Pregenerated sensors for CALM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000143933Ensembl transcript IDs: ENST00000409563.5, ENST00000456319.6, ENST00000460218.5, ENST00000482532.5, ENST00000484408.5, ENST00000489742.1, ENST00000655728.1, ENST00000656538.1, ENST00000668667.1, ENST00000670593.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATGGGGGTGGGGGAGCACCTGCGACACAACCGTCGCCGGCATCCCTaGCCTCTTTCGCGCCATCCCTCTGGCAGAAACCACTCCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: MGVGEHLRHNRRRHP*PLSRHPSGRNHSLK Trigger: CTTCAAGGAGTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGATGCCGGCGACGGTTGTGTCGCAGGTGCTCCCCCACCCCCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000484408.5 ENST00000656538.1 |
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| CDS TCA 90 bp | CAGTTGGTCAGCCGTCGGTCGGGTGGATTGAATTCGCCCCCTGCTTaGCCTTTCCAGACGCCCGACAGAAGGCTCTCTACGCTCCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: QLVSRRSGGLNSPPA*PFQTPDRRLSTLPL Trigger: GAGAGGGAGCGTAGAGAGCCTTCTGTCGGGCGTCTGGAAAGGTCAAGCAGGGGGCGAATTCAATCCACCCGACCGACGGCTGACCAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655728.1 |
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| CDS GCA 90 bp | CAGTCAGTTGGTCAGCCGTCGGTCGGGTGGATTGAATTCGCCCCCTaGTTGACCTTTCCAGACGCCCGACAGAAGGCTCTCTACGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: QSVGQPSVGWIEFAP*LTFPDARQKALYAP Trigger: GGGAGCGTAGAGAGCCTTCTGTCGGGCGTCTGGAAAGGTCAAGCAGGGGGCGAATTCAATCCACCCGACCGACGGCTGACCAACTGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655728.1 |
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| CDS CCA 90 bp | ACACAACCGTCGCCGGCATCCCTGGCCTCTTTCGCGCCATCCCTCTaGCAGAAACCACTCCTTGAAGGTGTAAGGGAGGCGAGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TQPSPASLASFAPSL*QKPLLEGVREASFL Trigger: AAGGAAACTCGCCTCCCTTACACCTTCAAGGAGTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGATGCCGGCGACGGTTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000484408.5 ENST00000489742.1 ENST00000656538.1 |
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| CDS CCA 90 bp | GCTATGTACAAAGCTAACCTGCGACACAACCGTCGCCGGCATCCCTaGCCTCTTTCGCGCCATCCCTCTGGCAGAAACCACTCCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: AMYKANLRHNRRRHP*PLSRHPSGRNHSLK Trigger: CTTCAAGGAGTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGATGCCGGCGACGGTTGTGTCGCAGGTTAGCTTTGTACATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489742.1 |
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| CDS GCA 90 bp | TGCAGGGTTGTTGTGCAAAGTGAGATGCTATGTACAAAGCTAACCTaGGACACAACCGTCGCCGGCATCCCTGGCCTCTTTCGCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: CRVVVQSEMLCTKLT*DTTVAGIPGLFRAI Trigger: GATGGCGCGAAAGAGGCCAGGGATGCCGGCGACGGTTGTGTCGCAGGTTAGCTTTGTACATAGCATCTCACTTTGCACAACAACCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489742.1 |
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| CDS TCA 90 bp | ATCCCTGGCCTCTTTCGCGCCATCCCTCTGGCAGAAACCACTCCTTaGAGGTGTAAGGGAGGCGAGTTTCCTTTGTTTAGTCAGTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: IPGLFRAIPLAETTP*RCKGGEFPLFSQFA Trigger: AGCGAACTGACTAAACAAAGGAAACTCGCCTCCCTTACACCTTCAAGGAGTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000484408.5 ENST00000489742.1 ENST00000656538.1 |
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| CDS TCA 90 bp | AACGTATTAACTCTTAAAGCCTACTCAGTGGTGGGATCGTGCCAGTaGACAGCCACTGCACTTCAGCCTGGCCAAACTGTAAGACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: NVLTLKAYSVVGSCQ*TATALQPGQTVRPH Trigger: GTGGGGTCTTACAGTTTGGCCAGGCTGAAGTGCAGTGGCTGTTCACTGGCACGATCCCACCACTGAGTAGGCTTTAAGAGTTAATACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482532.5 ENST00000670593.1 |
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| CDS CCA 90 bp | ACTCTCAGGTTCCTCCCTAGACCTCCTGTACTAGAATGTTCATTTTaGAGAACCATAGGTGATCTGTCAACACTAAGGAGCACGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: TLRFLPRPPVLECSF*RTIGDLSTLRSTTP Trigger: CGGGGTCGTGCTCCTTAGTGTTGACAGATCACCTATGGTTCTCCAAAATGAACATTCTAGTACAGGAGGTCTAGGGAGGAACCTGAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS GCA 90 bp | CTATATGTTCCTTCTAATACATCACTAGATTACATGGAAACCTCCTaGTGGTGCAACACTCCAGACTACCTGGCTTCATTCACCATTTAC | + |
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Preference number: 5 (lower is better) Translates to: LYVPSNTSLDYMETS*WCNTPDYLASFTIY Trigger: GTAAATGGTGAATGAAGCCAGGTAGTCTGGAGTGTTGCACCAGCAGGAGGTTTCCATGTAATCTAGTGATGTATTAGAAGGAACATATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482532.5 |
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| CDS CCA 90 bp | TATGTTCCTTCTAATACATCACTAGATTACATGGAAACCTCCTGCTaGTGCAACACTCCAGACTACCTGGCTTCATTCACCATTTACAGA | + |
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Preference number: 5 (lower is better) Translates to: YVPSNTSLDYMETSC*CNTPDYLASFTIYR Trigger: TCTGTAAATGGTGAATGAAGCCAGGTAGTCTGGAGTGTTGCACCAGCAGGAGGTTTCCATGTAATCTAGTGATGTATTAGAAGGAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482532.5 |
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| CDS GCA 90 bp | ACTTTGTTTAAGCTGAGAAAATTTATGCAAACTAAATCCACAAGGTaGAACCCAGCGACAGATGCAGCGGACATCACTTTAAGGCTAAAA | + |
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Preference number: 5 (lower is better) Translates to: TLFKLRKFMQTKSTR*NPATDAADITLRLK Trigger: TTTTAGCCTTAAAGTGATGTCCGCTGCATCTGTCGCTGGGTTGCACCTTGTGGATTTAGTTTGCATAAATTTTCTCAGCTTAAACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 90 bp | TGCTTATTAGTATATACATCCATGAAGCAACTGCTTATGGGGTATTaGGAAGCACAGACAAGAAATAGCCTCCTATCTAAAATCCCTACC | + |
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Preference number: 5 (lower is better) Translates to: CLLVYTSMKQLLMGY*EAQTRNSLLSKIPT Trigger: GGTAGGGATTTTAGATAGGAGGCTATTTCTTGTCTGTGCTTCTCAATACCCCATAAGCAGTTGCTTCATGGATGTATATACTAATAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS GCA 90 bp | TACTTTGTATTAATAGAAGCTACATTACTTCAGTTTATTGCATTTTaGAGGACTTCCACCATTTCTGAAAGGAAGGGCAACCTGGCATGC | + |
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Preference number: 5 (lower is better) Translates to: YFVLIEATLLQFIAF*RTSTISERKGNLAC Trigger: GCATGCCAGGTTGCCCTTCCTTTCAGAAATGGTGGAAGTCCTGCAAAATGCAATAAACTGAAGTAATGTAGCTTCTATTAATACAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 90 bp | TTTACATCTTTTACTTACCTAATCACCCTGCACTCAAAGTCCTCTTaGAGCAATCCCGTTTTCAATGAGCATATGTTGATTACATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: FTSFTYLITLHSKSS*SNPVFNEHMLITCK Trigger: TTTACATGTAATCAACATATGCTCATTGAAAACGGGATTGCTTCAAGAGGACTTTGAGTGCAGGGTGATTAGGTAAGTAAAAGATGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS CCA 72 bp | GGGGAGCACCTGCGACACAACCGTCGCCGGCATCCCTaGCCTCTTTCGCGCCATCCCTCTGGCAGAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: GEHLRHNRRRHP*PLSRHPSGRNH Trigger: GTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGATGCCGGCGACGGTTGTGTCGCAGGTGCTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484408.5 ENST00000656538.1 |
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| CDS CCA 72 bp | TCGCCGGCATCCCTGGCCTCTTTCGCGCCATCCCTCTaGCAGAAACCACTCCTTGAAGGTGTAAGGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPASLASFAPSL*QKPLLEGVREA Trigger: CGCCTCCCTTACACCTTCAAGGAGTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGATGCCGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000484408.5 ENST00000489742.1 ENST00000656538.1 |
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| CDS TCA 72 bp | AGCCGTCGGTCGGGTGGATTGAATTCGCCCCCTGCTTaGCCTTTCCAGACGCCCGACAGAAGGCTCTCTACG | + |
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Preference number: 6 (lower is better) Translates to: SRRSGGLNSPPA*PFQTPDRRLST Trigger: CGTAGAGAGCCTTCTGTCGGGCGTCTGGAAAGGTCAAGCAGGGGGCGAATTCAATCCACCCGACCGACGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655728.1 |
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| CDS CCA 72 bp | AAAGCTAACCTGCGACACAACCGTCGCCGGCATCCCTaGCCTCTTTCGCGCCATCCCTCTGGCAGAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: KANLRHNRRRHP*PLSRHPSGRNH Trigger: GTGGTTTCTGCCAGAGGGATGGCGCGAAAGAGGCCAGGGATGCCGGCGACGGTTGTGTCGCAGGTTAGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489742.1 |
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| CDS CAA 72 bp | CAGCCGTCGGTCGGGTGGATTGAATTCGCCCCCTGCTaGACCTTTCCAGACGCCCGACAGAAGGCTCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: QPSVGWIEFAPC*TFPDARQKALY Trigger: GTAGAGAGCCTTCTGTCGGGCGTCTGGAAAGGTCAAGCAGGGGGCGAATTCAATCCACCCGACCGACGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655728.1 |
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| CDS CAA 90 bp | TCAGTTGGTCAGCCGTCGGTCGGGTGGATTGAATTCGCCCCCTGCTaGACCTTTCCAGACGCCCGACAGAAGGCTCTCTACGCTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVGQPSVGWIEFAPC*TFPDARQKALYAPS Trigger: AGAGGGAGCGTAGAGAGCCTTCTGTCGGGCGTCTGGAAAGGTCAAGCAGGGGGCGAATTCAATCCACCCGACCGACGGCTGACCAACTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655728.1 |
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| CDS TCA 72 bp | TCTTCAGTCAGTTGGTCAGCCGTCGGTCGGGTGGATTaGATTCGCCCCCTGCTTGACCTTTCCAGACGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSVSWSAVGRVD*IRPLLDLSRRP Trigger: CGGGCGTCTGGAAAGGTCAAGCAGGGGGCGAATTCAATCCACCCGACCGACGGCTGACCAACTGACTGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655728.1 |
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| CDS GCA 72 bp | CAAGACCGACTTTCAGAAGGCAGTCACTCCGGAGCCTaGTTCCCTCCGGCGGTGAACAAGAAACGCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: QDRLSEGSHSGA*FPPAVNKKRLV Trigger: TACAAGGCGTTTCTTGTTCACCGCCGGAGGGAAGCAGGCTCCGGAGTGACTGCCTTCTGAAAGTCGGTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668667.1 |
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| CDS TCA 72 bp | ACTCTTAAAGCCTACTCAGTGGTGGGATCGTGCCAGTaGACAGCCACTGCACTTCAGCCTGGCCAAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: TLKAYSVVGSCQ*TATALQPGQTV Trigger: TACAGTTTGGCCAGGCTGAAGTGCAGTGGCTGTTCACTGGCACGATCCCACCACTGAGTAGGCTTTAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482532.5 ENST00000670593.1 |
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| CDS GCA 72 bp | GTTGTGCAAAGTGAGATGCTATGTACAAAGCTAACCTaGGACACAACCGTCGCCGGCATCCCTGGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VVQSEMLCTKLT*DTTVAGIPGLF Trigger: AAAGAGGCCAGGGATGCCGGCGACGGTTGTGTCGCAGGTTAGCTTTGTACATAGCATCTCACTTTGCACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489742.1 |
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| CDS CAA 72 bp | TCCCAGCTACTTGGGAGACTGAGCCAGGAGAATTGCTaGAAGTTGGACAGCAAAGGTTGCAGTGAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SQLLGRLSQENC*KLDSKGCSEPR Trigger: TCTTGGCTCACTGCAACCTTTGCTGTCCAACTTCAAGCAATTCTCCTGGCTCAGTCTCCCAAGTAGCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409563.5 |
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| CDS TCA 72 bp | GTTGAGCTAAATGTGTGGCAGACACTGCAGCCTGTGTaGAAGTTGAAGGATCCCGTACTCTGTACAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VELNVWQTLQPV*KLKDPVLCTGR Trigger: CCTTCCTGTACAGAGTACGGGATCCTTCAACTTTCACACAGGCTGCAGTGTCTGCCACACATTTAGCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS CAA 72 bp | CTACTTGGGAGACTGAGCCAGGAGAATTGCTTGAAGTaGGACAGCAAAGGTTGCAGTGAGCCAAGATCATGC | + |
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Preference number: 6 (lower is better) Translates to: LLGRLSQENCLK*DSKGCSEPRSC Trigger: GCATGATCTTGGCTCACTGCAACCTTTGCTGTCCAACTTCAAGCAATTCTCCTGGCTCAGTCTCCCAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409563.5 |
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| CDS TCA 72 bp | GTCAGTTGGTCAGCCTTGCAGGGTTGTTGTGCAAAGTaGGATGCTATGTACAAAGCTAACCATGCTGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VSWSALQGCCAK*DAMYKANHAAS Trigger: GCTTGCAGCATGGTTAGCTTTGTACATAGCATCTCACTTTGCACAACAACCCTGCAAGGCTGACCAACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456319.6 |
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| CDS TCA 72 bp | GTCAGTTGGTCAGCCTTGCAGGGTTGTTGTGCAAAGTaGGATGCTATGTACAAAGCTAACCTGCGACACAAC | + |
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Preference number: 6 (lower is better) Translates to: VSWSALQGCCAK*DAMYKANLRHN Trigger: GTTGTGTCGCAGGTTAGCTTTGTACATAGCATCTCACTTTGCACAACAACCCTGCAAGGCTGACCAACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489742.1 |
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| CDS CAA 72 bp | AATAGGGACAGGGGCTCTTCAAAGGCATCCATCCAATaGTTACAAGACCGACTTTCAGAAGGCAGTCACTCC | + |
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Preference number: 6 (lower is better) Translates to: NRDRGSSKASIQ*LQDRLSEGSHS Trigger: GGAGTGACTGCCTTCTGAAAGTCGGTCTTGTAACAATTGGATGGATGCCTTTGAAGAGCCCCTGTCCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668667.1 |
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| CDS GCA 72 bp | CCTTCTAATACATCACTAGATTACATGGAAACCTCCTaGTGGTGCAACACTCCAGACTACCTGGCTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: PSNTSLDYMETS*WCNTPDYLASF Trigger: GAATGAAGCCAGGTAGTCTGGAGTGTTGCACCAGCAGGAGGTTTCCATGTAATCTAGTGATGTATTAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482532.5 |
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| CDS CCA 72 bp | TTCCTCCCTAGACCTCCTGTACTAGAATGTTCATTTTaGAGAACCATAGGTGATCTGTCAACACTAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FLPRPPVLECSF*RTIGDLSTLRS Trigger: GCTCCTTAGTGTTGACAGATCACCTATGGTTCTCCAAAATGAACATTCTAGTACAGGAGGTCTAGGGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 72 bp | TCCTGTACTAGAATGTTCATTTTGGAGAACCATAGGTaGTCTGTCAACACTAAGGAGCACGACCCCGTATTA | + |
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Preference number: 6 (lower is better) Translates to: SCTRMFILENHR*SVNTKEHDPVL Trigger: TAATACGGGGTCGTGCTCCTTAGTGTTGACAGATCACCTATGGTTCTCCAAAATGAACATTCTAGTACAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 72 bp | AGAACCAAATCCCCAAATGACTGGCTCCTCTGTCACTaGAGCTGCTCTGTGGAACATAATTCAAAATTACAG | + |
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Preference number: 6 (lower is better) Translates to: RTKSPNDWLLCH*SCSVEHNSKLQ Trigger: CTGTAATTTTGAATTATGTTCCACAGAGCAGCTTCAGTGACAGAGGAGCCAGTCATTTGGGGATTTGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000482532.5 ENST00000670593.1 |
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| CDS GCA 72 bp | AAGCTGAGAAAATTTATGCAAACTAAATCCACAAGGTaGAACCCAGCGACAGATGCAGCGGACATCACTTTA | + |
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Preference number: 6 (lower is better) Translates to: KLRKFMQTKSTR*NPATDAADITL Trigger: TAAAGTGATGTCCGCTGCATCTGTCGCTGGGTTGCACCTTGTGGATTTAGTTTGCATAAATTTTCTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS CCA 72 bp | TGGAAACCTCCTGCTGGTGCAACACTCCAGACTACCTaGCTTCATTCACCATTTACAGATAAACTAAAACAA | + |
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Preference number: 6 (lower is better) Translates to: WKPPAGATLQTT*LHSPFTDKLKQ Trigger: TTGTTTTAGTTTATCTGTAAATGGTGAATGAAGCCAGGTAGTCTGGAGTGTTGCACCAGCAGGAGGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482532.5 |
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| CDS CCA 72 bp | CAAATGACTGGCTCCTCTGTCACTGAAGCTGCTCTGTaGAACATAATTCAAAATTACAGACCTAACCTACAC | + |
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Preference number: 6 (lower is better) Translates to: QMTGSSVTEAAL*NIIQNYRPNLH Trigger: GTGTAGGTTAGGTCTGTAATTTTGAATTATGTTCCACAGAGCAGCTTCAGTGACAGAGGAGCCAGTCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482532.5 ENST00000670593.1 |
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| CDS TCA 72 bp | ATTAAGCACCCAAGAGACCAAATTACTCACATAACCTaGAAGCTCTCAATTTTGCTTGGAAGGTTGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: IKHPRDQITHIT*KLSILLGRLRS Trigger: GCTTCTCAACCTTCCAAGCAAAATTGAGAGCTTTCAGGTTATGTGAGTAATTTGGTCTCTTGGGTGCTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 72 bp | CTAAAGTCCAAATCCTCCGCCAACAAATATTTGGTGTaGAGTCAGTCACAGATTGTTTACCCAAGGAATAAG | + |
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Preference number: 6 (lower is better) Translates to: LKSKSSANKYLV*SQSQIVYPRNK Trigger: CTTATTCCTTGGGTAAACAATCTGTGACTGACTTCACACCAAATATTTGTTGGCGGAGGATTTGGACTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 72 bp | TTTACTTACCTAATCACCCTGCACTCAAAGTCCTCTTaGAGCAATCCCGTTTTCAATGAGCATATGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: FTYLITLHSKSS*SNPVFNEHMLI Trigger: AATCAACATATGCTCATTGAAAACGGGATTGCTTCAAGAGGACTTTGAGTGCAGGGTGATTAGGTAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS TCA 72 bp | GTATATACATCCATGAAGCAACTGCTTATGGGGTATTaGGAAGCACAGACAAGAAATAGCCTCCTATCTAAA | + |
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Preference number: 6 (lower is better) Translates to: VYTSMKQLLMGY*EAQTRNSLLSK Trigger: TTTAGATAGGAGGCTATTTCTTGTCTGTGCTTCTCAATACCCCATAAGCAGTTGCTTCATGGATGTATATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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| CDS CCA 72 bp | TCCTACATGCCATTCAAAAGTATGCATGAATACTGTTaGAGTTTATCTAGTGAAAGGTGGTGTTCTTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SYMPFKSMHEYC*SLSSERWCSYL Trigger: CAGATAAGAACACCACCTTTCACTAGATAAACTCCAACAGTATTCATGCATACTTTTGAATGGCATGTAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460218.5 |
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