Pregenerated sensors for CALHM6 (Homo sapiens)
Ensembl gene IDs: ENSG00000188820Ensembl transcript IDs: ENST00000368604.2, ENST00000368605.3, ENST00000368606.7
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTTGCGGCCGAGGCACAGGCGCTGCGCGAAGGCCGCGCTCCCGGTaGCCGCGCACTCGTAAAAGGCGCCCCCGAGCAGCGCCACGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GCGRGTGAARRPRSR*PRTRKRRPRAAPRP Trigger: TGGCCGTGGCGCTGCTCGGGGGCGCCTTTTACGAGTGCGCGGCCACCGGGAGCGCGGCCTTCGCGCAGCGCCTGTGCCTCGGCCGCAACC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 90 bp | CGCGCGGGCGCTGGAGCAGCATCCGGTGAGCAGGCGCCACGTGCGTaGGCTCAGCACGTAGCCCAGGAGGAAGAGCGCGAGCGCCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: RAGAGAASGEQAPRA*AQHVAQEEERERRH Trigger: GTGCCGGCGCTCGCGCTCTTCCTCCTGGGCTACGTGCTGAGCGCACGCACGTGGCGCCTGCTCACCGGATGCTGCTCCAGCGCCCGCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS TCA 90 bp | GCAGCGCCGATCCGCAACTCGCGCGGGCGCTGGAGCAGCATCCGGTaGGCAGGCGCCACGTGCGTGCGCTCAGCACGTAGCCCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: AAPIRNSRGRWSSIR*AGATCVRSARSPGG Trigger: TCCTCCTGGGCTACGTGCTGAGCGCACGCACGTGGCGCCTGCTCACCGGATGCTGCTCCAGCGCCCGCGCGAGTTGCGGATCGGCGCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 90 bp | CAGGCCGTAGGGCAGGTTCCAGGCGGCGCTGCACGGGCACTGGAATaGCACGGCGGAGAAGATGCGCTCCCCGCCCGCCGTCAGCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QAVGQVPGGAARALE*HGGEDALPARRQQG Trigger: ACCCTGCTGACGGCGGGCGGGGAGCGCATCTTCTCCGCCGTGGCATTCCAGTGCCCGTGCAGCGCCGCCTGGAACCTGCCCTACGGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 90 bp | GCACCAGCAAGAAGACCAGGCCGTAGGGCAGGTTCCAGGCGGCGCTaGACGGGCACTGGAATGCCACGGCGGAGAAGATGCGCTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: APARRPGRRAGSRRR*TGTGMPRRRRCAPR Trigger: GCGGGGAGCGCATCTTCTCCGCCGTGGCATTCCAGTGCCCGTGCAGCGCCGCCTGGAACCTGCCCTACGGCCTGGTCTTCTTGCTGGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS CCA 72 bp | CGAGGCACAGGCGCTGCGCGAAGGCCGCGCTCCCGGTaGCCGCGCACTCGTAAAAGGCGCCCCCGAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RGTGAARRPRSR*PRTRKRRPRAA Trigger: CGCTGCTCGGGGGCGCCTTTTACGAGTGCGCGGCCACCGGGAGCGCGGCCTTCGCGCAGCGCCTGTGCCTCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS CAA 72 bp | CCAGGTGAGGGGCGCGAGCGCGGCGGCCGCGCTGATTaGCGTGCACACCAGGGAGCCGCGCAGCGCCGATCC | + |
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Preference number: 6 (lower is better) Translates to: PGEGRERGGRAD*RAHQGAAQRRS Trigger: GGATCGGCGCTGCGCGGCTCCCTGGTGTGCACGCAAATCAGCGCGGCCGCCGCGCTCGCGCCCCTCACCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 72 bp | GGGCAGGTTCCAGGCGGCGCTGCACGGGCACTGGAATaGCACGGCGGAGAAGATGCGCTCCCCGCCCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: GQVPGGAARALE*HGGEDALPARR Trigger: ACGGCGGGCGGGGAGCGCATCTTCTCCGCCGTGGCATTCCAGTGCCCGTGCAGCGCCGCCTGGAACCTGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 72 bp | CGCTGCACGGGCACTGGAATGCCACGGCGGAGAAGATaGGCTCCCCGCCCGCCGTCAGCAGGGTCACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RCTGTGMPRRRR*APRPPSAGSPG Trigger: GCCTGGTGACCCTGCTGACGGCGGGCGGGGAGCGCATCTTCTCCGCCGTGGCATTCCAGTGCCCGTGCAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS TCA 72 bp | ATCCGCAACTCGCGCGGGCGCTGGAGCAGCATCCGGTaGGCAGGCGCCACGTGCGTGCGCTCAGCACGTAGC | + |
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Preference number: 6 (lower is better) Translates to: IRNSRGRWSSIR*AGATCVRSARS Trigger: GCTACGTGCTGAGCGCACGCACGTGGCGCCTGCTCACCGGATGCTGCTCCAGCGCCCGCGCGAGTTGCGGAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 72 bp | GCTGGAGCAGCATCCGGTGAGCAGGCGCCACGTGCGTaGGCTCAGCACGTAGCCCAGGAGGAAGAGCGCGAG | + |
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Preference number: 6 (lower is better) Translates to: AGAASGEQAPRA*AQHVAQEEERE Trigger: CTCGCGCTCTTCCTCCTGGGCTACGTGCTGAGCGCACGCACGTGGCGCCTGCTCACCGGATGCTGCTCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS CCA 72 bp | TCAGATCCTTCAGGAGGTCCTGCACGTCCGACGCCTTaGCCTGGTTGCACGGCACCAGCGGCAGCTCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SDPSGGPARPTP*PGCTAPAAAPR Trigger: CCGCGGAGCTGCCGCTGGTGCCGTGCAACCAGGCCAAGGCGTCGGACGTGCAGGACCTCCTGAAGGATCTGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 72 bp | AGAAGACCAGGCCGTAGGGCAGGTTCCAGGCGGCGCTaGACGGGCACTGGAATGCCACGGCGGAGAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: RRPGRRAGSRRR*TGTGMPRRRRC Trigger: GCATCTTCTCCGCCGTGGCATTCCAGTGCCCGTGCAGCGCCGCCTGGAACCTGCCCTACGGCCTGGTCTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS CAA 72 bp | TTCAGATCCTTCAGGAGGTCCTGCACGTCCGACGCCTaGGCCTGGTTGCACGGCACCAGCGGCAGCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: FRSFRRSCTSDA*AWLHGTSGSSA Trigger: CGCGGAGCTGCCGCTGGTGCCGTGCAACCAGGCCAAGGCGTCGGACGTGCAGGACCTCCTGAAGGATCTGAA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS TCA 72 bp | GGGTCACCAGGCCGTAGCCCAAGGCGCTGTGGTGCTTaGCGTGCAGGTCCAGCACCGCCCGAAACTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GSPGRSPRRCGA*RAGPAPPETSP Trigger: TGGAGAAGTTTCGGGCGGTGCTGGACCTGCACGTCAAGCACCACAGCGCCTTGGGCTACGGCCTGGTGACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS GCA 72 bp | GTCCCCCGGGGCGTCGCGCACAGGCCCAGATCCTTCTaGCTCTTCGTTGTCGGGAAACATTATTCAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: VPRGVAHRPRSF*LFVVGKHYSRT Trigger: TGTCCTTGAATAATGTTTCCCGACAACGAAGAGGCAGAAGGATCTGGGCCTGTGCGCGACGCCCCGGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368605.3 |
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| CDS CAA 72 bp | TATACAGTGATGAAATTTGCTGCCACTCTTTCATGCTaGGAGTGTTATATTCTTTTGGATGCGAGCCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: YTVMKFAATLSC*ECYILLDASPQ Trigger: TTGAGGGCTCGCATCCAAAAGAATATAACACTCCAAGCATGAAAGAGTGGCAGCAAATTTCATCACTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368604.2 ENST00000368605.3 ENST00000368606.7 |
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