RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122786

Ensembl transcript IDs: ENST00000361675.7, ENST00000361901.6, ENST00000393118.6, ENST00000417172.5, ENST00000422748.5, ENST00000424922.5, ENST00000430085.5, ENST00000435928.1, ENST00000436461.6, ENST00000443197.5, ENST00000445569.6, ENST00000454108.5, ENST00000466704.1, ENST00000472096.1, ENST00000473714.1, ENST00000475772.5, ENST00000478075.1, ENST00000480638.1, ENST00000482470.5, ENST00000489019.6, ENST00000495522.1, ENST00000496024.1, ENST00000498254.5

Found 1137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCCTTGGTGTCCACGCTGGCCCTCCCT +
Preference number: 1 (lower is better)
Translates to: PRRRRSSSSLLPAST*GAPSASLVSTLALP
Trigger: AGGGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 90 bp TCCTCCTCTCTGAGTTTTCGATCGGCTTCCTCCTGCTTCCTCCTCTaGTCTTCCTCCTCCAGGACCTTCCTTCTCTCCTCCCTCTTTTTC +
Preference number: 1 (lower is better)
Translates to: SSSLSFRSASSCFLL*SSSSRTFLLSSLFF
Trigger: GAAAAAGAGGGAGGAGAGAAGGAAGGTCCTGGAGGAGGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCGAAAACTCAGAGAGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 90 bp GAACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTC +
Preference number: 1 (lower is better)
Translates to: ELSQTLVGEVTLSTD*FSQRFRLLDTSPGL
Trigger: GAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR TCA 90 bp CAAGCCAGCAGTTTCCTTATTTGGTGTGCCTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTCCCACATACTCTTGATGTTGCGTAC +
Preference number: 1 (lower is better)
Translates to: QASSFLIWCACCSGG*KHIPFLPHTLDVAY
Trigger: GTACGCAACATCAAGAGTATGTGGGAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCAGGCACACCAAATAAGGAAACTGCTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 90 bp TGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGCACAGA +
Preference number: 1 (lower is better)
Translates to: CTGILLQSAVNLGDY*CLMGRFDTTAFLHR
Trigger: TCTGTGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 90 bp ACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGACACCACTGCTTTTCTGCACAGACTT +
Preference number: 1 (lower is better)
Translates to: TGILLQSAVNLGDYC*LMGRFDTTAFLHRL
Trigger: AAGTCTGTGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR TCA 90 bp GTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTTaGTGGGTCGATTTGACACCACTGCTTTTCTGCACAGACTTATTC +
Preference number: 1 (lower is better)
Translates to: VYCSSLLSILETIAA*WVDLTPLLFCTDLF
Trigger: GAATAAGTCTGTGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR TCA 90 bp GTAAATTCTGATTTAGCTTATTGTAGACTTGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGGC +
Preference number: 1 (lower is better)
Translates to: VNSDLAYCRLVPTLS*GFDFCILHGFPSFG
Trigger: GCCAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTCTACAATAAGCTAAATCAGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR GCA 90 bp GTATTCTCAGTATGTTTAAGTTTGTGGGTCATGAATTCTCCATTCTaGGACTTAACTTCTGTAAATCCCTTCTTTCGATCCATGAAGCTC +
Preference number: 1 (lower is better)
Translates to: VFSVCLSLWVMNSPF*DLTSVNPFFRSMKL
Trigger: GAGCTTCATGGATCGAAAGAAGGGATTTACAGAAGTTAAGTCGCAGAATGGAGAATTCATGACCCACAAACTTAAACATACTGAGAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 90 bp CTTTCCTTCCTTTGGCTTAGGTTTGCTAAAGCTAGAAGATTCAATTaGTCTTTACAGACTTATGAGGAAGATAGACTTTGTAACGCAGAT +
Preference number: 1 (lower is better)
Translates to: LSFLWLRFAKARRFN*SLQTYEEDRLCNAD
Trigger: ATCTGCGTTACAAAGTCTATCTTCCTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGAAGGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR CAA 90 bp TGCTCTTCCTCCTCCAGGACCTTCCTTCTCTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAAGCCGCCTCCTGCTGCTTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: CSSSSRTFLLSSLFF*SSSSSKAASCCFCL
Trigger: CAAACAGAAGCAGCAGGAGGCGGCTTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGAGAGAAGGAAGGTCCTGGAGGAGGAAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR TCA 90 bp TCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCACCTGGGTTTTCATCTTTGATCTaGTTTTCTCCAATGCTCCCT +
Preference number: 2 (lower is better)
Translates to: SPRDDDEAPPAFCRLPPGFSSLI*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGATCAAAGATGAAAA...CCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR TCA 90 bp CAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: QIAFPRGSACWIRLLVSSARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...ACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR CAA 90 bp GGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: GEVTLSTDCFSQRFR*LDTSPGLKSEGLGA
Trigger: TGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CAA 90 bp GGAACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCT +
Preference number: 2 (lower is better)
Translates to: GTVSNLSGGSDLIHR*LFPEVPLAGYVSWS
Trigger: AGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR-3UTR CCA 90 bp ACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: TTELVLRLELGFFLELSQNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...TTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR GCA 90 bp GGTTTTGCGCTTTTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: GFALFVPSIALVYCSSLLQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...CAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAAGCGCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR GCA 90 bp AATCTTGGAGACTATTGCTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: NLGDYCCLMGRFDTTAFLPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 2 (lower is better)
Translates to: STTELVLRLELGFFLELSAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CAA 90 bp GATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTAGTTAGCCATTCATTGATGCGGCTA +
Preference number: 2 (lower is better)
Translates to: DTSPGLKSEGLGAGD*FPSGVLVSHSLMRL
Trigger: TAGCCGCATCAATGAATGGCTAACTAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR TCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR TCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR TCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR TCA 90 bp TTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: FVPSIALVYCSSLLSILESLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...CTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR GCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp ACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 2 (lower is better)
Translates to: TTELVLRLELGFFLELSQRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...TTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR-3UTR CCA 90 bp GGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGACTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 2 (lower is better)
Translates to: GGSDLIHRLLFPEVPLAGLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...TCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR CAA 90 bp ATGCTCCCTCGCTTTGGCTTCTCCTCTTCCTCCTCCTCCTTTTCCTaGTCTTCTTTCTTGTTTTCTTCAGCATCCCTCCAATCATTCTTC +
Preference number: 2 (lower is better)
Translates to: MLPRFGFSSSSSSFS*SSFLFSSASLQSFF
Trigger: GAAGAATGATTGGAGGGATGCTGAAGAAAACAAGAAAGAAGACAAGGAAAAGGAGGAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR CAA 90 bp GGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTaGATGGGTCGATTTGACACCACTGCTTTTCTGCACAGACTTATT +
Preference number: 2 (lower is better)
Translates to: GILLQSAVNLGDYCC*MGRFDTTAFLHRLI
Trigger: AATAAGTCTGTGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR GCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 2 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR-3UTR GCA 90 bp AATCTTGGAGACTATTGCTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 2 (lower is better)
Translates to: NLGDYCCLMGRFDTTAFLTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCATCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 2 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 2 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CAA 90 bp GCTCGCTCTTCTATCTTGAGAGATGAACCTTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCTGACAAGCCATCTTCTGGCATCTTC +
Preference number: 2 (lower is better)
Translates to: ARSSILRDEPLGVKH*NGFLSSDKPSSGIF
Trigger: GAAGATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCATTCAAGTGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR TCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNVPTLS*GFDFCI
Trigger: AATGCAGAAGTCAAACCCTCATGACAAAGTAGGCAC...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 2 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACAATGACGGGAGTCAATaGTACCTGGGACACTTGTAT +
Preference number: 2 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNNDGSQ*YLGHLY
Trigger: ATACAAGTGTCCCAGGTAGCATTGACTCCCGTCATT...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp TCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 2 (lower is better)
Translates to: SNLSGGSDLIHRLLFPEVLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...AACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR-3UTR CCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 2 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCAAGAAAATAGTTATTTaGGAGGCTCCCTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFKKIVI*EAPSVW
Trigger: CCACACTGAGGGAGCCTCCCAAATAACTATTTTCTT...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443197.5
3UTR CAA 90 bp ATCTTGAGAGATGAACCTTTAGGAGTGAAACACTTGAATGGTTTCTaGTCATCTGACAAGCCATCTTCTGGCATCTTCTGGCGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ILRDEPLGVKHLNGF*SSDKPSSGIFWRFS
Trigger: TGAGAAACGCCAGAAGATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCATTCAAGTGTTTCACTCCTAAAGGTTCATCTCTCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR TCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCATCAAAGTACTGTCATaGCTCCTCAACACTGGATTT +
Preference number: 2 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFIKVLS*LLNTGF
Trigger: AAATCCAGTGTTGAGGAGTCATGACAGTACTTTGAT...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR TCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGAAGTCCACTGAGGTATaGGTTTATAGAACTCCACTG +
Preference number: 2 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLKSTEV*VYRTPL
Trigger: CAGTGGAGTTCTATAAACTCATACCTCAGTGGACTT...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: LSSYRSSGIENILIPICHQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 2 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 2 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443197.5
3UTR-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 2 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CAA 90 bp GATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGTATCACTGCTCAGATACAGAGTTAT +
Preference number: 2 (lower is better)
Translates to: DTAHIPQAILNLDLL*TSDVVGITAQIQSY
Trigger: ATAACTCTGTATCTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
3UTR-3UTR TCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTACTTGGATCTTCTGTTaGCTTCAGATGTGGTTGGTA +
Preference number: 2 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLTWIFC*LQMWLV
Trigger: TACCAACCACATCTGAAGTCAACAGAAGATCCAAGT...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCACTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 2 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAAGAAAATAGTTATTTaGGAGGCTCCCTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDKKIVI*EAPSVW
Trigger: CCACACTGAGGGAGCCTCCCAAATAACTATTTTCTT...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR CAA 90 bp TTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: FIFLDTAHIPQAILN*DLLLTSDVVGITAQ
Trigger: CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
3UTR-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGCTCAACACTGGATTTTaGTCACTTTACTTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWLNTGF*SLYFSA
Trigger: AGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAG...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCTCAACACTGGATTTTaGTCACTTTACTTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLLNTGF*SLYFSA
Trigger: AGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 2 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR CCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGAGTTATCTAAAATGTaGTTCAGGCTACTATCACTA +
Preference number: 2 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFELSKM*FRLLSL
Trigger: TAGTGATAGTAGCCTGAACCACATTTTAGATAACTC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATGGAGTCAATGCTACCTaGGACACTTGTATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDGVNAT*DTCICK
Trigger: TTTACAAATACAAGTGTCCCAGGTAGCATTGACTCC...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR CAA 90 bp TTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGGCTTAGGTTaGCTAAAGCTAGAAGATTCAATTGCTCTTTACAGACTTATGAGG +
Preference number: 2 (lower is better)
Translates to: FDFCILHGFPSFGLG*LKLEDSIALYRLMR
Trigger: CCTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR TCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 2 (lower is better)
Translates to: GFELGRDDSINKIHTGLQAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 2 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGGCTAGAAGATTCAATTaGTCTTTACAGACTTATGAG +
Preference number: 2 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWARRFN*SLQTYE
Trigger: CTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGC...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATGTTGAGACTCATACATaGAATTTCTGTCTGTACAAT +
Preference number: 2 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDVETHT*NFCLYN
Trigger: ATTGTACAGACAGAAATTCCATGTATGAGTCTCAAC...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 2 (lower is better)
Translates to: LVSLLRYRVMMISRKVSINLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTGGAGTCAATGCTACCTaGGACACTTGTATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVGVNAT*DTCICK
Trigger: TTTACAAATACAAGTGTCCCAGGTAGCATTGACTCC...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR CCA 72 bp CGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCCTTGGTGTCCACGCTG +
Preference number: 3 (lower is better)
Translates to: RRSSSSLLPAST*GAPSASLVSTL
Trigger: CAGCGTGGACACCAAGGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp CTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: LSVSPRRRRSSSSLLPASSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...GGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp TCTTCGCTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: SSLSVSPRRRRSSSSLLPSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...CGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAGCGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp AATCTTGGAGACTATTGCTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 3 (lower is better)
Translates to: NLGDYCCLMGRFDTTAFLAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: STTELVLRLELGFFLELSSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR GCA 72 bp CCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTCTCAAGTCCTGACCAG +
Preference number: 3 (lower is better)
Translates to: PYPQIAFPRGSA*WIRLLVSSPDQ
Trigger: CTGGTCAGGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
3UTR-3UTR CAA 90 bp ACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAACCGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 3 (lower is better)
Translates to: TELVLRLELGFFLELSQTDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...GGTTTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR-3UTR CAA 90 bp CGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGTGACTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 3 (lower is better)
Translates to: RLLDTSPGLKSEGLGAGDFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...GTCACCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 3 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CCA 72 bp TATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCAAGTCCTGACCAGACT +
Preference number: 3 (lower is better)
Translates to: YPQIAFPRGSAC*IRLLVSSPDQT
Trigger: AGTCTGGTCAGGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
3UTR GCA 72 bp CAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCT +
Preference number: 3 (lower is better)
Translates to: QTLVGEVTLSTD*FSQRFRLLDTS
Trigger: AGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR GCA 72 bp CCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: PYPQIAFPRGSA*WIRLLVSSQKV
Trigger: AACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CCA 72 bp TATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: YPQIAFPRGSAC*IRLLVSSQKVW
Trigger: CCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 72 bp CTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGACACCACTGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: LLQSAVNLGDYC*LMGRFDTTAFL
Trigger: CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp TCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 3 (lower is better)
Translates to: SNLSGGSDLIHRLLFPEVDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...AACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR-3UTR CAA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 3 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR CAA 90 bp CACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTTGATTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: HWYTAPVCCQSWRLLLLDSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR TCA 72 bp TCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTTaGTGGGTCGATTTGACACCACTGCTTTTCTGCACA +
Preference number: 3 (lower is better)
Translates to: SSLLSILETIAA*WVDLTPLLFCT
Trigger: TGTGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR GCA 72 bp TTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTATTGCTGCTTGATGGG +
Preference number: 3 (lower is better)
Translates to: LFPQLHWYTAPV*CQSWRLLLLDG
Trigger: CCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 3 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 3 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR GCA 72 bp ATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTTGACACCACTGCTTTT +
Preference number: 3 (lower is better)
Translates to: ILLQSAVNLGDY*CLMGRFDTTAF
Trigger: AAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 3 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR CAA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCCTCAACACTGGATTTaGCTCACTTTACTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFPQHWI*LTLLLC
Trigger: GCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGG...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 3 (lower is better)
Translates to: VGFELGRDDSINKIHTGLSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 3 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
3UTR-3UTR CAA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 3 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACGGCATTGAAAACATATaGATACCTATCTGCCATGTT +
Preference number: 3 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNGIENI*IPICHV
Trigger: AACATGGCAGATAGGTATCAATATGTTTTCAATGCC...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR TCA 72 bp GATTTAGCTTATTGTAGACTTGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATTCTTCATGGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: DLAYCRLVPTLS*GFDFCILHGFP
Trigger: AGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTCTACAATAAGCTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGGGCATTGAAAACATATaGATACCTATCTGCCATGTT +
Preference number: 3 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWGIENI*IPICHV
Trigger: AACATGGCAGATAGGTATCAATATGTTTTCAATGCC...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR GCA 72 bp GTATGTTTAAGTTTGTGGGTCATGAATTCTCCATTCTaGGACTTAACTTCTGTAAATCCCTTCTTTCGATCC +
Preference number: 3 (lower is better)
Translates to: VCLSLWVMNSPF*DLTSVNPFFRS
Trigger: GGATCGAAAGAAGGGATTTACAGAAGTTAAGTCGCAGAATGGAGAATTCATGACCCACAAACTTAAACATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR-3UTR CAA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTCTTTGTCATGAGGGTTaGACTTCTGCATTCTTCATG +
Preference number: 3 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVLCHEG*TSAFFM
Trigger: CATGAAGAATGCAGAAGTCAAACCCTCATGACAAAG...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR-3UTR CAA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTGATCAGGAGGAGCTCTaGTTCAAAAGTACAACAAAG +
Preference number: 3 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVDQEEL*FKSTTK
Trigger: CTTTGTTGTACTTTTGAACAAGAGCTCCTCCTGATC...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR TCA 72 bp AATGCTTCAGAGTATATAAAGATCAAAGTACTGTCATaGCTCCTCAACACTGGATTTTGCTCACTTTACTTC +
Preference number: 3 (lower is better)
Translates to: NASEYIKIKVLS*LLNTGFCSLYF
Trigger: GAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTTTGATCTTTATATACTCTGAAGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAGAGCGCGGCCAGGCTaGGTCTTCCATGCGATCCGG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELRARPG*VFHAIR
Trigger: CCGGATCGCATGGAAGACGCAGCCTGGCCGCGCTCT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGAAGAGCGCGGCCAGGCTaGGTCTTCCATGCGATCCGG +
Preference number: 4 (lower is better)
Translates to: GGSDLIHRLLFPEVPLAGRARPG*VFHAIR
Trigger: CCGGATCGCATGGAAGACGCAGCCTGGCCGCGCTCT...TCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR GCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACAGAGCGCGGCCAGGCTaGGTCTTCCATGCGATCCGG +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNRARPG*VFHAIR
Trigger: CCGGATCGCATGGAAGACGCAGCCTGGCCGCGCTCT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: STTELVLRLELGFFLELSPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TCTTCGCTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SSLSVSPRRRRSSSSLLPSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...CGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAGCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELQALQE*GLIIPF
Trigger: GAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp TCTTCGCTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: SSLSVSPRRRRSSSSLLPIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...CGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAGCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCAGACCGCCCTTCCTTaGCCCCTCCCAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSQTALP*PLPEVH
Trigger: ATGGACTTCTGGGAGGGGCCAAGGAAGGGCGGTCTG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TCTTCGCTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLSVSPRRRRSSSSLLPFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...CGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAGCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QIAFPRGSACWIRLLVSSRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...ACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCTTCGCTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SSLSVSPRRRRSSSSLLPLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...CGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAGCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCAGCAATCAGATGTCTaGGCCTTCTGGTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELQQSDV*AFWLVT
Trigger: GGTGACCAACCAGAAGGCTCAGACATCTGATTGCTG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR TCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACCAGCAATCAGATGTCTaGGCCTTCTGGTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNQQSDV*AFWLVT
Trigger: GGTGACCAACCAGAAGGCTCAGACATCTGATTGCTG...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR TCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAACCGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TELVLRLELGFFLELSQTARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...GGTTTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCAACCTTGCCCTCTCTaGCTCAGCTCTTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSQPCPL*LSSFLV
Trigger: GACAAGGAAAGAGCTGAGGCAGAGAGGGCAAGGTTG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCGGGAGGCGGTGGTATaGATTGTCCTGTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSREAVV*IVLSFF
Trigger: GAAAAACGACAGGACAATGCATACCACCGCCTCCCG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCAGCATGTCCGCAGTTaGGAAGGGGCGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVQHVRS*EGAAGQ
Trigger: CTGCCCCGCCGCCCCTTCCCAACTGCGGACATGCTG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGATGCAGCCTGCCTGTaGAGATGCCTGTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCDAACL*RCLSFP
Trigger: AGGGAATGACAGGCATCTCCACAGGCAGGCTGCATC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGTAGGCGATTCTTTCTaGTTCGAGTCGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSVGDSF*FESHLL
Trigger: GAGGAGATGCGACTCGAAGCAGAAAGAATCGCCTAC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACAGGAAGATCCGAGGCTGCCGGCTTTGTAGGTTTTGCGCTTTTTGTTCCCTCACAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TGRSEAAGFVGFALFVPSQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...TGAGGGAACAAAAAGCGCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGATCTGTGGCTGAAATaGACGGTGCAGGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYDLWLK*TVQDAP
Trigger: GGGAGCATCCTGCACCGTGCATTTCAGCCACAGATC...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSEPSG*SPIPVE
Trigger: TTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR CCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSPLECL*WLSWPP
Trigger: AGGAGGCCAAGACAACCACCACAAACACTCAAGTGG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELPLECL*WLSWPP
Trigger: AGGAGGCCAAGACAACCACCACAAACACTCAAGTGG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: STDCFSQRFRLLDTSPGLPLECL*WLSWPP
Trigger: AGGAGGCCAAGACAACCACCACAAACACTCAAGTGG...GAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TTAAGTTTGTGGGTCATGAATTCTCCATTCTGCGACTTAACTTCTGTAAATCCCTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLWVMNSPFCDLTSVNPLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...GGGATTTACAGAAGTTAAGTCGCAGAATGGAGAATTCATGACCCACAAACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCAGCATGTCCGCAGTTaGGAAGGGGCGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLQHVRS*EGAAGQ
Trigger: CTGCCCCGCCGCCCCTTCCCAACTGCGGACATGCTG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCACGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QIAFPRGSACWIRLLVSSCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...ACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR TCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTCCATTTCACTCCAATaGCGGGAGTCAATGCTACCT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSSISLQ*RESMLP
Trigger: AGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACCATGTGATCTGTGGCTaGAATGCACGGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYHVICG*NARCRM
Trigger: CATCCTGCACCGTGCATTTCAGCCACAGATCACATG...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGTAGGCGATTCTTTCTaGTTCGAGTCGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCVGDSF*FESHLL
Trigger: GAGGAGATGCGACTCGAAGCAGAAAGAATCGCCTAC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TTELVLRLELGFFLELSQRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...TTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTAGAGCGCGGCCAGGCTaGGTCTTCCATGCGATCCGG +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCRARPG*VFHAIR
Trigger: CCGGATCGCATGGAAGACGCAGCCTGGCCGCGCTCT...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCPLECL*WLSWPP
Trigger: AGGAGGCCAAGACAACCACCACAAACACTCAAGTGG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTTGCATTCTTCTGCTTaGGAGCGACAGACTTGCATC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNLHSSA*ERQTCI
Trigger: GATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGCATTCTTCTGCTTaGGAGCGACAGACTTGCATC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELLHSSA*ERQTCI
Trigger: GATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: STTELVLRLELGFFLELSVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: STTELVLRLELGFFLELSRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAGAGATACGGAGACCTaGCCAGGCCGGGCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLRDTET*PGRAVR
Trigger: CCTGACCGCCCGGCCTGGCCAGGTCTCCGTATCTCT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSKSSMV*FQVQGD
Trigger: GTCTCCCTGAACCTGAAATCACACCATGGATGATTT...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELKSSMV*FQVQGD
Trigger: GTCTCCCTGAACCTGAAATCACACCATGGATGATTT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR TCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361901.6
ENST00000417172.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp CGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGTGACGCTCAAAATCATCCATaGTGTGATTTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RLLDTSPGLKSEGLGAGDAQNHP*CDFRFR
Trigger: CCTGAACCTGAAATCACACCATGGATGATTTTGAGC...GTCACCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAACCTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TELVLRLELGFFLELSQTCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...GGTTTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCCTTGGTGTCCACGCTaGCCCTCCCTCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIPWCPR*PSLQGG
Trigger: GCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGTTGCCGGCTTCCACCTaGGGGGCGCCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVLPAST*GAPSAS
Trigger: GGAGGCTGAGGGCGCCCCCCAGGTGGAAGCCGGCAA...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACAGGAAGATCCGAGGCTGCCGGCTTTGTAGGTTTTGCGCTTTTTGTTCCCTCAGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TGRSEAAGFVGFALFVPSAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...TGAGGGAACAAAAAGCGCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CAA 72 bp TCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTC +
Preference number: 4 (lower is better)
Translates to: SNLSGGSDLIHR*LFPEVPLAGYV
Trigger: GACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
3UTR CAA 72 bp ACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TLSTDCFSQRFR*LDTSPGLKSEG
Trigger: ACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCKSSMV*FQVQGD
Trigger: GTCTCCCTGAACCTGAAATCACACCATGGATGATTT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTTGATAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HWYTAPVCCQSWRLLLLDRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAAGTCCACTGAGGTATaGGTTTATAGAACTCCACTG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELKSTEV*VYRTPL
Trigger: CAGTGGAGTTCTATAAACTCATACCTCAGTGGACTT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTTTGTCATGAGGGTTTaGCTTCTGCATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNFVMRV*LLHSSW
Trigger: CCATGAAGAATGCAGAAGTCAAACCCTCATGACAAA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGACGCGGAGGGGCCATGTaGTCTGTGGCTGAAATGCAC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRRGGAM*SVAEMH
Trigger: GTGCATTTCAGCCACAGATCACATGGCCCCTCCGCG...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCISSLF*LLSSLR
Trigger: TCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGAT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSSSCF*RSRSCR
Trigger: CCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDQALQE*GLIIPF
Trigger: GAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVQALQE*GLIIPF
Trigger: GAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTG...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCQALQE*GLIIPF
Trigger: GAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCCAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSQALQE*GLIIPF
Trigger: GAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTG...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGACAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRQALQE*GLIIPF
Trigger: GAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTG...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCAGGCTGCGTCTTCCATaGGATCCGGATCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSRLRLP*DPDPPS
Trigger: GCTGGGTGGATCCGGATCGCATGGAAGACGCAGCCT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGACCTGCATTTCAAGCTaGACACTAAATCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELTCISS*TLNPIR
Trigger: TCTGATGGGATTTAGTGTGCAGCTTGAAATGCAGGT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417172.5
CDS-3UTR CCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCGCCCTCAGCCTCCTTaGTGTCCACGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSRPQPP*CPRWPS
Trigger: GGAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACAAGAAAATAGTTATTTaGGAGGCTCCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNKKIVI*EAPSVW
Trigger: CCACACTGAGGGAGCCTCCCAAATAACTATTTTCTT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTAGAGATACGGAGACCTaGCCAGGCCGGGCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSRDTET*PGRAVR
Trigger: CCTGACCGCCCGGCCTGGCCAGGTCTCCGTATCTCT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
3UTR CAA 72 bp CTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTaGATGGGTCGATTTGACACCACTGCTTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LQSAVNLGDYCC*MGRFDTTAFLH
Trigger: GTGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGACGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTATCAAAGTACTGTCATaGCTCCTCAACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSIKVLS*LLNTGF
Trigger: AAATCCAGTGTTGAGGAGTCATGACAGTACTTTGAT...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCTTGAAATGTTCCAATaGTACCTGCATTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELLEMFQ*YLHFKL
Trigger: CAGCTTGAAATGCAGGTATCATTGGAACATTTCAAG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417172.5
CDS-3UTR TCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCTAATAGGCAGCCAATaGCGACACCCCAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLIGSQ*RHPSQG
Trigger: ACCTTGGCTGGGGTGTCGTCATTGGCTGCCTATTAG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: STDCFSQRFRLLDTSPGLHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...GAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR GCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTTCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: STTELVLRLELGFFLELSSDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGA...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAGGCTGCGTCTTCCATaGGATCCGGATCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDRLRLP*DPDPPS
Trigger: GCTGGGTGGATCCGGATCGCATGGAAGACGCAGCCT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGAGGCTGCGTCTTCCATaGGATCCGGATCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLRLRLP*DPDPPS
Trigger: GCTGGGTGGATCCGGATCGCATGGAAGACGCAGCCT...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTAGGCTGCGTCTTCCATaGGATCCGGATCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLRLRLP*DPDPPS
Trigger: GCTGGGTGGATCCGGATCGCATGGAAGACGCAGCCT...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGTTCCAATGATACCTaGATTTCAAGCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELCSNDT*ISSCTL
Trigger: TAGTGTGCAGCTTGAAATGCAGGTATCATTGGAACA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417172.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCTCAAAATCATCCATaGTGTGATTTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCAQNHP*CDFRFR
Trigger: CCTGAACCTGAAATCACACCATGGATGATTTTGAGC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GGTTTTGCGCTTTTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GFALFVPSIALVYCSSLLFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...CAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAAGCGCAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGGGCCATGTGATCTGTaGCTGAAATGCACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVGPCDL*LKCTVQ
Trigger: CTGCACCGTGCATTTCAGCCACAGATCACATGGCCC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp AATCTTGGAGACTATTGCTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NLGDYCCLMGRFDTTAFLCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATTTTCATCTTTGATCTaGTTTTCTCCAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GGSDLIHRLLFPEVPLAGFSSLI*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGATCAAAGATGAAAA...TCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHAPFPG*LLFIIV
Trigger: GACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGC...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTTGCTCGTTCATCTaGTATCTTTTTGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSCSFI*YLFVLL
Trigger: GAGCAAGACAAAAAGATAGCAGATGAACGAGCAAGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ACTTCTGTAAATCCCTTCTTTCGATCCATGAAGCTCTTAACTTCTTCTTTGGGTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TSVNPFFRSMKLLTSSLGPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...ACCCAAAGAAGAAGTTAAGAGCTTCATGGATCGAAAGAAGGGATTTACAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTATACTAGAACATTTTaGCAAGACACTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCYTRTF*QDTGGL
Trigger: GAGTCCTCCAGTGTCTTGGCAAAATGTTCTAGTATA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCATGCACGGTGCAGGATaGTCCCGTGTTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSMHGAG*SRVLPL
Trigger: CAAAGGGAGAACACGGGAGCATCCTGCACCGTGCAT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTAAGGTGGATGCAGCCTaGCTGTGGAGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCKVDAA*LWRCLS
Trigger: TGACAGGCATCTCCACAGGCAGGCTGCATCCACCTT...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTTTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: TTELVLRLELGFFLELSQVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...TTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCATTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp GCGCTTTTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ALFVPSIALVYCSSLLSISSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...GATTGACAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAAGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAACCCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: TELVLRLELGFFLELSQTLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...GGTTTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTGGGCCATGTGATCTGTaGCTGAAATGCACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLGPCDL*LKCTVQ
Trigger: CTGCACCGTGCATTTCAGCCACAGATCACATGGCCC...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTACACCCCAGCCAAGGTaGATGCAGCCTGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSTPQPR*MQPACG
Trigger: TCCACAGGCAGGCTGCATCCACCTTGGCTGGGGTGT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTACAGTCGGGAGGCGGTaGTATGCATTGTCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCTVGRR*YALSCR
Trigger: ACGACAGGACAATGCATACCACCGCCTCCCGACTGT...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CCA 90 bp TCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTAGTTTCATTTTCTGCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SNLSGGSDLIHRLLFPEVSFIFC*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGCAGAAAATGAAACT...AACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430085.5
3UTR CAA 72 bp CCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTAGTTAGCCATTCATTG +
Preference number: 4 (lower is better)
Translates to: PGLKSEGLGAGD*FPSGVLVSHSL
Trigger: CAATGAATGGCTAACTAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTAAGGAAGAGACCTTATaGCCTATTGTGAACTTCATT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCKEETL*PIVNFI
Trigger: AATGAAGTTCACAATAGGTCATAAGGTCTCTTCCTT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTTCATCTTTGATCTaGTTTTCTCCAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFSSLI*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGATCAAAGATGAAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361901.6
ENST00000417172.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCGCGGAGGGGCCATGTaGTCTGTGGCTGAAATGCAC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIRGGAM*SVAEMH
Trigger: GTGCATTTCAGCCACAGATCACATGGCCCCTCCGCG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACGTAGGCGATTCTTTCTaGTTCGAGTCGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNVGDSF*FESHLL
Trigger: GAGGAGATGCGACTCGAAGCAGAAAGAATCGCCTAC...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000361901.6
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTTTCTCTTCTAGCTaGTTGTTACGTTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFFSSS*LLRFCS
Trigger: AGAGCAGAAACGTAACAAGCAGCTAGAAGAGAAAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCACTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: FVPSIALVYCSSLLSILERNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...CTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGATGCACGGTGCAGGATaGTCCCGTGTTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLMHGAG*SRVLPL
Trigger: CAAAGGGAGAACACGGGAGCATCCTGCACCGTGCAT...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVSEPSG*SPIPVE
Trigger: TTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAATTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: GFELGRDDSINKIHTGLQLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTGTGGTGGTTGTCTTaGCCTCCTCGTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVLWWLS*PPRQAH
Trigger: GTGTGCCTGACGAGGAGGCCAAGACAACCACCACAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNPLECL*WLSWPP
Trigger: AGGAGGCCAAGACAACCACCACAAACACTCAAGTGG...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
CDS-3UTR CCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGAGTTATCTAAAATGTaGTTCAGGCTACTATCACTA +
Preference number: 4 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSELSKM*FRLLSL
Trigger: TAGTGATAGTAGCCTGAACCACATTTTAGATAACTC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGTTGAGACTCATACATaGAATTTCTGTCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: PSTTELVLRLELGFFLELVETHT*NFCLYN
Trigger: ATTGTACAGACAGAAATTCCATGTATGAGTCTCAAC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTATGACTCCTCAACACTaGATTTTGCTCACTTTACTT +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCMTPQH*ILLTLL
Trigger: AAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCAT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCATGCCAGCCCTGCCCTaGTTAGCTCTTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVMPALP*LALLEE
Trigger: TTCCTCCAGAAGAGCTAACCAGGGCAGGGCTGGCAT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAATGCCAGCCCTGCCCTaGTTAGCTCTTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GFELGRDDSINKIHTGLQMPALP*LALLEE
Trigger: TTCCTCCAGAAGAGCTAACCAGGGCAGGGCTGGCAT...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGATGCCAGCCCTGCCCTaGTTAGCTCTTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLMPALP*LALLEE
Trigger: TTCCTCCAGAAGAGCTAACCAGGGCAGGGCTGGCAT...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAACAGCAATCAGATGTCTaGGCCTTCTGGTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GFELGRDDSINKIHTGLQQQSDV*AFWLVT
Trigger: GGTGACCAACCAGAAGGCTCAGACATCTGATTGCTG...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000361901.6
CDS-3UTR TCA 90 bp ACTTCTGTAAATCCCTTCTTTCGATCCATGAAGCTCTTAACTTCTTCTTTGGGTCAGCAATCAGATGTCTaGGCCTTCTGGTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: TSVNPFFRSMKLLTSSLGQQSDV*AFWLVT
Trigger: GGTGACCAACCAGAAGGCTCAGACATCTGATTGCTG...ACCCAAAGAAGAAGTTAAGAGCTTCATGGATCGAAAGAAGGGATTTACAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTTCAGGGAGACCAGATaGTGTCTGGACAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLFRETR*CLDRSA
Trigger: TGCTGACCTGTCCAGACATCATCTGGTCTCCCTGAA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000361901.6
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGSSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIRSRAS*RRFWRL
Trigger: AAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TTTGACACCACTGCTTTTCTGCACAGACTTATTCAAAAATTCTGCTCGCTCTTCTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FDTTAFLHRLIQKFCSLFSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...GAAGAGCGAGCAGAATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp GGCTGCCGGCTTTGTAGGTTTTGCGCTTTTTGTTCCCTCAATTGCACTGGTATAGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: GCRLCRFCAFCSLNCTGIAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...TATACCAGTGCAATTGAGGGAACAAAAAGCGCAAAACCTACAAAGCCGGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCATGTGATCTGTGGCTaGAATGCACGGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLHVICG*NARCRM
Trigger: CATCCTGCACCGTGCATTTCAGCCACAGATCACATG...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp AATCTTGGAGACTATTGCTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: NLGDYCCLMGRFDTTAFLISSLF*LLSSLR
Trigger: TCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGAT...CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTAGGCGATTCTTTCTaGTTCGAGTCGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDVGDSF*FESHLL
Trigger: GAGGAGATGCGACTCGAAGCAGAAAGAATCGCCTAC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTCTGCTTCCAACCTTaGCCTCTCTGCCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVFCFQP*PLCLSS
Trigger: AGAGCTGAGGCAGAGAGGGCAAGGTTGGAAGCAGAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAAAGCCGCCTCCTGCTaGTTCTGTTTGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQKAASC*FCLSFS
Trigger: CGAGAAGCTCAAACAGAAGCAGCAGGAGGCGGCTTT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIRSASS*FLLCSS
Trigger: GGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSPRGSA*WIRLLV
Trigger: GACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSEPSG*SPIPVE
Trigger: TTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR CCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIAFTST*SVTCPK
Trigger: CTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GFELGRDDSINKIHTGLQNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDNAPSL*LLLFLL
Trigger: GAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAACCGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: TELVLRLELGFFLELSQTVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...GGTTTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCGTGTGCCTGCTGCAGTaGGGGATGAAAACACATTCC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVVCLLQ*GMKTHS
Trigger: GGAATGTGTTTTCATCCCCCACTGCAGCAGGCACAC...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGTCTCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: TVSNLSGGSDLIHRLLFPDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...TGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGAGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTATGACTCCTCAACACTaGATTTTGCTCACTTTACTT +
Preference number: 4 (lower is better)
Translates to: STTELVLRLELGFFLELSMTPQH*ILLTLL
Trigger: AAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCAT...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR TCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLSSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTACCATCACCTCTACCTaGTTTTCTCCAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGTITST*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGGTAGAGGTGATGGT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR TCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCATGGGAAATCTCATCTaGACCTTGTTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSMGNLI*TLFPLL
Trigger: GAGGAGAGGGAACAAGGTTCAGATGAGATTTCCCAT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAATCTCTTCCTCCTCTCTaGGTTTTCGATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GFELGRDDSINKIHTGLQSLPPL*VFDRLP
Trigger: AGGAAGCCGATCGAAAACTCAGAGAGGAGGAAGAGA...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGACTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
CDS-3UTR TCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGCTCGTCCTGCGTCTTaGGCTTGGGTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIARPAS*AWVLSG
Trigger: TCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTCCATTTCACTCCAATaGCGGGAGTCAATGCTACCT +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSSISLQ*RESMLP
Trigger: AGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCCATTTCACTCCAATaGCGGGAGTCAATGCTACCT +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSISLQ*RESMLP
Trigger: AGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCAAGGATTCTTCCTCCTaGTTCTGCCGCAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSKDSSS*FCRSRS
Trigger: GGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTT...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGAATGACGGGAGTCAATaGTACCTGGGACACTTGTAT +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVNDGSQ*YLGHLY
Trigger: ATACAAGTGTCCCAGGTAGCATTGACTCCCGTCATT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVSDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361901.6
ENST00000424922.5
ENST00000443197.5
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGATCTGTGGCTGAAATaGACGGTGCAGGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSDLWLK*TVQDAP
Trigger: GGGAGCATCCTGCACCGTGCATTTCAGCCACAGATC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGCCTGCCTGTGGAGATaGCTGTCATTCCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIACLWR*LSFPRH
Trigger: ATGCCTAGGGAATGACAGGCATCTCCACAGGCAGGC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSEPSG*SPIPVE
Trigger: TTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR CCA 90 bp AATTCTCCATTCTGCGACTTAACTTCTGTAAATCCCTTCTTTCGATCCATGAAGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: NSPFCDLTSVNPFFRSMKSEPSG*SPIPVE
Trigger: TTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGA...CTTCATGGATCGAAAGAAGGGATTTACAGAAGTTAAGTCGCAGAATGGAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCAGGCACACTGTTCTaGGCATTCACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSSGTLF*AFTSTW
Trigger: CCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDPLECL*WLSWPP
Trigger: AGGAGGCCAAGACAACCACCACAAACACTCAAGTGG...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTTGCATTCTTCTGCTTaGGAGCGACAGACTTGCATC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCLHSSA*ERQTCI
Trigger: GATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTTGCATTCTTCTGCTTaGGAGCGACAGACTTGCATC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLLHSSA*ERQTCI
Trigger: GATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTGAGTTATCTAAAATGTaGTTCAGGCTACTATCACTA +
Preference number: 4 (lower is better)
Translates to: STTELVLRLELGFFLELSELSKM*FRLLSL
Trigger: TAGTGATAGTAGCCTGAACCACATTTTAGATAACTC...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCATGCCAGCCCTGCCCTaGTTAGCTCTTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSMPALP*LALLEE
Trigger: TTCCTCCAGAAGAGCTAACCAGGGCAGGGCTGGCAT...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCCTGTGACGAAAGTCTaGGCTTGTCCTCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDPVTKV*ACPQPN
Trigger: ATTTGGCTGAGGACAAGCCCAGACTTTCGTCACAGG...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393118.6
CDS-3UTR TCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLKSSMV*FQVQGD
Trigger: GTCTCCCTGAACCTGAAATCACACCATGGATGATTT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR TCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTAGGTTTGGGAGCAGGTaGCTTGTTTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIRFGSR*LVSIWG
Trigger: ACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCT...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGACTTGGATCTTCTGTTaGCTTCAGATGTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVTWIFC*LQMWLV
Trigger: TACCAACCACATCTGAAGTCAACAGAAGATCCAAGT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTTTGTCATGAGGGTTTaGCTTCTGCATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLFVMRV*LLHSSW
Trigger: CCATGAAGAATGCAGAAGTCAAACCCTCATGACAAA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDVPTLS*GFDFCI
Trigger: AATGCAGAAGTCAAACCCTCATGACAAAGTAGGCAC...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGVPTLS*GFDFCI
Trigger: AATGCAGAAGTCAAACCCTCATGACAAAGTAGGCAC...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCTTGATGGGTCGATTTaGCACCACTTTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVLDGSI*HHFSAQ
Trigger: CTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGISSLF*LLSSLR
Trigger: TCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGAT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSISSLF*LLSSLR
Trigger: TCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGAT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQPDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGAC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDLGDYC*LMGRFD
Trigger: GTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCAGGAAGATCCGAGGCTaGCGGCTTTGTAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSRKIRG*RLCRFC
Trigger: GCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCT...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVTLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCAACTGAGCTCGTCCTaGGTCTTGAGCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSQLSSS*VLSLGS
Trigger: AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTAATGACGGGAGTCAATaGTACCTGGGACACTTGTAT +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLNDGSQ*YLGHLY
Trigger: ATACAAGTGTCCCAGGTAGCATTGACTCCCGTCATT...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGTCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWSDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGA...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361901.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCSDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361901.6
ENST00000424922.5
ENST00000443197.5
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTTGCATTCTTCTGCTTaGGAGCGACAGACTTGCATC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLLHSSA*ERQTCI
Trigger: GATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVRGSAC*IRLLVS
Trigger: TGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCT...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGCTGGATACGTCTCCTaGTCTCAAGTCCTGACCAGA +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSAGYVS*SQVLTR
Trigger: TCTGGTCAGGACTTGAGACCAGGAGACGTATCCAGC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
3UTR CAA 72 bp CTAGATACTGCACACATTCCGCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCAGATGTGGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: LDTAHIPQAILN*DLLLTSDVVGI
Trigger: GATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDKSSMV*FQVQGD
Trigger: GTCTCCCTGAACCTGAAATCACACCATGGATGATTT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR TCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATTCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHSSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTTCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSISSPST*VFVVVV
Trigger: GACAACCACCACAAACACTCAAGTGGAAGGGGATGA...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVSGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ACTTCTGTAAATCCCTTCTTTCGATCCATGAAGCTCTTAACTTCTTCTTTGGGTTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TSVNPFFRSMKLLTSSLGWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...ACCCAAAGAAGAAGTTAAGAGCTTCATGGATCGAAAGAAGGGATTTACAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVCCSGG*KHIPFL
Trigger: GAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCA...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTACTTGGATCTTCTGTTaGCTTCAGATGTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGTWIFC*LQMWLV
Trigger: TACCAACCACATCTGAAGTCAACAGAAGATCCAAGT...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTACTTGGATCTTCTGTTaGCTTCAGATGTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVTWIFC*LQMWLV
Trigger: TACCAACCACATCTGAAGTCAACAGAAGATCCAAGT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATAAGTCCACTGAGGTATaGGTTTATAGAACTCCACTG +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDKSTEV*VYRTPL
Trigger: CAGTGGAGTTCTATAAACTCATACCTCAGTGGACTT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTTTGTCATGAGGGTTTaGCTTCTGCATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGFVMRV*LLHSSW
Trigger: CCATGAAGAATGCAGAAGTCAAACCCTCATGACAAA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDVPTLS*GFDFCI
Trigger: AATGCAGAAGTCAAACCCTCATGACAAAGTAGGCAC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAGTGCCTACTTTGTCATaGGGGTTTGACTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: GFELGRDDSINKIHTGLQVPTLS*GFDFCI
Trigger: AATGCAGAAGTCAAACCCTCATGACAAAGTAGGCAC...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCCATTTCACTCCAATaGCGGGAGTCAATGCTACCT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSSISLQ*RESMLP
Trigger: AGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCTTGATGGGTCGATTTaGCACCACTTTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLDGSI*HHFSAQ
Trigger: CTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTCTGCTGTGTCATTTTaGATTCTTCTGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLSAVSF*ILLLGS
Trigger: GCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSPDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATTTTCCTTATTTGGTGTaGCTGCTGCAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHFPYLV*LLQWGM
Trigger: CATCCCCCACTGCAGCAGGCACACCAAATAAGGAAA...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAGAAACAGGCTCCTGTaGAAAGGCAGTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDRNRLL*KGSTFT
Trigger: GGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGCTCAACACTGGATTTTaGTCACTTTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLLNTGF*SLYFSA
Trigger: AGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAG...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAATGACGGGAGTCAATaGTACCTGGGACACTTGTAT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQNDGSQ*YLGHLY
Trigger: ATACAAGTGTCCCAGGTAGCATTGACTCCCGTCATT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCAATGACGGGAGTCAATaGTACCTGGGACACTTGTAT +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVNDGSQ*YLGHLY
Trigger: ATACAAGTGTCCCAGGTAGCATTGACTCCCGTCATT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGCTCAAAATCATCCATaGTGTGATTTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLAQNHP*CDFRFR
Trigger: CCTGAACCTGAAATCACACCATGGATGATTTTGAGC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR CCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTTGCATTCTTCTGCTTaGGAGCGACAGACTTGCATC +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLHSSA*ERQTCI
Trigger: GATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTACCACTGTTTCCTCCTaGCTTTCAGTTGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGTTVSS*LSVVFS
Trigger: AGAGAAAACAACTGAAAGCCAGGAGGAAACAGTGGT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTAAGAAAATAGTTATTTaGGAGGCTCCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGKKIVI*EAPSVW
Trigger: CCACACTGAGGGAGCCTCCCAAATAACTATTTTCTT...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGAAGAAAATAGTTATTTaGGAGGCTCCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLKKIVI*EAPSVW
Trigger: CCACACTGAGGGAGCCTCCCAAATAACTATTTTCTT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTTTGTGTTAACACGTTaGTCTGTCCCTGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLFVLTR*SVPVTK
Trigger: TTTCGTCACAGGGACAGACCAACGTGTTAACACAAA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393118.6
CDS-3UTR TCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTCTTGATGGGTCGATTTaGCACCACTGCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVLDGSI*HHCFSA
Trigger: TGCAGAAAAGCAGTGGTGTCAAATCGACCCATCAAG...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATTCTCCCACATACTCTTaGTGTTGCGTACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHSPTYS*CCVHLQ
Trigger: CTGAAGGTGTACGCAACATCAAGAGTATGTGGGAGA...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTACTTGGATCTTCTGTTaGCTTCAGATGTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLTWIFC*LQMWLV
Trigger: TACCAACCACATCTGAAGTCAACAGAAGATCCAAGT...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTTGTCATGAGGGTTTaGCTTCTGCATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVFVMRV*LLHSSW
Trigger: CCATGAAGAATGCAGAAGTCAAACCCTCATGACAAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTTTTCATCTTTGATCTaGTTTTCTCCAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLFSSLI*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGATCAAAGATGAAAA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361901.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIWERQT*ICYCWV
Trigger: GACCCAACAATAACAGATGCAAGTCTGTCGCTCCCA...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCATTTTGCATTCTTCTaGTTGGGAGCGACAGACTTG +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSHFAFF*LGATDL
Trigger: CAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTCCTGATTTTCTCCAATaGTCCCTCGCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVPDFLQ*SLALAS
Trigger: AGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGG...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000393118.6
CDS-3UTR GCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGCTATCTTTTTGTCTTaGTCGGCTTTAATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFAIFLS*SALILS
Trigger: AGAAAGAATTAAAGCCGAGCAAGACAAAAAGATAGC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTTCTGCTTCAATTCTTaGTCGTTCATCTGCTATCTT +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLFCFNS*SFICYL
Trigger: AAGATAGCAGATGAACGAGCAAGAATTGAAGCAGAA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTGCTTGTTACGTTTCTaGTCTTCTACCTTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLCLLRF*SSTLAF
Trigger: GAAGGCTAAGGTAGAAGAGCAGAAACGTAACAAGCA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSITLSTD*FSQRFR
Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGACATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSCICYC*VELLLP
Trigger: CGGCAGAAGGAGTTCGACCCAACAATAACAGATGCA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGGTCTGCTGTCAATCTTaGAGACTATTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQVCCQS*RLLLLD
Trigger: ATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGAC...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTTTCCCTCAATTGCACTaGTATACTGCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIFPQLH*YTAPVC
Trigger: GCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAA...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCAAGTCAGAAGGTTTaGGAGCAGGTGACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSSSQKV*EQVTCF
Trigger: GAAACAAGTCACCTGCTCCCAAACCTTCTGACTTGA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
CDS-3UTR CCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
CDS-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGCTGGATACGTCTCCTaGTCTCAAGTCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIAGYVS*SQVRRF
Trigger: AAACCTTCTGACTTGAGACCAGGAGACGTATCCAGC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGTTGAGACTCATACATaGAATTTCTGTCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFVETHT*NFCLYN
Trigger: ATTGTACAGACAGAAATTCCATGTATGAGTCTCAAC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCAAGAAAATAGTTATTTaGGAGGCTCCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVKKIVI*EAPSVW
Trigger: CCACACTGAGGGAGCCTCCCAAATAACTATTTTCTT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGAGTCAATGCTACCTaGGACACTTGTATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVGVNAT*DTCICK
Trigger: TTTACAAATACAAGTGTCCCAGGTAGCATTGACTCC...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGGAGTCAATGCTACCTaGGACACTTGTATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDGVNAT*DTCICK
Trigger: TTTACAAATACAAGTGTCCCAGGTAGCATTGACTCC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTTCTGGTAGGACTTGGTaGCTGTTTCTGTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSISGRTW*LFLFPL
Trigger: TAGAGGAAACAGAAACAGTCACCAAGTCCTACCAGA...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTGGTTTCTTGTCATCTaGCAAGCCATCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVWFLVI*QAIFWH
Trigger: ATGCCAGAAGATGGCTTGTCAGATGACAAGAAACCA...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TTTGACACCACTGCTTTTCTGCACAGACTTATTCAAAAATTCTGCTCGCTCTTCTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: FDTTAFLHRLIQKFCSLFFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...GAAGAGCGAGCAGAATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR TCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATAAGGAAGAGACCTTATaGCCTATTGTGAACTTCATT +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDKEETL*PIVNFI
Trigger: AATGAAGTTCACAATAGGTCATAAGGTCTCTTCCTT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACAAGTCCACTGAGGTATaGGTTTATAGAACTCCACTG +
Preference number: 4 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYKSTEV*VYRTPL
Trigger: CAGTGGAGTTCTATAAACTCATACCTCAGTGGACTT...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTTTTCATCTTTGATCTaGTTTTCTCCAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLFSSLI*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGATCAAAGATGAAAA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361901.6
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIISSLF*LLSSLR
Trigger: TCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGAT...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTTCTCAGCAGCTTCTaGTCTTCGCCTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSFLSSF*SSPFNL
Trigger: GAGATTGAAAGGCGAAGAGCAGAAGCTGCTGAGAAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATATTGCACTGGTATACTaGTCCAGTCTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHIALVY*SSLLSI
Trigger: GATTGACAGCAGACTGGAGCAGTATACCAGTGCAAT...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCTCAACACTGGATTTTaGTCACTTTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQLNTGF*SLYFSA
Trigger: AGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGCTCAACACTGGATTTTaGTCACTTTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLLNTGF*SLYFSA
Trigger: AGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAG...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTATACTAGAACATTTTaGCAAGACACTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDYTRTF*QDTGGL
Trigger: GAGTCCTCCAGTGTCTTGGCAAAATGTTCTAGTATA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACGCTAGAAGATTCAATTaGTCTTTACAGACTTATGAG +
Preference number: 4 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNARRFN*SLQTYE
Trigger: CTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGC...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CCA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGAGACTCATACATaGAATTTCTGTCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVVETHT*NFCLYN
Trigger: ATTGTACAGACAGAAATTCCATGTATGAGTCTCAAC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGATGACTCCTCAACACTaGATTTTGCTCACTTTACTT +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLMTPQH*ILLTLL
Trigger: AAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCAT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATTTTGCCAAGACACTaGAGGACTCTTTCATTATCT +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGILPRH*RTLSLS
Trigger: AGATAATGAAAGAGTCCTCCAGTGTCTTGGCAAAAT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTATTTTGCCAAGACACTaGAGGACTCTTTCATTATCT +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVILPRH*RTLSLS
Trigger: AGATAATGAAAGAGTCCTCCAGTGTCTTGGCAAAAT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTATTTTGCCAAGACACTaGAGGACTCTTTCATTATCT +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLILPRH*RTLSLS
Trigger: AGATAATGAAAGAGTCCTCCAGTGTCTTGGCAAAAT...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGGGAGTCAATGCTACCTaGGACACTTGTATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQGVNAT*DTCICK
Trigger: TTTACAAATACAAGTGTCCCAGGTAGCATTGACTCC...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
3UTR CAA 72 bp TGCATTCTTCATGGCTTTCCTTCCTTTGGCTTAGGTTaGCTAAAGCTAGAAGATTCAATTGCTCTTTACAGA +
Preference number: 4 (lower is better)
Translates to: CILHGFPSFGLG*LKLEDSIALYR
Trigger: TCTGTAAAGAGCAATTGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGAAGGAAAGCCATGAAGAATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: VGFELGRDDSINKIHTGLFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCACTTGGATCTTCTGTTaGCTTCAGATGTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSTWIFC*LQMWLV
Trigger: TACCAACCACATCTGAAGTCAACAGAAGATCCAAGT...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGAAGTCCACTGAGGTATaGGTTTATAGAACTCCACTG +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVKSTEV*VYRTPL
Trigger: CAGTGGAGTTCTATAAACTCATACCTCAGTGGACTT...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGAAGTCCATGCTAAGTaGACACATATCCCCTATGTT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIEVHAK*THIPYV
Trigger: AACATAGGGGATATGTGTTCACTTAGCATGGACTTC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR GCA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGCTTATTCAAAAATTCTaGTCGCTCTTCTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWLIQKF*SLFYLE
Trigger: CTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAG...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: NQHKYKTERISPLQLSSSTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTATACTGCTCCAGTCTaGTGTCAATCTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSYTAPV*CQSWRL
Trigger: TAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATTTTTGTTCCCTCAATTaGACTGGTATACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHFCSLN*TGILLQ
Trigger: CTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAA...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCATTTTTCTAGATACTaGACACATTCCGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSHFSRY*THSAGN
Trigger: ATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCTCAACACTGGATTTTaGTCACTTTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLNTGF*SLYFSA
Trigger: AGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTGCTCAAAATCATCCATaGTGTGATTTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVAQNHP*CDFRFR
Trigger: CCTGAACCTGAAATCACACCATGGATGATTTTGAGC...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000361901.6
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGCTCAAAATCATCCATaGTGTGATTTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSAQNHP*CDFRFR
Trigger: CCTGAACCTGAAATCACACCATGGATGATTTTGAGC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
ENST00000430085.5
CDS-3UTR CCA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGACTTCAGATGTGGTTaGTATCACTGCTCAGATACA +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVDFRCG*YHCSDT
Trigger: TGTATCTGAGCAGTGATACCAACCACATCTGAAGTC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATGAGTTATCTAAAATGTaGTTCAGGCTACTATCACTA +
Preference number: 4 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDELSKM*FRLLSL
Trigger: TAGTGATAGTAGCCTGAACCACATTTTAGATAACTC...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGATTTTGCCAAGACACTaGAGGACTCTTTCATTATCT +
Preference number: 4 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLILPRH*RTLSLS
Trigger: AGATAATGAAAGAGTCCTCCAGTGTCTTGGCAAAAT...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGTTGTTTAGGCTCTTCTaGACTGATCTGCCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVLFRLF*TDLPIF
Trigger: AAAAATGGGCAGATCAGTTCAGAAGAGCCTAAACAA...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR TCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTTCTATCTTGAGAGATaGACCTTTAGGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSFYLER*TFRSET
Trigger: TGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGCAGTACTTTTACCATaGACATCTCTAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIAVLLP*TSLDCD
Trigger: ATCACAGTCTAGAGATGTTCATGGTAAAAGTACTGC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR TCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTATCAAAGTACTGTCATaGCTCCTCAACACTGGATTT +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIIKVLS*LLNTGF
Trigger: AAATCCAGTGTTGAGGAGTCATGACAGTACTTTGAT...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
CDS-3UTR GCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSNLGDY*CLMGRF
Trigger: AAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR GCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTATACTAGAACATTTTaGCAAGACACTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVYTRTF*QDTGGL
Trigger: GAGTCCTCCAGTGTCTTGGCAAAATGTTCTAGTATA...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGCTAGAAGATTCAATTaGTCTTTACAGACTTATGAG +
Preference number: 4 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDARRFN*SLQTYE
Trigger: CTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LSSYRSSGIENILIPICHLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCTCTATTTCACAGCATaGGTTTCTTTAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSLYFTA*VSLETG
Trigger: GCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGGAGTTATCTAAAATGTaGTTCAGGCTACTATCACTA +
Preference number: 4 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQELSKM*FRLLSL
Trigger: TAGTGATAGTAGCCTGAACCACATTTTAGATAACTC...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGAAGGAAGAGACCTTATaGCCTATTGTGAACTTCATT +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVKEETL*PIVNFI
Trigger: AATGAAGTTCACAATAGGTCATAAGGTCTCTTCCTT...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTAAGGAAGAGACCTTATaGCCTATTGTGAACTTCATT +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVKEETL*PIVNFI
Trigger: AATGAAGTTCACAATAGGTCATAAGGTCTCTTCCTT...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR TCA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTTTCATCTTTGATCTaGTTTTCTCCAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LVNQHKYKTERISPLQLSFSSLI*FSPMLP
Trigger: AGGGAGCATTGGAGAAAATCAGATCAAAGATGAAAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361901.6
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
CDS-3UTR GCA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTACACCACTGCTTTTCTaGACAGACTTATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSTPLLF*TDLFKN
Trigger: ATTTTTGAATAAGTCTGTGCAGAAAAGCAGTGGTGT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
CDS-3UTR GCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTGCTAGAAGATTCAATTaGTCTTTACAGACTTATGAG +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSARRFN*SLQTYE
Trigger: CTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGC...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTATGACTCCTCAACACTaGATTTTGCTCACTTTACTT +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVMTPQH*ILLTLL
Trigger: AAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCAT...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR GCA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGCTAGAAGATTCAATTaGTCTTTACAGACTTATGAG +
Preference number: 4 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVARRFN*SLQTYE
Trigger: CTCATAAGTCTGTAAAGAGCAATTGAATCTTCTAGC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CCA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIVCLSL*VMNSPF
Trigger: GAATGGAGAATTCATGACCCACAAACTTAAACATAC...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS GCA 90 bp TCCACCTGGTCGGTCACCTGTCCCAAGGATTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: STWSVTCPKDSSSCF*RSRSCRARRRRSRA
Trigger: AGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTTGGGACAGGTGACCGACCAGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000435928.1
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000454108.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS GCA 90 bp TTCTGCTGGTCGGTCACCTGTCCCAAGGATTCTTCCTCCTGCTTCTaGCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: FCWSVTCPKDSSSCF*RSRSCRARRRRSRA
Trigger: AGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAAGAATCCTTGGGACAGGTGACCGACCAGCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS GCA 90 bp CTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTCATTCCTCTGGTAGGCGATTTGGCC +
Preference number: 5 (lower is better)
Translates to: LPQPFLSGSAAPFPG*LLFIIVIPLVGDLA
Trigger: GGCCAAATCGCCTACCAGAGGAATGACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGGCTGCGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496024.1
CDS CCA 90 bp GCTGCGTCTTCCATGCGATCCGGATCCACCCAGCATGTCCGCAGTTaGGAAGGGGCGGCGGGGCAGAGAGATACGGAGACCTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: AASSMRSGSTQHVRS*EGAAGQRDTETWPG
Trigger: GCCTGGCCAGGTCTCCGTATCTCTCTGCCCCGCCGCCCCTTCCCAACTGCGGACATGCTGGGTGGATCCGGATCGCATGGAAGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS GCA 90 bp CTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTCATTCCTCTGGTAGGCGATTTGGGA +
Preference number: 5 (lower is better)
Translates to: LPQPFLSGSAAPFPG*LLFIIVIPLVGDLG
Trigger: TCCCAAATCGCCTACCAGAGGAATGACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGGCTGCGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS GCA 90 bp CTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTCATTCCTCTGGTAGGCGATTCTTTC +
Preference number: 5 (lower is better)
Translates to: LPQPFLSGSAAPFPG*LLFIIVIPLVGDSF
Trigger: GAAAGAATCGCCTACCAGAGGAATGACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGGCTGCGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000435928.1
ENST00000436461.6
ENST00000454108.5
ENST00000482470.5
CDS GCA 90 bp CTGCCGCAGCCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTCATTCCTCTGGTAGGCGATTTTCAA +
Preference number: 5 (lower is better)
Translates to: LPQPFLSGSAAPFPG*LLFIIVIPLVGDFQ
Trigger: TTGAAAATCGCCTACCAGAGGAATGACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGGCTGCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445569.6
CDS GCA 90 bp GCGTGGGCTGGGCCCGCGGAGGGGCCATGTGATCTGTGGCTGAAATaGACGGTGCAGGATGCTCCCGTGTTCTCCCTTTGTGTTAACACG +
Preference number: 5 (lower is better)
Translates to: AWAGPAEGPCDLWLK*TVQDAPVFSLCVNT
Trigger: CGTGTTAACACAAAGGGAGAACACGGGAGCATCCTGCACCGTGCATTTCAGCCACAGATCACATGGCCCCTCCGCGGGCCCAGCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS TCA 90 bp CGAGCCAGGCGCTCCAGGAATGCGGCCTCATCATCCCCTTCCACTTaGGTGTTTGTGGTGGTTGTCTTGGCCTCCTCGTCAGGCACACTG +
Preference number: 5 (lower is better)
Translates to: RARRSRNAASSSPST*VFVVVVLASSSGTL
Trigger: CAGTGTGCCTGACGAGGAGGCCAAGACAACCACCACAAACACTCAAGTGGAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS TCA 90 bp TCTGTTATTGTTGGGTCGAACTCCTTCTGCCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTTTCCTCACGCCGAGCCAGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SVIVGSNSFCRSRAS*RRFWRLSSRRARRS
Trigger: GGAGCGCCTGGCTCGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCGGCAGAAGGAGTTCGACCCAACAATAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS GCA 90 bp AGCGCCCGCCTTACCTCCTCTCTGAGTTTTCGATCGGCTTCCTCCTaGTTCCTCCTCTGCTCTTCCTCCTCCAGGACCTTCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SARLTSSLSFRSASS*FLLCSSSSRTFLLS
Trigger: GGAGAGAAGGAAGGTCCTGGAGGAGGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCGAAAACTCAGAGAGGAGGTAAGGCGGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472096.1
CDS CCA 90 bp AACAGCCGCACGGCACTAGGGAATTTTCCCGGGCAACGTTCTCAGTaGGCTAGCGCCCGCCTTACCTCCTCTCTGAGTTTTCGATCGGCT +
Preference number: 5 (lower is better)
Translates to: NSRTALGNFPGQRSQ*ASARLTSSLSFRSA
Trigger: AGCCGATCGAAAACTCAGAGAGGAGGTAAGGCGGGCGCTAGCCCACTGAGAACGTTGCCCGGGAAAATTCCCTAGTGCCGTGCGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472096.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCACCTGGGTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: SPRDDDEAPPAFCRLPPGLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...CCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS GCA 90 bp GCGTTTTTGGCGTCTTTCCTCACGCCGAGCCAGGCGCTCCAGGAATaGGGCCTCATCATCCCCTTCCACTTGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: AFLASFLTPSQALQE*GLIIPFHLSVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGATGAGGCCGCATTCCTGGAGCGCCTGGCTCGGCGTGAGGAAAGACGCCAAAAACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS-3UTR CAA 90 bp TTCAGCAGGAACAGGAAGATCCGAGGCTGCCGGCTTTGTAGGTTTTGCGCTTTTAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FSRNRKIRGCRLCRFCAFSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...AAAAGCGCAAAACCTACAAAGCCGGCAGCCTCGGATCTTCCTGTTCCTGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS TCA 90 bp CTCCAGACCGCCCTTCCTTGGCCCCTCCCAGAAGTCCATGCTAAGTaGACACATATCCCCTATGTTTACAGTCGGGAGGCGGTGGTATGC +
Preference number: 5 (lower is better)
Translates to: LQTALPWPLPEVHAK*THIPYVYSREAVVC
Trigger: GCATACCACCGCCTCCCGACTGTAAACATAGGGGATATGTGTTCACTTAGCATGGACTTCTGGGAGGGGCCAAGGAAGGGCGGTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS CCA 90 bp GCTCCAGGAATGCGGCCTCATCATCCCCTTCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCTCGTCAGGCACACTGTTCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: APGMRPHHPLPLECL*WLSWPPRQAHCSGH
Trigger: ATGCCCAGAACAGTGTGCCTGACGAGGAGGCCAAGACAACCACCACAAACACTCAAGTGGAAGGGGATGATGAGGCCGCATTCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS-3UTR CAA 90 bp TCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SNLSGGSDLIHRLLFPEVAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...AACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp TCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: STTELVLRLELGFFLELSSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...AGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp TCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCACCTGGGCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: SPRDDDEAPPAFCRLPPGHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...CCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS TCA 90 bp GGCGGTGGTATGCATTGTCCTGTCGTTTTTCTAATAGGCAGCCAATaGCGACACCCCAGCCAAGGTGGATGCAGCCTGCCTGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: GGGMHCPVVFLIGSQ*RHPSQGGCSLPVEM
Trigger: CATCTCCACAGGCAGGCTGCATCCACCTTGGCTGGGGTGTCGTCATTGGCTGCCTATTAGAAAAACGACAGGACAATGCATACCACCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS GCA 90 bp ACCTCCTCTCTGAGTTTTCGATCGGCTTCCTCCTGCTTCCTCCTCTaGTCTTCCTCCTCCAGGACCTTCCTTCTCTCCTCCCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TSSLSFRSASSCFLL*SSSSRTFLLSSLFF
Trigger: GAAAAAGAGGGAGGAGAGAAGGAAGGTCCTGGAGGAGGAAGAGCAGAGGAGGAAGCAGGAGGAAGCCGATCGAAAACTCAGAGAGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472096.1
CDS CCA 90 bp GCACGGTGCAGGATGCTCCCGTGTTCTCCCTTTGTGTTAACACGTTaGTCTGTCCCTGTGACGAAAGTCTGGGCTTGTCCTCAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: ARCRMLPCSPFVLTR*SVPVTKVWACPQPN
Trigger: ATTTGGCTGAGGACAAGCCCAGACTTTCGTCACAGGGACAGACCAACGTGTTAACACAAAGGGAGAACACGGGAGCATCCTGCACCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393118.6
CDS-3UTR CAA 90 bp CTCTCGGTCTCCCCGCGACGACGACGAAGCTCCTCCAGCCTTTTGCCGGCTTCCCCTGTGGAATTTGATTaGATGATCTTGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: LSVSPRRRRSSSSLLPASPVEFD*MILKCS
Trigger: GGAACATTTCAAGATCATCAAATCAAATTCCACAGG...GGAAGCCGGCAAAAGGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS GCA 90 bp TGCTCTTCTACCTTAGCCTTCTCTTCCTCCTCTGCCCTGGCCCTTTaGCTCTCCTCTGCTGCCCTTTTCTCTTCCTCTTTTATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CSSTLAFSSSSALAL*LSSAALFSSSFILC
Trigger: GCAGAGGATAAAAGAGGAAGAGAAAAGGGCAGCAGAGGAGAGGCAAAGGGCCAGGGCAGAGGAGGAAGAGAAGGCTAAGGTAGAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS GCA 90 bp CTTGTTACGTTTCTGCTCTTCTACCTTAGCCTTCTCTTCCTCCTCTaGCCTGGCCCTTTGCCTCTCCTCTGCTGCCCTTTTCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LVTFLLFYLSLLFLL*PGPLPLLCCPFLFL
Trigger: GAGGAAGAGAAAAGGGCAGCAGAGGAGAGGCAAAGGGCCAGGGCAGAGGAGGAAGAGAAGGCTAAGGTAGAAGAGCAGAAACGTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCECLWW*SWPPRQ
Trigger: CTGACGAGGAGGCCAAGACAACCACCACAAACACTC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: QIAFPRGSACWIRLLVSSECLWW*SWPPRQ
Trigger: CTGACGAGGAGGCCAAGACAACCACCACAAACACTC...ACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS GCA 90 bp TTAGAAACAGGCTCCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LETGSLVGEVTLSTD*FSQRFRLLDTSPGL
Trigger: GAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGAGCCTGTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466704.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: STDCFSQRFRLLDTSPGLSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...GAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTCAGAAGGTTTGGGAGCAGGTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: VPLAGYVSWSQVRRFGSRFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...CCTGCTCCCAAACCTTCTGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCTCAAGTCAGAAGGTTaGGGAGCAGGTGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSLKSEG*GAGDLF
Trigger: AAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCCAGCATGTCCGCAGTaGGGAAGGGGCGGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYPACPQ*GRGGGA
Trigger: TGCCCCGCCGCCCCTTCCCAACTGCGGACATGCTGG...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCCAGCATGTCCGCAGTaGGGAAGGGGCGGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSPACPQ*GRGGGA
Trigger: TGCCCCGCCGCCCCTTCCCAACTGCGGACATGCTGG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS GCA 90 bp TTCTGCTGTGTCATTTTGCATTCTTCTGCTTGGGAGCGACAGACTTaGATCTGTTATTGTTGGGTCGAACTCCTTCTGCCGCTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: FCCVILHSSAWERQT*ICYCWVELLLPLQS
Trigger: GCTCTGGAGCGGCAGAAGGAGTTCGACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTCTCCTTTCTCTTTCTaGGGCAGCTGCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNSPFSF*GSCFFF
Trigger: GAAGAAAAAGCAGCTGCCCAAGAAAGAGAAAGGAGA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGGTAGGCTTGTCTTCTaGGAGCTTTTCTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELGRLVF*ELFSFS
Trigger: GCTAAAAGAGAAAAGCTCCAAGAAGACAAGCCTACC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGCGCCCTCAGCCTCCTaGGTGTCCACGCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSAPSAS*VSTLAL
Trigger: GAGGGCCAGCGTGGACACCAAGGAGGCTGAGGGCGC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VGFELGRDDSINKIHTGLSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGAGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: GGSDLIHRLLFPEVPLAGARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...TCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAGTCAGAAGGTTaGGGAGCAGGTGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCLKSEG*GAGDLF
Trigger: AAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 5 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS CCA 90 bp TCCAAGGGTGGACATTTCAGCCCAGGCACTTTATTTGGAGTAAGATaGCCCGGGCTTAGTACCTCATGCAACCTCACAAACACATTCTCT +
Preference number: 5 (lower is better)
Translates to: SKGGHFSPGTLFGVR*PGLSTSCNLTNTFS
Trigger: AGAGAATGTGTTTGTGAGGTTGCATGAGGTACTAAGCCCGGGCCATCTTACTCCAAATAAAGTGCCTGGGCTGAAATGTCCACCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS-3UTR CAA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTAGCTCCTCCAGCCTTTaGCCGGCTTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSSSSSL*PASTWG
Trigger: CCCCCAGGTGGAAGCCGGCAAAAGGCTGGAGGAGCT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAACCTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: TELVLRLELGFFLELSQTFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...GGTTTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCTCAAGTTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: QIAFPRGSACWIRLLVSSLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...ACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACCTTTGTCATGAGGGTTaGACTTCTGCATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNLCHEG*TSAFFM
Trigger: CATGAAGAATGCAGAAGTCAAACCCTCATGACAAAG...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTGATCAGGAGGAGCTCTaGTTCAAAAGTACAACAAAG +
Preference number: 5 (lower is better)
Translates to: ERISPLQLSSSCVLSLGSDQEEL*FKSTTK
Trigger: CTTTGTTGTACTTTTGAACAAGAGCTCCTCCTGATC...AGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCTAATTCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACAACATGCTAGTCAGCTaGCAGTTTTACCTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNNMLVS*QFYLVK
Trigger: CTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTT...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCCTCTGGTAGGCGATTaGGGAGAGCGCGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSPLVGD*GERGQA
Trigger: AGCCTGGCCGCGCTCTCCCAAATCGCCTACCAGAGG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCCAGACCGCCCTTCCTaGGCCCCTCCCAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSPDRPS*APPRSP
Trigger: TGGACTTCTGGGAGGGGCCAAGGAAGGGCGGTCTGG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS TCA 90 bp TTTTGCCTTCTAAGTTCTCTGCGACGCTCAAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGACCAGATGATGTCTGGACAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: FCLLSSLRRSKSSMV*FQVQGDQMMSGQVS
Trigger: GCTGACCTGTCCAGACATCATCTGGTCTCCCTGAACCTGAAATCACACCATGGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000436461.6
ENST00000445569.6
ENST00000475772.5
ENST00000482470.5
ENST00000489019.6
ENST00000498254.5
CDS TCA 90 bp TTTTGCCTTCTAAGTTCTCTGCGACGCTCAAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGACCAGATGATGTCTGGACCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: FCLLSSLRRSKSSMV*FQVQGDQMMSGPPL
Trigger: CAGAGGAGGTCCAGACATCATCTGGTCTCCCTGAACCTGAAATCACACCATGGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435928.1
CDS GCA 90 bp CCAGGCACTTTATTTGGAGTAAGATGGCCCGGGCTTAGTACCTCATaGAACCTCACAAACACATTCTCTCTGAGCTTGCTTTTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PGTLFGVRWPGLSTS*NLTNTFSLSLLLWS
Trigger: TGACCACAAAAGCAAGCTCAGAGAGAATGTGTTTGTGAGGTTGCATGAGGTACTAAGCCCGGGCCATCTTACTCCAAATAAAGTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CCA 90 bp TTCCACCATCACCTCTACCTGATTTTCTCCAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTCCTCCTTTTCCTTGTCTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: FHHHLYLIFSNAPSL*LLLFLLLLFLVFFL
Trigger: AAGAAAGAAGACAAGGAAAAGGAGGAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGGTAGAGGTGATGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCTCAAGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TTELVLRLELGFFLELSQDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...TTGAGACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443197.5
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCTTCTGCTTCCAACCTaGCCCTCTCTGCCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDLLLPT*PSLPQL
Trigger: GAGCTGAGGCAGAGAGGGCAAGGTTGGAAGCAGAAG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTGGATACCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: GSDLIHRLLFPEVPLAGYQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...GTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AGCCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACGAGACTAACACAATTTaGGTTAAGTCCACTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SPLQLSSSCVLSLGSFWNETNTI*VKSTEV
Trigger: TACCTCAGTGGACTTAACCAAAATTGTGTTAGTCTC...GTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCCTCTGGTAGGCGATTaGGGAGAGCGCGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSPLVGD*GERGQA
Trigger: AGCCTGGCCGCGCTCTCCCAAATCGCCTACCAGAGG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCCTCTGGTAGGCGATTaGGGAGAGCGCGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIPLVGD*GERGQA
Trigger: AGCCTGGCCGCGCTCTCCCAAATCGCCTACCAGAGG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS TCA 90 bp TTTTGCCTTCTAAGTTCTCTGCGACGCTCAAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGACCAGATGATGTCTGGACCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: FCLLSSLRRSKSSMV*FQVQGDQMMSGPWK
Trigger: CTTCCAAGGTCCAGACATCATCTGGTCTCCCTGAACCTGAAATCACACCATGGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454108.5
CDS TCA 90 bp AAATCAGATGCTCACCTTATTTGGTGTGCCTGCTGCAGTGGGGGATaGAAACACATTCCCTTTCTCCCACATACTCTTGATGTTGCGTAC +
Preference number: 5 (lower is better)
Translates to: KSDAHLIWCACCSGG*KHIPFLPHTLDVAY
Trigger: GTACGCAACATCAAGAGTATGTGGGAGAAAGGGAATGTGTTTTCATCCCCCACTGCAGCAGGCACACCAAATAAGGTGAGCATCTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS GCA 90 bp GTCTTGCTCGGCTTTAATTCTTTCTCTTTCTTCTGCTTCCAACCTTaGCCTCTCTGCCTCAGCTCTTTCCTTGTCTTCCTCTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: VLLGFNSFSFFCFQP*PLCLSSFLVFLFHL
Trigger: AAGATGGAAGAGGAAGACAAGGAAAGAGCTGAGGCAGAGAGGGCAAGGTTGGAAGCAGAAGAAAGAGAAAGAATTAAAGCCGAGCAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS GCA 90 bp TGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTTGACACCACTTTTCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: CTGILLQSAVNLGDY*CLMGRFDTTFLHRL
Trigger: AAGTCTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS CCA 90 bp ATGCTAAGTGAACACATATCCCCTATGTTTACAGTCGGGAGGCGGTaGTATGCATTGTCCTGTCGTTTTTCTAATAGGCAGCCAATGACG +
Preference number: 5 (lower is better)
Translates to: MLSEHISPMFTVGRR*YALSCRFSNRQPMT
Trigger: CGTCATTGGCTGCCTATTAGAAAAACGACAGGACAATGCATACCACCGCCTCCCGACTGTAAACATAGGGGATATGTGTTCACTTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGCCTGTGGAATTTGATTaGATGATCTTGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELPVEFD*MILKCS
Trigger: GGAACATTTCAAGATCATCAAATCAAATTCCACAGG...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
CDS-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDECLWW*SWPPRQ
Trigger: CTGACGAGGAGGCCAAGACAACCACCACAAACACTC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTTTTTGAAGGTAGGCTaGTCTTCTTGGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCFLKVG*SSWSFS
Trigger: AGAAAAGCTCCAAGAAGACAAGCCTACCTTCAAAAA...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATCTTGGAGACTATTGCTGCTTGATGGGTCGATTTGACACCACTGCTTTTCTGTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: NLGDYCCLMGRFDTTAFLSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...CAGAAAAGCAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGCTCAAGTCAGAAGGTTaGGGAGCAGGTGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: FVPSIALVYCSSLLSILELKSEG*GAGDLF
Trigger: AAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAG...CTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AATTCTCCATTCTGCGACTTAACTTCTGTAAATCCCTTCTTTCGATCCATGAAGTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: NSPFCDLTSVNPFFRSMKSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...CTTCATGGATCGAAAGAAGGGATTTACAGAAGTTAAGTCGCAGAATGGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGGCCTTAATTCAAACTTaGATCCATTTCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: PSTTELVLRLELGFFLELALIQT*IHFTPM
Trigger: CATTGGAGTGAAATGGATCAAAGTTTGAATTAAGGC...CAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS GCA 90 bp CCTTTCCCTCTCTTCTGCCTCTCTCCTTTCTCTTTCTTGGGCAGCTaGTTTTTCTTCTGCTTCAATTCTTGCTCGTTCATCTGCTATCTT +
Preference number: 5 (lower is better)
Translates to: PFPLFCLSPFSFLGS*FFFCFNSCSFICYL
Trigger: AAGATAGCAGATGAACGAGCAAGAATTGAAGCAGAAGAAAAAGCAGCTGCCCAAGAAAGAGAAAGGAGAGAGGCAGAAGAGAGGGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTTTGTGGTGGTTGTCTaGGCCTCCTCGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLFVVVV*ASSSGT
Trigger: TGTGCCTGACGAGGAGGCCAAGACAACCACCACAAA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDECLWW*SWPPRQ
Trigger: CTGACGAGGAGGCCAAGACAACCACCACAAACACTC...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGACAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCCCAGAGGTTCCGCTaGCTGGATACGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSSQRFR*LDTSPG
Trigger: ACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 5 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAAGTTTGTGGGTCATGAATTCTCCATTCTGCGACTTAACTTCTGTAAATCCCAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSLWVMNSPFCDLTSVNPSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...GGGATTTACAGAAGTTAAGTCGCAGAATGGAGAATTCATGACCCACAAACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CCTCTACAACTGAGCTCGTCCTGCGTCTTGAGCTTGGGTTCTTTCTGGAACTGTGGCATTGAAAACATATaGATACCTATCTGCCATGTT +
Preference number: 5 (lower is better)
Translates to: PLQLSSSCVLSLGSFWNCGIENI*IPICHV
Trigger: AACATGGCAGATAGGTATCAATATGTTTTCAATGCC...ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCTCAGTTGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS GCA 90 bp ACTGGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGACACCACTTTTCTGCACAGACTTATT +
Preference number: 5 (lower is better)
Translates to: TGILLQSAVNLGDYC*LMGRFDTTFLHRLI
Trigger: AATAAGTCTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVLLKAF*ASFLTP
Trigger: CGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAG...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: NQHKYKTERISPLQLSSSSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: NQHKYKTERISPLQLSSSGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGGAGACTATTGCTGCTaGATGGGTCGATTTGACACC +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDGDYCC*MGRFDT
Trigger: GGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TCAAACCTTAGTGGGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SNLSGGSDLIHRLLFPEVFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...AACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTTTGA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000430085.5
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCAGCAGTTTCCTTATTaGGTGTGCCTGCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVQQFPY*VCLLQW
Trigger: CCACTGCAGCAGGCACACCAAATAAGGAAACTGCTG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTCCTGCGTCTTGAGCTaGGGTTCTTTCTGGAACTGT +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGSCVLS*GSFWNC
Trigger: ACAGTTCCAGAAAGAACCCAAGCTCAAGACGCAGGA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS TCA 90 bp GTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTTaGTGGGTCGATTTGACACCACTTTTCTGCACAGACTTATTCAAA +
Preference number: 5 (lower is better)
Translates to: VYCSSLLSILETIAA*WVDLTPLFCTDLFK
Trigger: TTTGAATAAGTCTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS CCA 90 bp ATGATGTCTGGACAGGTCAGCAATCAGATGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAATTTGATTTGATGATCTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: MMSGQVSNQMSEPSG*SPIPVEFDLMILKC
Trigger: ACATTTCAAGATCATCAAATCAAATTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGACATCTGATTGCTGACCTGTCCAGACATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000436461.6
ENST00000445569.6
ENST00000475772.5
ENST00000482470.5
ENST00000489019.6
ENST00000498254.5
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVECLWW*SWPPRQ
Trigger: CTGACGAGGAGGCCAAGACAACCACCACAAACACTC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSECLWW*SWPPRQ
Trigger: CTGACGAGGAGGCCAAGACAACCACCACAAACACTC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: NQHKYKTERISPLQLSSSFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGGTAGGCTTGTCTTCTaGGAGCTTTTCTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVGRLVF*ELFSFS
Trigger: GCTAAAAGAGAAAAGCTCCAAGAAGACAAGCCTACC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: NQHKYKTERISPLQLSSSSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GCGCTTTTTGTTCCCTCAATTGCACTGGTATACTGCTCCAGTCTGCTGTCAATCTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: ALFVPSIALVYCSSLLSILGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...GATTGACAGCAGACTGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAAGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430085.5
CDS-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: GFELGRDDSINKIHTGLQDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATAGCTCGTCCTGCGTCTaGAGCTTGGGTTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSSYRSSGIENILIPICHSSSCV*SLGSFW
Trigger: CCAGAAAGAACCCAAGCTCAAGACGCAGGACGAGCT...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCCTCAACACTGGATTTaGCTCACTTTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVPQHWI*LTLLLC
Trigger: GCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAGACGAAAGTCTGGGCTaGTCCTCAGCCAAATCTACT +
Preference number: 5 (lower is better)
Translates to: GFELGRDDSINKIHTGLQDESLG*SSAKST
Trigger: AGTAGATTTGGCTGAGGACAAGCCCAGACTTTCGTC...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393118.6
CDS CCA 90 bp AACAGTTTGGTGTGCGATATGACCACATTTGGCCTCTCAAAAGGATaGTCTTTGAGGCCTGAAACCAAGGTTGTTAATAAGGGAATACAA +
Preference number: 5 (lower is better)
Translates to: NSLVCDMTTFGLSKG*SLRPETKVVNKGIQ
Trigger: TTGTATTCCCTTATTAACAACCTTGGTTTCAGGCCTCAAAGACCATCCTTTTGAGAGGCCAAATGTGGTCATATCGCACACCAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475772.5
ENST00000498254.5
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAATTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: GFELGRDDSINKIHTGLQLHLLL*GRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAA...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDLGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAATTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: GFELGRDDSINKIHTGLQFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTTGCATTCTTCTGCTaGGGAGCGACAGACTTGCAT +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVFAFFC*GATDLH
Trigger: ATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGGTAGGCTTGTCTTCTaGGAGCTTTTCTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLGRLVF*ELFSFS
Trigger: GCTAAAAGAGAAAAGCTCCAAGAAGACAAGCCTACC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCCTGCTGCTTCTGTTaGAGCTTCTCGAACTCTTCG +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSSCCFC*SFSNSS
Trigger: CGAAGAGTTCGAGAAGCTCAAACAGAAGCAGCAGGA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCTCAAGTCAGAAGGTTaGGGAGCAGGTGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVLKSEG*GAGDLF
Trigger: AAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS TCA 90 bp CAGATGATGTCTGGACCTTGGAAGGCTGACTCATGTTGTCTTTATTaGTTCAAGTCACTAGCATTTTTCACAGGAAGTGAAGACTTCATG +
Preference number: 5 (lower is better)
Translates to: QMMSGPWKADSCCLY*FKSLAFFTGSEDFM
Trigger: CATGAAGTCTTCACTTCCTGTGAAAAATGCTAGTGACTTGAATCAATAAAGACAACATGAGTCAGCCTTCCAAGGTCCAGACATCATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454108.5
CDS-3UTR CAA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LVSLLRYRVMMISRKVSILPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVLPLEC*WWLSWP
Trigger: AGGCCAAGACAACCACCACAAACACTCAAGTGGAAG...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTCTGCTGTGTCATTTaGCATTCTTCTGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQFCCVI*HSSAWE
Trigger: CTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCTTCTGCTTCAATTCTaGCTCGTTCATCTGCTATCT +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGLLLQF*LVHLLS
Trigger: AGATAGCAGATGAACGAGCAAGAATTGAAGCAGAAG...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTGGTAGGCTTGTCTTCTaGGAGCTTTTCTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: VGFELGRDDSINKIHTGLGRLVF*ELFSFS
Trigger: GCTAAAAGAGAAAAGCTCCAAGAAGACAAGCCTACC...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000393118.6
CDS-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTTTTTGAAGGTAGGCTaGTCTTCTTGGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLFLKVG*SSWSFS
Trigger: AGAAAAGCTCCAAGAAGACAAGCCTACCTTCAAAAA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000393118.6
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: NQHKYKTERISPLQLSSSHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCACTTGAATGGTTTCTaGTCATCTGACAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGHLNGF*SSDKPS
Trigger: AGATGGCTTGTCAGATGACAAGAAACCATTCAAGTG...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGCAATCTTGGAGACTATaGCTGCTTGATGGGTCGATT +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQQSWRL*LLDGSI
Trigger: AATCGACCCATCAAGCAGCAATAGTCTCCAAGATTG...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: HIPQAILNLDLLLTSDVVFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...AACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: VGFELGRDDSINKIHTGLLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCAAGTCAGAAGGTTaGGGAGCAGGTGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYLKSEG*GAGDLF
Trigger: AAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAG...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCTCAAGTCAGAAGGTTaGGGAGCAGGTGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLKSEG*GAGDLF
Trigger: AAACAAGTCACCTGCTCCCAAACCTTCTGACTTGAG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: LSSYRSSGIENILIPICHDLIHR*LFPEVP
Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCGTCCAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: NQHKYKTERISPLQLSSSNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...GGACGAGCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: IPQAILNLDLLLTSDVVGNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCCTCAACACTGGATTTaGCTCACTTTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVPQHWI*LTLLLC
Trigger: GCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGAGACTAACACAATTTaGGTTAAGTCCACTGAGGTA +
Preference number: 5 (lower is better)
Translates to: AHIPQAILNLDLLLTSDVETNTI*VKSTEV
Trigger: TACCTCAGTGGACTTAACCAAAATTGTGTTAGTCTC...CACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTCTTTGTCATGAGGGTTaGACTTCTGCATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLLCHEG*TSAFFM
Trigger: CATGAAGAATGCAGAAGTCAAACCCTCATGACAAAG...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GACTTGTGCCTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCGCCTTAATTCAAACTTaGATCCATTTCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: DLCLLCHEGLTSAFFMAFALIQT*IHFTPM
Trigger: CATTGGAGTGAAATGGATCAAAGTTTGAATTAAGGC...GAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAGGCACAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTGATCAGGAGGAGCTCTaGTTCAAAAGTACAACAAAG +
Preference number: 5 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLDQEEL*FKSTTK
Trigger: CTTTGTTGTACTTTTGAACAAGAGCTCCTCCTGATC...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGAGATCAGGAGGAGCTCTaGTTCAAAAGTACAACAAAG +
Preference number: 5 (lower is better)
Translates to: YCTHSAGNFKLGSSVDFRDQEEL*FKSTTK
Trigger: CTTTGTTGTACTTTTGAACAAGAGCTCCTCCTGATC...TCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTAACATGCTAGTCAGCTaGCAGTTTTACCTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLNMLVS*QFYLVK
Trigger: CTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTT...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCTTTGTGTTAACACGTaGGTCTGTCCCTGTGACGAA +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLCVNT*VCPCDE
Trigger: TTCGTCACAGGGACAGACCAACGTGTTAACACAAAG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393118.6
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAGGCGGTGGTATGCATaGTCCTGTCGTTTTTCTAAT +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDRRWYA*SCRFSN
Trigger: ATTAGAAAAACGACAGGACAATGCATACCACCGCCT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCATCATCCCCTTCCACTaGAGTGTTTGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSIIPFH*SVCGGC
Trigger: ACAACCACCACAAACACTCAAGTGGAAGGGGATGAT...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: LVSLLRYRVMMISRKVSILGATD*HLLLLG
Trigger: ACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAA...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCCTCCTGGCTTTCAGTaGTTTTCTCTTCCACCATCA +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSPPGFQ*FSLPPS
Trigger: TGATGGTGGAAGAGAAAACAACTGAAAGCCAGGAGG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp CTACTTTGTCATGAGGGTTTGACTTCTGCATTCTTCATGGCTTTCCTTCCTTTGTTGATCTCTTCTTTTTaGAAGGTAGGCTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLCHEGLTSAFFMAFLPLLISSF*KVGLSS
Trigger: AGAAGACAAGCCTACCTTCAAAAAAGAAGAGATCAA...CAAAGGAAGGAAAGCCATGAAGAATGCAGAAGTCAAACCCTCATGACAAAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000393118.6
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTCCTCCCTCTTTTTCTaGAGTTCCTCCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSSSLFF*SSSSSK
Trigger: TTTGGAGCTGGAGGAACTCAAGAAAAAGAGGGAGGA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATAACTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: GRFTEHASQLAVLPRKDNLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...GTTATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCCACATACTCTTGATGTaGCGTACACCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSHILLM*RTPSAG
Trigger: TCCTGCTGAAGGTGTACGCAACATCAAGAGTATGTG...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TATAAAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: YKIFRNGRFTEHASQLAVLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...AACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSLGAGD*FPSGVL
Trigger: TAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTCCTCAACACTGGATTTaGCTCACTTTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSPQHWI*LTLLLC
Trigger: GCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGG...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TCAGTAGAAAAGTCTCTATTTCACAGCATGGGTTTCTTTAGAAACAGGCTCCTGGAGACTAACACAATTTaGGTTAAGTCCACTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SVEKSLFHSMGFFRNRLLETNTI*VKSTEV
Trigger: TACCTCAGTGGACTTAACCAAAATTGTGTTAGTCTC...CAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AAGTACTGTCATGACTCCTCAACACTGGATTTTGCTCACTTTACTTCTCTGCTTTCCTTTGGCTTAGGTTaGCTAAAGCTAGAAGATTCA +
Preference number: 5 (lower is better)
Translates to: KYCHDSSTLDFAHFTSLLSFGLG*LKLEDS
Trigger: TGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGA...AAGCAGAGAAGTAAAGTGAGCAAAATCCAGTGTTGAGGAGTCATGACAGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTCGTAAAGATTCCTTTGGCTTAGGTTaGCTAAAGCTAGAAGATTCA +
Preference number: 5 (lower is better)
Translates to: NGRFTEHASQLAVLPRKDSFGLG*LKLEDS
Trigger: TGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGA...ATCTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTCCTTTGGCTTAGGTTaGCTAAAGCTAGAAGATTCA +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGSFGLG*LKLEDS
Trigger: TGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCCTTTGTCATGAGGGTTaGACTTCTGCATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVLCHEG*TSAFFM
Trigger: CATGAAGAATGCAGAAGTCAAACCCTCATGACAAAG...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTCAAGATCAGGAGGAGCTCTaGTTCAAAAGTACAACAAAG +
Preference number: 5 (lower is better)
Translates to: GFELGRDDSINKIHTGLQDQEEL*FKSTTK
Trigger: CTTTGTTGTACTTTTGAACAAGAGCTCCTCCTGATC...TTGAAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTCCTGTGGAATTTGATTaGATGATCTTGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGPVEFD*MILKCS
Trigger: GGAACATTTCAAGATCATCAAATCAAATTCCACAGG...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR CAA 90 bp TGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTCCTGTGGAATTTGATTaGATGATCTTGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: CTHSAGNFKLGSSVDFRCPVEFD*MILKCS
Trigger: GGAACATTTCAAGATCATCAAATCAAATTCCACAGG...ACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVDLHLL*LGRTPS
Trigger: AGAAGGAGTTCGACCCAACAATAACAGATGCAAGTC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGCTATCTTTTTGTCTaGCTCGGCTTTAATTCTTTC +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGCYLFV*LGFNSF
Trigger: GAAAGAATTAAAGCCGAGCAAGACAAAAAGATAGCA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACTTCTCTTCTAGCTGCTaGTTACGTTTCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYFSSSC*LRFCSS
Trigger: AGAAGAGCAGAAACGTAACAAGCAGCTAGAAGAGAA...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTTTTCCCCTTTTATCTTaGTCTCTTGCATGGCATGTT +
Preference number: 5 (lower is better)
Translates to: VGFELGRDDSINKIHTGLFPLLS*SLAWHV
Trigger: AACATGCCATGCAAGAGACAAAGATAAAAGGGGAAA...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATTTTTTGAAGGTAGGCTaGTCTTCTTGGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDFLKVG*SSWSFS
Trigger: AGAAAAGCTCCAAGAAGACAAGCCTACCTTCAAAAA...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp ACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTTGATCTCTTCTTTTTaGAAGGTAGGCTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: THSAGNFKLGSSVDFRCGLISSF*KVGLSS
Trigger: AGAAGACAAGCCTACCTTCAAAAAAGAAGAGATCAA...ACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAATTCAAACTTTGATCCATTTCACTCCAATGACGGGAGTCAATGCTACCTGGTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LIQTLIHFTPMTGVNATWLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...CCAGGTAGCATTGACTCCCGTCATTGGAGTGAAATGGATCAAAGTTTGAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp CTTTCTTCTTATAGGTCATCAGGCATTGAAAACATATTGATACCTATCTGCCATGCTCGCTCTTCTATCTaGAGAGATGAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: LSSYRSSGIENILIPICHARSSI*RDEPLG
Trigger: TCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGC...ATGGCAGATAGGTATCAATATGTTTTCAATGCCTGATGACCTATAAGAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGTTCTCCCACATACTCTaGATGTTGCGTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVFSHIL*MLRTPS
Trigger: TGAAGGTGTACGCAACATCAAGAGTATGTGGGAGAA...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTAGTTAGCCATTCATaGATGCGGCTAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSLVSHS*MRLETP
Trigger: AGGGGTTTCTAGCCGCATCAATGAATGGCTAACTAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTAACTTGGATCTTCTGTaGACTTCAGATGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSNLDLL*TSDVVG
Trigger: ACCAACCACATCTGAAGTCAACAGAAGATCCAAGTT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGTCCTTTGGCTTAGGTTaGCTAAAGCTAGAAGATTCA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLSFGLG*LKLEDS
Trigger: TGAATCTTCTAGCTTTAGCAAACCTAAGCCAAAGGA...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACCTTTGTCATGAGGGTTaGACTTCTGCATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYLCHEG*TSAFFM
Trigger: CATGAAGAATGCAGAAGTCAAACCCTCATGACAAAG...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGACTTCAGATGCCTTAATTCAAACTTaGATCCATTTCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: TAHIPQAILNLDLLLTSDALIQT*IHFTPM
Trigger: CATTGGAGTGAAATGGATCAAAGTTTGAATTAAGGC...ATCTGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTAACATGCTAGTCAGCTaGCAGTTTTACCTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSNMLVS*QFYLVK
Trigger: CTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTT...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACAACATGCTAGTCAGCTaGCAGTTTTACCTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYNMLVS*QFYLVK
Trigger: CTTTACGAGGTAAAACTGCAAGCTGACTAGCATGTT...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS TCA 90 bp GATTTTCCAATTGTAAATTGGGTTGACATTAGTGTATACCTCCTGTaGGCCTTTATGCAAAGAATCTCGGGGTGTAGATTAATTAAACGG +
Preference number: 5 (lower is better)
Translates to: DFPIVNWVDISVYLL*AFMQRISGCRLIKR
Trigger: CCGTTTAATTAATCTACACCCCGAGATTCTTTGCATAAAGGCTCACAGGAGGTATACACTAATGTCAACCCAATTTACAATTGGAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCCTGTGGAATTTGATTaGATGATCTTGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDPVEFD*MILKCS
Trigger: GGAACATTTCAAGATCATCAAATCAAATTCCACAGG...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000422748.5
CDS-3UTR CAA 90 bp ATTTTAAACTTGGATCTTCTGTTGACTTCAGATGTGGTTGGTATCACTGCTCAGTCATCTGCTATCTTTTaGTCTTGCTCGGCTTTAATT +
Preference number: 5 (lower is better)
Translates to: ILNLDLLLTSDVVGITAQSSAIF*SCSALI
Trigger: AATTAAAGCCGAGCAAGACAAAAAGATAGCAGATGA...CTGAGCAGTGATACCAACCACATCTGAAGTCAACAGAAGATCCAAGTTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS-3UTR CAA 90 bp AAATTTTTAGGAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTTACTTTTTGAAGGTAGGCTaGTCTTCTTGGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KFLGMADSQNMLVSLQFYFLKVG*SSWSFS
Trigger: AGAAAAGCTCCAAGAAGACAAGCCTACCTTCAAAAA...GTAAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTCCTAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361675.7
ENST00000393118.6
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTTTTGTTCCCTCAATaGCACTGGTATACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSFLFPQ*HWYTAP
Trigger: TGGAGCAGTATACCAGTGCAATTGAGGGAACAAAAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CGGTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: RFIFLDTAHIPQAILNLDQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...ATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAACCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTCTGTTGCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: FLDTAHIPQAILNLDLLLQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...CAACAGAAGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp GTAGGCTTTGAGCTTGGTCGAGATGATAGCATTAATAAAATTCACACTGGACTTGGCATTGAAAACATATaGATACCTATCTGCCATGTT +
Preference number: 5 (lower is better)
Translates to: VGFELGRDDSINKIHTGLGIENI*IPICHV
Trigger: AACATGGCAGATAGGTATCAATATGTTTTCAATGCC...AAGTCCAGTGTGAATTTTATTAATGCTATCATCTCGACCAAGCTCAAAGCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp ATGTGGTTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCGCCTTAATTCAAACTTaGATCCATTTCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: MWLVSLLRYRVMMISRKVALIQT*IHFTPM
Trigger: CATTGGAGTGAAATGGATCAAAGTTTGAATTAAGGC...GACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS GCA 90 bp CAAAGAATCTCGGGGTGTAGATTAATTAAACGGTTCAAGGAGTTGTaGCCAAGAAGGATTTGTGAACATTTCCATTTCTTCCTTTTTAAA +
Preference number: 5 (lower is better)
Translates to: QRISGCRLIKRFKEL*PRRICEHFHFFLFK
Trigger: TTTAAAAAGGAAGAAATGGAAATGTTCACAAATCCTTCTTGGGCACAACTCCTTGAACCGTTTAATTAATCTACACCCCGAGATTCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS-3UTR CAA 90 bp GTTCATTTTTCTAGATACTGCACACATTCCGCAGGCAATTTTAAACTTGGATCTTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: VHFSRYCTHSAGNFKLGSLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...AGATCCAAGTTTAAAATTGCCTGCGGAATGTGTGCAGTATCTAGAAAAATGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000466704.1
ENST00000495522.1
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCGAGACTAACACAATTTaGGTTAAGTCCACTGAGGTA +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSETNTI*VKSTEV
Trigger: TACCTCAGTGGACTTAACCAAAATTGTGTTAGTCTC...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTGATCTCTTCTTTTTaGAAGGTAGGCTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSLISSF*KVGLSS
Trigger: AGAAGACAAGCCTACCTTCAAAAAAGAAGAGATCAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000393118.6
ENST00000422748.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS-3UTR CAA 90 bp TTAGTAAATCAACATAAATACAAAACAGAGCGAATTAGCCCTCTACAACTGAGCTTAGGAGTGAAACACTaGAATGGTTTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LVNQHKYKTERISPLQLSLGVKH*NGFLSS
Trigger: AGATGACAAGAAACCATTCAAGTGTTTCACTCCTAA...GCTCAGTTGTAGAGGGCTAATTCGCTCTGTTTTGTATTTATGTTGATTTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp TTGGTATCACTGCTCAGATACAGAGTTATGATGATCAGTAGAAAAGTCTCTATTCAGGCAATTTTAAACTaGGATCTTCTGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: LVSLLRYRVMMISRKVSIQAILN*DLLLTS
Trigger: TGAAGTCAACAGAAGATCCAAGTTTAAAATTGCCTG...AATAGAGACTTTTCTACTGATCATCATAACTCTGTATCTGAGCAGTGATACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000422748.5
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS-3UTR CAA 90 bp CTACCTGGGACACTTGTATTTGTAAATTCTGATTTAGCTTATTGTAGACTTGTGGGCATTGAAAACATATaGATACCTATCTGCCATGTT +
Preference number: 5 (lower is better)
Translates to: LPGTLVFVNSDLAYCRLVGIENI*IPICHV
Trigger: AACATGGCAGATAGGTATCAATATGTTTTCAATGCC...CACAAGTCTACAATAAGCTAAATCAGAATTTACAAATACAAGTGTCCCAGGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000443197.5
CDS TCA 72 bp GGTCAGGGCGTGGGCTGGGCCCGCGGAGGGGCCATGTaGTCTGTGGCTGAAATGCACGGTGCAGGATGCTCC +
Preference number: 6 (lower is better)
Translates to: GQGVGWARGGAM*SVAEMHGAGCS
Trigger: GGAGCATCCTGCACCGTGCATTTCAGCCACAGATCACATGGCCCCTCCGCGGGCCCAGCCCACGCCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS TCA 72 bp GGGCTGGGCCCGCGGAGGGGCCATGTGATCTGTGGCTaGAATGCACGGTGCAGGATGCTCCCGTGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: GLGPRRGHVICG*NARCRMLPCSP
Trigger: GGGAGAACACGGGAGCATCCTGCACCGTGCATTTCAGCCACAGATCACATGGCCCCTCCGCGGGCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS GCA 72 bp CCGTTCCTGTCGGGCTCGGCGGCGCCGTTCCCGGGCTaGCTCCTCTTCATCATCGTCATTCCTCTGGTAGGC +
Preference number: 6 (lower is better)
Translates to: PFLSGSAAPFPG*LLFIIVIPLVG
Trigger: GCCTACCAGAGGAATGACGATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCCCGACAGGAACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000430085.5
ENST00000435928.1
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000454108.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CCA 72 bp GCGTGGGCTGGGCCCGCGGAGGGGCCATGTGATCTGTaGCTGAAATGCACGGTGCAGGATGCTCCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: AWAGPAEGPCDL*LKCTVQDAPVF
Trigger: GAACACGGGAGCATCCTGCACCGTGCATTTCAGCCACAGATCACATGGCCCCTCCGCGGGCCCAGCCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS GCA 72 bp GCGATTTGGGAGAGCGCGGCCAGGCTGCGTCTTCCATaGGATCCGGATCCACCCAGCATGTCCGCAGTTGGG +
Preference number: 6 (lower is better)
Translates to: AIWESAARLRLP*DPDPPSMSAVG
Trigger: CCCAACTGCGGACATGCTGGGTGGATCCGGATCGCATGGAAGACGCAGCCTGGCCGCGCTCTCCCAAATCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS CCA 72 bp TCCATGCGATCCGGATCCACCCAGCATGTCCGCAGTTaGGAAGGGGCGGCGGGGCAGAGAGATACGGAGACC +
Preference number: 6 (lower is better)
Translates to: SMRSGSTQHVRS*EGAAGQRDTET
Trigger: GGTCTCCGTATCTCTCTGCCCCGCCGCCCCTTCCCAACTGCGGACATGCTGGGTGGATCCGGATCGCATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS CAA 72 bp CTCCTTCTGCCGCTCCAGAGCCTCCTGAAGGCGTTTTaGGCGTCTTTCCTCACGCCGAGCCAGGCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLLPLQSLLKAF*ASFLTPSQALQ
Trigger: CTGGAGCGCCTGGCTCGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCGGCAGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS GCA 72 bp GGGCCCGCGGAGGGGCCATGTGATCTGTGGCTGAAATaGACGGTGCAGGATGCTCCCGTGTTCTCCCTTTGT +
Preference number: 6 (lower is better)
Translates to: GPAEGPCDLWLK*TVQDAPVFSLC
Trigger: ACAAAGGGAGAACACGGGAGCATCCTGCACCGTGCATTTCAGCCACAGATCACATGGCCCCTCCGCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393118.6
ENST00000443197.5
CDS GCA 72 bp TCCTCTGGTAGGCGATTTGGGAGAGCGCGGCCAGGCTaGGTCTTCCATGCGATCCGGATCCACCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: SSGRRFGRARPG*VFHAIRIHPAC
Trigger: ACATGCTGGGTGGATCCGGATCGCATGGAAGACGCAGCCTGGCCGCGCTCTCCCAAATCGCCTACCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393118.6
ENST00000424922.5
ENST00000443197.5
ENST00000495522.1
CDS TCA 72 bp GTTGGGTCGAACTCCTTCTGCCGCTCCAGAGCCTCCTaGAGGCGTTTTTGGCGTCTTTCCTCACGCCGAGCC +
Preference number: 6 (lower is better)
Translates to: VGSNSFCRSRAS*RRFWRLSSRRA
Trigger: GGCTCGGCGTGAGGAAAGACGCCAAAAACGCCTTCAGGAGGCTCTGGAGCGGCAGAAGGAGTTCGACCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CAA 90 bp GGCGCTCCAGGAATGCGGCCTCATCATCCCCTTCCACTTGAGTGTTaGTGGTGGTTGTCTTGGCCTCCTCGTCAGGCACACTGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: GAPGMRPHHPLPLEC*WWLSWPPRQAHCSG
Trigger: CCCAGAACAGTGTGCCTGACGAGGAGGCCAAGACAACCACCACAAACACTCAAGTGGAAGGGGATGATGAGGCCGCATTCCTGGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS TCA 72 bp GTTCTCAGTGGGCTAGCGCCCGCCTTACCTCCTCTCTaGGTTTTCGATCGGCTTCCTCCTGCTTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: VLSGLAPALPPL*VFDRLPPASSS
Trigger: AGAGGAGGAAGCAGGAGGAAGCCGATCGAAAACTCAGAGAGGAGGTAAGGCGGGCGCTAGCCCACTGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472096.1
CDS CCA 72 bp TCGTCAGGCACACTGTTCTGGGCATTCACCTCCACCTaGTCGGTCACCTGTCCCAAGGATTCTTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSGTLFWAFTST*SVTCPKDSSSC
Trigger: GCAGGAGGAAGAATCCTTGGGACAGGTGACCGACCAGGTGGAGGTGAATGCCCAGAACAGTGTGCCTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CCA 72 bp ACGGCACTAGGGAATTTTCCCGGGCAACGTTCTCAGTaGGCTAGCGCCCGCCTTACCTCCTCTCTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: TALGNFPGQRSQ*ASARLTSSLSF
Trigger: AAAACTCAGAGAGGAGGTAAGGCGGGCGCTAGCCCACTGAGAACGTTGCCCGGGAAAATTCCCTAGTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472096.1
CDS CAA 90 bp GGAATGCGGCCTCATCATCCCCTTCCACTTGAGTGTTTGTGGTGGTaGTCTTGGCCTCCTCGTCAGGCACACTGTTCTGGGCATTCACCT +
Preference number: 6 (lower is better)
Translates to: GMRPHHPLPLECLWW*SWPPRQAHCSGHSP
Trigger: AGGTGAATGCCCAGAACAGTGTGCCTGACGAGGAGGCCAAGACAACCACCACAAACACTCAAGTGGAAGGGGATGATGAGGCCGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS TCA 72 bp GCCCTTCCTTGGCCCCTCCCAGAAGTCCATGCTAAGTaGACACATATCCCCTATGTTTACAGTCGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: ALPWPLPEVHAK*THIPYVYSREA
Trigger: CGCCTCCCGACTGTAAACATAGGGGATATGTGTTCACTTAGCATGGACTTCTGGGAGGGGCCAAGGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS CCA 72 bp ATGCGGCCTCATCATCCCCTTCCACTTGAGTGTTTGTaGTGGTTGTCTTGGCCTCCTCGTCAGGCACACTGT +
Preference number: 6 (lower is better)
Translates to: MRPHHPLPLECL*WLSWPPRQAHC
Trigger: ACAGTGTGCCTGACGAGGAGGCCAAGACAACCACCACAAACACTCAAGTGGAAGGGGATGATGAGGCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000445569.6
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CCA 72 bp TCTGCTTGGGAGCGACAGACTTGCATCTGTTATTGTTaGGTCGAACTCCTTCTGCCGCTCCAGAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SAWERQTCICYC*VELLLPLQSLL
Trigger: CAGGAGGCTCTGGAGCGGCAGAAGGAGTTCGACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CAA 90 bp TGCACGGTGCAGGATGCTCCCGTGTTCTCCCTTTGTGTTAACACGTaGGTCTGTCCCTGTGACGAAAGTCTGGGCTTGTCCTCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: CTVQDAPVFSLCVNT*VCPCDESLGLSSAK
Trigger: TTTGGCTGAGGACAAGCCCAGACTTTCGTCACAGGGACAGACCAACGTGTTAACACAAAGGGAGAACACGGGAGCATCCTGCACCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393118.6
CDS CAA 72 bp TTCTGCTTGGGAGCGACAGACTTGCATCTGTTATTGTaGGGTCGAACTCCTTCTGCCGCTCCAGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: FCLGATDLHLLL*GRTPSAAPEPP
Trigger: AGGAGGCTCTGGAGCGGCAGAAGGAGTTCGACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS TCA 72 bp ATGCATTGTCCTGTCGTTTTTCTAATAGGCAGCCAATaGCGACACCCCAGCCAAGGTGGATGCAGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: MHCPVVFLIGSQ*RHPSQGGCSLP
Trigger: AGGCAGGCTGCATCCACCTTGGCTGGGGTGTCGTCATTGGCTGCCTATTAGAAAAACGACAGGACAATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS GCA 72 bp GGCTCCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCT +
Preference number: 6 (lower is better)
Translates to: GSLVGEVTLSTD*FSQRFRLLDTS
Trigger: AGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466704.1
CDS CAA 72 bp TTCTTCTGCTTGGGAGCGACAGACTTGCATCTGTTATaGTTGGGTCGAACTCCTTCTGCCGCTCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: FFCLGATDLHLL*LGRTPSAAPEP
Trigger: AGGCTCTGGAGCGGCAGAAGGAGTTCGACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAAGCAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CAA 72 bp AGGCTCCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTC +
Preference number: 6 (lower is better)
Translates to: RLLSGGSDLIHR*LFPEVPLAGYV
Trigger: GACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466704.1
CDS CCA 72 bp CACCTCTACCTGATTTTCTCCAATGCTCCCTCGCTTTaGCTTCTCCTCTTCCTCCTCCTCCTTTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: HLYLIFSNAPSL*LLLFLLLLFLV
Trigger: GACAAGGAAAAGGAGGAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGGTAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS CAA 90 bp TTTAGAAACAGGCTCCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: FRNRLLSGGSDLIHR*LFPEVPLAGYVSWS
Trigger: AGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGAGCCTGTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466704.1
CDS TCA 72 bp CCAGATGATGTCTGGACAGGTCAGCAATCAGATGTCTaGGCCTTCTGGTTGGTCACCAATCCCTGTGGAATT +
Preference number: 6 (lower is better)
Translates to: PDDVWTGQQSDV*AFWLVTNPCGI
Trigger: AATTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGACATCTGATTGCTGACCTGTCCAGACATCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000436461.6
ENST00000445569.6
ENST00000475772.5
ENST00000482470.5
ENST00000489019.6
ENST00000498254.5
CDS GCA 72 bp CCTTTTCTCTTCCTCCCTCATCCTTTCCCTCTCTTCTaGCTCTCTCCTTTCTCTTTCTTGGGCAGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: PFLFLPHPFPLF*LSPFSFLGSCF
Trigger: AAAGCAGCTGCCCAAGAAAGAGAAAGGAGAGAGGCAGAAGAGAGGGAAAGGATGAGGGAGGAAGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS GCA 72 bp TCTTTAAATGAGGAGCCCGTTTCCCCTGCGTTTCTGTaGCATGGAGTCAAGTATTCCAGAATTCCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SLNEEPVSPAFL*HGVKYSRIPLQ
Trigger: CTGCAGGGGAATTCTGGAATACTTGACTCCATGGCACAGAAACGCAGGGGAAACGGGCTCCTCATTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435928.1
CDS CCA 72 bp GGACATTTCAGCCCAGGCACTTTATTTGGAGTAAGATaGCCCGGGCTTAGTACCTCATGCAACCTCACAAAC +
Preference number: 6 (lower is better)
Translates to: GHFSPGTLFGVR*PGLSTSCNLTN
Trigger: GTTTGTGAGGTTGCATGAGGTACTAAGCCCGGGCCATCTTACTCCAAATAAAGTGCCTGGGCTGAAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 72 bp TCCCCTATGTTTACAGTCGGGAGGCGGTGGTATGCATaGTCCTGTCGTTTTTCTAATAGGCAGCCAATGACG +
Preference number: 6 (lower is better)
Translates to: SPMFTVGRRWYA*SCRFSNRQPMT
Trigger: CGTCATTGGCTGCCTATTAGAAAAACGACAGGACAATGCATACCACCGCCTCCCGACTGTAAACATAGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS CAA 72 bp GATTACCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTC +
Preference number: 6 (lower is better)
Translates to: DYLSGGSDLIHR*LFPEVPLAGYV
Trigger: GACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473714.1
CDS CAA 90 bp TTTCTGCTGTGTCATTTTGCATTCTTCTGCTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGTCGAACTCCTTCTGCCGCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: FLLCHFAFFCLGATD*HLLLLGRTPSAAPE
Trigger: CTCTGGAGCGGCAGAAGGAGTTCGACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATGACACAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CAA 90 bp CTTCCACCATCACCTCTACCTGATTTTCTCCAATGCTCCCTCGCTTaGGCTTCTCCTCTTCCTCCTCCTCCTTTTCCTTGTCTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LPPSPLPDFLQCSLA*ASPLPPPPFPCLLS
Trigger: AGAAAGAAGACAAGGAAAAGGAGGAGGAGGAAGAGGAGAAGCCAAAGCGAGGGAGCATTGGAGAAAATCAGGTAGAGGTGATGGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS CAA 90 bp TTCCCAATAGATTACCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCTCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: FPIDYLSGGSDLIHR*LFPEVPLAGYVSWS
Trigger: AGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTAATCTATTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473714.1
CDS GCA 72 bp CTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTaGTTGATGGGTCGATTTGACACCACTTTTCTGCAC +
Preference number: 6 (lower is better)
Translates to: LLQSAVNLGDYC*LMGRFDTTFLH
Trigger: GTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS GCA 72 bp ACACTTTCTGCTTCGAGTCGCATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGACGCTCAAAATCATCC +
Preference number: 6 (lower is better)
Translates to: TLSASSRISSLF*LLSSLRRSKSS
Trigger: GGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGATGCGACTCGAAGCAGAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445569.6
CDS GCA 72 bp CCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTaGTGGATACGTCTCCTGGTCTCAAGTCCTGATAAA +
Preference number: 6 (lower is better)
Translates to: PYPQIAFPRGSA*WIRLLVSSPDK
Trigger: TTTATCAGGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480638.1
CDS GCA 72 bp TACCTTTCTGCTTCGAGTCGCATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGACGCTCAAAATCATCC +
Preference number: 6 (lower is better)
Translates to: YLSASSRISSLF*LLSSLRRSKSS
Trigger: GGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGATGCGACTCGAAGCAGAAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475772.5
ENST00000498254.5
CDS GCA 72 bp ATTACCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCTGGATACGTCT +
Preference number: 6 (lower is better)
Translates to: ITLVGEVTLSTD*FSQRFRLLDTS
Trigger: AGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473714.1
CDS GCA 72 bp TCTCTTTCTGCTTCGAGTCGCATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGACGCTCAAAATCATCC +
Preference number: 6 (lower is better)
Translates to: SLSASSRISSLF*LLSSLRRSKSS
Trigger: GGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGATGCGACTCGAAGCAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489019.6
CDS TCA 72 bp CTAAGTTCTCTGCGACGCTCAAAATCATCCATGGTGTaGTTTCAGGTTCAGGGAGACCAGATGATGTCTGGA +
Preference number: 6 (lower is better)
Translates to: LSSLRRSKSSMV*FQVQGDQMMSG
Trigger: TCCAGACATCATCTGGTCTCCCTGAACCTGAAATCACACCATGGATGATTTTGAGCGTCGCAGAGAACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000435928.1
ENST00000436461.6
ENST00000445569.6
ENST00000454108.5
ENST00000475772.5
ENST00000482470.5
ENST00000489019.6
ENST00000498254.5
CDS TCA 72 bp TCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTTaGTGGGTCGATTTGACACCACTTTTCTGCACAGAC +
Preference number: 6 (lower is better)
Translates to: SSLLSILETIAA*WVDLTPLFCTD
Trigger: GTCTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS GCA 72 bp ATTCTTTCTGCTTCGAGTCGCATCTCCTCCCTCTTTTaGCTTCTAAGTTCTCTGCGACGCTCAAAATCATCC +
Preference number: 6 (lower is better)
Translates to: ILSASSRISSLF*LLSSLRRSKSS
Trigger: GGATGATTTTGAGCGTCGCAGAGAACTTAGAAGGCAAAAGAGGGAGGAGATGCGACTCGAAGCAGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000435928.1
ENST00000436461.6
ENST00000454108.5
ENST00000482470.5
CDS CCA 72 bp GGACAGGTCAGCAATCAGATGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAATTTGATTTGATGATC +
Preference number: 6 (lower is better)
Translates to: GQVSNQMSEPSG*SPIPVEFDLMI
Trigger: GATCATCAAATCAAATTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGACATCTGATTGCTGACCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000417172.5
ENST00000422748.5
ENST00000430085.5
ENST00000436461.6
ENST00000445569.6
ENST00000475772.5
ENST00000482470.5
ENST00000489019.6
ENST00000498254.5
CDS CCA 72 bp GAACACATATCCCCTATGTTTACAGTCGGGAGGCGGTaGTATGCATTGTCCTGTCGTTTTTCTAATAGGCAG +
Preference number: 6 (lower is better)
Translates to: EHISPMFTVGRR*YALSCRFSNRQ
Trigger: CTGCCTATTAGAAAAACGACAGGACAATGCATACCACCGCCTCCCGACTGTAAACATAGGGGATATGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422748.5
CDS CCA 72 bp TATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCTaGATACGTCTCCTGGTCTCAAGTCCTGATAAAAAG +
Preference number: 6 (lower is better)
Translates to: YPQIAFPRGSAC*IRLLVSSPDKK
Trigger: CTTTTTATCAGGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480638.1
CDS CAA 72 bp TGTCATTTTGCATTCTTCTGCTTGGGAGCGACAGACTaGCATCTGTTATTGTTGGGTCGAACTCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: CHFAFFCLGATD*HLLLLGRTPSA
Trigger: GGCAGAAGGAGTTCGACCCAACAATAACAGATGCAAGTCTGTCGCTCCCAAGCAGAAGAATGCAAAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361675.7
ENST00000361901.6
ENST00000393118.6
ENST00000417172.5
ENST00000422748.5
ENST00000424922.5
ENST00000436461.6
ENST00000443197.5
ENST00000482470.5
ENST00000495522.1
ENST00000496024.1
CDS CAA 72 bp CTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTaGATGGGTCGATTTGACACCACTTTTCTGCACAGA +
Preference number: 6 (lower is better)
Translates to: LQSAVNLGDYCC*MGRFDTTFLHR
Trigger: TCTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS GCA 72 bp ATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTaGTGCTTGATGGGTCGATTTGACACCACTTTTCTG +
Preference number: 6 (lower is better)
Translates to: ILLQSAVNLGDY*CLMGRFDTTFL
Trigger: CAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS GCA 72 bp TTATTTGGAGTAAGATGGCCCGGGCTTAGTACCTCATaGAACCTCACAAACACATTCTCTCTGAGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: LFGVRWPGLSTS*NLTNTFSLSLL
Trigger: AAGCAAGCTCAGAGAGAATGTGTTTGTGAGGTTGCATGAGGTACTAAGCCCGGGCCATCTTACTCCAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CCA 72 bp AGGAAGGTCAGCAATCAGATGTCTGAGCCTTCTGGTTaGTCACCAATCCCTGTGGAATTTGATTTGATGATC +
Preference number: 6 (lower is better)
Translates to: RKVSNQMSEPSG*SPIPVEFDLMI
Trigger: GATCATCAAATCAAATTCCACAGGGATTGGTGACCAACCAGAAGGCTCAGACATCTGATTGCTGACCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454108.5
CDS CAA 90 bp GGTATACTGCTCCAGTCTGCTGTCAATCTTGGAGACTATTGCTGCTaGATGGGTCGATTTGACACCACTTTTCTGCACAGACTTATTCAA +
Preference number: 6 (lower is better)
Translates to: GILLQSAVNLGDYCC*MGRFDTTFLHRLIQ
Trigger: TTGAATAAGTCTGTGCAGAAAAGTGGTGTCAAATCGACCCATCAAGCAGCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422748.5
ENST00000495522.1
CDS CCA 72 bp GTGTGCGATATGACCACATTTGGCCTCTCAAAAGGATaGTCTTTGAGGCCTGAAACCAAGGTTGTTAATAAG +
Preference number: 6 (lower is better)
Translates to: VCDMTTFGLSKG*SLRPETKVVNK
Trigger: CTTATTAACAACCTTGGTTTCAGGCCTCAAAGACCATCCTTTTGAGAGGCCAAATGTGGTCATATCGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475772.5
ENST00000498254.5
CDS TCA 72 bp TCTACTCCTTATGTTACCAGAGATGCTTGGAAAACTTaGGGCACTAAAGAGCACATAACTTTTGGGTCCGGT +
Preference number: 6 (lower is better)
Translates to: STPYVTRDAWKT*GTKEHITFGSG
Trigger: ACCGGACCCAAAAGTTATGTGCTCTTTAGTGCCTCAAGTTTTCCAAGCATCTCTGGTAACATAAGGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 72 bp CTAAAGGTACTTACAGAAGGTTTGGGAGCAGGTGACTaGTTTCCATCTGGGGTTTTAGTTAGCCATTCATTG +
Preference number: 6 (lower is better)
Translates to: LKVLTEGLGAGD*FPSGVLVSHSL
Trigger: CAATGAATGGCTAACTAAAACCCCAGATGGAAACAAGTCACCTGCTCCCAAACCTTCTGTAAGTACCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 90 bp AATTTCTGCATTCCACTGTCTGTCCACTTTCATATAAGAAGTCATTaGAGAGAAGGCAGTGTTGGTCGATGGAGATTTCAGGCTGGTAAC +
Preference number: 6 (lower is better)
Translates to: NFCIPLSVHFHIRSH*REGSVGRWRFQAGN
Trigger: GTTACCAGCCTGAAATCTCCATCGACCAACACTGCCTTCTCTCAAATGACTTCTTATATGAAAGTGGACAGACAGTGGAATGCAGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496024.1
CDS TCA 72 bp CTGGTAGGCGATTTTCAAAAGATACAGCATGTTGCATaGGTTATTTGTGTAGACACTTTCTGCTTCGAGTCG +
Preference number: 6 (lower is better)
Translates to: LVGDFQKIQHVA*VICVDTFCFES
Trigger: CGACTCGAAGCAGAAAGTGTCTACACAAATAACTCATGCAACATGCTGTATCTTTTGAAAATCGCCTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445569.6
CDS CAA 72 bp GATATGACCACATTTGGCCTCTCAAAAGGATGGTCTTaGAGGCCTGAAACCAAGGTTGTTAATAAGGGAATA +
Preference number: 6 (lower is better)
Translates to: DMTTFGLSKGWS*RPETKVVNKGI
Trigger: TATTCCCTTATTAACAACCTTGGTTTCAGGCCTCAAAGACCATCCTTTTGAGAGGCCAAATGTGGTCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475772.5
ENST00000498254.5
CDS CAA 90 bp TTGGTGTGCGATATGACCACATTTGGCCTCTCAAAAGGATGGTCTTaGAGGCCTGAAACCAAGGTTGTTAATAAGGGAATACAAGTATTT +
Preference number: 6 (lower is better)
Translates to: LVCDMTTFGLSKGWS*RPETKVVNKGIQVF
Trigger: AAATACTTGTATTCCCTTATTAACAACCTTGGTTTCAGGCCTCAAAGACCATCCTTTTGAGAGGCCAAATGTGGTCATATCGCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475772.5
ENST00000498254.5
CDS GCA 72 bp TCGGGGTGTAGATTAATTAAACGGTTCAAGGAGTTGTaGCCAAGAAGGATTTGTGAACATTTCCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: SGCRLIKRFKEL*PRRICEHFHFF
Trigger: GAAGAAATGGAAATGTTCACAAATCCTTCTTGGGCACAACTCCTTGAACCGTTTAATTAATCTACACCCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 72 bp TGGTCACCAATCCCTGTGGAATTTGATTTGATGATCTaGAAATGTTCCAATGATACCTGCATTTCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: WSPIPVEFDLMI*KCSNDTCISSC
Trigger: GCAGCTTGAAATGCAGGTATCATTGGAACATTTCAAGATCATCAAATCAAATTCCACAGGGATTGGTGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417172.5
CDS CAA 72 bp ATCTCGGGGTGTAGATTAATTAAACGGTTCAAGGAGTaGTGCCCAAGAAGGATTTGTGAACATTTCCATTTC +
Preference number: 6 (lower is better)
Translates to: ISGCRLIKRFKE*CPRRICEHFHF
Trigger: GAAATGGAAATGTTCACAAATCCTTCTTGGGCACAACTCCTTGAACCGTTTAATTAATCTACACCCCGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS TCA 72 bp ATTGTAAATTGGGTTGACATTAGTGTATACCTCCTGTaGGCCTTTATGCAAAGAATCTCGGGGTGTAGATTA +
Preference number: 6 (lower is better)
Translates to: IVNWVDISVYLL*AFMQRISGCRL
Trigger: TAATCTACACCCCGAGATTCTTTGCATAAAGGCTCACAGGAGGTATACACTAATGTCAACCCAATTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 72 bp ACATATGGGTTCCCAATAGGCAACATACATATTCTTTaGGGAATAAGTTTAGGGGTGCTCTTGACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: TYGFPIGNIHIL*GISLGVLLTKK
Trigger: CTTCTTTGTCAAGAGCACCCCTAAACTTATTCCCAAAAGAATATGTATGTTGCCTATTGGGAACCCATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 72 bp TGGTCACCAATCCCTGTGGAATTTGATTTGATGATCTaGAAATGTTCCAATGATACCTTGCTGAATGCACAT +
Preference number: 6 (lower is better)
Translates to: WSPIPVEFDLMI*KCSNDTLLNAH
Trigger: ATGTGCATTCAGCAAGGTATCATTGGAACATTTCAAGATCATCAAATCAAATTCCACAGGGATTGGTGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498254.5
CDS CAA 90 bp ATGCAAAGAATCTCGGGGTGTAGATTAATTAAACGGTTCAAGGAGTaGTGCCCAAGAAGGATTTGTGAACATTTCCATTTCTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: MQRISGCRLIKRFKE*CPRRICEHFHFFLF
Trigger: AAAAAGGAAGAAATGGAAATGTTCACAAATCCTTCTTGGGCACAACTCCTTGAACCGTTTAATTAATCTACACCCCGAGATTCTTTGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS GCA 72 bp TGCTTTTTCTTCTGCTTCAATTCTTGCTCGTTCATCTaGTATCTTTTTGTCTTGCTCGGCTTTAATTCTTTC +
Preference number: 6 (lower is better)
Translates to: CFFFCFNSCSFI*YLFVLLGFNSF
Trigger: GAAAGAATTAAAGCCGAGCAAGACAAAAAGATAGCAGATGAACGAGCAAGAATTGAAGCAGAAGAAAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361675.7
CDS CAA 72 bp TTAACAGGGAAAGCTCAGCAATATACAGTGGGGAGCTaGATACGTTTTCTTATTATAATGACAAATGCAAGC +
Preference number: 6 (lower is better)
Translates to: LTGKAQQYTVGS*IRFLIIMTNAS
Trigger: GCTTGCATTTGTCATTATAATAAGAAAACGTATCAAGCTCCCCACTGTATATTGCTGAGCTTTCCCTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CAA 90 bp AAAGCAAACTTAACAGGGAAAGCTCAGCAATATACAGTGGGGAGCTaGATACGTTTTCTTATTATAATGACAAATGCAAGCAATTGTCGT +
Preference number: 6 (lower is better)
Translates to: KANLTGKAQQYTVGS*IRFLIIMTNASNCR
Trigger: ACGACAATTGCTTGCATTTGTCATTATAATAAGAAAACGTATCAAGCTCCCCACTGTATATTGCTGAGCTTTCCCTGTTAAGTTTGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482470.5
CDS CCA 72 bp TTCAAGCTGAAAGTATTCTCAGTATGTTTAAGTTTGTaGGTCATGAATTCTCCATTCTGCGACTTAACTTCT +
Preference number: 6 (lower is better)
Translates to: FKLKVFSVCLSL*VMNSPFCDLTS
Trigger: AGAAGTTAAGTCGCAGAATGGAGAATTCATGACCCACAAACTTAAACATACTGAGAATACTTTCAGCTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478075.1