RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALHM5 (Homo sapiens)

Ensembl gene IDs: ENSG00000178033

Ensembl transcript IDs: ENST00000368599.4

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGATCACCCTTGGGCCACTGGAGACTCCTCACCTGGAGTTTTCTaGGGAATGCTCTCTCTTGGCTGCAATGGAAGCCCCAGAGCACAC +
Preference number: 1 (lower is better)
Translates to: EDHPWATGDSSPGVF*GMLSLGCNGSPRAH
Trigger: GTGTGCTCTGGGGCTTCCATTGCAGCCAAGAGAGAGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp ACCTCCTCTGGAGGATCACCCTTGGGCCACTGGAGACTCCTCACCTaGAGTTTTCTGGGGAATGCTCTCTCTTGGCTGCAATGGAAGCCC +
Preference number: 1 (lower is better)
Translates to: TSSGGSPLGHWRLLT*SFLGNALSWLQWKP
Trigger: GGGCTTCCATTGCAGCCAAGAGAGAGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp CAGTTCGGCAGTGTAACCTCCTCTGGAGGATCACCCTTGGGCCACTaGAGACTCCTCACCTGGAGTTTTCTGGGGAATGCTCTCTCTTGG +
Preference number: 1 (lower is better)
Translates to: QFGSVTSSGGSPLGH*RLLTWSFLGNALSW
Trigger: CCAAGAGAGAGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTGCCGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp CAAATCCAGGGTGCCAATGTCCCAGTTCGGCAGTGTAACCTCCTCTaGAGGATCACCCTTGGGCCACTGGAGACTCCTCACCTGGAGTTT +
Preference number: 1 (lower is better)
Translates to: QIQGANVPVRQCNLL*RITLGPLETPHLEF
Trigger: AAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTGCCGAACTGGGACATTGGCACCCTGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp CTGGGATTTGTACCATCAACTCCCCTGGTTCTCAGGCCCTCAGACTaGGACTTGAGCCACCCTACACATTTCCCTGATTCTCCAGCTTAC +
Preference number: 1 (lower is better)
Translates to: LGFVPSTPLVLRPSD*DLSHPTHFPDSPAY
Trigger: GTAAGCTGGAGAATCAGGGAAATGTGTAGGGTGGCTCAAGTCCCAGTCTGAGGGCCTGAGAACCAGGGGAGTTGATGGTACAAATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp CTTCTTCCAGAGGAGGAGGATGAGCTCTTCTGCTACTTACTAAGCTaGAGCAACAAGTACCCAGGCTGCTGGCTTCTTGCCAGTCAGCTT +
Preference number: 1 (lower is better)
Translates to: LLPEEEDELFCYLLS*SNKYPGCWLLASQL
Trigger: AAGCTGACTGGCAAGAAGCCAGCAGCCTGGGTACTTGTTGCTGCAGCTTAGTAAGTAGCAGAAGAGCTCATCCTCCTCCTCTGGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp GAACCTGTTAAGTGGCTTCTTCCAGAGGAGGAGGATGAGCTCTTCTaGTACTTACTAAGCTGCAGCAACAAGTACCCAGGCTGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: EPVKWLLPEEEDELF*YLLSCSNKYPGCWL
Trigger: AAGCCAGCAGCCTGGGTACTTGTTGCTGCAGCTTAGTAAGTAGCAGAAGAGCTCATCCTCCTCCTCTGGAAGAAGCCACTTAACAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp GACTTGAGCCACCCTACACATTTCCCTGATTCTCCAGCTTACAGGTaGCACGTCATGGGCCTTCTCAGCCTTCATAATCACATGAGCCAA +
Preference number: 1 (lower is better)
Translates to: DLSHPTHFPDSPAYR*HVMGLLSLHNHMSQ
Trigger: TTGGCTCATGTGATTATGAAGGCTGAGAAGGCCCATGACGTGCCACCTGTAAGCTGGAGAATCAGGGAAATGTGTAGGGTGGCTCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp TGCACTTTCCACCATGGAAGGACACTGAGAAGTCAGCAAGCAGTTTaGAACCTGGAAAATTGCTCTCACCAGAACCTGAGCATGCTGGCA +
Preference number: 1 (lower is better)
Translates to: CTFHHGRTLRSQQAV*NLENCSHQNLSMLA
Trigger: TGCCAGCATGCTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCAAACTGCTTGCTGACTTCTCAGTGTCCTTCCATGGTGGAAAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 90 bp CACGGAGCTTCCACGGCCCCTTTGGGCTCACCACTCCTCATGTATTaGGCAATGCAGAAGCTCTCTGAACCTTGTCCTTTAGATTTTTAT +
Preference number: 1 (lower is better)
Translates to: HGASTAPLGSPLLMY*AMQKLSEPCPLDFY
Trigger: ATAAAAATCTAAAGGACAAGGTTCAGAGAGCTTCTGCATTGCTCAATACATGAGGAGTGGTGAGCCCAAAGGGGCCGTGGAAGCTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp AAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATGGCTaGAATGATTTGATTAGGGCCATAGATCTGGGGCCTTTTATTCTC +
Preference number: 1 (lower is better)
Translates to: KPAASTGVGQMFGDG*NDLIRAIDLGPFIL
Trigger: GAGAATAAAAGGCCCCAGATCTATGGCCCTAATCAAATCATTGCAGCCATCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp CTGCAGCAACAAGTACCCAGGCTGCTGGCTTCTTGCCAGTCAGCTTaGGTTTTCTTGAATGAGGCAGTCATTGTCATGAGCGTAAGTTTT +
Preference number: 1 (lower is better)
Translates to: LQQQVPRLLASCQSA*VFLNEAVIVMSVSF
Trigger: AAAACTTACGCTCATGACAATGACTGCCTCATTCAAGAAAACCCAAGCTGACTGGCAAGAAGCCAGCAGCCTGGGTACTTGTTGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp TTGGCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTaGGATTTGTACCATCAACTCCCCTGGTTCTCAGGCCCTCAGACT +
Preference number: 1 (lower is better)
Translates to: LALGNKNFRFLCLWL*DLYHQLPWFSGPQT
Trigger: AGTCTGAGGGCCTGAGAACCAGGGGAGTTGATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 90 bp TCTCCACCAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTaGGCACATCCTGATGTTCCACTTGAGAGCTTCAAAGCAGTTTCC +
Preference number: 1 (lower is better)
Translates to: SPPMQEHLCHPSASI*AHPDVPLESFKAVS
Trigger: GGAAACTGCTTTGAAGCTCTCAAGTGGAACATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTGGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 90 bp TCCCTAATCCCTGTTCTGTCCCTGCCACATACACACACAGACGTCTaGCCCTGCACCTCCAAGTTCCCAAAGATATTGTACGTAGAAAAA +
Preference number: 1 (lower is better)
Translates to: SLIPVLSLPHTHTDV*PCTSKFPKILYVEK
Trigger: TTTTTCTACGTACAATATCTTTGGGAACTTGGAGGTGCAGGGTCAGACGTCTGTGTGTGTATGTGGCAGGGACAGAACAGGGATTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 90 bp AATGCTCAAGGGAGCTTATTTGCACTTTCCACCATGGAAGGACACTaGGAAGTCAGCAAGCAGTTTGCAACCTGGAAAATTGCTCTCACC +
Preference number: 1 (lower is better)
Translates to: NAQGSLFALSTMEGH*EVSKQFATWKIALT
Trigger: GGTGAGAGCAATTTTCCAGGTTGCAAACTGCTTGCTGACTTCTCAGTGTCCTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp TCTAGATACCCATTCCCTCAAGATACTCAAGAGCAGACACCAATTTaGTCTCCCTATCTTACTCCACTGCCTCCAGGACTATTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: SRYPFPQDTQEQTPI*SPYLTPLPPGLFVG
Trigger: TCCCACAAATAGTCCTGGAGGCAGTGGAGTAAGATAGGGAGAGCAAATTGGTGTCTGCTCTTGAGTATCTTGAGGGAATGGGTATCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp GGTCCAGACATTGTGATTGTCAAAGGCCCCCAGGTGATTCCAATTTaGAGCCAACATCGAGAGCTACTGACAAACACAGATAGATGCTTT +
Preference number: 1 (lower is better)
Translates to: GPDIVIVKGPQVIPI*SQHRELLTNTDRCF
Trigger: AAAGCATCTATCTGTGTTTGTCAGTAGCTCTCGATGTTGGCTGCAAATTGGAATCACCTGGGGGCCTTTGACAATCACAATGTCTGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp TCTCCTTATCTATTGGCCCTTGGAAATAAAAACTTCAGGTTCCTTTaGCTTTGGCTCTGGGATTTGTACCATCAACTCCCCTGGTTCTCA +
Preference number: 1 (lower is better)
Translates to: SPYLLALGNKNFRFL*LWLWDLYHQLPWFS
Trigger: TGAGAACCAGGGGAGTTGATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAATAGATAAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp CTCCACTCGAGTTGGGTCACCAATCTTTTCTCTGTCTCCTGGAGTTaGGTCACCAATATTCTCCTTATCTATTGGCCCTTGGAAATAAAA +
Preference number: 1 (lower is better)
Translates to: LHSSWVTNLFSVSWS*VTNILLIYWPLEIK
Trigger: TTTTATTTCCAAGGGCCAATAGATAAGGAGAATATTGGTGACCCAACTCCAGGAGACAGAGAAAAGATTGGTGACCCAACTCGAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp CCAATTTGCAGCCAACATCGAGAGCTACTGACAAACACAGATAGATaGTTTCCATCCAACCTCTCATGCCAACCTCTTAGCTTTTTCTTA +
Preference number: 1 (lower is better)
Translates to: PICSQHRELLTNTDR*FPSNLSCQPLSFFL
Trigger: TAAGAAAAAGCTAAGAGGTTGGCATGAGAGGTTGGATGGAAAGCATCTATCTGTGTTTGTCAGTAGCTCTCGATGTTGGCTGCAAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp TGCCTTATAAAAATGCTCAAGGGAGCTTATTTGCACTTTCCACCATaGAAGGACACTGAGAAGTCAGCAAGCAGTTTGCAACCTGGAAAA +
Preference number: 1 (lower is better)
Translates to: CLIKMLKGAYLHFPP*KDTEKSASSLQPGK
Trigger: TTTTCCAGGTTGCAAACTGCTTGCTGACTTCTCAGTGTCCTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGAGCATTTTTATAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 90 bp TCACAAGCAGTAGGTTCCAAAGTTACTCACATCTTCTATCTGACGTaGCTACAAAGCAGAGGTTCCCATGATTTCCTTCTCAGATTTCAC +
Preference number: 1 (lower is better)
Translates to: SQAVGSKVTHIFYLT*LQSRGSHDFLLRFH
Trigger: GTGAAATCTGAGAAGGAAATCATGGGAACCTCTGCTTTGTAGCCACGTCAGATAGAAGATGTGAGTAACTTTGGAACCTACTGCTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 90 bp TTTGGGCTCACCACTCCTCATGTATTGAGCAATGCAGAAGCTCTCTaGACCTTGTCCTTTAGATTTTTATGGGAAGCTTTATTCTTAGGC +
Preference number: 1 (lower is better)
Translates to: FGLTTPHVLSNAEAL*TLSFRFLWEALFLG
Trigger: GCCTAAGAATAAAGCTTCCCATAAAAATCTAAAGGACAAGGTTCAGAGAGCTTCTGCATTGCTCAATACATGAGGAGTGGTGAGCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 90 bp TCTCCTTTATTCTCCTTTCTTAATACTGTTAATCTGTGGGGAGACTaGGTCATCTGTAAAATGGAATGTTCTGTTAGATCTAGATGTACC +
Preference number: 1 (lower is better)
Translates to: SPLFSFLNTVNLWGD*VICKMECSVRSRCT
Trigger: GGTACATCTAGATCTAACAGAACATTCCATTTTACAGATGACTCAGTCTCCCCACAGATTAACAGTATTAAGAAAGGAGAATAAAGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 90 bp GGTGGAGAGATTTTAGAGACCTACTTATCAGCATCTATCAAATCATaGTGTAGATGCTATACTGCTAACTGGAACCTAAAGAAAAAGAAA +
Preference number: 1 (lower is better)
Translates to: GGEILETYLSASIKS*CRCYTANWNLKKKK
Trigger: TTTCTTTTTCTTTAGGTTCCAGTTAGCAGTATAGCATCTACAGCATGATTTGATAGATGCTGATAAGTAGGTCTCTAAAATCTCTCCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp CCAATGTCCCAGTTCGGCAGTGTAACCTCCTCTGGAGGATCACCCTaGGGCCACTGGAGACTCCTCACCTGGAGTTTTCTGGGGAATGCT +
Preference number: 2 (lower is better)
Translates to: PMSQFGSVTSSGGSP*GHWRLLTWSFLGNA
Trigger: AGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTGCCGAACTGGGACATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAAGCATGCTGGCAGCCTaGCCTCGGACTTCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRSMLAA*PRTSQP
Trigger: AGGCTGGGAAGTCCGAGGTCAGGCTGCCAGCATGCT...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGCACAGGAACAGGTTTaGGGGAAGGGGCACGGAGCT +
Preference number: 2 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSAQEQV*GKGHGA
Trigger: AGCTCCGTGCCCCTTCCCCCAAACCTGTTCCTGTGC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATCCCTGTTCTGTCCCTaGCACATACACACACAGACG +
Preference number: 2 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRSLFCP*HIHTQT
Trigger: CGTCTGTGTGTGTATGTGGCAGGGACAGAACAGGGA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAAGGCTGCTGGCTTCTTaGCAGTCAGCTTGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRRLLAS*QSAWVF
Trigger: GAAAACCCAAGCTGACTGGCAAGAAGCCAGCAGCCT...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGGCCTTGAGAAGTAATTaGGTCATGAAGGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: QLPVSGAASREHIQRQLMALRSN*VMKVEP
Trigger: AGGCTCCACCTTCATGACCCAATTACTTCTCAAGGC...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACACACACACAGACGTCTaGCCCTGCACCTCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: KEASASASSYMSFSSSEDTHTDV*PCTSKF
Trigger: GAACTTGGAGGTGCAGGGTCAGACGTCTGTGTGTGT...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGGAGCAGACACCAATTTaGTCTCCCTATCTTACTCCA +
Preference number: 2 (lower is better)
Translates to: QLPVSGAASREHIQRQLMEQTPI*SPYLTP
Trigger: TGGAGTAAGATAGGGAGAGCAAATTGGTGTCTGCTC...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp TTGCACTTTCCACCATGGAAGGACACTGAGAAGTCAGCAAGCAGTTaGCAACCTGGAAAATTGCTCTCACCAGAACCTGAGCATGCTGGC +
Preference number: 2 (lower is better)
Translates to: LHFPPWKDTEKSASS*QPGKLLSPEPEHAG
Trigger: GCCAGCATGCTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCAAACTGCTTGCTGACTTCTCAGTGTCCTTCCATGGTGGAAAGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACGACAGAGACTCCTGCTaGTCACACTGCAGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYDRDSC*SHCRSH
Trigger: GTGGCTCCTGCAGTGTGATCAGCAGGAGTCTCTGTC...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGGAGATCTTCAGATCCTaGGGGAATGAATTCCACAAT +
Preference number: 2 (lower is better)
Translates to: QLPVSGAASREHIQRQLMEIFRS*GNEFHN
Trigger: ATTGTGGAATTCATTCCCTCAGGATCTGAAGATCTC...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGACTCACATCTTCTATCTaGCGTGGCTACAAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRLTSSI*RGYKAE
Trigger: CTCTGCTTTGTAGCCACGTCAGATAGAAGATGTGAG...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTGCCCCTCTCCACCAATaGAAGAGCACCTTTGTCACC +
Preference number: 2 (lower is better)
Translates to: GPHILKSLLSKPVHPAASAPLHQ*KSTFVT
Trigger: GGTGACAAAGGTGCTCTTGCATTGGTGGAGAGGGGC...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAGAGTTTTCTGGGGAATaGTCTCTCTTGGCTGCAATG +
Preference number: 2 (lower is better)
Translates to: GLLYKACSLHWSGSNVWREFSGE*SLLAAM
Trigger: CATTGCAGCCAAGAGAGAGCATTCCCCAGAAAACTC...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTaGTACCATCAACTCCCCTGGTTCTCAGGCCCTCAGACTGGGACT +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWD*YHQLPWFSGPQTGT
Trigger: AGTCCCAGTCTGAGGGCCTGAGAACCAGGGGAGTTGATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATCTCTCCCTTTATTCTaGAAACTCTACCCCCTCACA +
Preference number: 2 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRSLPLF*KLYPLT
Trigger: TGTGAGGGGGTAGAGTTTTCAGAATAAAGGGAGAGA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGCACACAGGTTGCTGGTaGTACGTTAGGAGGATCACA +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMHTGCW*YVRRIT
Trigger: TGTGATCCTCCTAACGTATCACCAGCAACCTGTGTG...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTTGCCACCAACTGTGTaGGTTTTCTCCCACACTGGC +
Preference number: 2 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYLPPTV*VFSHTG
Trigger: GCCAGTGTGGGAGAAAACCCACACAGTTGGTGGCAA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGGGGAATGCTCTCTCTTaGCTGCAATGGAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQGNALS*LQWKPQ
Trigger: CTGGGGCTTCCATTGCAGCCAAGAGAGAGCATTCCC...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTCACCTGGAGTTTTCTaGGGAATGCTCTCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMSPGVF*GMLSLG
Trigger: GCCAAGAGAGAGCATTCCCCAGAAAACTCCAGGTGA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGCAGTGTAACCTCCTCTaGAGGATCACCCTTGGGCCA +
Preference number: 2 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQQCNLL*RITLGP
Trigger: TGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTG...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGCCACTCCTCATGTATTaGGCAATGCAGAAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMPLLMY*AMQKLS
Trigger: AGAGAGCTTCTGCATTGCTCAATACATGAGGAGTGG...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGAAAGTCCCTGGACTTaGGGGTGGCAGGAATATCCC +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHESPWT*GWQEYP
Trigger: GGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTGCAACCTGGAAAATTaGTCTCACCAGAACCTGAGC +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMCNLEN*SHQNLS
Trigger: GCTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCATCATGTATTGAGCAATaGAGAAGCTCTCTGAACCTT +
Preference number: 2 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSSCIEQ*RSSLNL
Trigger: AAGGTTCAGAGAGCTTCTGCATTGCTCAATACATGA...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGACACTGAACACTCCTTaGCACCAACTGTGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMTLNTP*HQLCGF
Trigger: AAACCCACACAGTTGGTGGCAAGGAGTGTTCAGTGT...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTGCTACTTACTAAGCTaGAGCAACAAGTACCCAGGC +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMCYLLS*SNKYPG
Trigger: GCCTGGGTACTTGTTGCTGCAGCTTAGTAAGTAGCA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGAGGATGAGCTCTTCTaGTACTTACTAAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMEDELF*YLLSCS
Trigger: GCTGCAGCTTAGTAAGTAGCAGAAGAGCTCATCCTC...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTATTCAAATCCAGGGTaGCAATGTCCCAGTTCGGCA +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMYSNPG*QCPSSA
Trigger: TGCCGAACTGGGACATTGGCACCCTGGATTTGAATA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAACTCTCTTGGCTGCAATaGAAGCCCCAGAGCACACTT +
Preference number: 2 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKLSWLQ*KPQSTL
Trigger: AAGTGTGCTCTGGGGCTTCCATTGCAGCCAAGAGAG...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTGGAGACTCCTCACCTaGAGTTTTCTGGGGAATGCT +
Preference number: 2 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYWRLLT*SFLGNA
Trigger: AGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAGGAGGATCACAGAATaGGCATGCCACTCAACACCA +
Preference number: 2 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKRRITE*ACHSTP
Trigger: TGGTGTTGAGTGGCATGCTCATTCTGTGATCCTCCT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAATGAGCCCTCTCACATaGGTCTGTCTGTTGAATGAT +
Preference number: 2 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRMSPLT*VCLLND
Trigger: ATCATTCAACAGACAGACTCATGTGAGAGGGCTCAT...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTCAAGGGAGCTTATTTaGACTTTCCACCATGGAAGG +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMSRELI*TFHHGR
Trigger: CCTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTCTTGCCAGTCAGCTTaGGTTTTCTTGAATGAGGCA +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMSCQSA*VFLNEA
Trigger: TGCCTCATTCAAGAAAACCCAAGCTGACTGGCAAGA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp CCCATAGGTCAAGCTGAGGCTGAAGTCCCAGAATTTCCTCTGGGATaGATTGAGACTCCACTTGTAACTGCATTCTTTCTTGTGTTTATC +
Preference number: 2 (lower is better)
Translates to: PIGQAEAEVPEFPLG*IETPLVTAFFLVFI
Trigger: GATAAACACAAGAAAGAATGCAGTTACAAGTGGAGTCTCAATCAATCCCAGAGGAAATTCTGGGACTTCAGCCTCAGCTTGACCTATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp GTCTCCTGGAGTTGGGTCACCAATATTCTCCTTATCTATTGGCCCTaGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATT +
Preference number: 2 (lower is better)
Translates to: VSWSWVTNILLIYWP*EIKTSGSFAFGSGI
Trigger: AATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAATAGATAAGGAGAATATTGGTGACCCAACTCCAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp AGCCACAAACATTTATTTAAGCTCATGATTTTTGGGGTCATGGAGTaGGATAGGACATGGCAAGGACTTCTCTACAAAGCCTGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SHKHLFKLMIFGVME*DRTWQGLLYKACSL
Trigger: GAGGCTGCAGGCTTTGTAGAGAAGTCCTTGCCATGTCCTATCCAACTCCATGACCCCAAAAATCATGAGCTTAAATAAATGTTTGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGTGATTTTTGAGAACTaGGATCTTCAGATCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SPRTLPYASSLDLEETVMVIFEN*DLQILR
Trigger: CCTCAGGATCTGAAGATCTCAGTTCTCAAAAATCAC...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTAAGCAGAGGTTCCCATaGTTTCCTTCTCAGATTTCA +
Preference number: 2 (lower is better)
Translates to: GPHILKSLLSKPVHPAASKQRFP*FPSQIS
Trigger: TGAAATCTGAGAAGGAAATCATGGGAACCTCTGCTT...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAATATCCCCCAGATATaGCTCCTCAATCCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKNIPQI*LLNPQL
Trigger: GAGCTGAGGATTGAGGAGTCATATCTGGGGGATATT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGCGGTAGCAGTTTTCTaGTACCCAGTGACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHAVAVF*YPVTSG
Trigger: TCCAGAAGTCACTGGGTAGCAGAAAACTGCTACCGC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGGAGGATGGGCAAATTTaGTCTCTGTCTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQEDGQI*SLSLSL
Trigger: GAGAGAGAGAGACAGAGAGCAAATTTGCCCATCCTC...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACATCTTCTATCTGACGTaGCTACAAAGCAGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYIFYLT*LQSRGS
Trigger: GGAACCTCTGCTTTGTAGCCACGTCAGATAGAAGAT...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp TCTGATAAATGTAAGACTGCAATGCAGTTTTATGCCAGTACTGCTTaGGACAGTGTCCCCAGACCTTTAGCCAAGGTCAATTTACCCTAC +
Preference number: 2 (lower is better)
Translates to: SDKCKTAMQFYASTA*DSVPRPLAKVNLPY
Trigger: GTAGGGTAAATTGACCTTGGCTAAAGGTCTGGGGACACTGTCCAAAGCAGTACTGGCATAAAACTGCATTGCAGTCTTACATTTATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGACAGATCCTGAGGGAATaGATTCCACAATTTCATACA +
Preference number: 2 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRQILRE*IPQFHT
Trigger: TGTATGAAATTGTGGAATTCATTCCCTCAGGATCTG...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACATCATTATCCATTTGTaGTCGACTCAACCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYIIIHL*STQPSA
Trigger: GGCTGAAGGTTGAGTCGATCACAAATGGATAATGAT...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTTGGGTTTTCTTGAATaGGGCAGTCATTGTCATGAG +
Preference number: 2 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYLGFLE*GSHCHE
Trigger: CTCATGACAATGACTGCCTCATTCAAGAAAACCCAA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTGGCAAACATTAGTATaGCCATTGGGTGCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHWQTLV*PLGALS
Trigger: AGAGAGGGCACCCAATGGTCATACTAATGTTTGCCA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAATGCAATGCAGTTTTATaGCAGTACTGCTTTGGACAG +
Preference number: 2 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKCNAVL*QYCFGQ
Trigger: CTGTCCAAAGCAGTACTGGCATAAAACTGCATTGCA...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGGTTTTCTCCCACACTaGCCAATTCTCCAATACCAA +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHGFLPH*PILQYQ
Trigger: TTGGTATTGGAGAATTGGCCAGTGTGGGAGAAAACC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp TTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGTTCCACTaGAGAGCTTCAAAGCAGTTTCCTTTGTGTTATTGTCTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: FVTPQHQFEHILMFH*RASKQFPLCYCLVN
Trigger: GTTTACAAGACAATAACACAAAGGAAACTGCTTTGAAGCTCTCAAGTGGAACATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGCTACCCAGTGACTTCTaGATTGCTTTAACCAGTTTT +
Preference number: 2 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQLPSDF*IALTSF
Trigger: AAAACTGGTTAAAGCAATCCAGAAGTCACTGGGTAG...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATCCCAATTTCATATGTTaGAATCTTAACCCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHPNFIC*NLNPQA
Trigger: AGCTTGGGGGTTAAGATTTCAACATATGAAATTGGG...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATAATGCAGAAGCTCTCTaGACCTTGTCCTTTAGATTT +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHNAEAL*TLSFRF
Trigger: AAATCTAAAGGACAAGGTTCAGAGAGCTTCTGCATT...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGCAACTTGTGATTTTTaGGAACTGAGATCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHATCDF*ELRSSD
Trigger: ATCTGAAGATCTCAGTTCTCAAAAATCACAAGTTGC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGCCTTCATAATCACATaGGCCAATTTCCACAATAAA +
Preference number: 2 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHAFIIT*ANFHNK
Trigger: TTTATTGTGGAAATTGGCTCATGTGATTATGAAGGC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR GCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGACTCCACTTGTAACTaGATTCTTTCTTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKDSTCN*ILSCVY
Trigger: ATAAACACAAGAAAGAATGCAGTTACAAGTGGAGTC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 90 bp ATGAATTCCGTGTACCTACCATCCAGCTTCAATAGTTTCCATATTTaGCCAATCTTATTTCATCTTTCAGCTTTCTCCCTAAACTCTTTT +
Preference number: 2 (lower is better)
Translates to: MNSVYLPSSFNSFHI*PILFHLSAFSLNSF
Trigger: AAAAGAGTTTAGGGAGAAAGCTGAAAGATGAAATAAGATTGGCAAAATATGGAAACTATTGAAGCTGGATGGTAGGTACACGGAATTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp GGTGCCAATGTCCCAGTTCGGCAGTGTAACCTCCTCTaGAGGATCACCCTTGGGCCACTGGAGACTCCTCAC +
Preference number: 3 (lower is better)
Translates to: GANVPVRQCNLL*RITLGPLETPH
Trigger: GTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTGCCGAACTGGGACATTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp GGAGGATCACCCTTGGGCCACTGGAGACTCCTCACCTaGAGTTTTCTGGGGAATGCTCTCTCTTGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: GGSPLGHWRLLT*SFLGNALSWLQ
Trigger: TTGCAGCCAAGAGAGAGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp CTCAGACTGGGACTTGAGCCACCCTACACATTTCCCTaGTTCTCCAGCTTACAGGTGGCACGTCATGGGCCT +
Preference number: 3 (lower is better)
Translates to: LRLGLEPPYTFP*FSSLQVARHGP
Trigger: AGGCCCATGACGTGCCACCTGTAAGCTGGAGAATCAGGGAAATGTGTAGGGTGGCTCAAGTCCCAGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAGGCACAGGAACAGGTTaGGGGGAAGGGGCACGGAGC +
Preference number: 3 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRGTGTG*GEGARS
Trigger: GCTCCGTGCCCCTTCCCCCAAACCTGTTCCTGTGCC...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp CTGTCTCTCTCTCTCTCCCTCTCTCTCCACTCGAGTTaGGTCACCAATCTTTTCTCTGTCTCCTGGAGTTGG +
Preference number: 3 (lower is better)
Translates to: LSLSLSLSLHSS*VTNLFSVSWSW
Trigger: CCAACTCCAGGAGACAGAGAAAAGATTGGTGACCCAACTCGAGTGGAGAGAGAGGGAGAGAGAGAGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp CCATTGAGGGCCTGGGTAGGACAAAAAGGGAGAGGATaGGCAAATTTGCTCTCTGTCTCTCTCTCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: PLRAWVGQKGRG*ANLLSVSLSLP
Trigger: AGGGAGAGAGAGAGAGACAGAGAGCAAATTTGCCCATCCTCTCCCTTTTTGTCCTACCCAGGCCCTCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp CTCTCTCTCTTTTTATCTCTCTCTCTCTCCTCCCACTaGCTAGCTTGGGCCTCTTCAGAGCTTGGTAGTCCC +
Preference number: 3 (lower is better)
Translates to: LSLFLSLSLSSH*LAWASSELGSP
Trigger: GGGACTACCAAGCTCTGAAGAGGCCCAAGCTAGCCAGTGGGAGGAGAGAGAGAGAGATAAAAAGAGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGAATGCAAGAGCACCTTaGTCACCCCTCAGCATCAAT +
Preference number: 3 (lower is better)
Translates to: QLPVSGAASREHIQRQLMNARAP*SPLSIN
Trigger: ATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATT...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGACCAGGTGATTCCAATTaGCAGCCAACATCGAGAGCT +
Preference number: 3 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRPGDSN*QPTSRA
Trigger: AGCTCTCGATGTTGGCTGCAAATTGGAATCACCTGG...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp CACATGGTTGGTTCCCGTGGCAACCAGACCCTATTCTaGGGCCATTCAGAAGCCCCTAACTATCAGTCATCT +
Preference number: 3 (lower is better)
Translates to: HMVGSRGNQTLF*GHSEAPNYQSS
Trigger: AGATGACTGATAGTTAGGGGCTTCTGAATGGCCTCAGAATAGGGTCTGGTTGCCACGGGAACCAACCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp TCCACGGCCCCTTTGGGCTCACCACTCCTCATGTATTaGGCAATGCAGAAGCTCTCTGAACCTTGTCCTTTA +
Preference number: 3 (lower is better)
Translates to: STAPLGSPLLMY*AMQKLSEPCPL
Trigger: TAAAGGACAAGGTTCAGAGAGCTTCTGCATTGCTCAATACATGAGGAGTGGTGAGCCCAAAGGGGCCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp CCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATaGCTCCTCAATCCTCAGCTCCTTACAGCTAACCTA +
Preference number: 3 (lower is better)
Translates to: PGLEGGRNIPQI*LLNPQLLTANL
Trigger: TAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp AGAAATGCAGATTATCTTGCCTCACCCCAGACCTACTaGATCAGACACCCTGGGGGTGGAGTTCAGCAATCC +
Preference number: 3 (lower is better)
Translates to: RNADYLASPQTY*IRHPGGGVQQS
Trigger: GGATTGCTGAACTCCACCCCCAGGGTGTCTGATTCAGTAGGTCTGGGGTGAGGCAAGATAATCTGCATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp CAGTCATCTCATTCGCGTACTACCAGACACATCACTTaGGAGGTCCCAAAGGTTTTAGGAGCTCTGCACCAG +
Preference number: 3 (lower is better)
Translates to: QSSHSRTTRHIT*EVPKVLGALHQ
Trigger: CTGGTGCAGAGCTCCTAAAACCTTTGGGACCTCCCAAGTGATGTGTCTGGTAGTACGCGAATGAGATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAAGACAATTGGAGCCATaGGGATCTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRRQLEP*GSLSLS
Trigger: AGAGAGAGAGAGAGATCCCAATGGCTCCAATTGTCT...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp ACACTCAACACTGAACACTCCTTGCCACCAACTGTGTaGGTTTTCTCCCACACTGGCCAATTCTCCAATACC +
Preference number: 3 (lower is better)
Translates to: TLNTEHSLPPTV*VFSHTGQFSNT
Trigger: GGTATTGGAGAATTGGCCAGTGTGGGAGAAAACCCACACAGTTGGTGGCAAGGAGTGTTCAGTGTTGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTAGAAAGTCCCTGGACTaGAGGGTGGCAGGAATATCC +
Preference number: 3 (lower is better)
Translates to: GPHILKSLLSKPVHPAASRKSLD*RVAGIS
Trigger: GGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGGGGGAATGCTCTCTCTaGGCTGCAATGGAAGCCCCA +
Preference number: 3 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQGECSL*AAMEAP
Trigger: TGGGGCTTCCATTGCAGCCAAGAGAGAGCATTCCCC...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCCCTCAGACTGGGACTaGAGCCACCCTACACATTTC +
Preference number: 3 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYPSDWD*SHPTHF
Trigger: GAAATGTGTAGGGTGGCTCAAGTCCCAGTCTGAGGG...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAAAACTTCAGGTTCCTTaGCCTTTGGCTCTGGGATTT +
Preference number: 3 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRKLQVP*PLALGF
Trigger: AAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTT...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 72 bp CCATTCCCTCAAGATACTCAAGAGCAGACACCAATTTaGTCTCCCTATCTTACTCCACTGCCTCCAGGACTA +
Preference number: 3 (lower is better)
Translates to: PFPQDTQEQTPI*SPYLTPLPPGL
Trigger: TAGTCCTGGAGGCAGTGGAGTAAGATAGGGAGAGCAAATTGGTGTCTGCTCTTGAGTATCTTGAGGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACTTGCAACCTGGAAAATaGCTCTCACCAGAACCTGAG +
Preference number: 3 (lower is better)
Translates to: KEASASASSYMSFSSSEDLQPGK*LSPEPE
Trigger: CTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCAA...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAGAATTTCCTCTGGGATaGATTGAGACTCCACTTGTA +
Preference number: 3 (lower is better)
Translates to: GLLYKACSLHWSGSNVWREFPLG*IETPLV
Trigger: TACAAGTGGAGTCTCAATCAATCCCAGAGGAAATTC...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTCTCAAGGGAGCTTATTaGCACTTTCCACCATGGAAG +
Preference number: 3 (lower is better)
Translates to: GPHILKSLLSKPVHPAASLKGAY*HFPPWK
Trigger: CTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGAG...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 72 bp ACTTCTGTAGAACTTCTGTTTCAGCCTCTCACACACTaGAAAAGAGGCATCGGCATCGGCCAGTTCCTATAT +
Preference number: 3 (lower is better)
Translates to: TSVELLFQPLTH*KRGIGIGQFLY
Trigger: ATATAGGAACTGGCCGATGCCGATGCCTCTTTTGCAGTGTGTGAGAGGCTGAAACAGAAGTTCTACAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 72 bp AGCCAACATCGAGAGCTACTGACAAACACAGATAGATaGTTTCCATCCAACCTCTCATGCCAACCTCTTAGC +
Preference number: 3 (lower is better)
Translates to: SQHRELLTNTDR*FPSNLSCQPLS
Trigger: GCTAAGAGGTTGGCATGAGAGGTTGGATGGAAAGCATCTATCTGTGTTTGTCAGTAGCTCTCGATGTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTAAGTCAGCAAGCAGTTaGCAACCTGGAAAATTGCTC +
Preference number: 3 (lower is better)
Translates to: GPHILKSLLSKPVHPAASKSASS*QPGKLL
Trigger: GAGCAATTTTCCAGGTTGCAAACTGCTTGCTGACTT...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCACTTGTAGGATTCAGTTaGCCATCATGTTTCATGTTA +
Preference number: 3 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSLVGFS*PSCFML
Trigger: TAACATGAAACATGATGGCAAACTGAATCCTACAAG...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTACCAGACACATCACTaGGGAGGTCCCAAAGGTTTT +
Preference number: 3 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYYQTHH*GGPKGF
Trigger: AAAACCTTTGGGACCTCCCAAGTGATGTGTCTGGTA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTTCAGCTTGGGTTTTCTaGAATGAGGCAGTCATTGTC +
Preference number: 3 (lower is better)
Translates to: GPHILKSLLSKPVHPAASSAWVF*NEAVIV
Trigger: GACAATGACTGCCTCATTCAAGAAAACCCAAGCTGA...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp ATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTaGGCACATCCTGATGTTCCACTTGAGAGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: MQEHLCHPSASI*AHPDVPLESFK
Trigger: TTTGAAGCTCTCAAGTGGAACATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 72 bp CTATTGGCCCTTGGAAATAAAAACTTCAGGTTCCTTTaGCTTTGGCTCTGGGATTTGTACCATCAACTCCCC +
Preference number: 3 (lower is better)
Translates to: LLALGNKNFRFL*LWLWDLYHQLP
Trigger: GGGGAGTTGATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp CTGATAGTACTAAGAAGCAGAGCCTTGAGAAGTAATTaGGTCATGAAGGTGGAGCCTCCAGGAATGGGATTA +
Preference number: 3 (lower is better)
Translates to: LIVLRSRALRSN*VMKVEPPGMGL
Trigger: TAATCCCATTCCTGGAGGCTCCACCTTCATGACCCAATTACTTCTCAAGGCTCTGCTTCTTAGTACTATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp CACTCGAGTTGGGTCACCAATCTTTTCTCTGTCTCCTaGAGTTGGGTCACCAATATTCTCCTTATCTATTGG +
Preference number: 3 (lower is better)
Translates to: HSSWVTNLFSVS*SWVTNILLIYW
Trigger: CCAATAGATAAGGAGAATATTGGTGACCCAACTCCAGGAGACAGAGAAAAGATTGGTGACCCAACTCGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAATCCTGATGTTCCACTaGAGAGCTTCAAAGCAGTTT +
Preference number: 3 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRILMFH*RASKQF
Trigger: AAACTGCTTTGAAGCTCTCAAGTGGAACATCAGGAT...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGCTCACTCACAAGCCATaGCTTCTGCCCCTAAATTCT +
Preference number: 3 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQLTHKP*LLPLNS
Trigger: AGAATTTAGGGGCAGAAGCAATGGCTTGTGAGTGAG...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGACCACTCCTCATGTATaGAGCAATGCAGAAGCTCTC +
Preference number: 3 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQTTPHV*SNAEAL
Trigger: GAGAGCTTCTGCATTGCTCAATACATGAGGAGTGGT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAGAGCAGACACCAATTaGCTCTCCCTATCTTACTCC +
Preference number: 3 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKRADTN*LSLSYS
Trigger: GGAGTAAGATAGGGAGAGCAAATTGGTGTCTGCTCT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp AAAATGCTCAAGGGAGCTTATTTGCACTTTCCACCATaGAAGGACACTGAGAAGTCAGCAAGCAGTTTGCAA +
Preference number: 3 (lower is better)
Translates to: KMLKGAYLHFPP*KDTEKSASSLQ
Trigger: TTGCAAACTGCTTGCTGACTTCTCAGTGTCCTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGAGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp GTAGGTTCCAAAGTTACTCACATCTTCTATCTGACGTaGCTACAAAGCAGAGGTTCCCATGATTTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: VGSKVTHIFYLT*LQSRGSHDFLL
Trigger: GAGAAGGAAATCATGGGAACCTCTGCTTTGTAGCCACGTCAGATAGAAGATGTGAGTAACTTTGGAACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTTATGTTAAGAGTAACTaGCTCACTCACAAGCCATTG +
Preference number: 3 (lower is better)
Translates to: GPHILKSLLSKPVHPAASYVKSN*LTHKPL
Trigger: CAATGGCTTGTGAGTGAGCAAGTTACTCTTAACATA...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp CTTCTATCTGACGTGGCTACAAAGCAGAGGTTCCCATaGTTTCCTTCTCAGATTTCACCATTTGCTAGAGTA +
Preference number: 3 (lower is better)
Translates to: LLSDVATKQRFP*FPSQISPFARV
Trigger: TACTCTAGCAAATGGTGAAATCTGAGAAGGAAATCATGGGAACCTCTGCTTTGTAGCCACGTCAGATAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp TCCTGGAGTTGGGTCACCAATATTCTCCTTATCTATTaGCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: SWSWVTNILLIY*PLEIKTSGSFA
Trigger: GGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAATAGATAAGGAGAATATTGGTGACCCAACTCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTATACTGTTGTACTGTaGGTTCTGTTTCTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYYTVVL*VLFLWR
Trigger: TCTCCAGAGAAACAGAACCAACAGTACAACAGTATA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp GTTTTCTCCCACACTGGCCAATTCTCCAATACCAACTaGATATCATACAATTCAATTCTGGCATTAATCGGC +
Preference number: 3 (lower is better)
Translates to: VFSHTGQFSNTN*ISYNSILALIG
Trigger: GCCGATTAATGCCAGAATTGAATTGTATGATATCCAGTTGGTATTGGAGAATTGGCCAGTGTGGGAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGTTAATATCCTCTGGCTaGTACAACAGGGGATATTTA +
Preference number: 3 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQLISSG*YNRGYL
Trigger: TAAATATCCCCTGTTGTACAAGCCAGAGGATATTAA...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp ACTGCAGGCTTGACTCAACAGGTTTTAGATACTGTCTaGTTCTGCATTTCTAACAAGCTTCATCGTGATACT +
Preference number: 3 (lower is better)
Translates to: TAGLTQQVLDTV*FCISNKLHRDT
Trigger: AGTATCACGATGAAGCTTGTTAGAAATGCAGAATCAGACAGTATCTAAAACCTGTTGAGTCAAGCCTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp GAGGATAACACGACTACATCTGCCAGAAGGAGCCATTaGACCATATTTAATTTATCACATGTGCTGGTTAAT +
Preference number: 3 (lower is better)
Translates to: EDNTTTSARRSH*TIFNLSHVLVN
Trigger: ATTAACCAGCACATGTGATAAATTAAATATGGTTCAATGGCTCCTTCTGGCAGATGTAGTCGTGTTATCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp CGTGATACTGATGTTGACAGTCTGAAGATAACATTTTaGGAGACGACTAGAAGAACAATCTCTTTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: RDTDVDSLKITF*ETTRRTISFQL
Trigger: AAGCTGGAAAGAGATTGTTCTTCTAGTCGTCTCTCAAAATGTTATCTTCAGACTGTCAACATCAGTATCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CCA 72 bp GTCCAAGCACTACCCACAAAGGAAATTAATATCCTCTaGCTTGTACAACAGGGGATATTTAAAATAAGAGAG +
Preference number: 3 (lower is better)
Translates to: VQALPTKEINIL*LVQQGIFKIRE
Trigger: CTCTCTTATTTTAAATATCCCCTGTTGTACAAGCCAGAGGATATTAATTTCCTTTGTGGGTAGTGCTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 72 bp AGATTTGCATTATTTCTGATAAATGTAAGACTGCAATaGAGTTTTATGCCAGTACTGCTTTGGACAGTGTCC +
Preference number: 3 (lower is better)
Translates to: RFALFLINVRLQ*SFMPVLLWTVS
Trigger: GGACACTGTCCAAAGCAGTACTGGCATAAAACTGCATTGCAGTCTTACATTTATCAGAAATAATGCAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR TCA 72 bp TTCTCCTTTCTTAATACTGTTAATCTGTGGGGAGACTaGGTCATCTGTAAAATGGAATGTTCTGTTAGATCT +
Preference number: 3 (lower is better)
Translates to: FSFLNTVNLWGD*VICKMECSVRS
Trigger: AGATCTAACAGAACATTCCATTTTACAGATGACTCAGTCTCCCCACAGATTAACAGTATTAAGAAAGGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR GCA 72 bp ATTTTAGAGACCTACTTATCAGCATCTATCAAATCATaGTGTAGATGCTATACTGCTAACTGGAACCTAAAG +
Preference number: 3 (lower is better)
Translates to: ILETYLSASIKS*CRCYTANWNLK
Trigger: CTTTAGGTTCCAGTTAGCAGTATAGCATCTACAGCATGATTTGATAGATGCTGATAAGTAGGTCTCTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp CAGTTCGGCAGTGTAACCTCCTCTGGAGGATCACCCTaGGGCCACTGGAGACTCCTCACCTGGAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QFGSVTSSGGSP*GHWRLLTWSFL
Trigger: CAGAAAACTCCAGGTGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTGCCGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGCTTCTCTACAAAGCCTaGAGCCTCCACTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QLPVSGAASREHIQRQLMLLYKA*SLHWSG
Trigger: CCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAG...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAGAGTCAGCCTGGGCTTaGGTTGGCTCTAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRESAWA*VGSSPR
Trigger: CCTTGGGCTAGAGCCAACCCAAGCCCAGGCTGACTC...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp TCAACTCCCCTGGTTCTCAGGCCCTCAGACTGGGACTaGAGCCACCCTACACATTTCCCTGATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: STPLVLRPSDWD*SHPTHFPDSPA
Trigger: AGCTGGAGAATCAGGGAAATGTGTAGGGTGGCTCAAGTCCCAGTCTGAGGGCCTGAGAACCAGGGGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGTCACACAGCAGCCTGTaGAGAGTCTCCACGACCTAT +
Preference number: 4 (lower is better)
Translates to: QLPVSGAASREHIQRQLMSHSSL*RVSTTY
Trigger: ATAGGTCGTGGAGACTCTTCACAGGCTGCTGTGTGA...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCACTCAGGCCCTCAGACTaGGACTTGAGCCACCCTACA +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSLRPSD*DLSHPT
Trigger: TGTAGGGTGGCTCAAGTCCCAGTCTGAGGGCCTGAG...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGTCCAGAGGAGGAGGATaGGCTCTTCTGCTACTTACT +
Preference number: 4 (lower is better)
Translates to: QLPVSGAASREHIQRQLMSRGGG*ALLLLT
Trigger: AGTAAGTAGCAGAAGAGCTCATCCTCCTCCTCTGGA...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGCCCCTCTCCACCAATaGAAGAGCACCTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSAPLHQ*KSTFVT
Trigger: GGTGACAAAGGTGCTCTTGCATTGGTGGAGAGGGGC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATCTCTCTCCTCCCACTaGCTAGCTTGGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRSLSSH*LAWASS
Trigger: TGAAGAGGCCCAAGCTAGCCAGTGGGAGGAGAGAGA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp GCCTGGGTAGGACAAAAAGGGAGAGGATGGGCAAATTaGCTCTCTGTCTCTCTCTCTCTCCCTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AWVGQKGRGWAN*LSVSLSLPLSP
Trigger: TGGAGAGAGAGGGAGAGAGAGAGAGACAGAGAGCAAATTTGCCCATCCTCTCCCTTTTTGTCCTACCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGCCTATCTTACTCCACTaGCTCCAGGACTATTTGTGG +
Preference number: 4 (lower is better)
Translates to: QLPVSGAASREHIQRQLMPILLH*LQDYLW
Trigger: CCACAAATAGTCCTGGAGGCAGTGGAGTAAGATAGG...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGGCAGCTGTGGCCTCTaGGAAAGATTTTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSGSCGL*ERFSWD
Trigger: ATCCCAGGAAAATCTTTCCCAGAGGCCACAGCTGCC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTGCACAGGAACAGGTTTaGGGGAAGGGGCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASAQEQV*GKGHGA
Trigger: AGCTCCGTGCCCCTTCCCCCAAACCTGTTCCTGTGC...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACCCAATGAGCTCAGAGTaGTCTGGCCGAGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDPMSSE*SGRGRR
Trigger: TCTACGTCCTCGGCCAGATCACTCTGAGCTCATTGG...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAGCATGCTGGCAGCCTaGCCTCGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKSMLAA*PRTSQP
Trigger: AGGCTGGGAAGTCCGAGGTCAGGCTGCCAGCATGCT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGCCTCAGACTGGGACTTaGGCCACCCTACACATTTCC +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMPQTGT*ATLHIS
Trigger: GGAAATGTGTAGGGTGGCTCAAGTCCCAGTCTGAGG...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGGGAATGCTCTCTCTTaGCTGCAATGGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMGNALS*LQWKPQ
Trigger: CTGGGGCTTCCATTGCAGCCAAGAGAGAGCATTCCC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGACTGGAGGATCACCCTTaGGCCACTGGAGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRLEDHP*ATGDSS
Trigger: TGAGGAGTCTCCAGTGGCCCAAGGGTGATCCTCCAG...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp ACTGAGAAGTCAGCAAGCAGTTTGCAACCTGGAAAATaGCTCTCACCAGAACCTGAGCATGCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TEKSASSLQPGK*LSPEPEHAGSL
Trigger: CAGGCTGCCAGCATGCTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCAAACTGCTTGCTGACTTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTCAGTTCCAGGAGTCCTaGACTTCTCGTCCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASQFQES*TSRPAH
Trigger: ATGAGCGGGACGAGAAGTTCAGGACTCCTGGAACTG...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGAGCATAACATGTGGTaGGCAGAGAGAAGAAAGACG +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSEHNMW*AERRKT
Trigger: CGTCTTTCTTCTCTCTGCTCACCACATGTTATGCTC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGACACACACAGACGTCTaGCCCTGCACCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMTHTDV*PCTSKF
Trigger: GAACTTGGAGGTGCAGGGTCAGACGTCTGTGTGTGT...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGTTGGGTTTTCTTGAATaGGGCAGTCATTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: QLPVSGAASREHIQRQLMLGFLE*GSHCHE
Trigger: CTCATGACAATGACTGCCTCATTCAAGAAAACCCAA...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATGGCAAACATTAGTATaGCCATTGGGTGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRWQTLV*PLGALS
Trigger: AGAGAGGGCACCCAATGGTCATACTAATGTTTGCCA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACATGCTCTCTCTTGGCTaGAATGGAAGCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDMLSLG*NGSPRA
Trigger: TGCTCTGGGGCTTCCATTGCAGCCAAGAGAGAGCAT...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGCCTTGAGAAGTAATTaGGTCATGAAGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSALRSN*VMKVEP
Trigger: AGGCTCCACCTTCATGACCCAATTACTTCTCAAGGC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACGCCCCAGAGCACACTTaGGATCAGGAGAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDAPEHT*DQEKSD
Trigger: GTCAGATTTCTCCTGATCCCAAGTGTGCTCTGGGGC...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTCAGTGTAACCTCCTCTaGAGGATCACCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASQCNLL*RITLGP
Trigger: TGGCCCAAGGGTGATCCTCCAGAGGAGGTTACACTG...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAAATCCATTGAGGGCCTaGGTAGGACAAAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRNPLRA*VGQKGR
Trigger: TCTCCCTTTTTGTCCTACCCAGGCCCTCAATGGATT...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp CCCATTCCCTCAAGATACTCAAGAGCAGACACCAATTaGCTCTCCCTATCTTACTCCACTGCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PIPSRYSRADTN*LSLSYSTASRT
Trigger: AGTCCTGGAGGCAGTGGAGTAAGATAGGGAGAGCAAATTGGTGTCTGCTCTTGAGTATCTTGAGGGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp AAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTaGTACCATCAACTCCCCTGGTTCTCAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KNFRFLCLWLWD*YHQLPWFSGPQ
Trigger: CTGAGGGCCTGAGAACCAGGGGAGTTGATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGGACAGAGACTCCTGCTaGTCACACTGCAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQDRDSC*SHCRSH
Trigger: GTGGCTCCTGCAGTGTGATCAGCAGGAGTCTCTGTC...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAATCACCCCAGACCTACTaGATCAGACACCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKSPQTY*IRHPGG
Trigger: ACCCCCAGGGTGTCTGATTCAGTAGGTCTGGGGTGA...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTTTGCCACCAACTGTGTaGGTTTTCTCCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASLPPTV*VFSHTG
Trigger: GCCAGTGTGGGAGAAAACCCACACAGTTGGTGGCAA...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATCTTGCCAGTCAGCTTaGGTTTTCTTGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRSCQSA*VFLNEA
Trigger: TGCCTCATTCAAGAAAACCCAAGCTGACTGGCAAGA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGACTCTCTTGGCTGCAATaGAAGCCCCAGAGCACACTT +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRLSWLQ*KPQSTL
Trigger: AAGTGTGCTCTGGGGCTTCCATTGCAGCCAAGAGAG...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACTCACCTGGAGTTTTCTaGGGAATGCTCTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDSPGVF*GMLSLG
Trigger: GCCAAGAGAGAGCATTCCCCAGAAAACTCCAGGTGA...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGTGGAGACTCCTCACCTaGAGTTTTCTGGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMWRLLT*SFLGNA
Trigger: AGCATTCCCCAGAAAACTCCAGGTGAGGAGTCTCCA...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTCCCACTGGCTAGCTTaGGCCTCTTCAGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYSHWLA*ASSELG
Trigger: ACCAAGCTCTGAAGAGGCCCAAGCTAGCCAGTGGGA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp TTAGAAGTATTAAAAGGGAGTCAGCCTGGGCTTGGGTaGGCTCTAGCCCAAGGACCCTTCCATATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LEVLKGSQPGLG*ALAQGPFHMLQ
Trigger: TTGAAGCATATGGAAGGGTCCTTGGGCTAGAGCCAACCCAAGCCCAGGCTGACTCCCTTTTAATACTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGAAAGAATGCAGCTCTaGAGCAGCCTCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHERMQL*SSLPGS
Trigger: GCTGCCTGGGAGGCTGCTTCAGAGCTGCATTCTTTC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGAATATCCCCCAGATATaGCTCCTCAATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMNIPQI*LLNPQL
Trigger: GAGCTGAGGATTGAGGAGTCATATCTGGGGGATATT...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGAAAGTCCCTGGACTTaGGGGTGGCAGGAATATCCC +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKESPWT*GWQEYP
Trigger: GGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAATGGGTCCAGACATTGTaGTTGTCAAAGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKWVQTL*LSKAPR
Trigger: CCTGGGGGCCTTTGACAATCACAATGTCTGGACCCA...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTCCCTACACATTTCCCTaGTTCTCCAGCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASPYTFP*FSSLQV
Trigger: CACCTGTAAGCTGGAGAATCAGGGAAATGTGTAGGG...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAATAGAAAGGTATCCTTaGATGAATGGAAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRIERYP*MNGKAP
Trigger: GGGTGCCTTTCCATTCATTCAAGGATACCTTTCTAT...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAAATCTGTGGGGAGACTaGGTCATCTGTAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSNLWGD*VICKME
Trigger: TTCCATTTTACAGATGACTCAGTCTCCCCACAGATT...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGACATGTAGAGAAAGTATaGACCAGACAAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRHVEKV*TRQAVL
Trigger: AAGGACAGCTTGTCTGGTTCATACTTTCTCTACATG...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACCTTTGGGCTTACCCTTaGAAATCAGTTCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDLWAYP*KSVPGV
Trigger: GACTCCTGGAACTGATTTGCAAGGGTAAGCCCAAAG...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGCTTTGGTGGAAAGAATaGAGCTCTGAAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMLWWKE*SSEAAS
Trigger: GGAGGCTGCTTCAGAGCTGCATTCTTTCCACCAAAG...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTCCTCAGGGCTAAGTTaGAGACCATTGTCCACCACT +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMSSGLS*RPLSTT
Trigger: AGTGGTGGACAATGGTCTGCAACTTAGCCCTGAGGA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACACACTGAACACTCCTTaGCACCAACTGTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDTLNTP*HQLCGF
Trigger: AAACCCACACAGTTGGTGGCAAGGAGTGTTCAGTGT...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGAGGATGAGCTCTTCTaGTACTTACTAAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMEDELF*YLLSCS
Trigger: GCTGCAGCTTAGTAAGTAGCAGAAGAGCTCATCCTC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGAGTTTTCTGGGGAATaGTCTCTCTTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMEFSGE*SLLAAM
Trigger: CATTGCAGCCAAGAGAGAGCATTCCCCAGAAAACTC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGTATTCAAATCCAGGGTaGCAATGTCCCAGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMYSNPG*QCPSSA
Trigger: TGCCGAACTGGGACATTGGCACCCTGGATTTGAATA...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTGCGGTAGCAGTTTTCTaGTACCCAGTGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASAVAVF*YPVTSG
Trigger: TCCAGAAGTCACTGGGTAGCAGAAAACTGCTACCGC...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTGAGTTTCTTACAGCCTaGCTTCCCCAGAATAGCCTG +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASEFLTA*LPQNSL
Trigger: CAGGCTATTCTGGGGAAGGCAGGCTGTAAGAAACTC...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCACTTTTCTCTGTCTCCTaGAGTTGGGTCACCAATATT +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSLFSVS*SWVTNI
Trigger: AATATTGGTGACCCAACTCCAGGAGACAGAGAAAAG...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACGACAATTGGAGCCATTaGGATCTCTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDDNWSH*DLSLSL
Trigger: GAGAGAGAGAGAGAGATCCCAATGGCTCCAATTGTC...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCACACAGGTTGCTGGTaGTACGTTAGGAGGATCACA +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYHTGCW*YVRRIT
Trigger: TGTGATCCTCCTAACGTATCACCAGCAACCTGTGTG...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGAACCAGACCCTATTCTaGGGCCATTCAGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQNQTLF*GHSEAP
Trigger: AGGGGCTTCTGAATGGCCTCAGAATAGGGTCTGGTT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTCCACTCCTCATGTATTaGGCAATGCAGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASPLLMY*AMQKLS
Trigger: AGAGAGCTTCTGCATTGCTCAATACATGAGGAGTGG...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGAGCTTGGTAGTCCCTaGGTAATTGCAGTTCTTACA +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMELGSP*VIAVLT
Trigger: TGTAAGAACTGCAATTACTCAGGGACTACCAAGCTC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTGTGTACACTGGGGCCTaGATGTTTAAAATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASVYTGA*MFKMAP
Trigger: AGGAGCCATTTTAAACATTCAGGCCCCAGTGTACAC...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACTCAAGGGAGCTTATTTaGACTTTCCACCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDSRELI*TFHHGR
Trigger: CCTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGA...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTATGAGCTACATATTGTaGGCAGTACCCACAAGGACC +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASMSYIL*AVPTRT
Trigger: GGTCCTTGTGGGTACTGCCCACAATATGTAGCTCAT...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGAAGTACCCAGGCTGCTaGCTTCTTGCCAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQKYPGC*LLASQL
Trigger: AAGCTGACTGGCAAGAAGCCAGCAGCCTGGGTACTT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGTATCCTTGAATGAATaGAAAGGCACCCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSVSLNE*KGTPKS
Trigger: AGATTTTGGGGTGCCTTTCCATTCATTCAAGGATAC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp GAGCCACTGTGTAGGGCAACCTATGTTAAGAGTAACTaGCTCACTCACAAGCCATTGCTTCTGCCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: EPLCRATYVKSN*LTHKPLLLPLN
Trigger: ATTTAGGGGCAGAAGCAATGGCTTGTGAGTGAGCAAGTTACTCTTAACATAGGTTGCCCTACACAGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp TTAACCCCCAAGCTGATAGTACTAAGAAGCAGAGCCTaGAGAAGTAATTGGGTCATGAAGGTGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTPKLIVLRSRA*RSNWVMKVEPP
Trigger: TGGAGGCTCCACCTTCATGACCCAATTACTTCTCAAGGCTCTGCTTCTTAGTACTATCAGCTTGGGGGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp AGGCTGCTGGCTTCTTGCCAGTCAGCTTGGGTTTTCTaGAATGAGGCAGTCATTGTCATGAGCGTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: RLLASCQSAWVF*NEAVIVMSVSF
Trigger: AAAACTTACGCTCATGACAATGACTGCCTCATTCAAGAAAACCCAAGCTGACTGGCAAGAAGCCAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp GTATCACCTGAGAACCTGTTAGAAATGCAGATTATCTaGCCTCACCCCAGACCTACTGAATCAGACACCCTG +
Preference number: 4 (lower is better)
Translates to: VSPENLLEMQII*PHPRPTESDTL
Trigger: CAGGGTGTCTGATTCAGTAGGTCTGGGGTGAGGCAAGATAATCTGCATTTCTAACAGGTTCTCAGGTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACAACACCATGAGTCATTaGTGGTGGATGAGCTACATA +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDNTMSH*WWMSYI
Trigger: TATGTAGCTCATCCACCATCAATGACTCATGGTGTT...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACGTGATTTTTGAGAACTaGGATCTTCAGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDVIFEN*DLQILR
Trigger: CCTCAGGATCTGAAGATCTCAGTTCTCAAAAATCAC...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATTGAAATATATCATGTaGGAAGCGGTAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRLKYIM*EAVAVF
Trigger: GAAAACTGCTACCGCTTCTCACATGATATATTTCAA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAGCCTTCATAATCACATaGGCCAATTTCCACAATAAA +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRAFIIT*ANFHNK
Trigger: TTTATTGTGGAAATTGGCTCATGTGATTATGAAGGC...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGACTGAAGATAACATTTTaGGAGACGACTAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRLKITF*ETTRRT
Trigger: TGTTCTTCTAGTCGTCTCTCAAAATGTTATCTTCAG...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGAGAGGGAAAATGCTGTaGCTTTGTTATTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMRGKML*LCYWQS
Trigger: GCTCTGCCAATAACAAAGGCACAGCATTTTCCCTCT...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGATGCACAGAGGGAAAATaGTGTGCCTTTGTTATTGGC +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRCTEGK*CAFVIG
Trigger: GCCAATAACAAAGGCACAGCATTTTCCCTCTGTGCA...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTCCCTGTTCTGTCCCTaGCACATACACACACAGACG +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHSLFCP*HIHTQT
Trigger: CGTCTGTGTGTGTATGTGGCAGGGACAGAACAGGGA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATAGGCTGCTGGCTTCTTaGCAGTCAGCTTGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHRLLAS*QSAWVF
Trigger: GAAAACCCAAGCTGACTGGCAAGAAGCCAGCAGCCT...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACAAGGACCCTTCCATATaGTTCAAGTCTAGACCTAGA +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDKDPSI*FKSRPR
Trigger: TCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTAACTTCAGGTTCCTTTaGCTTTGGCTCTGGGATTTG +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASNFRFL*LWLWDL
Trigger: CAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTT...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACGAGGATGGGCAAATTTaGTCTCTGTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYEDGQI*SLSLSL
Trigger: GAGAGAGAGAGACAGAGAGCAAATTTGCCCATCCTC...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAGCATCTATCAAATCATaGTGTAGATGCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRASIKS*CRCYTA
Trigger: AGCAGTATAGCATCTACAGCATGATTTGATAGATGC...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTAAATGCAGATTATCTTaGCTCACCCCAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASKCRLS*LTPDLL
Trigger: CAGTAGGTCTGGGGTGAGGCAAGATAATCTGCATTT...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGTCTCGCTCAGCTTGTTaGCATAGTCCAGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMSRSAC*HSPEMY
Trigger: ATACATTTCTGGACTATGCCAACAAGCTGAGCGAGA...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGATCTTCTATCTGACGTaGCTACAAAGCAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMIFYLT*LQSRGS
Trigger: GGAACCTCTGCTTTGTAGCCACGTCAGATAGAAGAT...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTACCATCAACTCCCCTaGTTCTCAGGCCCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHYHQLP*FSGPQT
Trigger: AGTCTGAGGGCCTGAGAACCAGGGGAGTTGATGGTA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAAAATTTAGCTTGAACTaGAATCAGCTAGGATCACGT +
Preference number: 4 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSKFSLN*NQLGSR
Trigger: ACGTGATCCTAGCTGATTCCAGTTCAAGCTAAATTT...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATCAGACACCCTGGGGGTaGAGTTCAGCAATCCACATT +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHQTPWG*SSAIHI
Trigger: AATGTGGATTGCTGAACTCCACCCCCAGGGTGTCTG...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp TGTAAGACTGCAATGCAGTTTTATGCCAGTACTGCTTaGGACAGTGTCCCCAGACCTTTAGCCAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: CKTAMQFYASTA*DSVPRPLAKVN
Trigger: ATTGACCTTGGCTAAAGGTCTGGGGACACTGTCCAAAGCAGTACTGGCATAAAACTGCATTGCAGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp TTTTTATTGACATTCACACTCAACACTGAACACTCCTaGCCACCAACTGTGTGGGTTTTCTCCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: FLLTFTLNTEHS*PPTVWVFSHTG
Trigger: GCCAGTGTGGGAGAAAACCCACACAGTTGGTGGCAAGGAGTGTTCAGTGTTGAGTGTGAATGTCAATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp GGAGTGGGTCAAATGTTTGGAGATGGCTGCAATGATTaGATTAGGGCCATAGATCTGGGGCCTTTTATTCTC +
Preference number: 4 (lower is better)
Translates to: GVGQMFGDGCND*IRAIDLGPFIL
Trigger: GAGAATAAAAGGCCCCAGATCTATGGCCCTAATCAAATCATTGCAGCCATCTCCAAACATTTGACCCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAAGAGGCATCGGCATCGGCCAGTTCCTATATGTCTTTTTCCAGCTCAGAAGACCAGATCCTGAGGGAATaGATTCCACAATTTCATACA +
Preference number: 4 (lower is better)
Translates to: KEASASASSYMSFSSSEDQILRE*IPQFHT
Trigger: TGTATGAAATTGTGGAATTCATTCCCTCAGGATCTG...GTCTTCTGAGCTGGAAAAAGACATATAGGAACTGGCCGATGCCGATGCCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTCTCTCCCTTTATTCTaGAAACTCTACCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYSLPLF*KLYPLT
Trigger: TGTGAGGGGGTAGAGTTTTCAGAATAAAGGGAGAGA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATCCACTCTGTGGAGGGTaGTATAGTGTTGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHPLCGG*YSVAGF
Trigger: AAAGCCAGCAACACTATAGCACCCTCCACAGAGTGG...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTGCAATGCAGTTTTATaGCAGTACTGCTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMCNAVL*QYCFGQ
Trigger: CTGTCCAAAGCAGTACTGGCATAAAACTGCATTGCA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGTCATGTATTGAGCAATaGAGAAGCTCTCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMSCIEQ*RSSLNL
Trigger: AAGGTTCAGAGAGCTTCTGCATTGCTCAATACATGA...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGAGACTCCACTTGTAACTaGATTCTTTCTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRDSTCN*ILSCVY
Trigger: ATAAACACAAGAAAGAATGCAGTTACAAGTGGAGTC...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAATGTTTGGAGATGGCTaGAATGATTTGATTAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRMFGDG*NDLIRA
Trigger: GGCCCTAATCAAATCATTGCAGCCATCTCCAAACAT...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTTCTCGTCCCGCTCATaGCACATTCATAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYFSSRS*HIHRKF
Trigger: GAACTTTCTATGAATGTGCCATGAGCGGGACGAGAA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGCTTCCCAGCACTCTTTaGGCTTACCCTTGCAAATCA +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQLPSTL*AYPCKS
Trigger: TGATTTGCAAGGGTAAGCCCAAAGAGTGCTGGGAAG...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGCCCAAGAAAACCCATaGTATATTGGCAAATACATC +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMAQENP*YIGKYI
Trigger: GATGTATTTGCCAATATACCATGGGTTTTCTTGGGC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGTTGGTTGGACTTCCTaGTTCTTCTCCATGTCGTGT +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKVGWTS*FFSMSC
Trigger: ACACGACATGGAGAAGAACCAGGAAGTCCAACCAAC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAGTGAATCTCCAGCTTTaGTGGAGAGATTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRVNLQL*WRDFRD
Trigger: GTCTCTAAAATCTCTCCACCAAAGCTGGAGATTCAC...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp ACATGCCTGACCCCTAAGCTAGAATATCTGAGACAATaGGAGCCATTGGGATCTCTCTCTCTCTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TCLTPKLEYLRQ*EPLGSLSLSLF
Trigger: AAAAAGAGAGAGAGAGAGAGATCCCAATGGCTCCAATTGTCTCAGATATTCTAGCTTAGGGGTCAGGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGATGAGCCCTCTCACATaGGTCTGTCTGTTGAATGAT +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQMSPLT*VCLLND
Trigger: ATCATTCAACAGACAGACTCATGTGAGAGGGCTCAT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTCCCAATTTCATATGTTaGAATCTTAACCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GPHILKSLLSKPVHPAASPNFIC*NLNPQA
Trigger: AGCTTGGGGGTTAAGATTTCAACATATGAAATTGGG...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGAATGCAGAAGCTCTCTaGACCTTGTCCTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMNAEAL*TLSFRF
Trigger: AAATCTAAAGGACAAGGTTCAGAGAGCTTCTGCATT...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGACTTTTACCAGACTGTTaGGCATTGCAACATTGTAAG +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRLLPDC*ALQHCK
Trigger: CTTACAATGTTGCAATGCTCAACAGTCTGGTAAAAG...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACAAAGGTATCCTTGAATaGATGGAAAGGCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYKGILE*MERHPK
Trigger: TTTGGGGTGCCTTTCCATTCATTCAAGGATACCTTT...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGCTTCAGCAAAATAACTaGGGTGACCATGTCATTTAT +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMLQQNN*GDHVIY
Trigger: ATAAATGACATGGTCACCTCAGTTATTTTGCTGAAG...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGAATGTATTTTCCAACTaGTCCTTCTCCTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMNVFSN*SFSFCA
Trigger: TGCACAAAAGGAGAAGGAGCAGTTGGAAAATACATT...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTGCAACCTGGAAAATTaGTCTCACCAGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHCNLEN*SHQNLS
Trigger: GCTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTGGGAAAGATTTTCCTaGGATTCACACAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHWERFS*DSHSSL
Trigger: CAGGCTGCTGTGTGAATCCCAGGAAAATCTTTCCCA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAATTGCACTTTCCACCATaGAAGGACACTGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKLHFPP*KDTEKS
Trigger: TGACTTCTCAGTGTCCTTCCATGGTGGAAAGTGCAA...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGGTTTTCTCCCACACTaGCCAATTCTCCAATACCAA +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKGFLPH*PILQYQ
Trigger: TTGGTATTGGAGAATTGGCCAGTGTGGGAGAAAACC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGCTACCCAGTGACTTCTaGATTGCTTTAACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SPRTLPYASSLDLEETVMLPSDF*IALTSF
Trigger: AAAACTGGTTAAAGCAATCCAGAAGTCACTGGGTAG...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGAAATTAATATCCTCTaGCTTGTACAACAGGGGATA +
Preference number: 4 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMEINIL*LVQQGI
Trigger: TATCCCCTGTTGTACAAGCCAGAGGATATTAATTTC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAAATCTCCAGCTTTGGTaGAGAGATTTTAGAGACCTA +
Preference number: 4 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRNLQLW*RDFRDL
Trigger: TAGGTCTCTAAAATCTCTCCACCAAAGCTGGAGATT...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp CTCCTGGAGTTGGGTCACCAATATTCTCCTTATCTATaGGCCCTTGGAAATAAAAACTTCAGGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LLELGHQYSPYL*ALGNKNFRFLC
Trigger: GCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAATAGATAAGGAGAATATTGGTGACCCAACTCCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAAGCAGAGGTTCCCATaGTTTCCTTCTCAGATTTCA +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKKQRFP*FPSQIS
Trigger: TGAAATCTGAGAAGGAAATCATGGGAACCTCTGCTT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATCAGCTTGGGTTTTCTTaGATGAGGCAGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHQLGFS*MRQSLS
Trigger: TGACAATGACTGCCTCATTCAAGAAAACCCAAGCTG...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTGTTGCTGGCTTTGGTaGAAAGAATGCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHCCWLW*KECSSE
Trigger: TTCAGAGCTGCATTCTTTCCACCAAAGCCAGCAACA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCCTGAATGTTTAAAATaGCTCCTTCATTCACATGCC +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYPECLK*LLHSHA
Trigger: GGCATGTGAATGAAGGAGCCATTTTAAACATTCAGG...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp CCTCAGCATCAATTTGAGCACATCCTGATGTTCCACTaGAGAGCTTCAAAGCAGTTTCCTTTGTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: PQHQFEHILMFH*RASKQFPLCYC
Trigger: ACAATAACACAAAGGAAACTGCTTTGAAGCTCTCAAGTGGAACATCAGGATGTGCTCAAATTGATGCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp AGTTGGGTCACCAATATTCTCCTTATCTATTGGCCCTaGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SWVTNILLIYWP*EIKTSGSFAFG
Trigger: GCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGCCAATAGATAAGGAGAATATTGGTGACCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp CATTTATTTAAGCTCATGATTTTTGGGGTCATGGAGTaGGATAGGACATGGCAAGGACTTCTCTACAAAGCC +
Preference number: 4 (lower is better)
Translates to: HLFKLMIFGVME*DRTWQGLLYKA
Trigger: GGCTTTGTAGAGAAGTCCTTGCCATGTCCTATCCAACTCCATGACCCCAAAAATCATGAGCTTAAATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACGCAACTTGTGATTTTTaGGAACTGAGATCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYATCDF*ELRSSD
Trigger: ATCTGAAGATCTCAGTTCTCAAAAATCACAAGTTGC...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTTTTCTGCTACCCAGTaGCTTCTGGATTGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHFSATQ*LLDCFN
Trigger: GTTAAAGCAATCCAGAAGTCACTGGGTAGCAGAAAA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATTTTGAATCAGTGGACTaGGTAAGGAAAATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHFESVD*VRKICP
Trigger: AGGGCAGATTTTCCTTACTCAGTCCACTGATTCAAA...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGACAAACACAGATAGATaGTTTCCATCCAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQTNTDR*FPSNLS
Trigger: TGAGAGGTTGGATGGAAAGCATCTATCTGTGTTTGT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGAATGTAAGACTGCAATaGAGTTTTATGCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQNVRLQ*SFMPVL
Trigger: CAGTACTGGCATAAAACTGCATTGCAGTCTTACATT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR GCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAAATCATGCTGTAGATaGTATACTGCTAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKKSCCR*YTANWN
Trigger: GTTCCAGTTAGCAGTATAGCATCTACAGCATGATTT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp ACCTATGTTAAGAGTAACTTGCTCACTCACAAGCCATaGCTTCTGCCCCTAAATTCTGCAACCAATATTTAC +
Preference number: 4 (lower is better)
Translates to: TYVKSNLLTHKP*LLPLNSATNIY
Trigger: GTAAATATTGGTTGCAGAATTTAGGGGCAGAAGCAATGGCTTGTGAGTGAGCAAGTTACTCTTAACATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATAATTTTAAAATGCCCTaGAAAGCATCCATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHNFKMP*KASMLE
Trigger: CTCCAACATGGATGCTTTTCAGGGCATTTTAAAATT...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR TCA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGCCAGAAGGAGCCATTaGACCATATTTAATTTATCA +
Preference number: 4 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHARRSH*TIFNLS
Trigger: TGATAAATTAAATATGGTTCAATGGCTCCTTCTGGC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CCA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGTTACAGTTGGTTGTTaGAAACAGGATACAAATAAG +
Preference number: 4 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKVTVGC*KQDTNK
Trigger: CTTATTTGTATCCTGTTTCCAACAACCAACTGTAAC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp TTCTTGCCTTGCATCATAAGGCACGTAGCATCTGCTTaGATTTTTAGTGATGCTAATATAGATGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLPCIIRHVASA*IFSDANIDEWL
Trigger: AAGCCACTCATCTATATTAGCATCACTAAAAATCAAAGCAGATGCTACGTGCCTTATGATGCAAGGCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
3UTR CAA 72 bp CTGCTTAACAATCTACCTCATGTCTGCCATATTTTATaGGTTCATAAGGTCAGATTCAAAGTGAGGATAACA +
Preference number: 4 (lower is better)
Translates to: LLNNLPHVCHIL*VHKVRFKVRIT
Trigger: TGTTATCCTCACTTTGAATCTGACCTTATGAACCAATAAAATATGGCAGACATGAGGTAGATTGTTAAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGGGCACAGGAACAGGTTaGGGGGAAGGGGCACGGAGC +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMGTGTG*GEGARS
Trigger: GCTCCGTGCCCCTTCCCCCAAACCTGTTCCTGTGCC...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCACAGCCTGGGCTTGGGTaGGCTCTAGCCCAAGGACCC +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSQPGLG*ALAQGP
Trigger: GGGTCCTTGGGCTAGAGCCAACCCAAGCCCAGGCTG...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 90 bp TCCATTGAGCAGAGCCACAGAAAGCCACATCACTGGAGCCACCAATaGGCTCAGAGTGATCTGGCCGAGGACGTAGAAGAAACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SIEQSHRKPHHWSHQ*AQSDLAEDVEETAA
Trigger: AGCTGCCGTTTCTTCTACGTCCTCGGCCAGATCACTCTGAGCTCATTGGTGGCTCCAGTGATGTGGCTTTCTGTGGCTCTGCTCAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 90 bp GAGGGTGCTATAGTGTTGCTGGCTTTGGTGGAAAGAATGCAGCTCTaGAGCAGCCTCCCAGGCAGCAAACGTAGGCATGGGAAAAGGATC +
Preference number: 5 (lower is better)
Translates to: EGAIVLLALVERMQL*SSLPGSKRRHGKRI
Trigger: GATCCTTTTCCCATGCCTACGTTTGCTGCCTGGGAGGCTGCTTCAGAGCTGCATTCTTTCCACCAAAGCCAGCAACACTATAGCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGCCAGGTGATTCCAATTaGCAGCCAACATCGAGAGCT +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMPGDSN*QPTSRA
Trigger: AGCTCTCGATGTTGGCTGCAAATTGGAATCACCTGG...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGACCCTCAGACTGGGACTaGAGCCACCCTACACATTTC +
Preference number: 5 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRPSDWD*SHPTHF
Trigger: GAAATGTGTAGGGTGGCTCAAGTCCCAGTCTGAGGG...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGATAGTGTTGCTGGCTTaGGTGGAAAGAATGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMIVLLA*VERMQL
Trigger: GAGCTGCATTCTTTCCACCAAAGCCAGCAACACTAT...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGCTCACTCACAAGCCATaGCTTCTGCCCCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMLTHKP*LLPLNS
Trigger: AGAATTTAGGGGCAGAAGCAATGGCTTGTGAGTGAG...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGAGACAATTGGAGCCATaGGGATCTCTCTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMRQLEP*GSLSLS
Trigger: AGAGAGAGAGAGAGATCCCAATGGCTCCAATTGTCT...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 90 bp CTGAACTTCTCGTCCCGCTCATGGCACATTCATAGAAAGTTCCATTaGGCAGAGCCACAGAAAGCCACATCACTGGAGCCACCAATGAGC +
Preference number: 5 (lower is better)
Translates to: LNFSSRSWHIHRKFH*AEPQKATSLEPPMS
Trigger: GCTCATTGGTGGCTCCAGTGATGTGGCTTTCTGTGGCTCTGCTCAATGGAACTTTCTATGAATGTGCCATGAGCGGGACGAGAAGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCATCTTCCCAGCACTCTTaGGGCTTACCCTTGCAAATC +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSSSQHS*GLPLQI
Trigger: GATTTGCAAGGGTAAGCCCAAAGAGTGCTGGGAAGA...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGAGGGTGCTATAGTGTaGCTGGCTTTGGTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSEGAIV*LALVER
Trigger: TCTTTCCACCAAAGCCAGCAACACTATAGCACCCTC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATACCCACAAGGACCATaGTCGTCTCATCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRYPQGP*SSHHPQ
Trigger: CTGAGGATGATGAGACGACAATGGTCCTTGTGGGTA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAGGGGAATGCTCTCTCTaGGCTGCAATGGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRGECSL*AAMEAP
Trigger: TGGGGCTTCCATTGCAGCCAAGAGAGAGCATTCCCC...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCTCCCACTGGCTAGCTaGGGCCTCTTCAGAGCTTGG +
Preference number: 5 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYLPLAS*GLFRAW
Trigger: CCAAGCTCTGAAGAGGCCCAAGCTAGCCAGTGGGAG...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAAGTCTCCACGACCTATaGTTCAGAAAGAATCCCAGG +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSSLHDL*FRKNPR
Trigger: CCTGGGATTCTTTCTGAACAATAGGTCGTGGAGACT...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAAATGCAAGAGCACCTTaGTCACCCCTCAGCATCAAT +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSNARAP*SPLSIN
Trigger: ATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATT...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGACAGGCTGCTGGCTTCTaGCCAGTCAGCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRQAAGF*PVSLGF
Trigger: AAAACCCAAGCTGACTGGCAAGAAGCCAGCAGCCTG...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CCCAGATATGACTCCTCAATCCTCAGCTCCTTACAGCTAACCTACTTCTGTAGAAGGCACCCCAAAATCTaGGACGGGCTGATGACCGAT +
Preference number: 5 (lower is better)
Translates to: PRYDSSILSSLQLTYFCRRHPKI*DGLMTD
Trigger: ATCGGTCATCAGCCCGTCCAAGATTTTGGGGTGCCT...TCTACAGAAGTAGGTTAGCTGTAAGGAGCTGAGGATTGAGGAGTCATATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 90 bp CCAGCACTCTTTGGGCTTACCCTTGCAAATCAGTTCCAGGAGTCCTaGACTTCTCGTCCCGCTCATGGCACATTCATAGAAAGTTCCATT +
Preference number: 5 (lower is better)
Translates to: PALFGLTLANQFQES*TSRPAHGTFIESSI
Trigger: AATGGAACTTTCTATGAATGTGCCATGAGCGGGACGAGAAGTTCAGGACTCCTGGAACTGATTTGCAAGGGTAAGCCCAAAGAGTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS GCA 90 bp AAGATACTTTGTGAAGTTCTTCCCAGCACTCTTTGGGCTTACCCTTaGAAATCAGTTCCAGGAGTCCTGAACTTCTCGTCCCGCTCATGG +
Preference number: 5 (lower is better)
Translates to: KILCEVLPSTLWAYP*KSVPGVLNFSSRSW
Trigger: CCATGAGCGGGACGAGAAGTTCAGGACTCCTGGAACTGATTTGCAAGGGTAAGCCCAAAGAGTGCTGGGAAGAACTTCACAAAGTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATCAGCTTGGGTTTTCTaGAATGAGGCAGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRSAWVF*NEAVIV
Trigger: GACAATGACTGCCTCATTCAAGAAAACCCAAGCTGA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGATGGCTGCAATGATTaGATTAGGGCCATAGATCTG +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSDGCND*IRAIDL
Trigger: CAGATCTATGGCCCTAATCAAATCATTGCAGCCATC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGAATAGAAAGGTATCCTaGAATGAATGGAAAGGCACC +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMNRKVS*NEWKGT
Trigger: GGTGCCTTTCCATTCATTCAAGGATACCTTTCTATT...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGGAAAATGCTGTGCCTTaGTTATTGGCAGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMENAVP*LLAEQL
Trigger: CAGCTGCTCTGCCAATAACAAAGGCACAGCATTTTC...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCTAAGTTGCAGACCATaGTCCACCACTCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYLSCRP*STTLWR
Trigger: CCTCCACAGAGTGGTGGACAATGGTCTGCAACTTAG...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGCTCAAGGGAGCTTATTaGCACTTTCCACCATGGAAG +
Preference number: 5 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMLKGAY*HFPPWK
Trigger: CTTCCATGGTGGAAAGTGCAAATAAGCTCCCTTGAG...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAGCTCCCTGTGTCAGGCGCAGCCTCTAGGGAGCACATCCAAAGACAACTAATGTTAATATCCTCTGGCTaGTACAACAGGGGATATTTA +
Preference number: 5 (lower is better)
Translates to: QLPVSGAASREHIQRQLMLISSG*YNRGYL
Trigger: TAAATATCCCCTGTTGTACAAGCCAGAGGATATTAA...CATTAGTTGTCTTTGGATGTGCTCCCTAGAGGCTGCGCCTGACACAGGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGCAACACCATGAGTCATaGATGGTGGATGAGCTACAT +
Preference number: 5 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMQHHES*MVDELH
Trigger: ATGTAGCTCATCCACCATCAATGACTCATGGTGTTG...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGATATGTTAAGAGTAACTaGCTCACTCACAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRYVKSN*LTHKPL
Trigger: CAATGGCTTGTGAGTGAGCAAGTTACTCTTAACATA...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTTACCAGACACATCACTaGGGAGGTCCCAAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: GPHILKSLLSKPVHPAASYQTHH*GGPKGF
Trigger: AAAACCTTTGGGACCTCCCAAGTGATGTGTCTGGTA...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGAGAAAGTCCCTGGACTaGAGGGTGGCAGGAATATCC +
Preference number: 5 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQRKSLD*RVAGIS
Trigger: GGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCAGGTTCCTTTGCCTTaGGCTCTGGGATTTGTACCA +
Preference number: 5 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYQVPLP*ALGFVP
Trigger: TGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTG...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GCCCTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACTTGCAACCTGGAAAATaGCTCTCACCAGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: ALGNKNFRFLCLWLWDLYLQPGK*LSPEPE
Trigger: CTCAGGTTCTGGTGAGAGCAATTTTCCAGGTTGCAA...GTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGAAAGTCCCTGGACTTGAGGGTGGCAGGAATATCCCCCAGATATGACTCCTCAGACAGAATCAGCATTTaGTGCCATGAAATTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RKSLDLRVAGISPRYDSSDRISI*CHEIFP
Trigger: AGGAAAAATTTCATGGCACAAAATGCTGATTCTGTC...TGAGGAGTCATATCTGGGGGATATTCCTGCCACCCTCAAGTCCAGGGACTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGACTTCTCTACAAAGCCTGCAGCCTCCACTGGAGTGGGTCAAATGTTTGGAGACTTATCTATTGGCCCTaGGAAATAAAAACTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GLLYKACSLHWSGSNVWRLIYWP*EIKTSG
Trigger: ACCTGAAGTTTTTATTTCCAAGGGCCAATAGATAAG...TCTCCAAACATTTGACCCACTCCAGTGGAGGCTGCAGGCTTTGTAGAGAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGCTTTTATTCTCACTGTaGGTTGGACTTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMLLFSL*VGLPGS
Trigger: AGAACCAGGAAGTCCAACCAACAGTGAGAATAAAAG...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 90 bp TCATTGACGGTAGGTAGCATGCTAGTTTTGCCACAAGATACTTTGTaGAGTTCTTCCCAGCACTCTTTGGGCTTACCCTTGCAAATCAGT +
Preference number: 5 (lower is better)
Translates to: SLTVGSMLVLPQDTL*SSSQHSLGLPLQIS
Trigger: ACTGATTTGCAAGGGTAAGCCCAAAGAGTGCTGGGAAGAACTTCACAAAGTATCTTGTGGCAAAACTAGCATGCTACCTACCGTCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAATCTTTGGGCTTACCCTaGCAAATCAGTTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKSLGLP*QISSRS
Trigger: ACTCCTGGAACTGATTTGCAAGGGTAAGCCCAAAGA...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GGTCCACACATTTTAAAGTCTCTGCTATCAAAGCCAGTTCATCCTGCTGCCTCTGAATTTCCTCTGGGATaGATTGAGACTCCACTTGTA +
Preference number: 5 (lower is better)
Translates to: GPHILKSLLSKPVHPAASEFPLG*IETPLV
Trigger: TACAAGTGGAGTCTCAATCAATCCCAGAGGAAATTC...AGAGGCAGCAGGATGAACTGGCTTTGATAGCAGAGACTTTAAAATGTGTGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAAGTCAGCAAGCAGTTaGCAACCTGGAAAATTGCTC +
Preference number: 5 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKKSASS*QPGKLL
Trigger: GAGCAATTTTCCAGGTTGCAAACTGCTTGCTGACTT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CAATGCAAGAGCACCTTTGTCACCCCTCAGCATCAATTTGAGCACATCCTGATGCTTGTAGGATTCAGTTaGCCATCATGTTTCATGTTA +
Preference number: 5 (lower is better)
Translates to: QCKSTFVTPQHQFEHILMLVGFS*PSCFML
Trigger: TAACATGAAACATGATGGCAAACTGAATCCTACAAG...CATCAGGATGTGCTCAAATTGATGCTGAGGGGTGACAAAGGTGCTCTTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AGCCCAAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGTATACTGTTGTACTGTaGGTTCTGTTTCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SPRTLPYASSLDLEETVMYTVVL*VLFLWR
Trigger: TCTCCAGAGAAACAGAACCAACAGTACAACAGTATA...CATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTTGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAAGTTTCAGTTCTTCATaGACGGTAGGTAGCATGCTA +
Preference number: 5 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKSFSSS*TVGSML
Trigger: TAGCATGCTACCTACCGTCAATGAAGAACTGAAACT...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATGAATATCTGAGACAATaGGAGCCATTGGGATCTCTC +
Preference number: 5 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHEYLRQ*EPLGSL
Trigger: GAGAGATCCCAATGGCTCCAATTGTCTCAGATATTC...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATATGAGTGGCTTCAAATaGCATAGGTCTGACCCCATT +
Preference number: 5 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHMSGFK*HRSDPI
Trigger: AATGGGGTCAGACCTATGCAATTTGAAGCCACTCAT...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp CTTGGAAATAAAAACTTCAGGTTCCTTTGCCTTTGGCTCTGGGATTTGTACCATATCCTGATGTTCCACTaGAGAGCTTCAAAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: LGNKNFRFLCLWLWDLYHILMFH*RASKQF
Trigger: AAACTGCTTTGAAGCTCTCAAGTGGAACATCAGGAT...ATGGTACAAATCCCAGAGCCAAAGGCAAAGGAACCTGAAGTTTTTATTTCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGTCTGCCATATTTTATaGGTTCATAAGGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKVCHIL*VHKVRF
Trigger: GAATCTGACCTTATGAACCAATAAAATATGGCAGAC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp AAGGACCCTTCCATATGCTTCAAGTCTAGACCTAGAAGAGACTGTTATGGCAAAGTTATCAAATTTAGCTaGAACTGGAATCAGCTAGGA +
Preference number: 5 (lower is better)
Translates to: KDPSICFKSRPRRDCYGKVIKFS*NWNQLG
Trigger: TCCTAGCTGATTCCAGTTCAAGCTAAATTTGATAAC...TTTGCCATAACAGTCTCTTCTAGGTCTAGACTTGAAGCATATGGAAGGGTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGCACGTAGCATCTGCTTaGATTTTTAGTGATGCTAAT +
Preference number: 5 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQHVASA*IFSDAN
Trigger: ATTAGCATCACTAAAAATCAAAGCAGATGCTACGTG...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGTCTTGTTACAGTTGGTaGTTGGAAACAGGATACAAA +
Preference number: 5 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQSCYSW*LETGYK
Trigger: TTTGTATCCTGTTTCCAACAACCAACTGTAACAAGA...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS-3UTR CAA 90 bp GTAATAAAGAAAGAAATAGAGATGGCATCAGAAATCAGGCTGTGGCCACCTCAGGATATCTTGTTACAGTaGGTTGTTGGAAACAGGATA +
Preference number: 5 (lower is better)
Translates to: VIKKEIEMASEIRLWPPQDILLQ*VVGNRI
Trigger: TATCCTGTTTCCAACAACCAACTGTAACAAGATATC...CTGAGGTGGCCACAGCCTGATTTCTGATGCCATCTCTATTTCTTTCTTTATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS GCA 72 bp AGGACCATTGTCGTCTCATCATCCTCAGGGCTAAGTTaGAGACCATTGTCCACCACTCTGTGGAGGGTGCTA +
Preference number: 6 (lower is better)
Translates to: RTIVVSSSSGLS*RPLSTTLWRVL
Trigger: TAGCACCCTCCACAGAGTGGTGGACAATGGTCTGCAACTTAGCCCTGAGGATGATGAGACGACAATGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS CAA 72 bp AAGGACCATTGTCGTCTCATCATCCTCAGGGCTAAGTaGCAGACCATTGTCCACCACTCTGTGGAGGGTGCT +
Preference number: 6 (lower is better)
Translates to: KDHCRLIILRAK*QTIVHHSVEGA
Trigger: AGCACCCTCCACAGAGTGGTGGACAATGGTCTGCAACTTAGCCCTGAGGATGATGAGACGACAATGGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS CAA 90 bp TTCCTGGGATTCACACAGCAGCCTGTGAAGAGTCTCCACGACCTATaGTTCAGAAAGAATCCCAGGATCAGTAACACCCAGGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: FLGFTQQPVKSLHDL*FRKNPRISNTQAGA
Trigger: TGCTCCTGCCTGGGTGTTACTGATCCTGGGATTCTTTCTGAACAATAGGTCGTGGAGACTCTTCACAGGCTGCTGTGTGAATCCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS CAA 90 bp AGTACCCACAAGGACCATTGTCGTCTCATCATCCTCAGGGCTAAGTaGCAGACCATTGTCCACCACTCTGTGGAGGGTGCTATAGTGTTG +
Preference number: 6 (lower is better)
Translates to: STHKDHCRLIILRAK*QTIVHHSVEGAIVL
Trigger: CAACACTATAGCACCCTCCACAGAGTGGTGGACAATGGTCTGCAACTTAGCCCTGAGGATGATGAGACGACAATGGTCCTTGTGGGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 72 bp TCGTCCCGCTCATGGCACATTCATAGAAAGTTCCATTaGGCAGAGCCACAGAAAGCCACATCACTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: SSRSWHIHRKFH*AEPQKATSLEP
Trigger: TGGCTCCAGTGATGTGGCTTTCTGTGGCTCTGCTCAATGGAACTTTCTATGAATGTGCCATGAGCGGGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS GCA 72 bp TGTGAAGTTCTTCCCAGCACTCTTTGGGCTTACCCTTaGAAATCAGTTCCAGGAGTCCTGAACTTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: CEVLPSTLWAYP*KSVPGVLNFSS
Trigger: GGACGAGAAGTTCAGGACTCCTGGAACTGATTTGCAAGGGTAAGCCCAAAGAGTGCTGGGAAGAACTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS TCA 72 bp TTTGGGCTTACCCTTGCAAATCAGTTCCAGGAGTCCTaGACTTCTCGTCCCGCTCATGGCACATTCATAGAA +
Preference number: 6 (lower is better)
Translates to: FGLTLANQFQES*TSRPAHGTFIE
Trigger: TTCTATGAATGTGCCATGAGCGGGACGAGAAGTTCAGGACTCCTGGAACTGATTTGCAAGGGTAAGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS CAA 90 bp TTAGGAGGATCACAGAATGAGCATGCCACTCAACACCATGAGTCATaGATGGTGGATGAGCTACATATTGTGGGCAGTACCCACAAGGAC +
Preference number: 6 (lower is better)
Translates to: LGGSQNEHATQHHES*MVDELHIVGSTHKD
Trigger: GTCCTTGTGGGTACTGCCCACAATATGTAGCTCATCCACCATCAATGACTCATGGTGTTGAGTGGCATGCTCATTCTGTGATCCTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4
CDS CAA 72 bp TCACAGAATGAGCATGCCACTCAACACCATGAGTCATaGATGGTGGATGAGCTACATATTGTGGGCAGTACC +
Preference number: 6 (lower is better)
Translates to: SQNEHATQHHES*MVDELHIVGST
Trigger: GGTACTGCCCACAATATGTAGCTCATCCACCATCAATGACTCATGGTGTTGAGTGGCATGCTCATTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368599.4