCVT*LLPLHLPPWVK
Trigger: TTTGACCCATGGTGGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AAGAGATGGGTGAGTCTATGCCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCCCAAGGTCAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: KRWVSLCPAWGL*STDELPQGQGR
Trigger: CCTACCCTGACCTTGGGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCATAGACTCACCCATCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TCTTCTGTGGCAACCCTGAAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACC +
Preference number: 3 (lower is better)
Translates to: SSVATLKSASWN*GLTSAESLLLT
Trigger: GGTCAACAGGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAGAGCCACTGGCTTGTGCAACTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCCAATCTAGGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: ESHWLVQLSTRS*QDPFLANLGLS
Trigger: GGAAAGACCTAGATTGGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TACGATCACAGCGACCCCTCCTCCCCATCCAACAGTTaGCAGTTCACCAACCCAATGCCTGGACAGACTTTC +
Preference number: 3 (lower is better)
Translates to: YDHSDPSSPSNS*QFTNPMPGQTF
Trigger: GAAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAGGAGGGGTCGCTGTGATCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCTAGGAACAGAAAGCCA +
Preference number: 3 (lower is better)
Translates to: QSWEKGSLQVPK*WCGMGSRNRKP
Trigger: TGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTaGGTTGAAAGAATGGGGAGTGGAGGTGACTGTGTG +
Preference number: 3 (lower is better)
Translates to: RVDLSRESPVDP*VERMGSGGDCV
Trigger: CACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GACCTTAACTTACAAAGGTCATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCAGATGGCTGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: DLNLQRSSGIET*WVSMTPDGWVW
Trigger: CCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGACCTTTGTAAGTTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGGAAAGGAATCCTGCAGCCTTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACTCCTTTTCCTCCCTAC +
Preference number: 3 (lower is better)
Translates to: RKGILQPFQKTG*RRLSRTPFPPY
Trigger: GTAGGGAGGAAAAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ACCAGCCTGCTCTTGAAATGCACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGCCCCATGGCACTCAAT +
Preference number: 3 (lower is better)
Translates to: TSLLLKCTEPFV*IRLMGSPMALN
Trigger: ATTGAGTGCCATGGGGCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGTGCATTTCAAGAGCAGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CCCATCACACCTGAGGAAAAGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGCTCAACTGATGAACTA +
Preference number: 3 (lower is better)
Translates to: PITPEEKRWVSL*PAWGLCSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGGTGTGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AAGCCATTGCTAATAGTCCCGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTGGAAAGGTGGGGCGCA +
Preference number: 3 (lower is better)
Translates to: KPLLIVPMLDSV*GLCGYLERWGA
Trigger: TGCGCCCCACCTTTCCAGATACCCACAAAGCCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCTGTCTGGGGGCTTaGTGGGTATCTGGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFCLGA*WVSGKV
Trigger: CACCTTTCCAGATACCCACAAAGCCCCCAGACAGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTCTGTCTGGGGGCTTaGTGGGTATCTGGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFCLGA*WVSGKV
Trigger: CACCTTTCCAGATACCCACAAAGCCCCCAGACAGAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TGCAACCCCAGTTGCACTCAACCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCATCCATCCATAGTCCA +
Preference number: 3 (lower is better)
Translates to: CNPSCTQPWVLY*TVPSSASIHSP
Trigger: TGGACTATGGATGGATGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTGGGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TCACTGGTTCCTAAGTCCGGAGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTCCTGCGGAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: SLVPKSGGQNEG*AIPSQFLRKSL
Trigger: AAGTGACTTCCGCAGGAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTTaGTACCTTGCTCAAACAGCCTGCAGAACTGCGAGC +
Preference number: 3 (lower is better)
Translates to: SFLRSHQKPSRC*YLAQTACRTAS
Trigger: GCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp ATTCATAGTCTCCCACAGAGGGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGTAGCACTTGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: IHSLPQRESFYS*PQAVASSTCRG
Trigger: ACCTCTGCAAGTGCTACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTCCCTCTGTGGGAGACTATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GATTCTCCCCTTCTGGGGCAGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGTAAGGCCTTTAGGTTA +
Preference number: 3 (lower is better)
Translates to: DSPLLGQLSNQV*REDGYGKAFRL
Trigger: TAACCTAAAGGCCTTACCATAGCCATCTTCCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHNKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTGGGGAGGGTGGGCTaGCTTCCAGGTCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELGRVG*LPGHWE
Trigger: CTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGAGAGCCACTGGCTaGTGCAACTCTCCACCAGGA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLRATG*CNSPPG
Trigger: TCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GATATGAGAGCTGCCAAGCTCCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCTTCTATTTACACCCAA +
Preference number: 3 (lower is better)
Translates to: DMRAAKLQSSWP*SIPSCASIYTQ
Trigger: TTGGGTGTAAATAGAAGCACAGCTGGGGATTGATCATGGCCAGGACGATTGGAGCTTGGCAGCTCTCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CTGTCCTGGGTGGTTGCATCCTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGGAAACTGCTAGATTTA +
Preference number: 3 (lower is better)
Translates to: LSWVVASFIFCP*PHRASGKLLDL
Trigger: TAAATCTAGCAGTTTCCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AATTTTCCTTGGAGAGAGTTGAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCTGACAGGATCCTTTCT +
Preference number: 3 (lower is better)
Translates to: NFPWRELRATGL*NSPPGADRILS
Trigger: AGAAAGGATCCTGTCAGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAAAACTTTCATTGGAGACCTTGGGTGCTCCAAGTCTaGAAAGGCAGTAGGGAGAAAGCTGAGCAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: ENFHWRPWVLQV*KGSREKAEQED
Trigger: GTCTTCCTGCTCAGCTTTCTCCCTACTGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AAAAAGGAGCTCCCAGTTCCTAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGTAGGGAGCATTCACTC +
Preference number: 3 (lower is better)
Translates to: KKELPVPSAIHG*NPDPLSREHSL
Trigger: GAGTGAATGCTCCCTACTGAGAGGGTCTGGATTTCACCCATGAATTGCACTAGGAACTGGGAGCTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AAGGCAGAGATACCACCCAGATTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACAGATGCAGAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: KAEIPPRFFKGN*LSQQDTDAESQ
Trigger: CTGACTCTCTGCATCTGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAATCTGGGTGGTATCTCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GAGGTCTCACCAGAAGCCAAGCAGATGTTGATACCTTaGTCAAACAGCCTGCAGAACTGCGAGCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: EVSPEAKQMLIP*SNSLQNCEPNK
Trigger: TTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GCTCCAATCGTCCTGGCCATGATCAATCCCCAGCTGTaGTTCTATTTACACCCAACATATTGGGGGCAATAT +
Preference number: 3 (lower is better)
Translates to: APIVLAMINPQL*FYLHPTYWGQY
Trigger: ATATTGCCCCCAATATGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGATCATGGCCAGGACGATTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TCTCCAGAACTCCTTTTCCTCCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATGAAATCTAACCCTCAC +
Preference number: 3 (lower is better)
Translates to: SPELLFLPTPAQ*LISLPMKSNPH
Trigger: GTGAGGGTTAGATTTCATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAAAGGAGTTCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TTTAAGAACTTTCTTTGTCTCCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCACCTTGCATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: FKNFLCLPQVQG*SNIAVAPCIPW
Trigger: CCAGGGAATGCAAGGTGCAACTGCGATATTGCTCCATCCCTGGACCTGAGGGAGACAAAGAAAGTTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSENKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GAGGTGAATGAGAAAACTTTCATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCAGTAGGGAGAAAGCTG +
Preference number: 3 (lower is better)
Translates to: EVNEKTFIGDLG*SKSEKAVGRKL
Trigger: CAGCTTTCTCCCTACTGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAGTTTTCTCATTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCAGGGAAAAACAGGAAAGTATATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAGTCCAGATGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SGKNRKVYPFKI*YALPSKSRWER
Trigger: CCTCTCCCATCTGGACTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATATACTTTCCTGTTTTTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CCTCTCCCAGCAGGATACAGATGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAGTGTTCTTTAAGAAAA +
Preference number: 3 (lower is better)
Translates to: PLPAGYRCRESG*TQAELECSLRK
Trigger: TTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCTTTTAAGACAGATGTTCTTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACAACCAGGATGTGTGAC +
Preference number: 3 (lower is better)
Translates to: SFKTDVLQGLQL*RPPGYTTRMCD
Trigger: GTCACACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATCTGTCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AGACAGCGGACACCAAAAGAGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTCAAAAAGGAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: RQRTPKERLYHN*LLGLVFKKELP
Trigger: TGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CCTCCCCATCCAACAGTTGACAGTTCACCAACCCAATaGCTGGACAGACTTTCTGAGTCTAATTTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: PPHPTVDSSPTQ*LDRLSESNFSP
Trigger: TGGAGAAAAATTAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TTTGTCAGATCAGTCACGTGGGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTCCCGATGCTAGATTCT +
Preference number: 3 (lower is better)
Translates to: FVRSVTWDPSTF*KPLLIVPMLDS
Trigger: AGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTCCCACGTGACTGATCTGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGGAAAAAGAACAAGAATCTAGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGACTTGTGGATCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GKKNKNLGFYVA*GRRVRDLWILQ
Trigger: CTGCAGGATCCACAAGTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCCTAGATTCTTGTTCTTTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TGTTCCCTATTTTTGTGTGCCTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATGGTAATATCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: CSLFLCALANSG*NARVAMVISLF
Trigger: AAAGAGGGATATTACCATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAAGGCACACAAAAATAGGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGACACCAAAAGAGAGACTTTATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: GHQKRDFITTAS*DLCSKRSSQFL
Trigger: TAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREEVQPQ*HSTLGS
Trigger: AGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCTTTATTTTCACACTaGCCAAGACAGACAGAAAGC +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPLFSH*PRQTES
Trigger: GCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GGGAGCTTACATCTGCTCCCTCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGTGCTCATCAGGAATAT +
Preference number: 3 (lower is better)
Translates to: GSLHLLPPPYYG*SLSFTCAHQEY
Trigger: ATATTCCTGATGAGCACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGGAGGGAGCAGATGTAAGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GACCTCCTGGTTATACAACCAGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCTCAGTTCATCTGTACC +
Preference number: 3 (lower is better)
Translates to: DLLVIQPGCVTC*SLKVSSQFICT
Trigger: GGTACAGATGAACTGAGATGAAACTTTTAGACTTCAGCACGTCACACATCCTGGTTGTATAACCAGGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GGGATCACTGAAGAGGCCAATGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATGTTCTTCAGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: GITEEANENVLI*GLLRQMFFRGC
Trigger: GCAACCCCTGAAGAACATCTGTCTTAAAAGACCTCAAATCAGAACATTCTCATTGGCCTCTTCAGTGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CTCTCTCTTGCTCTCTCACCATTATACCTGGATGGCTaGTGGAATTCCGAGATGAAGATGAAGTTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSLALSPLYLDG*WNSEMKMKFFS
Trigger: AGAGAAAAACTTCATCTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GTTCACCAAAGTTCACGTGTTTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATACTTTTAAAGATTGGA +
Preference number: 3 (lower is better)
Translates to: VHQSSRVWLAGV*STGKPILLKIG
Trigger: TCCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CCCATCCAACAGTTGACAGTTCACCAACCCAATGCCTaGACAGACTTTCTGAGTCTAATTTTTCTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: PIQQLTVHQPNA*TDFLSLIFLQS
Trigger: ACTTTGGAGAAAAATTAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAG +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGYHNCL*GLVFKK
Trigger: CTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAATAAACAAAACCTCTaGCCTGCAAGCTGTGACACA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNKQNL*PASCDT
Trigger: TGTGTCACAGCTTGCAGGCAAGAGGTTTTGTTTATT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AGGATACAGATGCAGAGAGTCAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAGAAAATGTTCCCTATT +
Preference number: 3 (lower is better)
Translates to: RIQMQRVRLHSG*IGVFFKKMFPI
Trigger: AATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAG +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREYHNCL*GLVFKK
Trigger: CTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AGGAAAAGTCAGGAAATTACAGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTCAGTTCTCTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: RKSQEITDLEWC*KQILGFSSLPQ
Trigger: TTGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAACACCATTCCAAGTCTGTAATTTCCTGACTTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GTTTTGAACAGTATTGTCATGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATATGAAGGAGAAACCACA +
Preference number: 3 (lower is better)
Translates to: VLNSIVMSLETL*RVPNEYEGETT
Trigger: TGTGGTTTCTCCTTCATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGACATGACAATACTGTTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRERLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRENKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGTGTGCTCAACAGGCAAACCGATACTTTTAAAGATTaGAGGCTTAATATCTTGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: SVLNRQTDTFKD*RLNILFAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAAGGCCAGAAGATCTTATGTGAAAATACAGTCGTTTaGTCTCTCCATCTTTCCATTTTGGATTGCATTTCT +
Preference number: 3 (lower is better)
Translates to: EGQKILCENTVV*SLHLSILDCIS
Trigger: AGAAATGCAATCCAAAATGGAAAGATGGAGAGATCAAACGACTGTATTTTCACATAAGATCTTCTGGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGCAGAAATCATCAACTAATACTGAATGAGAGAAAATaGGATGCTAATGAGGTAAATGGGAAGATGGTGATT +
Preference number: 3 (lower is better)
Translates to: SRNHQLILNERK*DANEVNGKMVI
Trigger: AATCACCATCTTCCCATTTACCTCATTAGCATCCCATTTTCTCTCATTCAGTATTAGTTGATGATTTCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTTTTCCCTCTTGCTaGGCCGGGGCTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSFPSC*AGAPQP
Trigger: GGGCTGCGGAGCCCCGGCCCAGCAAGAGGGAAAAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKWLAGG*YSMPLR
Trigger: CCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGGGGCGGTGCGGAATaGATGCGCCGAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGGGAE*MRRAGS
Trigger: GCTGCCCGCTCGGCGCATCCATTCCGCACCGCCCCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCATCTTTTCCCAGGTaGGGAAGTCGGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWASFPR*GSRGPG
Trigger: GCCAGGCCCCCGACTTCCCCACCTGGGAAAAGATGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCGGTGCGGAATGGATaGGCCGAGCGGGCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAVRNG*AERAAL
Trigger: GAGCGCTGCCCGCTCGGCGCATCCATTCCGCACCGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSWLAGG*YSMPLR
Trigger: CCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp AGGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RAGKGERQVAAS*VWPCWAELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSTRS*QDPFLA
Trigger: GGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTGTTCGCTGTCACTaGCAGCAGAGAGCGATCGGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAVRCH*QQRAIG
Trigger: ACCGATCGCTCTCTGCTGGCAGTGACAGCGAACAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCGGCGGTCACATGGTaGAACGGCATCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPAVTW*NGIFSL
Trigger: GAGGGAAAAGATGCCGTTCCACCATGTGACCGCCGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCACCCCTATGGATGTaGTTGGGTGGTTCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHAPLWM*LGGSGV
Trigger: GACCCCCGAACCACCCAACCACATCCATAGGGGTGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGIPWA*ETRTFW
Trigger: